Multiple sequence alignment - TraesCS7A01G110700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G110700 chr7A 100.000 7338 0 0 1 7338 67983029 67990366 0.000000e+00 13551.0
1 TraesCS7A01G110700 chr7A 89.820 3340 311 18 1900 5220 68028980 68032309 0.000000e+00 4257.0
2 TraesCS7A01G110700 chr7A 87.655 3386 361 33 2104 5459 68043135 68046493 0.000000e+00 3884.0
3 TraesCS7A01G110700 chr7A 97.810 2055 32 5 39 2089 67595081 67593036 0.000000e+00 3533.0
4 TraesCS7A01G110700 chr7A 99.009 1716 17 0 2081 3796 67593008 67591293 0.000000e+00 3075.0
5 TraesCS7A01G110700 chr7A 90.093 2261 210 11 3217 5473 68083599 68085849 0.000000e+00 2922.0
6 TraesCS7A01G110700 chr7A 80.904 3718 558 87 2075 5717 68022469 68026109 0.000000e+00 2793.0
7 TraesCS7A01G110700 chr7A 96.280 914 31 3 2081 2993 68077078 68077989 0.000000e+00 1496.0
8 TraesCS7A01G110700 chr7A 81.976 577 52 31 5285 5825 68037597 68038157 6.760000e-120 442.0
9 TraesCS7A01G110700 chr7A 83.333 522 42 22 6818 7338 68086955 68087432 2.430000e-119 440.0
10 TraesCS7A01G110700 chr7A 83.140 516 43 19 6826 7338 68039346 68039820 1.460000e-116 431.0
11 TraesCS7A01G110700 chr7A 83.863 409 38 12 1697 2088 68076652 68077049 1.500000e-96 364.0
12 TraesCS7A01G110700 chr7A 89.593 221 17 3 5557 5777 68085859 68086073 7.250000e-70 276.0
13 TraesCS7A01G110700 chr7A 82.533 229 22 8 1457 1671 68076474 68076698 1.260000e-42 185.0
14 TraesCS7A01G110700 chr7A 90.361 83 8 0 1364 1446 68076334 68076416 7.780000e-20 110.0
15 TraesCS7A01G110700 chr7A 98.333 60 1 0 6036 6095 67989003 67989062 1.010000e-18 106.0
16 TraesCS7A01G110700 chr7A 98.333 60 1 0 5975 6034 67989064 67989123 1.010000e-18 106.0
17 TraesCS7A01G110700 chr7A 95.455 44 2 0 1628 1671 67593425 67593382 3.670000e-08 71.3
18 TraesCS7A01G110700 chr7A 100.000 38 0 0 1 38 67595282 67595245 3.670000e-08 71.3
19 TraesCS7A01G110700 chr7D 89.295 3830 311 39 2082 5875 64245415 64249181 0.000000e+00 4710.0
20 TraesCS7A01G110700 chr7D 89.463 3540 300 47 2081 5581 64265789 64269294 0.000000e+00 4403.0
21 TraesCS7A01G110700 chr7D 91.714 2281 185 4 2098 4376 64222837 64225115 0.000000e+00 3162.0
22 TraesCS7A01G110700 chr7D 91.383 2205 167 12 3038 5228 59938446 59936251 0.000000e+00 2998.0
23 TraesCS7A01G110700 chr7D 92.562 968 72 0 2081 3048 59939562 59938595 0.000000e+00 1389.0
24 TraesCS7A01G110700 chr7D 83.046 1162 99 44 978 2089 64264648 64265761 0.000000e+00 965.0
25 TraesCS7A01G110700 chr7D 78.835 1030 189 22 4207 5220 59905961 59904945 0.000000e+00 667.0
26 TraesCS7A01G110700 chr7D 88.358 335 29 4 7005 7338 64270602 64270927 1.920000e-105 394.0
27 TraesCS7A01G110700 chr7D 79.406 539 70 33 5111 5626 64261018 64261538 7.050000e-90 342.0
28 TraesCS7A01G110700 chr7D 80.994 463 45 16 1003 1446 64244350 64244788 1.970000e-85 327.0
29 TraesCS7A01G110700 chr7D 76.524 328 43 18 1350 1661 59940359 59940050 1.650000e-31 148.0
30 TraesCS7A01G110700 chr7D 82.278 158 13 7 916 1073 64221952 64222094 1.000000e-23 122.0
31 TraesCS7A01G110700 chr7D 84.158 101 15 1 5774 5873 59946926 59946826 6.060000e-16 97.1
32 TraesCS7A01G110700 chr7B 86.097 4366 437 77 1397 5715 5502519 5506761 0.000000e+00 4543.0
33 TraesCS7A01G110700 chr7B 90.431 3135 267 18 2082 5212 5216539 5219644 0.000000e+00 4096.0
34 TraesCS7A01G110700 chr7B 85.702 3595 436 52 2081 5626 5282115 5285680 0.000000e+00 3720.0
35 TraesCS7A01G110700 chr7B 88.884 2258 229 14 3268 5506 5338212 5340466 0.000000e+00 2760.0
36 TraesCS7A01G110700 chr7B 85.688 2173 269 32 3075 5218 5196647 5198806 0.000000e+00 2252.0
37 TraesCS7A01G110700 chr7B 87.221 1119 130 12 2082 3194 5337067 5338178 0.000000e+00 1262.0
38 TraesCS7A01G110700 chr7B 83.478 1150 91 53 978 2089 5316863 5317951 0.000000e+00 979.0
39 TraesCS7A01G110700 chr7B 78.773 1206 199 42 4184 5367 5271086 5272256 0.000000e+00 756.0
40 TraesCS7A01G110700 chr7B 89.700 466 32 7 1634 2089 5281631 5282090 1.370000e-161 580.0
41 TraesCS7A01G110700 chr7B 85.906 298 21 11 6262 6541 5273108 5273402 1.550000e-76 298.0
42 TraesCS7A01G110700 chr7B 87.500 256 32 0 4746 5001 5219675 5219930 5.570000e-76 296.0
43 TraesCS7A01G110700 chr7B 84.490 245 16 11 1340 1575 5281395 5281626 9.580000e-54 222.0
44 TraesCS7A01G110700 chr7B 83.682 239 21 11 878 1116 5194590 5194810 7.460000e-50 209.0
45 TraesCS7A01G110700 chr7B 86.585 164 10 9 6527 6689 5274581 5274733 3.520000e-38 171.0
46 TraesCS7A01G110700 chr7B 76.060 401 51 22 1044 1444 5336084 5336439 4.550000e-37 167.0
47 TraesCS7A01G110700 chr7B 92.593 108 7 1 7232 7338 5341924 5342031 3.550000e-33 154.0
48 TraesCS7A01G110700 chr7B 92.754 69 3 1 5872 5938 5272888 5272956 1.680000e-16 99.0
49 TraesCS7A01G110700 chr7B 89.552 67 5 2 5947 6012 5507288 5507353 4.720000e-12 84.2
50 TraesCS7A01G110700 chr7B 100.000 31 0 0 5805 5835 5506767 5506797 2.860000e-04 58.4
51 TraesCS7A01G110700 chr3D 92.815 849 57 2 36 880 16259985 16260833 0.000000e+00 1227.0
52 TraesCS7A01G110700 chr3D 91.677 841 70 0 36 876 302299305 302300145 0.000000e+00 1166.0
53 TraesCS7A01G110700 chr3D 96.774 31 1 0 6787 6817 302931366 302931396 1.300000e-02 52.8
54 TraesCS7A01G110700 chr2D 92.500 840 62 1 39 878 441534119 441534957 0.000000e+00 1201.0
55 TraesCS7A01G110700 chr2D 91.981 848 66 2 36 883 556946891 556947736 0.000000e+00 1188.0
56 TraesCS7A01G110700 chr2A 92.408 843 62 2 39 880 703883641 703882800 0.000000e+00 1201.0
57 TraesCS7A01G110700 chr2A 91.844 846 64 5 36 878 592464130 592464973 0.000000e+00 1175.0
58 TraesCS7A01G110700 chr5D 91.825 844 69 0 35 878 476614954 476614111 0.000000e+00 1177.0
59 TraesCS7A01G110700 chr6D 91.132 857 69 6 39 891 407228390 407227537 0.000000e+00 1155.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G110700 chr7A 67983029 67990366 7337 False 4587.666667 13551 98.888667 1 7338 3 chr7A.!!$F1 7337
1 TraesCS7A01G110700 chr7A 68022469 68032309 9840 False 3525.000000 4257 85.362000 1900 5717 2 chr7A.!!$F2 3817
2 TraesCS7A01G110700 chr7A 67591293 67595282 3989 True 1687.650000 3533 98.068500 1 3796 4 chr7A.!!$R1 3795
3 TraesCS7A01G110700 chr7A 68037597 68046493 8896 False 1585.666667 3884 84.257000 2104 7338 3 chr7A.!!$F3 5234
4 TraesCS7A01G110700 chr7A 68083599 68087432 3833 False 1212.666667 2922 87.673000 3217 7338 3 chr7A.!!$F5 4121
5 TraesCS7A01G110700 chr7A 68076334 68077989 1655 False 538.750000 1496 88.259250 1364 2993 4 chr7A.!!$F4 1629
6 TraesCS7A01G110700 chr7D 64244350 64249181 4831 False 2518.500000 4710 85.144500 1003 5875 2 chr7D.!!$F2 4872
7 TraesCS7A01G110700 chr7D 64221952 64225115 3163 False 1642.000000 3162 86.996000 916 4376 2 chr7D.!!$F1 3460
8 TraesCS7A01G110700 chr7D 64261018 64270927 9909 False 1526.000000 4403 85.068250 978 7338 4 chr7D.!!$F3 6360
9 TraesCS7A01G110700 chr7D 59936251 59940359 4108 True 1511.666667 2998 86.823000 1350 5228 3 chr7D.!!$R3 3878
10 TraesCS7A01G110700 chr7D 59904945 59905961 1016 True 667.000000 667 78.835000 4207 5220 1 chr7D.!!$R1 1013
11 TraesCS7A01G110700 chr7B 5216539 5219930 3391 False 2196.000000 4096 88.965500 2082 5212 2 chr7B.!!$F3 3130
12 TraesCS7A01G110700 chr7B 5502519 5507353 4834 False 1561.866667 4543 91.883000 1397 6012 3 chr7B.!!$F7 4615
13 TraesCS7A01G110700 chr7B 5281395 5285680 4285 False 1507.333333 3720 86.630667 1340 5626 3 chr7B.!!$F5 4286
14 TraesCS7A01G110700 chr7B 5194590 5198806 4216 False 1230.500000 2252 84.685000 878 5218 2 chr7B.!!$F2 4340
15 TraesCS7A01G110700 chr7B 5336084 5342031 5947 False 1085.750000 2760 86.189500 1044 7338 4 chr7B.!!$F6 6294
16 TraesCS7A01G110700 chr7B 5316863 5317951 1088 False 979.000000 979 83.478000 978 2089 1 chr7B.!!$F1 1111
17 TraesCS7A01G110700 chr7B 5271086 5274733 3647 False 331.000000 756 86.004500 4184 6689 4 chr7B.!!$F4 2505
18 TraesCS7A01G110700 chr3D 16259985 16260833 848 False 1227.000000 1227 92.815000 36 880 1 chr3D.!!$F1 844
19 TraesCS7A01G110700 chr3D 302299305 302300145 840 False 1166.000000 1166 91.677000 36 876 1 chr3D.!!$F2 840
20 TraesCS7A01G110700 chr2D 441534119 441534957 838 False 1201.000000 1201 92.500000 39 878 1 chr2D.!!$F1 839
21 TraesCS7A01G110700 chr2D 556946891 556947736 845 False 1188.000000 1188 91.981000 36 883 1 chr2D.!!$F2 847
22 TraesCS7A01G110700 chr2A 703882800 703883641 841 True 1201.000000 1201 92.408000 39 880 1 chr2A.!!$R1 841
23 TraesCS7A01G110700 chr2A 592464130 592464973 843 False 1175.000000 1175 91.844000 36 878 1 chr2A.!!$F1 842
24 TraesCS7A01G110700 chr5D 476614111 476614954 843 True 1177.000000 1177 91.825000 35 878 1 chr5D.!!$R1 843
25 TraesCS7A01G110700 chr6D 407227537 407228390 853 True 1155.000000 1155 91.132000 39 891 1 chr6D.!!$R1 852

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 606 2.607750 GGTCCTGTCCCCTCTGCA 60.608 66.667 0.00 0.00 0.00 4.41 F
656 826 3.291497 GGAGGGACTGCTAGTGTCT 57.709 57.895 14.49 0.66 45.87 3.41 F
2491 14870 3.603532 TCTAGTGCCATCAAAGAAGCTG 58.396 45.455 0.00 0.00 0.00 4.24 F
3374 15957 5.627780 GTGCTTTGTATAAAAACAACCTCCG 59.372 40.000 0.00 0.00 39.02 4.63 F
5043 17659 0.944386 TTCAGCGGTTTGAGTTCTGC 59.056 50.000 0.00 0.00 36.34 4.26 F
6048 19359 0.033405 TCACCTACCGGAAGAGAGGG 60.033 60.000 9.46 1.40 37.17 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1715 4540 6.806388 AATTTGTTTGGAAAAGCATGATCC 57.194 33.333 0.00 0.0 0.00 3.36 R
2491 14870 2.113243 AACTCCGTGGCAAGGTCCTC 62.113 60.000 19.02 0.0 0.00 3.71 R
3824 16407 0.106015 AAACCCTTCAGCAAGCCACT 60.106 50.000 0.00 0.0 0.00 4.00 R
5124 17740 0.391661 TGGAATTCTCACGCTCCAGC 60.392 55.000 5.23 0.0 32.97 4.85 R
6220 19531 0.029567 GCGACATCTCTACCTCCGTG 59.970 60.000 0.00 0.0 0.00 4.94 R
6856 21630 0.178068 TGCGCCTTTCTAGGATCACC 59.822 55.000 4.18 0.0 45.05 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 289 4.329545 GTTGGGAGCACGGCCAGA 62.330 66.667 2.24 0.00 0.00 3.86
441 606 2.607750 GGTCCTGTCCCCTCTGCA 60.608 66.667 0.00 0.00 0.00 4.41
656 826 3.291497 GGAGGGACTGCTAGTGTCT 57.709 57.895 14.49 0.66 45.87 3.41
2491 14870 3.603532 TCTAGTGCCATCAAAGAAGCTG 58.396 45.455 0.00 0.00 0.00 4.24
3374 15957 5.627780 GTGCTTTGTATAAAAACAACCTCCG 59.372 40.000 0.00 0.00 39.02 4.63
3518 16101 8.616076 CCATAGAAGAATATTTCAAAGCGAAGT 58.384 33.333 0.00 0.00 34.32 3.01
3601 16184 9.231297 GTGTACCATTAGCCATCATTACAATAT 57.769 33.333 0.00 0.00 0.00 1.28
3824 16407 5.901413 AAGAGAGATTGGCTGATATGGAA 57.099 39.130 0.00 0.00 0.00 3.53
4024 16607 6.973843 TCACTGTCAAATGAGGAGAATTTTG 58.026 36.000 0.00 0.00 0.00 2.44
4109 16692 8.233190 GCTATCACTTCATAATATCAAGGCAAC 58.767 37.037 0.00 0.00 0.00 4.17
4110 16693 9.276590 CTATCACTTCATAATATCAAGGCAACA 57.723 33.333 0.00 0.00 41.41 3.33
4122 16705 1.680338 AGGCAACAGTTCAGAACCAC 58.320 50.000 9.85 0.00 41.41 4.16
4130 16713 2.358898 CAGTTCAGAACCACCAGTTTGG 59.641 50.000 9.85 0.00 45.02 3.28
4230 16813 3.242381 GCTTTCAATTTTTGCGTGTGCTT 60.242 39.130 0.00 0.00 43.34 3.91
4252 16835 1.702182 TCTTGGAAATTGTGGCAGCA 58.298 45.000 0.00 0.00 0.00 4.41
4322 16905 2.523138 ACCTAAGGTACCTAGGGCTCAT 59.477 50.000 27.45 11.47 32.11 2.90
4324 16907 2.570386 AAGGTACCTAGGGCTCATGT 57.430 50.000 16.67 0.00 0.00 3.21
5041 17657 1.594331 GGTTCAGCGGTTTGAGTTCT 58.406 50.000 0.00 0.00 0.00 3.01
5043 17659 0.944386 TTCAGCGGTTTGAGTTCTGC 59.056 50.000 0.00 0.00 36.34 4.26
5124 17740 1.466167 CTCGAGCATGTTGAGGTTTGG 59.534 52.381 0.00 0.00 33.34 3.28
5207 17823 0.681175 GCACAAGCCCATCCAAAACT 59.319 50.000 0.00 0.00 33.58 2.66
5220 17973 2.962421 TCCAAAACTTCCCACCATTGAC 59.038 45.455 0.00 0.00 0.00 3.18
5232 17992 3.415212 CACCATTGACATCCTTGACTGT 58.585 45.455 0.00 0.00 0.00 3.55
5250 18017 1.242076 GTTGAGTGCTGACATGCCTT 58.758 50.000 0.00 0.00 0.00 4.35
5257 18024 2.282391 TGACATGCCTTTGCCGCT 60.282 55.556 0.00 0.00 36.33 5.52
5258 18025 1.002746 TGACATGCCTTTGCCGCTA 60.003 52.632 0.00 0.00 36.33 4.26
5299 18069 4.025040 TCTGAGCAACCATGAATTGTCT 57.975 40.909 10.29 8.20 0.00 3.41
5480 18303 3.670359 CGTCGCAATCACCAACAATTCAT 60.670 43.478 0.00 0.00 0.00 2.57
5513 18338 3.434940 ACTCCCAATAAACGAAGGCTT 57.565 42.857 0.00 0.00 0.00 4.35
5604 18440 5.363101 TCAGCTATTTACTTCTCCTGCATG 58.637 41.667 0.00 0.00 0.00 4.06
5640 18476 3.129462 GCAGCACCTCCTTTCCTTTATTC 59.871 47.826 0.00 0.00 0.00 1.75
5641 18477 4.335416 CAGCACCTCCTTTCCTTTATTCA 58.665 43.478 0.00 0.00 0.00 2.57
5643 18479 5.420104 CAGCACCTCCTTTCCTTTATTCATT 59.580 40.000 0.00 0.00 0.00 2.57
5644 18480 5.654209 AGCACCTCCTTTCCTTTATTCATTC 59.346 40.000 0.00 0.00 0.00 2.67
5645 18481 5.418840 GCACCTCCTTTCCTTTATTCATTCA 59.581 40.000 0.00 0.00 0.00 2.57
5646 18482 6.405176 GCACCTCCTTTCCTTTATTCATTCAG 60.405 42.308 0.00 0.00 0.00 3.02
5647 18483 6.660949 CACCTCCTTTCCTTTATTCATTCAGT 59.339 38.462 0.00 0.00 0.00 3.41
5648 18484 6.887002 ACCTCCTTTCCTTTATTCATTCAGTC 59.113 38.462 0.00 0.00 0.00 3.51
5649 18485 7.115414 CCTCCTTTCCTTTATTCATTCAGTCT 58.885 38.462 0.00 0.00 0.00 3.24
5650 18486 7.613411 CCTCCTTTCCTTTATTCATTCAGTCTT 59.387 37.037 0.00 0.00 0.00 3.01
5651 18487 8.940397 TCCTTTCCTTTATTCATTCAGTCTTT 57.060 30.769 0.00 0.00 0.00 2.52
5652 18488 9.367160 TCCTTTCCTTTATTCATTCAGTCTTTT 57.633 29.630 0.00 0.00 0.00 2.27
5702 18539 4.002982 TCAGTTGGCACTATTTGTAGCAG 58.997 43.478 0.00 0.00 0.00 4.24
5740 18577 6.541969 TGTATTTGATTGTTCACATACAGCG 58.458 36.000 9.68 0.00 44.60 5.18
5743 18580 3.658709 TGATTGTTCACATACAGCGTCA 58.341 40.909 0.00 0.00 0.00 4.35
5751 18588 5.029650 TCACATACAGCGTCATTTTGTTC 57.970 39.130 0.00 0.00 0.00 3.18
5835 18687 5.118817 GTCAAGACTCGTACAATGAAAGGTC 59.881 44.000 0.00 0.00 0.00 3.85
5882 19113 1.662629 AGATCTGCTTCATGTTTCGCG 59.337 47.619 0.00 0.00 0.00 5.87
5894 19134 1.342174 TGTTTCGCGTAACTCCCTCTT 59.658 47.619 25.57 0.00 0.00 2.85
5908 19150 0.601558 CCTCTTTCGGTTCGTCTGGA 59.398 55.000 0.00 0.00 0.00 3.86
5958 19268 9.645059 TTCAATCGATTATCTAGCTAGAAATGG 57.355 33.333 26.62 23.11 35.69 3.16
5991 19302 1.842381 AAACCGGAAGAGAGGGCCTG 61.842 60.000 12.95 0.00 0.00 4.85
5993 19304 1.764054 CCGGAAGAGAGGGCCTGAT 60.764 63.158 12.95 0.00 0.00 2.90
5999 19310 1.792115 AGAGAGGGCCTGATCAAGAG 58.208 55.000 12.95 0.00 0.00 2.85
6011 19322 4.392445 CCTGATCAAGAGCTCAAGAAGTTG 59.608 45.833 17.77 10.50 34.67 3.16
6012 19323 5.219343 TGATCAAGAGCTCAAGAAGTTGA 57.781 39.130 17.77 15.58 40.55 3.18
6022 19333 4.156455 TCAAGAAGTTGAGGAGCAAACT 57.844 40.909 0.00 0.00 37.79 2.66
6023 19334 4.130118 TCAAGAAGTTGAGGAGCAAACTC 58.870 43.478 0.00 0.00 37.79 3.01
6024 19335 4.133078 CAAGAAGTTGAGGAGCAAACTCT 58.867 43.478 4.36 0.00 38.26 3.24
6025 19336 3.737850 AGAAGTTGAGGAGCAAACTCTG 58.262 45.455 4.36 0.00 42.98 3.35
6026 19337 7.488805 CAAGAAGTTGAGGAGCAAACTCTGC 62.489 48.000 4.36 0.00 43.14 4.26
6038 19349 3.448686 CAAACTCTGCTATCACCTACCG 58.551 50.000 0.00 0.00 0.00 4.02
6039 19350 1.693627 ACTCTGCTATCACCTACCGG 58.306 55.000 0.00 0.00 0.00 5.28
6040 19351 1.214673 ACTCTGCTATCACCTACCGGA 59.785 52.381 9.46 0.00 0.00 5.14
6041 19352 2.307768 CTCTGCTATCACCTACCGGAA 58.692 52.381 9.46 0.00 0.00 4.30
6042 19353 2.294791 CTCTGCTATCACCTACCGGAAG 59.705 54.545 9.46 0.00 0.00 3.46
6043 19354 2.092049 TCTGCTATCACCTACCGGAAGA 60.092 50.000 9.46 0.00 0.00 2.87
6044 19355 2.294791 CTGCTATCACCTACCGGAAGAG 59.705 54.545 9.46 1.52 0.00 2.85
6045 19356 2.092049 TGCTATCACCTACCGGAAGAGA 60.092 50.000 9.46 0.00 0.00 3.10
6046 19357 2.554893 GCTATCACCTACCGGAAGAGAG 59.445 54.545 9.46 6.07 33.51 3.20
6047 19358 2.074729 ATCACCTACCGGAAGAGAGG 57.925 55.000 9.46 9.00 38.35 3.69
6048 19359 0.033405 TCACCTACCGGAAGAGAGGG 60.033 60.000 9.46 1.40 37.17 4.30
6049 19360 1.381463 ACCTACCGGAAGAGAGGGC 60.381 63.158 9.46 0.00 37.17 5.19
6050 19361 2.134933 CCTACCGGAAGAGAGGGCC 61.135 68.421 9.46 0.00 0.00 5.80
6051 19362 1.075896 CTACCGGAAGAGAGGGCCT 60.076 63.158 9.46 5.25 0.00 5.19
6052 19363 1.381327 TACCGGAAGAGAGGGCCTG 60.381 63.158 12.95 0.00 0.00 4.85
6053 19364 1.870941 TACCGGAAGAGAGGGCCTGA 61.871 60.000 12.95 0.00 0.00 3.86
6054 19365 1.764054 CCGGAAGAGAGGGCCTGAT 60.764 63.158 12.95 0.00 0.00 2.90
6055 19366 1.745264 CGGAAGAGAGGGCCTGATC 59.255 63.158 12.95 9.30 0.00 2.92
6056 19367 1.045350 CGGAAGAGAGGGCCTGATCA 61.045 60.000 12.95 0.00 0.00 2.92
6057 19368 1.207791 GGAAGAGAGGGCCTGATCAA 58.792 55.000 12.95 0.00 0.00 2.57
6058 19369 1.140652 GGAAGAGAGGGCCTGATCAAG 59.859 57.143 12.95 0.00 0.00 3.02
6059 19370 2.114616 GAAGAGAGGGCCTGATCAAGA 58.885 52.381 12.95 0.00 0.00 3.02
6060 19371 1.792115 AGAGAGGGCCTGATCAAGAG 58.208 55.000 12.95 0.00 0.00 2.85
6061 19372 0.106521 GAGAGGGCCTGATCAAGAGC 59.893 60.000 12.95 0.00 0.00 4.09
6062 19373 1.227497 GAGGGCCTGATCAAGAGCG 60.227 63.158 12.95 0.00 0.00 5.03
6063 19374 2.899339 GGGCCTGATCAAGAGCGC 60.899 66.667 0.84 0.00 0.00 5.92
6064 19375 2.124983 GGCCTGATCAAGAGCGCA 60.125 61.111 11.47 0.00 0.00 6.09
6065 19376 1.746615 GGCCTGATCAAGAGCGCAA 60.747 57.895 11.47 0.00 0.00 4.85
6066 19377 1.712977 GGCCTGATCAAGAGCGCAAG 61.713 60.000 11.47 0.00 43.44 4.01
6067 19378 0.742281 GCCTGATCAAGAGCGCAAGA 60.742 55.000 11.47 1.23 43.02 3.02
6068 19379 1.730501 CCTGATCAAGAGCGCAAGAA 58.269 50.000 11.47 0.00 43.02 2.52
6069 19380 1.664659 CCTGATCAAGAGCGCAAGAAG 59.335 52.381 11.47 0.00 43.02 2.85
6070 19381 2.344950 CTGATCAAGAGCGCAAGAAGT 58.655 47.619 11.47 0.00 43.02 3.01
6071 19382 2.740981 CTGATCAAGAGCGCAAGAAGTT 59.259 45.455 11.47 0.00 43.02 2.66
6072 19383 2.481568 TGATCAAGAGCGCAAGAAGTTG 59.518 45.455 11.47 3.62 43.02 3.16
6073 19384 2.238942 TCAAGAGCGCAAGAAGTTGA 57.761 45.000 11.47 6.10 43.02 3.18
6074 19385 2.138320 TCAAGAGCGCAAGAAGTTGAG 58.862 47.619 11.47 0.00 43.02 3.02
6075 19386 1.196354 CAAGAGCGCAAGAAGTTGAGG 59.804 52.381 11.47 0.00 43.02 3.86
6076 19387 0.681733 AGAGCGCAAGAAGTTGAGGA 59.318 50.000 11.47 0.00 43.02 3.71
6077 19388 1.074752 GAGCGCAAGAAGTTGAGGAG 58.925 55.000 11.47 0.00 43.02 3.69
6078 19389 0.952984 AGCGCAAGAAGTTGAGGAGC 60.953 55.000 11.47 0.00 43.02 4.70
6079 19390 1.230635 GCGCAAGAAGTTGAGGAGCA 61.231 55.000 0.30 0.00 43.02 4.26
6080 19391 1.229428 CGCAAGAAGTTGAGGAGCAA 58.771 50.000 0.00 0.00 43.02 3.91
6081 19392 1.603802 CGCAAGAAGTTGAGGAGCAAA 59.396 47.619 0.00 0.00 37.75 3.68
6082 19393 2.603173 CGCAAGAAGTTGAGGAGCAAAC 60.603 50.000 0.00 0.00 37.75 2.93
6083 19394 2.620585 GCAAGAAGTTGAGGAGCAAACT 59.379 45.455 0.00 0.00 38.44 2.66
6084 19395 3.304324 GCAAGAAGTTGAGGAGCAAACTC 60.304 47.826 0.00 0.00 38.44 3.01
6085 19396 4.133078 CAAGAAGTTGAGGAGCAAACTCT 58.867 43.478 4.36 0.00 38.26 3.24
6086 19397 3.737850 AGAAGTTGAGGAGCAAACTCTG 58.262 45.455 4.36 0.00 42.98 3.35
6087 19398 7.488805 CAAGAAGTTGAGGAGCAAACTCTGC 62.489 48.000 4.36 0.00 43.14 4.26
6097 19408 2.672961 CAAACTCTGCTATCACCCGA 57.327 50.000 0.00 0.00 0.00 5.14
6098 19409 2.271800 CAAACTCTGCTATCACCCGAC 58.728 52.381 0.00 0.00 0.00 4.79
6099 19410 0.824759 AACTCTGCTATCACCCGACC 59.175 55.000 0.00 0.00 0.00 4.79
6100 19411 1.043673 ACTCTGCTATCACCCGACCC 61.044 60.000 0.00 0.00 0.00 4.46
6101 19412 2.076622 CTCTGCTATCACCCGACCCG 62.077 65.000 0.00 0.00 0.00 5.28
6125 19436 3.733960 CAGTCGCCGTGGTCGAGA 61.734 66.667 5.82 0.00 39.71 4.04
6126 19437 2.981909 AGTCGCCGTGGTCGAGAA 60.982 61.111 5.82 0.00 39.71 2.87
6127 19438 2.804090 GTCGCCGTGGTCGAGAAC 60.804 66.667 5.82 0.00 39.71 3.01
6128 19439 3.289062 TCGCCGTGGTCGAGAACA 61.289 61.111 0.00 0.00 39.71 3.18
6129 19440 2.355363 CGCCGTGGTCGAGAACAA 60.355 61.111 0.00 0.00 39.71 2.83
6130 19441 1.952133 CGCCGTGGTCGAGAACAAA 60.952 57.895 0.00 0.00 39.71 2.83
6131 19442 1.289109 CGCCGTGGTCGAGAACAAAT 61.289 55.000 0.00 0.00 39.71 2.32
6132 19443 0.872388 GCCGTGGTCGAGAACAAATT 59.128 50.000 0.00 0.00 39.71 1.82
6133 19444 1.136057 GCCGTGGTCGAGAACAAATTC 60.136 52.381 0.00 0.00 39.71 2.17
6135 19446 2.157668 CCGTGGTCGAGAACAAATTCTG 59.842 50.000 0.00 0.00 45.60 3.02
6136 19447 3.057019 CGTGGTCGAGAACAAATTCTGA 58.943 45.455 0.00 0.00 45.60 3.27
6137 19448 3.493129 CGTGGTCGAGAACAAATTCTGAA 59.507 43.478 0.00 0.00 45.60 3.02
6138 19449 4.152402 CGTGGTCGAGAACAAATTCTGAAT 59.848 41.667 0.00 0.00 45.60 2.57
6139 19450 5.622378 GTGGTCGAGAACAAATTCTGAATC 58.378 41.667 2.92 0.00 45.60 2.52
6140 19451 5.409826 GTGGTCGAGAACAAATTCTGAATCT 59.590 40.000 2.92 0.00 45.60 2.40
6141 19452 5.639506 TGGTCGAGAACAAATTCTGAATCTC 59.360 40.000 2.92 5.73 45.60 2.75
6142 19453 5.872070 GGTCGAGAACAAATTCTGAATCTCT 59.128 40.000 13.22 9.05 45.60 3.10
6143 19454 6.183360 GGTCGAGAACAAATTCTGAATCTCTG 60.183 42.308 13.22 9.60 45.60 3.35
6144 19455 5.349817 TCGAGAACAAATTCTGAATCTCTGC 59.650 40.000 13.22 2.07 45.60 4.26
6145 19456 5.350914 CGAGAACAAATTCTGAATCTCTGCT 59.649 40.000 13.22 5.86 45.60 4.24
6146 19457 6.128336 CGAGAACAAATTCTGAATCTCTGCTT 60.128 38.462 13.22 0.00 45.60 3.91
6147 19458 6.910995 AGAACAAATTCTGAATCTCTGCTTG 58.089 36.000 2.92 6.09 43.86 4.01
6148 19459 5.056894 ACAAATTCTGAATCTCTGCTTGC 57.943 39.130 2.92 0.00 0.00 4.01
6149 19460 4.521639 ACAAATTCTGAATCTCTGCTTGCA 59.478 37.500 2.92 0.00 0.00 4.08
6150 19461 4.698583 AATTCTGAATCTCTGCTTGCAC 57.301 40.909 2.92 0.00 0.00 4.57
6151 19462 2.845363 TCTGAATCTCTGCTTGCACA 57.155 45.000 0.00 0.00 0.00 4.57
6152 19463 2.696506 TCTGAATCTCTGCTTGCACAG 58.303 47.619 0.00 0.00 39.12 3.66
6153 19464 1.738350 CTGAATCTCTGCTTGCACAGG 59.262 52.381 4.64 0.00 38.26 4.00
6154 19465 0.450983 GAATCTCTGCTTGCACAGGC 59.549 55.000 4.64 0.00 38.26 4.85
6170 19481 2.658268 GCAACGGCCACAAGCAAC 60.658 61.111 2.24 0.00 46.50 4.17
6171 19482 2.353376 CAACGGCCACAAGCAACG 60.353 61.111 2.24 0.00 46.50 4.10
6172 19483 3.591835 AACGGCCACAAGCAACGG 61.592 61.111 2.24 0.00 46.50 4.44
6176 19487 4.645921 GCCACAAGCAACGGCCAC 62.646 66.667 2.24 0.00 42.56 5.01
6177 19488 3.215568 CCACAAGCAACGGCCACA 61.216 61.111 2.24 0.00 42.56 4.17
6178 19489 2.780094 CCACAAGCAACGGCCACAA 61.780 57.895 2.24 0.00 42.56 3.33
6179 19490 1.299316 CACAAGCAACGGCCACAAG 60.299 57.895 2.24 0.00 42.56 3.16
6180 19491 2.355009 CAAGCAACGGCCACAAGC 60.355 61.111 2.24 0.08 42.56 4.01
6181 19492 2.832661 AAGCAACGGCCACAAGCA 60.833 55.556 2.24 0.00 46.50 3.91
6182 19493 2.848858 AAGCAACGGCCACAAGCAG 61.849 57.895 2.24 0.00 46.50 4.24
6192 19503 4.787871 ACAAGCAGTGTGGAGCTC 57.212 55.556 4.71 4.71 40.90 4.09
6193 19504 2.140405 ACAAGCAGTGTGGAGCTCT 58.860 52.632 14.64 0.00 40.90 4.09
6194 19505 0.471617 ACAAGCAGTGTGGAGCTCTT 59.528 50.000 14.64 0.00 40.90 2.85
6195 19506 1.155042 CAAGCAGTGTGGAGCTCTTC 58.845 55.000 14.64 7.66 40.90 2.87
6196 19507 0.761187 AAGCAGTGTGGAGCTCTTCA 59.239 50.000 14.64 10.26 40.90 3.02
6197 19508 0.034616 AGCAGTGTGGAGCTCTTCAC 59.965 55.000 23.75 23.75 36.00 3.18
6198 19509 0.250038 GCAGTGTGGAGCTCTTCACA 60.250 55.000 28.68 24.31 41.01 3.58
6199 19510 1.793258 CAGTGTGGAGCTCTTCACAG 58.207 55.000 28.68 22.16 43.45 3.66
6200 19511 0.683973 AGTGTGGAGCTCTTCACAGG 59.316 55.000 28.68 0.00 43.45 4.00
6201 19512 0.952984 GTGTGGAGCTCTTCACAGGC 60.953 60.000 21.61 10.67 43.45 4.85
6202 19513 1.372683 GTGGAGCTCTTCACAGGCA 59.627 57.895 14.64 0.00 34.32 4.75
6203 19514 0.250467 GTGGAGCTCTTCACAGGCAA 60.250 55.000 14.64 0.00 34.32 4.52
6204 19515 0.250467 TGGAGCTCTTCACAGGCAAC 60.250 55.000 14.64 0.00 0.00 4.17
6205 19516 1.294659 GGAGCTCTTCACAGGCAACG 61.295 60.000 14.64 0.00 46.39 4.10
6206 19517 1.294659 GAGCTCTTCACAGGCAACGG 61.295 60.000 6.43 0.00 46.39 4.44
6207 19518 2.970974 GCTCTTCACAGGCAACGGC 61.971 63.158 0.00 0.00 46.39 5.68
6223 19534 4.633980 GCCACAAGCCTTTTCACG 57.366 55.556 0.00 0.00 34.35 4.35
6224 19535 1.007387 GCCACAAGCCTTTTCACGG 60.007 57.895 0.00 0.00 34.35 4.94
6225 19536 1.452145 GCCACAAGCCTTTTCACGGA 61.452 55.000 0.00 0.00 34.35 4.69
6226 19537 0.593128 CCACAAGCCTTTTCACGGAG 59.407 55.000 0.00 0.00 0.00 4.63
6227 19538 0.593128 CACAAGCCTTTTCACGGAGG 59.407 55.000 0.00 0.00 36.09 4.30
6228 19539 0.182775 ACAAGCCTTTTCACGGAGGT 59.817 50.000 0.00 0.00 35.42 3.85
6229 19540 1.418637 ACAAGCCTTTTCACGGAGGTA 59.581 47.619 0.00 0.00 35.42 3.08
6230 19541 2.076863 CAAGCCTTTTCACGGAGGTAG 58.923 52.381 0.00 0.00 35.42 3.18
6231 19542 1.640917 AGCCTTTTCACGGAGGTAGA 58.359 50.000 0.00 0.00 35.42 2.59
6232 19543 1.550976 AGCCTTTTCACGGAGGTAGAG 59.449 52.381 0.00 0.00 35.42 2.43
6233 19544 1.549170 GCCTTTTCACGGAGGTAGAGA 59.451 52.381 0.00 0.00 35.42 3.10
6234 19545 2.168728 GCCTTTTCACGGAGGTAGAGAT 59.831 50.000 0.00 0.00 35.42 2.75
6235 19546 3.786635 CCTTTTCACGGAGGTAGAGATG 58.213 50.000 0.00 0.00 0.00 2.90
6236 19547 3.195825 CCTTTTCACGGAGGTAGAGATGT 59.804 47.826 0.00 0.00 0.00 3.06
6237 19548 4.425520 CTTTTCACGGAGGTAGAGATGTC 58.574 47.826 0.00 0.00 0.00 3.06
6238 19549 1.664873 TCACGGAGGTAGAGATGTCG 58.335 55.000 0.00 0.00 0.00 4.35
6239 19550 0.029567 CACGGAGGTAGAGATGTCGC 59.970 60.000 0.00 0.00 0.00 5.19
6240 19551 0.393944 ACGGAGGTAGAGATGTCGCA 60.394 55.000 0.00 0.00 0.00 5.10
6241 19552 0.309302 CGGAGGTAGAGATGTCGCAG 59.691 60.000 0.00 0.00 0.00 5.18
6242 19553 0.031449 GGAGGTAGAGATGTCGCAGC 59.969 60.000 0.00 0.00 0.00 5.25
6243 19554 1.028905 GAGGTAGAGATGTCGCAGCT 58.971 55.000 0.00 0.00 30.65 4.24
6244 19555 1.001815 GAGGTAGAGATGTCGCAGCTC 60.002 57.143 14.54 14.54 45.85 4.09
6249 19560 2.686558 GAGATGTCGCAGCTCTCTAG 57.313 55.000 14.92 0.00 42.72 2.43
6250 19561 2.217750 GAGATGTCGCAGCTCTCTAGA 58.782 52.381 14.92 0.00 42.72 2.43
6251 19562 2.221169 AGATGTCGCAGCTCTCTAGAG 58.779 52.381 13.98 13.98 44.75 2.43
6252 19563 1.266718 GATGTCGCAGCTCTCTAGAGG 59.733 57.143 19.67 11.30 42.29 3.69
6253 19564 1.358759 GTCGCAGCTCTCTAGAGGC 59.641 63.158 19.67 19.69 42.29 4.70
6254 19565 1.826054 TCGCAGCTCTCTAGAGGCC 60.826 63.158 19.67 10.65 42.29 5.19
6255 19566 2.855514 CGCAGCTCTCTAGAGGCCC 61.856 68.421 19.67 13.34 42.29 5.80
6256 19567 2.506957 GCAGCTCTCTAGAGGCCCC 61.507 68.421 19.67 11.11 42.29 5.80
6257 19568 1.232792 CAGCTCTCTAGAGGCCCCT 59.767 63.158 19.67 0.00 42.29 4.79
6258 19569 0.827507 CAGCTCTCTAGAGGCCCCTC 60.828 65.000 19.67 6.20 42.29 4.30
6272 19583 0.674895 CCCCTCTCAAGCCGAGTTTG 60.675 60.000 1.01 0.00 42.88 2.93
6322 19636 2.223525 GGAATCTCTCCTGACCGTAACG 60.224 54.545 0.00 0.00 41.61 3.18
6337 19651 1.815817 TAACGCACTCTGGCTCTGCA 61.816 55.000 0.00 0.00 0.00 4.41
6340 19654 3.117171 CACTCTGGCTCTGCACGC 61.117 66.667 0.00 0.00 0.00 5.34
6350 19675 1.495878 CTCTGCACGCTCATACATCC 58.504 55.000 0.00 0.00 0.00 3.51
6361 19686 4.816385 CGCTCATACATCCACCTTGTAATT 59.184 41.667 0.00 0.00 33.55 1.40
6364 19689 5.690865 TCATACATCCACCTTGTAATTCCC 58.309 41.667 0.00 0.00 33.55 3.97
6381 19706 1.069765 CCTGCGTGGTTGAGTGAGT 59.930 57.895 0.00 0.00 0.00 3.41
6384 19709 0.813610 TGCGTGGTTGAGTGAGTTGG 60.814 55.000 0.00 0.00 0.00 3.77
6446 19771 6.264744 GGCTAATTTACAGAGGAATAAACCCC 59.735 42.308 0.00 0.00 0.00 4.95
6447 19772 6.831868 GCTAATTTACAGAGGAATAAACCCCA 59.168 38.462 0.00 0.00 0.00 4.96
6449 19774 4.579647 TTACAGAGGAATAAACCCCACC 57.420 45.455 0.00 0.00 0.00 4.61
6480 19856 4.200838 TGTTACAAGATGATTGCCTCGA 57.799 40.909 0.00 0.00 0.00 4.04
6482 19858 2.768253 ACAAGATGATTGCCTCGACA 57.232 45.000 0.00 0.00 0.00 4.35
6483 19859 2.625737 ACAAGATGATTGCCTCGACAG 58.374 47.619 0.00 0.00 0.00 3.51
6484 19860 2.234661 ACAAGATGATTGCCTCGACAGA 59.765 45.455 0.00 0.00 0.00 3.41
6485 19861 3.264947 CAAGATGATTGCCTCGACAGAA 58.735 45.455 0.00 0.00 0.00 3.02
6513 19889 3.308512 TGCGATTAGGCAGGCTCA 58.691 55.556 0.00 0.00 38.17 4.26
6529 19905 1.532868 GCTCATGGCGATGGTTGATAC 59.467 52.381 8.98 0.00 0.00 2.24
6546 19922 6.703607 GGTTGATACCACTACTGATCTTCATG 59.296 42.308 0.00 0.00 44.36 3.07
6562 19959 6.688637 TCTTCATGCAATATTGTTGAGAGG 57.311 37.500 16.61 10.11 0.00 3.69
6564 19961 6.317140 TCTTCATGCAATATTGTTGAGAGGTC 59.683 38.462 16.61 0.00 0.00 3.85
6571 19968 1.423584 TTGTTGAGAGGTCCTGCTGA 58.576 50.000 0.00 0.00 0.00 4.26
6578 19975 5.241403 TGAGAGGTCCTGCTGAAAATAAA 57.759 39.130 0.00 0.00 0.00 1.40
6581 19978 5.574188 AGAGGTCCTGCTGAAAATAAATGT 58.426 37.500 0.00 0.00 0.00 2.71
6582 19979 6.721318 AGAGGTCCTGCTGAAAATAAATGTA 58.279 36.000 0.00 0.00 0.00 2.29
6583 19980 6.599638 AGAGGTCCTGCTGAAAATAAATGTAC 59.400 38.462 0.00 0.00 0.00 2.90
6584 19981 5.652452 AGGTCCTGCTGAAAATAAATGTACC 59.348 40.000 0.00 0.00 0.00 3.34
6585 19982 5.448632 GGTCCTGCTGAAAATAAATGTACCG 60.449 44.000 0.00 0.00 0.00 4.02
6586 19983 4.095782 TCCTGCTGAAAATAAATGTACCGC 59.904 41.667 0.00 0.00 0.00 5.68
6587 19984 4.009798 TGCTGAAAATAAATGTACCGCG 57.990 40.909 0.00 0.00 0.00 6.46
6588 19985 2.781646 GCTGAAAATAAATGTACCGCGC 59.218 45.455 0.00 0.00 0.00 6.86
6589 19986 3.729462 GCTGAAAATAAATGTACCGCGCA 60.729 43.478 8.75 0.00 0.00 6.09
6590 19987 3.749404 TGAAAATAAATGTACCGCGCAC 58.251 40.909 8.75 0.44 0.00 5.34
6591 19988 3.188667 TGAAAATAAATGTACCGCGCACA 59.811 39.130 8.75 13.18 0.00 4.57
6592 19989 4.142578 TGAAAATAAATGTACCGCGCACAT 60.143 37.500 16.14 16.14 38.25 3.21
6593 19990 5.064834 TGAAAATAAATGTACCGCGCACATA 59.935 36.000 20.46 9.94 35.58 2.29
6594 19991 5.682943 AAATAAATGTACCGCGCACATAT 57.317 34.783 20.46 11.45 35.58 1.78
6595 19992 4.661993 ATAAATGTACCGCGCACATATG 57.338 40.909 20.46 0.00 35.58 1.78
6596 19993 2.232756 AATGTACCGCGCACATATGA 57.767 45.000 20.46 0.00 35.58 2.15
6597 19994 1.497991 ATGTACCGCGCACATATGAC 58.502 50.000 19.24 0.00 34.88 3.06
6598 19995 0.528901 TGTACCGCGCACATATGACC 60.529 55.000 10.38 0.00 0.00 4.02
6599 19996 0.249322 GTACCGCGCACATATGACCT 60.249 55.000 10.38 0.00 0.00 3.85
6600 19997 0.031585 TACCGCGCACATATGACCTC 59.968 55.000 10.38 0.00 0.00 3.85
6601 19998 1.227234 CCGCGCACATATGACCTCA 60.227 57.895 10.38 0.00 0.00 3.86
6602 19999 0.809636 CCGCGCACATATGACCTCAA 60.810 55.000 10.38 0.00 0.00 3.02
6603 20000 1.006086 CGCGCACATATGACCTCAAA 58.994 50.000 10.38 0.00 0.00 2.69
6604 20001 1.004610 CGCGCACATATGACCTCAAAG 60.005 52.381 10.38 0.00 0.00 2.77
6605 20002 1.331756 GCGCACATATGACCTCAAAGG 59.668 52.381 10.38 0.00 42.49 3.11
6617 20014 3.837213 CCTCAAAGGTTACATGTGCAG 57.163 47.619 9.11 0.00 0.00 4.41
6618 20015 2.095059 CCTCAAAGGTTACATGTGCAGC 60.095 50.000 9.11 4.75 0.00 5.25
6619 20016 1.885887 TCAAAGGTTACATGTGCAGCC 59.114 47.619 9.11 0.35 0.00 4.85
6620 20017 1.612950 CAAAGGTTACATGTGCAGCCA 59.387 47.619 9.11 0.00 0.00 4.75
6621 20018 1.993956 AAGGTTACATGTGCAGCCAA 58.006 45.000 9.11 0.00 0.00 4.52
6622 20019 1.538047 AGGTTACATGTGCAGCCAAG 58.462 50.000 9.11 0.00 0.00 3.61
6631 20028 4.771684 GCAGCCAAGTGCATAACG 57.228 55.556 0.00 0.00 43.41 3.18
6632 20029 1.137404 GCAGCCAAGTGCATAACGG 59.863 57.895 0.00 0.00 43.41 4.44
6637 20034 0.802494 CCAAGTGCATAACGGGTGAC 59.198 55.000 0.00 0.00 0.00 3.67
6653 20050 7.754851 ACGGGTGACTAAAACATAAGAAATT 57.245 32.000 0.00 0.00 0.00 1.82
6656 20053 9.769093 CGGGTGACTAAAACATAAGAAATTTAG 57.231 33.333 0.00 0.00 39.87 1.85
6668 20065 9.003658 ACATAAGAAATTTAGACCAACTCTGTG 57.996 33.333 0.00 0.00 0.00 3.66
6682 21426 5.652994 AACTCTGTGTTGCAAAAACCTTA 57.347 34.783 0.00 0.00 37.52 2.69
6686 21430 2.124122 GTGTTGCAAAAACCTTAGCGG 58.876 47.619 0.00 0.00 39.35 5.52
6703 21447 3.215245 GCCACAACAGCCAAACCA 58.785 55.556 0.00 0.00 0.00 3.67
6704 21448 1.747774 GCCACAACAGCCAAACCAT 59.252 52.632 0.00 0.00 0.00 3.55
6707 21451 1.270550 CCACAACAGCCAAACCATCTC 59.729 52.381 0.00 0.00 0.00 2.75
6709 21453 2.227388 CACAACAGCCAAACCATCTCTC 59.773 50.000 0.00 0.00 0.00 3.20
6714 21488 1.970917 GCCAAACCATCTCTCGCACG 61.971 60.000 0.00 0.00 0.00 5.34
6722 21496 2.159366 CCATCTCTCGCACGTACTTTCT 60.159 50.000 0.00 0.00 0.00 2.52
6727 21501 4.270566 TCTCTCGCACGTACTTTCTAGATC 59.729 45.833 0.00 0.00 0.00 2.75
6737 21511 8.331022 CACGTACTTTCTAGATCATCAAATTGG 58.669 37.037 0.00 0.00 0.00 3.16
6752 21526 9.460019 TCATCAAATTGGACTAATGTAATGTGA 57.540 29.630 0.00 0.00 32.90 3.58
6753 21527 9.726232 CATCAAATTGGACTAATGTAATGTGAG 57.274 33.333 0.00 0.00 32.14 3.51
6754 21528 7.761409 TCAAATTGGACTAATGTAATGTGAGC 58.239 34.615 0.00 0.00 0.00 4.26
6757 21531 8.438676 AATTGGACTAATGTAATGTGAGCTAC 57.561 34.615 0.00 0.00 0.00 3.58
6772 21546 7.558161 TGTGAGCTACATATCTTCAAAATGG 57.442 36.000 0.00 0.00 33.42 3.16
6773 21547 7.337938 TGTGAGCTACATATCTTCAAAATGGA 58.662 34.615 0.00 0.00 33.42 3.41
6775 21549 8.844244 GTGAGCTACATATCTTCAAAATGGATT 58.156 33.333 0.00 0.00 0.00 3.01
6786 21560 9.863650 ATCTTCAAAATGGATTAGATCATCACT 57.136 29.630 0.00 0.00 0.00 3.41
6787 21561 9.117183 TCTTCAAAATGGATTAGATCATCACTG 57.883 33.333 0.00 0.00 0.00 3.66
6788 21562 9.117183 CTTCAAAATGGATTAGATCATCACTGA 57.883 33.333 0.00 0.00 35.41 3.41
6789 21563 9.465199 TTCAAAATGGATTAGATCATCACTGAA 57.535 29.630 0.00 0.00 34.37 3.02
6793 21567 9.471702 AAATGGATTAGATCATCACTGAAAACT 57.528 29.630 0.00 0.00 34.37 2.66
6795 21569 7.050377 TGGATTAGATCATCACTGAAAACTCC 58.950 38.462 0.00 0.00 34.37 3.85
6796 21570 7.092712 TGGATTAGATCATCACTGAAAACTCCT 60.093 37.037 0.00 0.00 34.37 3.69
6798 21572 9.171877 GATTAGATCATCACTGAAAACTCCTTT 57.828 33.333 0.00 0.00 34.37 3.11
6799 21573 8.553459 TTAGATCATCACTGAAAACTCCTTTC 57.447 34.615 0.00 0.00 43.33 2.62
6800 21574 5.641209 AGATCATCACTGAAAACTCCTTTCG 59.359 40.000 0.00 0.00 45.59 3.46
6802 21576 5.364778 TCATCACTGAAAACTCCTTTCGAA 58.635 37.500 0.00 0.00 45.59 3.71
6803 21577 5.997746 TCATCACTGAAAACTCCTTTCGAAT 59.002 36.000 0.00 0.00 45.59 3.34
6804 21578 7.158697 TCATCACTGAAAACTCCTTTCGAATA 58.841 34.615 0.00 0.00 45.59 1.75
6805 21579 7.824289 TCATCACTGAAAACTCCTTTCGAATAT 59.176 33.333 0.00 0.00 45.59 1.28
6806 21580 7.364522 TCACTGAAAACTCCTTTCGAATATG 57.635 36.000 0.00 0.00 45.59 1.78
6807 21581 7.158697 TCACTGAAAACTCCTTTCGAATATGA 58.841 34.615 0.00 0.00 45.59 2.15
6808 21582 7.659799 TCACTGAAAACTCCTTTCGAATATGAA 59.340 33.333 0.00 0.00 45.59 2.57
6809 21583 8.454106 CACTGAAAACTCCTTTCGAATATGAAT 58.546 33.333 0.00 0.00 45.59 2.57
6811 21585 9.495754 CTGAAAACTCCTTTCGAATATGAATTC 57.504 33.333 0.00 0.00 45.59 2.17
6830 21604 9.950680 ATGAATTCGATGGTATATTTTTGTGAC 57.049 29.630 0.04 0.00 0.00 3.67
6831 21605 8.951243 TGAATTCGATGGTATATTTTTGTGACA 58.049 29.630 0.04 0.00 0.00 3.58
6832 21606 9.950680 GAATTCGATGGTATATTTTTGTGACAT 57.049 29.630 0.00 0.00 0.00 3.06
6859 21633 9.859427 ATAATACACATTTCAATCAAACTGGTG 57.141 29.630 0.00 0.00 33.32 4.17
6861 21635 6.409524 ACACATTTCAATCAAACTGGTGAT 57.590 33.333 0.00 0.00 40.01 3.06
6862 21636 6.449698 ACACATTTCAATCAAACTGGTGATC 58.550 36.000 0.00 0.00 37.25 2.92
6870 21676 6.881065 TCAATCAAACTGGTGATCCTAGAAAG 59.119 38.462 0.00 0.00 37.25 2.62
6873 21679 1.482593 ACTGGTGATCCTAGAAAGGCG 59.517 52.381 0.00 0.00 43.31 5.52
6880 21686 1.267121 TCCTAGAAAGGCGCAAGAGT 58.733 50.000 10.83 0.00 43.31 3.24
6884 21690 1.517242 AGAAAGGCGCAAGAGTCTTG 58.483 50.000 25.68 25.68 43.02 3.02
6891 21697 1.871039 GCGCAAGAGTCTTGTAAACCA 59.129 47.619 28.95 0.00 43.02 3.67
6905 21711 6.442541 TTGTAAACCAAGAGAATAGGGTCA 57.557 37.500 0.00 0.00 32.01 4.02
6906 21712 5.801380 TGTAAACCAAGAGAATAGGGTCAC 58.199 41.667 0.00 0.00 32.01 3.67
6907 21713 4.993705 AAACCAAGAGAATAGGGTCACA 57.006 40.909 0.00 0.00 32.01 3.58
6908 21714 3.983044 ACCAAGAGAATAGGGTCACAC 57.017 47.619 0.00 0.00 0.00 3.82
6909 21715 2.233922 ACCAAGAGAATAGGGTCACACG 59.766 50.000 0.00 0.00 0.00 4.49
6910 21716 2.496070 CCAAGAGAATAGGGTCACACGA 59.504 50.000 0.00 0.00 0.00 4.35
6911 21717 3.512680 CAAGAGAATAGGGTCACACGAC 58.487 50.000 0.00 0.00 41.80 4.34
6922 21728 3.717350 GTCACACGACCGAAAAATAGG 57.283 47.619 0.00 0.00 36.02 2.57
6923 21729 2.414138 GTCACACGACCGAAAAATAGGG 59.586 50.000 0.00 0.00 36.02 3.53
6924 21730 1.129811 CACACGACCGAAAAATAGGGC 59.870 52.381 0.00 0.00 0.00 5.19
6925 21731 0.730840 CACGACCGAAAAATAGGGCC 59.269 55.000 0.00 0.00 29.70 5.80
6926 21732 0.325602 ACGACCGAAAAATAGGGCCA 59.674 50.000 6.18 0.00 29.70 5.36
6931 21737 1.889829 CCGAAAAATAGGGCCACACAA 59.110 47.619 6.18 0.00 0.00 3.33
6934 21740 3.754323 CGAAAAATAGGGCCACACAACTA 59.246 43.478 6.18 0.00 0.00 2.24
6941 21747 1.336755 GGGCCACACAACTACAAACAG 59.663 52.381 4.39 0.00 0.00 3.16
6942 21748 1.269051 GGCCACACAACTACAAACAGC 60.269 52.381 0.00 0.00 0.00 4.40
6973 21779 2.673200 ATGGCCAGTCAGCGTCCAT 61.673 57.895 13.05 0.00 33.04 3.41
6974 21780 2.045926 GGCCAGTCAGCGTCCATT 60.046 61.111 0.00 0.00 0.00 3.16
6975 21781 1.220749 GGCCAGTCAGCGTCCATTA 59.779 57.895 0.00 0.00 0.00 1.90
6980 21786 2.002586 CAGTCAGCGTCCATTAACCAG 58.997 52.381 0.00 0.00 0.00 4.00
6984 21790 1.377987 GCGTCCATTAACCAGGGCA 60.378 57.895 0.00 0.00 0.00 5.36
6985 21791 0.963355 GCGTCCATTAACCAGGGCAA 60.963 55.000 0.00 0.00 0.00 4.52
6986 21792 0.808755 CGTCCATTAACCAGGGCAAC 59.191 55.000 0.00 0.00 0.00 4.17
6989 21795 2.831526 GTCCATTAACCAGGGCAACATT 59.168 45.455 0.00 0.00 39.74 2.71
6992 21798 3.181491 CCATTAACCAGGGCAACATTACG 60.181 47.826 0.00 0.00 39.74 3.18
6994 21800 1.582610 AACCAGGGCAACATTACGCG 61.583 55.000 3.53 3.53 39.74 6.01
6995 21801 1.743623 CCAGGGCAACATTACGCGA 60.744 57.895 15.93 0.00 39.74 5.87
6996 21802 1.302383 CCAGGGCAACATTACGCGAA 61.302 55.000 15.93 2.74 39.74 4.70
6997 21803 0.179200 CAGGGCAACATTACGCGAAC 60.179 55.000 15.93 0.00 39.74 3.95
6998 21804 0.604243 AGGGCAACATTACGCGAACA 60.604 50.000 15.93 0.00 39.74 3.18
6999 21805 0.453782 GGGCAACATTACGCGAACAC 60.454 55.000 15.93 0.00 39.74 3.32
7000 21806 0.236187 GGCAACATTACGCGAACACA 59.764 50.000 15.93 0.00 0.00 3.72
7001 21807 1.591248 GCAACATTACGCGAACACAG 58.409 50.000 15.93 0.00 0.00 3.66
7002 21808 1.070175 GCAACATTACGCGAACACAGT 60.070 47.619 15.93 0.00 0.00 3.55
7003 21809 2.601266 GCAACATTACGCGAACACAGTT 60.601 45.455 15.93 6.86 0.00 3.16
7004 21810 3.363182 GCAACATTACGCGAACACAGTTA 60.363 43.478 15.93 0.00 0.00 2.24
7005 21811 4.668177 GCAACATTACGCGAACACAGTTAT 60.668 41.667 15.93 0.00 0.00 1.89
7006 21812 5.444877 GCAACATTACGCGAACACAGTTATA 60.445 40.000 15.93 0.00 0.00 0.98
7008 21814 6.897259 ACATTACGCGAACACAGTTATAAT 57.103 33.333 15.93 0.00 0.00 1.28
7009 21815 6.929896 ACATTACGCGAACACAGTTATAATC 58.070 36.000 15.93 0.00 0.00 1.75
7010 21816 5.954434 TTACGCGAACACAGTTATAATCC 57.046 39.130 15.93 0.00 0.00 3.01
7011 21817 3.852286 ACGCGAACACAGTTATAATCCA 58.148 40.909 15.93 0.00 0.00 3.41
7013 21819 3.863424 CGCGAACACAGTTATAATCCAGT 59.137 43.478 0.00 0.00 0.00 4.00
7014 21820 4.026804 CGCGAACACAGTTATAATCCAGTC 60.027 45.833 0.00 0.00 0.00 3.51
7033 21839 1.337071 TCACCGTCAGTCAGAGTTCAC 59.663 52.381 0.00 0.00 0.00 3.18
7057 21863 8.956426 CACTAACCAGGACAACATTACATAATT 58.044 33.333 0.00 0.00 0.00 1.40
7063 21869 9.130661 CCAGGACAACATTACATAATTAATCCA 57.869 33.333 0.00 0.00 0.00 3.41
7106 21912 3.812156 TCTGAAGACGGTCACAGAAAA 57.188 42.857 24.63 11.05 36.63 2.29
7116 21922 1.398390 GTCACAGAAAATAGGCAGCCG 59.602 52.381 5.55 0.00 0.00 5.52
7118 21924 2.235155 TCACAGAAAATAGGCAGCCGTA 59.765 45.455 5.55 0.00 0.00 4.02
7146 21952 3.370276 GGACTATCGCTTCTTACGGAAC 58.630 50.000 0.00 0.00 0.00 3.62
7173 21979 5.620879 GCTGAAACATCTTTAAGCAGAAGGG 60.621 44.000 0.00 0.00 41.92 3.95
7216 22022 3.389741 GCACAAGCACAAGAATCCG 57.610 52.632 0.00 0.00 41.58 4.18
7307 22948 0.322456 TTCTCCGGGTGAGGCAATTG 60.322 55.000 0.00 0.00 41.76 2.32
7320 22961 3.420893 AGGCAATTGTTTACAGCTAGCA 58.579 40.909 18.83 0.00 0.00 3.49
7322 22963 4.463891 AGGCAATTGTTTACAGCTAGCAAT 59.536 37.500 18.83 6.74 0.00 3.56
7331 22972 7.891561 TGTTTACAGCTAGCAATATTTTTGGT 58.108 30.769 18.83 1.78 0.00 3.67
7332 22973 9.015367 TGTTTACAGCTAGCAATATTTTTGGTA 57.985 29.630 18.83 0.88 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 289 1.305046 CGGTACAGGGGGTCACTCT 60.305 63.158 0.00 0.00 0.00 3.24
179 344 2.742428 AGATATTGTGGTGGCTGCAT 57.258 45.000 0.50 0.00 0.00 3.96
441 606 2.110213 TCGCCGTCTTTGCTGGTT 59.890 55.556 0.00 0.00 0.00 3.67
462 627 2.304470 TGGTCATTGATCGGAGGTTTGA 59.696 45.455 0.00 0.00 0.00 2.69
476 644 2.279935 TGGCCGTAGTTTTGGTCATT 57.720 45.000 0.00 0.00 34.26 2.57
1715 4540 6.806388 AATTTGTTTGGAAAAGCATGATCC 57.194 33.333 0.00 0.00 0.00 3.36
2491 14870 2.113243 AACTCCGTGGCAAGGTCCTC 62.113 60.000 19.02 0.00 0.00 3.71
2955 15339 6.370442 TCCGAAATGTATACAAAAGGACACAG 59.630 38.462 10.14 0.00 0.00 3.66
3374 15957 3.681417 GGTTGTTGTGATTACCCGACTAC 59.319 47.826 0.00 0.00 0.00 2.73
3518 16101 5.775686 CTTGCAAATCTTCTGGACATTTCA 58.224 37.500 0.00 0.00 0.00 2.69
3601 16184 5.188988 TGGTTACTGACTAGAAGGCTAGA 57.811 43.478 6.92 0.00 45.71 2.43
3824 16407 0.106015 AAACCCTTCAGCAAGCCACT 60.106 50.000 0.00 0.00 0.00 4.00
3948 16531 1.466360 CGACAGGTTACTACGGTTCCG 60.466 57.143 9.81 9.81 0.00 4.30
3954 16537 5.813717 TCATGTATTCGACAGGTTACTACG 58.186 41.667 0.00 0.00 42.79 3.51
3963 16546 5.233225 AGCACCATATCATGTATTCGACAG 58.767 41.667 0.00 0.00 42.79 3.51
4043 16626 2.025981 AGATTAGGTGCATGCCACTGAA 60.026 45.455 16.68 11.28 44.08 3.02
4109 16692 2.358898 CCAAACTGGTGGTTCTGAACTG 59.641 50.000 19.05 7.64 37.12 3.16
4110 16693 2.654863 CCAAACTGGTGGTTCTGAACT 58.345 47.619 19.05 0.00 37.12 3.01
4122 16705 1.279271 AGGCTAGTGCTACCAAACTGG 59.721 52.381 0.00 0.00 40.63 4.00
4130 16713 3.433615 CACTTTTGACAGGCTAGTGCTAC 59.566 47.826 0.29 0.00 39.59 3.58
4175 16758 3.701542 TGGCAACCAATCACAAGTAACAA 59.298 39.130 0.00 0.00 0.00 2.83
4230 16813 2.231964 GCTGCCACAATTTCCAAGATCA 59.768 45.455 0.00 0.00 0.00 2.92
4252 16835 5.363939 GCTGATACCAGAGCTACTTTCATT 58.636 41.667 0.00 0.00 43.02 2.57
4322 16905 3.073678 AGTTCGCAAACATCTGCATACA 58.926 40.909 0.00 0.00 42.77 2.29
4324 16907 2.677836 GGAGTTCGCAAACATCTGCATA 59.322 45.455 0.00 0.00 42.77 3.14
4678 17279 1.875514 CATCAATCCGCCACCACTATG 59.124 52.381 0.00 0.00 0.00 2.23
5124 17740 0.391661 TGGAATTCTCACGCTCCAGC 60.392 55.000 5.23 0.00 32.97 4.85
5207 17823 2.378208 TCAAGGATGTCAATGGTGGGAA 59.622 45.455 0.00 0.00 0.00 3.97
5220 17973 2.483106 CAGCACTCAACAGTCAAGGATG 59.517 50.000 0.00 0.00 0.00 3.51
5232 17992 1.610038 CAAAGGCATGTCAGCACTCAA 59.390 47.619 0.00 0.00 35.83 3.02
5250 18017 2.112998 ACCATACCTTACTAGCGGCAA 58.887 47.619 1.45 0.00 0.00 4.52
5257 18024 9.961264 CTCAGATGAGTATACCATACCTTACTA 57.039 37.037 0.00 0.00 37.40 1.82
5258 18025 7.394923 GCTCAGATGAGTATACCATACCTTACT 59.605 40.741 11.31 0.00 43.85 2.24
5299 18069 5.941058 TGGTAATGAGCGTATTCAGGAAAAA 59.059 36.000 0.00 0.00 0.00 1.94
5487 18310 1.901159 TCGTTTATTGGGAGTTCCGGA 59.099 47.619 0.00 0.00 38.76 5.14
5491 18316 3.344515 AGCCTTCGTTTATTGGGAGTTC 58.655 45.455 0.00 0.00 0.00 3.01
5513 18338 6.769134 TCTGAACATACGTTGGAGAGAATA 57.231 37.500 0.00 0.00 34.75 1.75
5582 18410 5.007430 CACATGCAGGAGAAGTAAATAGCTG 59.993 44.000 4.84 0.00 0.00 4.24
5584 18412 4.260948 GCACATGCAGGAGAAGTAAATAGC 60.261 45.833 4.84 0.00 41.59 2.97
5592 18420 2.156917 TGAAAGCACATGCAGGAGAAG 58.843 47.619 4.84 0.00 45.16 2.85
5604 18440 0.029300 TGCTGCGTTTCTGAAAGCAC 59.971 50.000 17.36 15.08 43.65 4.40
5660 18496 9.248291 CAACTGAATGCAAACTTTTATTGTACT 57.752 29.630 0.00 0.00 0.00 2.73
5673 18510 4.870123 AATAGTGCCAACTGAATGCAAA 57.130 36.364 0.00 0.00 37.19 3.68
5702 18539 4.990257 TCAAATACACGTAGAGGCAGTAC 58.010 43.478 0.00 0.00 0.00 2.73
5835 18687 1.237285 CGGCTGGAGTTCAACCAAGG 61.237 60.000 0.00 0.00 36.95 3.61
5866 18833 2.157668 AGTTACGCGAAACATGAAGCAG 59.842 45.455 15.93 0.00 0.00 4.24
5882 19113 2.029560 ACGAACCGAAAGAGGGAGTTAC 60.030 50.000 0.00 0.00 35.02 2.50
5894 19134 1.067142 CCAGAATCCAGACGAACCGAA 60.067 52.381 0.00 0.00 0.00 4.30
5938 19189 5.724328 TGCCCATTTCTAGCTAGATAATCG 58.276 41.667 23.81 16.50 31.40 3.34
5941 19192 6.183361 ACACATGCCCATTTCTAGCTAGATAA 60.183 38.462 23.81 19.07 31.40 1.75
5943 19194 4.103785 ACACATGCCCATTTCTAGCTAGAT 59.896 41.667 23.81 7.68 31.40 1.98
5944 19195 3.455910 ACACATGCCCATTTCTAGCTAGA 59.544 43.478 19.72 19.72 0.00 2.43
5945 19196 3.812053 GACACATGCCCATTTCTAGCTAG 59.188 47.826 15.01 15.01 0.00 3.42
5948 19199 2.615912 GAGACACATGCCCATTTCTAGC 59.384 50.000 0.00 0.00 0.00 3.42
5958 19268 1.670811 CCGGTTTATGAGACACATGCC 59.329 52.381 0.00 0.00 39.77 4.40
5991 19302 5.783100 CTCAACTTCTTGAGCTCTTGATC 57.217 43.478 16.19 0.00 45.43 2.92
6017 19328 3.448686 CGGTAGGTGATAGCAGAGTTTG 58.551 50.000 0.00 0.00 0.00 2.93
6018 19329 2.431057 CCGGTAGGTGATAGCAGAGTTT 59.569 50.000 0.00 0.00 0.00 2.66
6020 19331 1.214673 TCCGGTAGGTGATAGCAGAGT 59.785 52.381 0.00 0.00 39.05 3.24
6021 19332 1.982660 TCCGGTAGGTGATAGCAGAG 58.017 55.000 0.00 0.00 39.05 3.35
6022 19333 2.092049 TCTTCCGGTAGGTGATAGCAGA 60.092 50.000 8.37 0.00 39.05 4.26
6023 19334 2.294791 CTCTTCCGGTAGGTGATAGCAG 59.705 54.545 8.37 0.00 39.05 4.24
6024 19335 2.092049 TCTCTTCCGGTAGGTGATAGCA 60.092 50.000 8.37 0.00 39.05 3.49
6025 19336 2.554893 CTCTCTTCCGGTAGGTGATAGC 59.445 54.545 8.37 0.00 39.05 2.97
6026 19337 3.150767 CCTCTCTTCCGGTAGGTGATAG 58.849 54.545 8.37 0.00 39.05 2.08
6027 19338 2.158505 CCCTCTCTTCCGGTAGGTGATA 60.159 54.545 8.37 0.00 39.05 2.15
6028 19339 1.411787 CCCTCTCTTCCGGTAGGTGAT 60.412 57.143 8.37 0.00 39.05 3.06
6029 19340 0.033405 CCCTCTCTTCCGGTAGGTGA 60.033 60.000 8.37 6.42 39.05 4.02
6030 19341 1.677637 GCCCTCTCTTCCGGTAGGTG 61.678 65.000 8.37 2.27 39.05 4.00
6031 19342 1.381463 GCCCTCTCTTCCGGTAGGT 60.381 63.158 8.37 0.00 39.05 3.08
6032 19343 2.134933 GGCCCTCTCTTCCGGTAGG 61.135 68.421 8.37 5.55 39.46 3.18
6033 19344 1.075896 AGGCCCTCTCTTCCGGTAG 60.076 63.158 0.00 0.00 0.00 3.18
6034 19345 1.381327 CAGGCCCTCTCTTCCGGTA 60.381 63.158 0.00 0.00 0.00 4.02
6035 19346 2.537714 ATCAGGCCCTCTCTTCCGGT 62.538 60.000 0.00 0.00 0.00 5.28
6036 19347 1.753368 GATCAGGCCCTCTCTTCCGG 61.753 65.000 0.00 0.00 0.00 5.14
6037 19348 1.045350 TGATCAGGCCCTCTCTTCCG 61.045 60.000 0.00 0.00 0.00 4.30
6038 19349 1.140652 CTTGATCAGGCCCTCTCTTCC 59.859 57.143 0.00 0.00 0.00 3.46
6039 19350 2.102925 CTCTTGATCAGGCCCTCTCTTC 59.897 54.545 0.00 0.00 0.00 2.87
6040 19351 2.117865 CTCTTGATCAGGCCCTCTCTT 58.882 52.381 0.00 0.00 0.00 2.85
6041 19352 1.792115 CTCTTGATCAGGCCCTCTCT 58.208 55.000 0.00 0.00 0.00 3.10
6042 19353 0.106521 GCTCTTGATCAGGCCCTCTC 59.893 60.000 0.00 0.00 0.00 3.20
6043 19354 1.684386 CGCTCTTGATCAGGCCCTCT 61.684 60.000 0.00 0.00 0.00 3.69
6044 19355 1.227497 CGCTCTTGATCAGGCCCTC 60.227 63.158 0.00 0.00 0.00 4.30
6045 19356 2.906458 CGCTCTTGATCAGGCCCT 59.094 61.111 0.00 0.00 0.00 5.19
6046 19357 2.899339 GCGCTCTTGATCAGGCCC 60.899 66.667 0.00 0.00 0.00 5.80
6047 19358 1.712977 CTTGCGCTCTTGATCAGGCC 61.713 60.000 9.73 0.00 0.00 5.19
6048 19359 0.742281 TCTTGCGCTCTTGATCAGGC 60.742 55.000 9.73 3.86 0.00 4.85
6049 19360 1.664659 CTTCTTGCGCTCTTGATCAGG 59.335 52.381 9.73 0.00 0.00 3.86
6050 19361 2.344950 ACTTCTTGCGCTCTTGATCAG 58.655 47.619 9.73 0.00 0.00 2.90
6051 19362 2.462456 ACTTCTTGCGCTCTTGATCA 57.538 45.000 9.73 0.00 0.00 2.92
6052 19363 2.738846 TCAACTTCTTGCGCTCTTGATC 59.261 45.455 9.73 0.00 0.00 2.92
6053 19364 2.740981 CTCAACTTCTTGCGCTCTTGAT 59.259 45.455 9.73 0.00 0.00 2.57
6054 19365 2.138320 CTCAACTTCTTGCGCTCTTGA 58.862 47.619 9.73 5.50 0.00 3.02
6055 19366 1.196354 CCTCAACTTCTTGCGCTCTTG 59.804 52.381 9.73 1.12 0.00 3.02
6056 19367 1.070758 TCCTCAACTTCTTGCGCTCTT 59.929 47.619 9.73 0.00 0.00 2.85
6057 19368 0.681733 TCCTCAACTTCTTGCGCTCT 59.318 50.000 9.73 0.00 0.00 4.09
6058 19369 1.074752 CTCCTCAACTTCTTGCGCTC 58.925 55.000 9.73 0.00 0.00 5.03
6059 19370 0.952984 GCTCCTCAACTTCTTGCGCT 60.953 55.000 9.73 0.00 0.00 5.92
6060 19371 1.230635 TGCTCCTCAACTTCTTGCGC 61.231 55.000 0.00 0.00 0.00 6.09
6061 19372 1.229428 TTGCTCCTCAACTTCTTGCG 58.771 50.000 0.00 0.00 0.00 4.85
6062 19373 2.620585 AGTTTGCTCCTCAACTTCTTGC 59.379 45.455 0.00 0.00 33.73 4.01
6063 19374 4.024218 CAGAGTTTGCTCCTCAACTTCTTG 60.024 45.833 0.00 0.00 42.59 3.02
6064 19375 4.133078 CAGAGTTTGCTCCTCAACTTCTT 58.867 43.478 0.00 0.00 42.59 2.52
6065 19376 3.737850 CAGAGTTTGCTCCTCAACTTCT 58.262 45.455 0.00 0.00 42.59 2.85
6078 19389 2.271800 GTCGGGTGATAGCAGAGTTTG 58.728 52.381 0.00 0.00 0.00 2.93
6079 19390 1.207329 GGTCGGGTGATAGCAGAGTTT 59.793 52.381 0.00 0.00 0.00 2.66
6080 19391 0.824759 GGTCGGGTGATAGCAGAGTT 59.175 55.000 0.00 0.00 0.00 3.01
6081 19392 1.043673 GGGTCGGGTGATAGCAGAGT 61.044 60.000 0.00 0.00 0.00 3.24
6082 19393 1.742768 GGGTCGGGTGATAGCAGAG 59.257 63.158 0.00 0.00 0.00 3.35
6083 19394 2.125326 CGGGTCGGGTGATAGCAGA 61.125 63.158 0.00 0.00 0.00 4.26
6084 19395 2.417516 CGGGTCGGGTGATAGCAG 59.582 66.667 0.00 0.00 0.00 4.24
6085 19396 3.151710 CCGGGTCGGGTGATAGCA 61.152 66.667 0.00 0.00 44.15 3.49
6108 19419 3.263503 TTCTCGACCACGGCGACTG 62.264 63.158 16.62 1.15 40.21 3.51
6109 19420 2.981909 TTCTCGACCACGGCGACT 60.982 61.111 16.62 0.00 40.21 4.18
6110 19421 2.804090 GTTCTCGACCACGGCGAC 60.804 66.667 16.62 0.69 40.21 5.19
6111 19422 2.352704 TTTGTTCTCGACCACGGCGA 62.353 55.000 16.62 0.00 40.21 5.54
6112 19423 1.289109 ATTTGTTCTCGACCACGGCG 61.289 55.000 4.80 4.80 40.21 6.46
6113 19424 0.872388 AATTTGTTCTCGACCACGGC 59.128 50.000 0.00 0.00 40.21 5.68
6114 19425 2.157668 CAGAATTTGTTCTCGACCACGG 59.842 50.000 0.00 0.00 40.21 4.94
6115 19426 3.057019 TCAGAATTTGTTCTCGACCACG 58.943 45.455 0.00 0.00 41.26 4.94
6116 19427 5.409826 AGATTCAGAATTTGTTCTCGACCAC 59.590 40.000 0.00 0.00 0.00 4.16
6117 19428 5.551233 AGATTCAGAATTTGTTCTCGACCA 58.449 37.500 0.00 0.00 0.00 4.02
6118 19429 5.872070 AGAGATTCAGAATTTGTTCTCGACC 59.128 40.000 0.00 0.00 39.72 4.79
6119 19430 6.671879 GCAGAGATTCAGAATTTGTTCTCGAC 60.672 42.308 0.00 0.00 39.72 4.20
6120 19431 5.349817 GCAGAGATTCAGAATTTGTTCTCGA 59.650 40.000 0.00 0.00 39.72 4.04
6121 19432 5.350914 AGCAGAGATTCAGAATTTGTTCTCG 59.649 40.000 0.00 0.00 39.72 4.04
6122 19433 6.740411 AGCAGAGATTCAGAATTTGTTCTC 57.260 37.500 0.00 0.00 37.39 2.87
6123 19434 6.569994 GCAAGCAGAGATTCAGAATTTGTTCT 60.570 38.462 0.00 0.00 0.00 3.01
6124 19435 5.572126 GCAAGCAGAGATTCAGAATTTGTTC 59.428 40.000 0.00 0.00 0.00 3.18
6125 19436 5.010314 TGCAAGCAGAGATTCAGAATTTGTT 59.990 36.000 0.00 0.00 0.00 2.83
6126 19437 4.521639 TGCAAGCAGAGATTCAGAATTTGT 59.478 37.500 0.00 0.00 0.00 2.83
6127 19438 4.857588 GTGCAAGCAGAGATTCAGAATTTG 59.142 41.667 0.00 0.00 0.00 2.32
6128 19439 4.521639 TGTGCAAGCAGAGATTCAGAATTT 59.478 37.500 0.00 0.00 0.00 1.82
6129 19440 4.077108 TGTGCAAGCAGAGATTCAGAATT 58.923 39.130 0.00 0.00 0.00 2.17
6130 19441 3.682696 TGTGCAAGCAGAGATTCAGAAT 58.317 40.909 0.00 0.00 0.00 2.40
6131 19442 3.072211 CTGTGCAAGCAGAGATTCAGAA 58.928 45.455 13.35 0.00 39.36 3.02
6132 19443 2.614734 CCTGTGCAAGCAGAGATTCAGA 60.615 50.000 19.38 0.00 39.36 3.27
6133 19444 1.738350 CCTGTGCAAGCAGAGATTCAG 59.262 52.381 19.38 10.27 39.36 3.02
6134 19445 1.817357 CCTGTGCAAGCAGAGATTCA 58.183 50.000 19.38 1.06 39.36 2.57
6135 19446 0.450983 GCCTGTGCAAGCAGAGATTC 59.549 55.000 19.38 5.74 39.36 2.52
6136 19447 0.251033 TGCCTGTGCAAGCAGAGATT 60.251 50.000 19.38 0.00 46.66 2.40
6137 19448 1.377612 TGCCTGTGCAAGCAGAGAT 59.622 52.632 19.38 0.00 46.66 2.75
6138 19449 2.831043 TGCCTGTGCAAGCAGAGA 59.169 55.556 19.38 0.00 46.66 3.10
6153 19464 2.658268 GTTGCTTGTGGCCGTTGC 60.658 61.111 0.00 0.00 40.92 4.17
6154 19465 2.353376 CGTTGCTTGTGGCCGTTG 60.353 61.111 0.00 0.00 40.92 4.10
6155 19466 3.591835 CCGTTGCTTGTGGCCGTT 61.592 61.111 0.00 0.00 40.92 4.44
6160 19471 2.682256 CTTGTGGCCGTTGCTTGTGG 62.682 60.000 0.00 0.00 37.74 4.17
6161 19472 1.299316 CTTGTGGCCGTTGCTTGTG 60.299 57.895 0.00 0.00 37.74 3.33
6162 19473 3.119193 CTTGTGGCCGTTGCTTGT 58.881 55.556 0.00 0.00 37.74 3.16
6163 19474 2.355009 GCTTGTGGCCGTTGCTTG 60.355 61.111 0.00 0.00 37.74 4.01
6164 19475 2.832661 TGCTTGTGGCCGTTGCTT 60.833 55.556 0.00 0.00 40.92 3.91
6165 19476 3.289834 CTGCTTGTGGCCGTTGCT 61.290 61.111 0.00 0.00 40.92 3.91
6166 19477 3.595758 ACTGCTTGTGGCCGTTGC 61.596 61.111 0.00 0.00 40.92 4.17
6167 19478 2.332514 CACTGCTTGTGGCCGTTG 59.667 61.111 0.00 0.00 42.68 4.10
6175 19486 0.471617 AAGAGCTCCACACTGCTTGT 59.528 50.000 10.93 0.00 39.91 3.16
6176 19487 1.155042 GAAGAGCTCCACACTGCTTG 58.845 55.000 10.93 0.00 39.91 4.01
6177 19488 0.761187 TGAAGAGCTCCACACTGCTT 59.239 50.000 10.93 0.00 39.91 3.91
6178 19489 0.034616 GTGAAGAGCTCCACACTGCT 59.965 55.000 24.31 0.00 42.82 4.24
6179 19490 0.250038 TGTGAAGAGCTCCACACTGC 60.250 55.000 28.41 12.99 38.26 4.40
6180 19491 1.607509 CCTGTGAAGAGCTCCACACTG 60.608 57.143 28.41 27.06 38.26 3.66
6181 19492 0.683973 CCTGTGAAGAGCTCCACACT 59.316 55.000 28.41 4.78 38.26 3.55
6182 19493 0.952984 GCCTGTGAAGAGCTCCACAC 60.953 60.000 24.63 24.63 38.26 3.82
6183 19494 1.372683 GCCTGTGAAGAGCTCCACA 59.627 57.895 20.31 20.31 40.56 4.17
6184 19495 0.250467 TTGCCTGTGAAGAGCTCCAC 60.250 55.000 10.93 12.93 0.00 4.02
6185 19496 0.250467 GTTGCCTGTGAAGAGCTCCA 60.250 55.000 10.93 0.00 0.00 3.86
6186 19497 1.294659 CGTTGCCTGTGAAGAGCTCC 61.295 60.000 10.93 0.00 0.00 4.70
6187 19498 1.294659 CCGTTGCCTGTGAAGAGCTC 61.295 60.000 5.27 5.27 0.00 4.09
6188 19499 1.302033 CCGTTGCCTGTGAAGAGCT 60.302 57.895 0.00 0.00 0.00 4.09
6189 19500 2.970974 GCCGTTGCCTGTGAAGAGC 61.971 63.158 0.00 0.00 0.00 4.09
6190 19501 3.257933 GCCGTTGCCTGTGAAGAG 58.742 61.111 0.00 0.00 0.00 2.85
6206 19517 1.007387 CCGTGAAAAGGCTTGTGGC 60.007 57.895 0.00 0.00 40.90 5.01
6207 19518 0.593128 CTCCGTGAAAAGGCTTGTGG 59.407 55.000 0.00 0.00 34.48 4.17
6208 19519 0.593128 CCTCCGTGAAAAGGCTTGTG 59.407 55.000 0.00 0.00 34.48 3.33
6209 19520 0.182775 ACCTCCGTGAAAAGGCTTGT 59.817 50.000 0.00 0.00 34.48 3.16
6210 19521 2.076863 CTACCTCCGTGAAAAGGCTTG 58.923 52.381 0.00 0.00 34.48 4.01
6211 19522 1.975680 TCTACCTCCGTGAAAAGGCTT 59.024 47.619 0.00 0.00 34.48 4.35
6212 19523 1.550976 CTCTACCTCCGTGAAAAGGCT 59.449 52.381 0.00 0.00 34.48 4.58
6213 19524 1.549170 TCTCTACCTCCGTGAAAAGGC 59.451 52.381 0.00 0.00 34.48 4.35
6214 19525 3.195825 ACATCTCTACCTCCGTGAAAAGG 59.804 47.826 0.00 0.00 38.70 3.11
6215 19526 4.425520 GACATCTCTACCTCCGTGAAAAG 58.574 47.826 0.00 0.00 0.00 2.27
6216 19527 3.119602 CGACATCTCTACCTCCGTGAAAA 60.120 47.826 0.00 0.00 0.00 2.29
6217 19528 2.422479 CGACATCTCTACCTCCGTGAAA 59.578 50.000 0.00 0.00 0.00 2.69
6218 19529 2.014857 CGACATCTCTACCTCCGTGAA 58.985 52.381 0.00 0.00 0.00 3.18
6219 19530 1.664873 CGACATCTCTACCTCCGTGA 58.335 55.000 0.00 0.00 0.00 4.35
6220 19531 0.029567 GCGACATCTCTACCTCCGTG 59.970 60.000 0.00 0.00 0.00 4.94
6221 19532 0.393944 TGCGACATCTCTACCTCCGT 60.394 55.000 0.00 0.00 0.00 4.69
6222 19533 0.309302 CTGCGACATCTCTACCTCCG 59.691 60.000 0.00 0.00 0.00 4.63
6223 19534 0.031449 GCTGCGACATCTCTACCTCC 59.969 60.000 0.00 0.00 0.00 4.30
6224 19535 1.001815 GAGCTGCGACATCTCTACCTC 60.002 57.143 0.00 0.00 0.00 3.85
6225 19536 1.028905 GAGCTGCGACATCTCTACCT 58.971 55.000 0.00 0.00 0.00 3.08
6226 19537 1.001815 GAGAGCTGCGACATCTCTACC 60.002 57.143 11.42 0.73 37.13 3.18
6227 19538 1.946768 AGAGAGCTGCGACATCTCTAC 59.053 52.381 15.12 7.25 46.11 2.59
6228 19539 2.340210 AGAGAGCTGCGACATCTCTA 57.660 50.000 15.12 0.00 46.11 2.43
6229 19540 3.189568 AGAGAGCTGCGACATCTCT 57.810 52.632 11.95 11.95 43.84 3.10
6230 19541 2.217750 TCTAGAGAGCTGCGACATCTC 58.782 52.381 8.18 8.18 39.83 2.75
6231 19542 2.221169 CTCTAGAGAGCTGCGACATCT 58.779 52.381 15.05 0.00 35.13 2.90
6232 19543 1.266718 CCTCTAGAGAGCTGCGACATC 59.733 57.143 21.76 0.00 40.75 3.06
6233 19544 1.317613 CCTCTAGAGAGCTGCGACAT 58.682 55.000 21.76 0.00 40.75 3.06
6234 19545 1.380403 GCCTCTAGAGAGCTGCGACA 61.380 60.000 21.76 0.00 40.75 4.35
6235 19546 1.358759 GCCTCTAGAGAGCTGCGAC 59.641 63.158 21.76 0.00 40.75 5.19
6236 19547 1.826054 GGCCTCTAGAGAGCTGCGA 60.826 63.158 21.76 0.00 40.75 5.10
6237 19548 2.727544 GGCCTCTAGAGAGCTGCG 59.272 66.667 21.76 4.22 40.75 5.18
6238 19549 2.506957 GGGGCCTCTAGAGAGCTGC 61.507 68.421 21.76 14.92 40.75 5.25
6239 19550 0.827507 GAGGGGCCTCTAGAGAGCTG 60.828 65.000 21.76 5.36 40.75 4.24
6240 19551 1.541672 GAGGGGCCTCTAGAGAGCT 59.458 63.158 21.76 7.16 40.75 4.09
6241 19552 4.191243 GAGGGGCCTCTAGAGAGC 57.809 66.667 21.76 20.32 40.75 4.09
6249 19560 4.168291 CGGCTTGAGAGGGGCCTC 62.168 72.222 0.84 0.00 43.29 4.70
6250 19561 4.722535 TCGGCTTGAGAGGGGCCT 62.723 66.667 0.84 0.00 43.29 5.19
6259 19570 2.357637 CCTTGAAACAAACTCGGCTTGA 59.642 45.455 0.07 0.00 0.00 3.02
6260 19571 2.357637 TCCTTGAAACAAACTCGGCTTG 59.642 45.455 0.00 0.00 0.00 4.01
6272 19583 3.441500 ACATTCCCCTCTCCTTGAAAC 57.558 47.619 0.00 0.00 0.00 2.78
6322 19636 3.117171 CGTGCAGAGCCAGAGTGC 61.117 66.667 0.00 0.00 37.73 4.40
6337 19651 1.555075 ACAAGGTGGATGTATGAGCGT 59.445 47.619 0.00 0.00 0.00 5.07
6340 19654 5.765182 GGGAATTACAAGGTGGATGTATGAG 59.235 44.000 0.00 0.00 33.55 2.90
6350 19675 1.468520 CACGCAGGGAATTACAAGGTG 59.531 52.381 0.00 0.00 0.00 4.00
6361 19686 2.099652 CTCACTCAACCACGCAGGGA 62.100 60.000 0.00 0.00 43.89 4.20
6364 19689 0.583438 CAACTCACTCAACCACGCAG 59.417 55.000 0.00 0.00 0.00 5.18
6381 19706 3.199946 CCTGTTAGCAATCCTCTACCCAA 59.800 47.826 0.00 0.00 0.00 4.12
6384 19709 4.965200 ATCCTGTTAGCAATCCTCTACC 57.035 45.455 0.00 0.00 0.00 3.18
6456 19784 5.471797 TCGAGGCAATCATCTTGTAACAAAA 59.528 36.000 0.00 0.00 0.00 2.44
6457 19785 5.000591 TCGAGGCAATCATCTTGTAACAAA 58.999 37.500 0.00 0.00 0.00 2.83
6458 19786 4.391830 GTCGAGGCAATCATCTTGTAACAA 59.608 41.667 0.00 0.00 0.00 2.83
6480 19856 0.238289 CGCATTTGCTTCCGTTCTGT 59.762 50.000 0.51 0.00 39.32 3.41
6482 19858 1.453155 ATCGCATTTGCTTCCGTTCT 58.547 45.000 0.51 0.00 39.32 3.01
6483 19859 2.262572 AATCGCATTTGCTTCCGTTC 57.737 45.000 0.51 0.00 39.32 3.95
6484 19860 2.097466 CCTAATCGCATTTGCTTCCGTT 59.903 45.455 0.51 0.00 39.32 4.44
6485 19861 1.670811 CCTAATCGCATTTGCTTCCGT 59.329 47.619 0.51 0.00 39.32 4.69
6529 19905 7.228108 ACAATATTGCATGAAGATCAGTAGTGG 59.772 37.037 15.48 0.00 0.00 4.00
6541 19917 5.357878 GGACCTCTCAACAATATTGCATGAA 59.642 40.000 15.48 9.71 30.26 2.57
6542 19918 4.883585 GGACCTCTCAACAATATTGCATGA 59.116 41.667 15.48 17.22 0.00 3.07
6546 19922 3.065925 GCAGGACCTCTCAACAATATTGC 59.934 47.826 15.48 0.00 0.00 3.56
6562 19959 5.569413 CGGTACATTTATTTTCAGCAGGAC 58.431 41.667 0.00 0.00 0.00 3.85
6564 19961 4.351192 GCGGTACATTTATTTTCAGCAGG 58.649 43.478 0.00 0.00 0.00 4.85
6571 19968 3.833545 TGTGCGCGGTACATTTATTTT 57.166 38.095 8.83 0.00 0.00 1.82
6578 19975 1.497991 GTCATATGTGCGCGGTACAT 58.502 50.000 15.17 15.17 41.37 2.29
6581 19978 0.031585 GAGGTCATATGTGCGCGGTA 59.968 55.000 8.83 0.00 0.00 4.02
6582 19979 1.227263 GAGGTCATATGTGCGCGGT 60.227 57.895 8.83 0.00 0.00 5.68
6583 19980 0.809636 TTGAGGTCATATGTGCGCGG 60.810 55.000 8.83 0.00 0.00 6.46
6584 19981 1.004610 CTTTGAGGTCATATGTGCGCG 60.005 52.381 0.00 0.00 0.00 6.86
6585 19982 1.331756 CCTTTGAGGTCATATGTGCGC 59.668 52.381 0.00 0.00 0.00 6.09
6597 19994 2.095059 GCTGCACATGTAACCTTTGAGG 60.095 50.000 0.00 0.00 42.49 3.86
6598 19995 2.095059 GGCTGCACATGTAACCTTTGAG 60.095 50.000 0.00 0.00 0.00 3.02
6599 19996 1.885887 GGCTGCACATGTAACCTTTGA 59.114 47.619 0.00 0.00 0.00 2.69
6600 19997 1.612950 TGGCTGCACATGTAACCTTTG 59.387 47.619 0.00 0.00 0.00 2.77
6601 19998 1.993956 TGGCTGCACATGTAACCTTT 58.006 45.000 0.00 0.00 0.00 3.11
6602 19999 1.888512 CTTGGCTGCACATGTAACCTT 59.111 47.619 0.00 0.00 0.00 3.50
6603 20000 1.202927 ACTTGGCTGCACATGTAACCT 60.203 47.619 0.00 0.00 0.00 3.50
6604 20001 1.068333 CACTTGGCTGCACATGTAACC 60.068 52.381 0.00 0.00 0.00 2.85
6605 20002 1.666888 GCACTTGGCTGCACATGTAAC 60.667 52.381 0.00 0.00 40.25 2.50
6606 20003 0.597568 GCACTTGGCTGCACATGTAA 59.402 50.000 0.00 0.00 40.25 2.41
6607 20004 0.536915 TGCACTTGGCTGCACATGTA 60.537 50.000 0.00 0.00 42.36 2.29
6608 20005 1.829096 TGCACTTGGCTGCACATGT 60.829 52.632 0.50 0.00 42.36 3.21
6609 20006 3.044280 TGCACTTGGCTGCACATG 58.956 55.556 0.50 0.00 42.36 3.21
6614 20011 1.137404 CCGTTATGCACTTGGCTGC 59.863 57.895 0.00 0.00 45.15 5.25
6615 20012 0.960364 ACCCGTTATGCACTTGGCTG 60.960 55.000 0.00 0.00 45.15 4.85
6616 20013 0.960364 CACCCGTTATGCACTTGGCT 60.960 55.000 0.00 0.00 45.15 4.75
6617 20014 0.958382 TCACCCGTTATGCACTTGGC 60.958 55.000 0.00 0.00 45.13 4.52
6618 20015 0.802494 GTCACCCGTTATGCACTTGG 59.198 55.000 0.00 0.00 0.00 3.61
6619 20016 1.808411 AGTCACCCGTTATGCACTTG 58.192 50.000 0.00 0.00 0.00 3.16
6620 20017 3.688694 TTAGTCACCCGTTATGCACTT 57.311 42.857 0.00 0.00 0.00 3.16
6621 20018 3.688694 TTTAGTCACCCGTTATGCACT 57.311 42.857 0.00 0.00 0.00 4.40
6622 20019 3.499157 TGTTTTAGTCACCCGTTATGCAC 59.501 43.478 0.00 0.00 0.00 4.57
6662 20059 4.044426 GCTAAGGTTTTTGCAACACAGAG 58.956 43.478 0.00 0.00 35.51 3.35
6668 20065 1.136690 GCCGCTAAGGTTTTTGCAAC 58.863 50.000 0.00 0.00 43.70 4.17
6686 21430 0.319813 GATGGTTTGGCTGTTGTGGC 60.320 55.000 0.00 0.00 0.00 5.01
6700 21444 1.174783 AAGTACGTGCGAGAGATGGT 58.825 50.000 0.00 0.00 0.00 3.55
6702 21446 3.138205 AGAAAGTACGTGCGAGAGATG 57.862 47.619 0.00 0.00 0.00 2.90
6703 21447 4.190001 TCTAGAAAGTACGTGCGAGAGAT 58.810 43.478 0.00 0.00 0.00 2.75
6704 21448 3.593096 TCTAGAAAGTACGTGCGAGAGA 58.407 45.455 0.00 0.00 0.00 3.10
6707 21451 4.274421 TGATCTAGAAAGTACGTGCGAG 57.726 45.455 0.00 0.00 0.00 5.03
6709 21453 4.598062 TGATGATCTAGAAAGTACGTGCG 58.402 43.478 0.00 0.00 0.00 5.34
6714 21488 9.606631 AGTCCAATTTGATGATCTAGAAAGTAC 57.393 33.333 0.00 0.00 0.00 2.73
6727 21501 9.726232 CTCACATTACATTAGTCCAATTTGATG 57.274 33.333 0.00 0.00 30.50 3.07
6750 21524 8.985315 AATCCATTTTGAAGATATGTAGCTCA 57.015 30.769 0.00 0.00 0.00 4.26
6761 21535 9.117183 CAGTGATGATCTAATCCATTTTGAAGA 57.883 33.333 0.00 0.00 0.00 2.87
6762 21536 9.117183 TCAGTGATGATCTAATCCATTTTGAAG 57.883 33.333 0.00 0.00 0.00 3.02
6763 21537 9.465199 TTCAGTGATGATCTAATCCATTTTGAA 57.535 29.630 0.00 0.00 0.00 2.69
6764 21538 9.465199 TTTCAGTGATGATCTAATCCATTTTGA 57.535 29.630 0.00 0.00 0.00 2.69
6768 21542 9.118300 GAGTTTTCAGTGATGATCTAATCCATT 57.882 33.333 0.00 0.00 0.00 3.16
6771 21545 7.278875 AGGAGTTTTCAGTGATGATCTAATCC 58.721 38.462 0.00 0.00 0.00 3.01
6772 21546 8.729805 AAGGAGTTTTCAGTGATGATCTAATC 57.270 34.615 0.00 0.00 0.00 1.75
6773 21547 9.171877 GAAAGGAGTTTTCAGTGATGATCTAAT 57.828 33.333 0.00 0.00 43.79 1.73
6775 21549 6.813649 CGAAAGGAGTTTTCAGTGATGATCTA 59.186 38.462 0.00 0.00 44.42 1.98
6776 21550 5.641209 CGAAAGGAGTTTTCAGTGATGATCT 59.359 40.000 0.00 0.00 44.42 2.75
6777 21551 5.639506 TCGAAAGGAGTTTTCAGTGATGATC 59.360 40.000 0.00 0.00 44.42 2.92
6779 21553 4.956085 TCGAAAGGAGTTTTCAGTGATGA 58.044 39.130 0.00 0.00 44.42 2.92
6781 21555 7.824289 TCATATTCGAAAGGAGTTTTCAGTGAT 59.176 33.333 0.00 0.00 44.42 3.06
6784 21558 7.979444 TTCATATTCGAAAGGAGTTTTCAGT 57.021 32.000 0.00 0.00 44.42 3.41
6785 21559 9.495754 GAATTCATATTCGAAAGGAGTTTTCAG 57.504 33.333 0.00 0.00 44.42 3.02
6804 21578 9.950680 GTCACAAAAATATACCATCGAATTCAT 57.049 29.630 6.22 0.00 0.00 2.57
6805 21579 8.951243 TGTCACAAAAATATACCATCGAATTCA 58.049 29.630 6.22 0.00 0.00 2.57
6806 21580 9.950680 ATGTCACAAAAATATACCATCGAATTC 57.049 29.630 0.00 0.00 0.00 2.17
6833 21607 9.859427 CACCAGTTTGATTGAAATGTGTATTAT 57.141 29.630 0.00 0.00 0.00 1.28
6835 21609 7.950512 TCACCAGTTTGATTGAAATGTGTATT 58.049 30.769 0.00 0.00 0.00 1.89
6837 21611 6.951062 TCACCAGTTTGATTGAAATGTGTA 57.049 33.333 0.00 0.00 0.00 2.90
6839 21613 5.865552 GGATCACCAGTTTGATTGAAATGTG 59.134 40.000 0.00 0.00 36.30 3.21
6840 21614 5.776716 AGGATCACCAGTTTGATTGAAATGT 59.223 36.000 0.00 0.00 36.30 2.71
6841 21615 6.276832 AGGATCACCAGTTTGATTGAAATG 57.723 37.500 0.00 0.00 36.30 2.32
6842 21616 7.405292 TCTAGGATCACCAGTTTGATTGAAAT 58.595 34.615 0.00 0.00 36.30 2.17
6844 21618 6.373005 TCTAGGATCACCAGTTTGATTGAA 57.627 37.500 0.00 0.00 36.30 2.69
6845 21619 6.373005 TTCTAGGATCACCAGTTTGATTGA 57.627 37.500 0.00 0.00 36.30 2.57
6846 21620 6.094603 CCTTTCTAGGATCACCAGTTTGATTG 59.905 42.308 0.00 0.00 45.05 2.67
6849 21623 4.565652 GCCTTTCTAGGATCACCAGTTTGA 60.566 45.833 0.00 0.00 45.05 2.69
6850 21624 3.691609 GCCTTTCTAGGATCACCAGTTTG 59.308 47.826 0.00 0.00 45.05 2.93
6851 21625 3.619979 CGCCTTTCTAGGATCACCAGTTT 60.620 47.826 0.00 0.00 45.05 2.66
6852 21626 2.093447 CGCCTTTCTAGGATCACCAGTT 60.093 50.000 0.00 0.00 45.05 3.16
6853 21627 1.482593 CGCCTTTCTAGGATCACCAGT 59.517 52.381 0.00 0.00 45.05 4.00
6854 21628 1.808133 GCGCCTTTCTAGGATCACCAG 60.808 57.143 0.00 0.00 45.05 4.00
6856 21630 0.178068 TGCGCCTTTCTAGGATCACC 59.822 55.000 4.18 0.00 45.05 4.02
6857 21631 1.936547 CTTGCGCCTTTCTAGGATCAC 59.063 52.381 4.18 0.00 45.05 3.06
6859 21633 2.159028 ACTCTTGCGCCTTTCTAGGATC 60.159 50.000 4.18 0.00 45.05 3.36
6861 21635 1.204941 GACTCTTGCGCCTTTCTAGGA 59.795 52.381 4.18 0.00 45.05 2.94
6862 21636 1.205893 AGACTCTTGCGCCTTTCTAGG 59.794 52.381 4.18 0.00 45.02 3.02
6870 21676 1.197036 GGTTTACAAGACTCTTGCGCC 59.803 52.381 17.29 10.88 0.00 6.53
6884 21690 5.642491 GTGTGACCCTATTCTCTTGGTTTAC 59.358 44.000 0.00 0.00 0.00 2.01
6891 21697 3.870633 GTCGTGTGACCCTATTCTCTT 57.129 47.619 0.00 0.00 39.30 2.85
6903 21709 2.690786 CCCTATTTTTCGGTCGTGTGA 58.309 47.619 0.00 0.00 0.00 3.58
6904 21710 1.129811 GCCCTATTTTTCGGTCGTGTG 59.870 52.381 0.00 0.00 0.00 3.82
6905 21711 1.445871 GCCCTATTTTTCGGTCGTGT 58.554 50.000 0.00 0.00 0.00 4.49
6906 21712 0.730840 GGCCCTATTTTTCGGTCGTG 59.269 55.000 0.00 0.00 0.00 4.35
6907 21713 0.325602 TGGCCCTATTTTTCGGTCGT 59.674 50.000 0.00 0.00 0.00 4.34
6908 21714 0.730840 GTGGCCCTATTTTTCGGTCG 59.269 55.000 0.00 0.00 0.00 4.79
6909 21715 1.471287 GTGTGGCCCTATTTTTCGGTC 59.529 52.381 0.00 0.00 0.00 4.79
6910 21716 1.202952 TGTGTGGCCCTATTTTTCGGT 60.203 47.619 0.00 0.00 0.00 4.69
6911 21717 1.540267 TGTGTGGCCCTATTTTTCGG 58.460 50.000 0.00 0.00 0.00 4.30
6912 21718 2.556622 AGTTGTGTGGCCCTATTTTTCG 59.443 45.455 0.00 0.00 0.00 3.46
6913 21719 4.521256 TGTAGTTGTGTGGCCCTATTTTTC 59.479 41.667 0.00 0.00 0.00 2.29
6914 21720 4.475345 TGTAGTTGTGTGGCCCTATTTTT 58.525 39.130 0.00 0.00 0.00 1.94
6915 21721 4.107127 TGTAGTTGTGTGGCCCTATTTT 57.893 40.909 0.00 0.00 0.00 1.82
6916 21722 3.799432 TGTAGTTGTGTGGCCCTATTT 57.201 42.857 0.00 0.00 0.00 1.40
6917 21723 3.799432 TTGTAGTTGTGTGGCCCTATT 57.201 42.857 0.00 0.00 0.00 1.73
6918 21724 3.181438 TGTTTGTAGTTGTGTGGCCCTAT 60.181 43.478 0.00 0.00 0.00 2.57
6919 21725 2.172930 TGTTTGTAGTTGTGTGGCCCTA 59.827 45.455 0.00 0.00 0.00 3.53
6920 21726 1.064314 TGTTTGTAGTTGTGTGGCCCT 60.064 47.619 0.00 0.00 0.00 5.19
6921 21727 1.336755 CTGTTTGTAGTTGTGTGGCCC 59.663 52.381 0.00 0.00 0.00 5.80
6922 21728 1.269051 GCTGTTTGTAGTTGTGTGGCC 60.269 52.381 0.00 0.00 0.00 5.36
6923 21729 1.403679 TGCTGTTTGTAGTTGTGTGGC 59.596 47.619 0.00 0.00 0.00 5.01
6924 21730 3.434637 GTTGCTGTTTGTAGTTGTGTGG 58.565 45.455 0.00 0.00 0.00 4.17
6925 21731 3.119673 TGGTTGCTGTTTGTAGTTGTGTG 60.120 43.478 0.00 0.00 0.00 3.82
6926 21732 3.085533 TGGTTGCTGTTTGTAGTTGTGT 58.914 40.909 0.00 0.00 0.00 3.72
6931 21737 5.825679 TGATTTAGTGGTTGCTGTTTGTAGT 59.174 36.000 0.00 0.00 0.00 2.73
6934 21740 5.509501 CCATGATTTAGTGGTTGCTGTTTGT 60.510 40.000 0.00 0.00 0.00 2.83
6941 21747 1.824230 TGGCCATGATTTAGTGGTTGC 59.176 47.619 0.00 0.00 37.81 4.17
6942 21748 3.091545 ACTGGCCATGATTTAGTGGTTG 58.908 45.455 5.51 0.00 37.81 3.77
6973 21779 1.813786 GCGTAATGTTGCCCTGGTTAA 59.186 47.619 0.00 0.00 0.00 2.01
6974 21780 1.455248 GCGTAATGTTGCCCTGGTTA 58.545 50.000 0.00 0.00 0.00 2.85
6975 21781 1.582610 CGCGTAATGTTGCCCTGGTT 61.583 55.000 0.00 0.00 0.00 3.67
6980 21786 0.453782 GTGTTCGCGTAATGTTGCCC 60.454 55.000 5.77 0.00 0.00 5.36
6984 21790 6.709145 TTATAACTGTGTTCGCGTAATGTT 57.291 33.333 5.77 7.95 0.00 2.71
6985 21791 6.019318 GGATTATAACTGTGTTCGCGTAATGT 60.019 38.462 5.77 0.00 0.00 2.71
6986 21792 6.019398 TGGATTATAACTGTGTTCGCGTAATG 60.019 38.462 5.77 0.00 0.00 1.90
6989 21795 4.996344 TGGATTATAACTGTGTTCGCGTA 58.004 39.130 5.77 0.00 0.00 4.42
6992 21798 4.868171 TGACTGGATTATAACTGTGTTCGC 59.132 41.667 0.00 0.00 0.00 4.70
6994 21800 5.291128 CGGTGACTGGATTATAACTGTGTTC 59.709 44.000 0.00 0.00 0.00 3.18
6995 21801 5.175859 CGGTGACTGGATTATAACTGTGTT 58.824 41.667 0.00 0.00 0.00 3.32
6996 21802 4.222145 ACGGTGACTGGATTATAACTGTGT 59.778 41.667 0.00 0.00 0.00 3.72
6997 21803 4.755411 ACGGTGACTGGATTATAACTGTG 58.245 43.478 0.00 0.00 0.00 3.66
6998 21804 4.464951 TGACGGTGACTGGATTATAACTGT 59.535 41.667 0.00 0.00 0.00 3.55
6999 21805 5.006153 TGACGGTGACTGGATTATAACTG 57.994 43.478 0.00 0.00 0.00 3.16
7000 21806 4.710375 ACTGACGGTGACTGGATTATAACT 59.290 41.667 0.00 0.00 0.00 2.24
7001 21807 5.007385 ACTGACGGTGACTGGATTATAAC 57.993 43.478 0.00 0.00 0.00 1.89
7002 21808 4.707934 TGACTGACGGTGACTGGATTATAA 59.292 41.667 0.00 0.00 0.00 0.98
7003 21809 4.274978 TGACTGACGGTGACTGGATTATA 58.725 43.478 0.00 0.00 0.00 0.98
7004 21810 3.096852 TGACTGACGGTGACTGGATTAT 58.903 45.455 0.00 0.00 0.00 1.28
7005 21811 2.492088 CTGACTGACGGTGACTGGATTA 59.508 50.000 0.00 0.00 0.00 1.75
7006 21812 1.273606 CTGACTGACGGTGACTGGATT 59.726 52.381 0.00 0.00 0.00 3.01
7008 21814 0.179001 TCTGACTGACGGTGACTGGA 60.179 55.000 0.00 0.00 0.00 3.86
7009 21815 0.242286 CTCTGACTGACGGTGACTGG 59.758 60.000 0.00 0.00 0.00 4.00
7010 21816 0.955178 ACTCTGACTGACGGTGACTG 59.045 55.000 0.00 0.00 0.00 3.51
7011 21817 1.609555 GAACTCTGACTGACGGTGACT 59.390 52.381 0.00 0.00 0.00 3.41
7013 21819 1.337071 GTGAACTCTGACTGACGGTGA 59.663 52.381 0.00 0.00 0.00 4.02
7014 21820 1.338337 AGTGAACTCTGACTGACGGTG 59.662 52.381 0.00 0.00 0.00 4.94
7075 21881 7.066525 TGTGACCGTCTTCAGATTTTTACTTTT 59.933 33.333 0.00 0.00 0.00 2.27
7089 21895 3.371285 GCCTATTTTCTGTGACCGTCTTC 59.629 47.826 0.00 0.00 0.00 2.87
7091 21897 2.301870 TGCCTATTTTCTGTGACCGTCT 59.698 45.455 0.00 0.00 0.00 4.18
7097 21903 1.003118 ACGGCTGCCTATTTTCTGTGA 59.997 47.619 17.92 0.00 0.00 3.58
7116 21922 3.065095 AGAAGCGATAGTCCGTGAACTAC 59.935 47.826 0.00 0.00 34.68 2.73
7118 21924 2.093106 AGAAGCGATAGTCCGTGAACT 58.907 47.619 0.00 0.00 39.35 3.01
7135 21941 4.130857 TGTTTCAGCATGTTCCGTAAGAA 58.869 39.130 0.00 0.00 36.97 2.52
7146 21952 5.946298 TCTGCTTAAAGATGTTTCAGCATG 58.054 37.500 20.58 15.37 46.70 4.06
7198 22004 0.593128 ACGGATTCTTGTGCTTGTGC 59.407 50.000 0.00 0.00 40.20 4.57
7216 22022 6.585322 GTCACATTTCCGTGTATATAGCCTAC 59.415 42.308 0.00 0.00 38.12 3.18
7224 22242 3.261137 TGGTGGTCACATTTCCGTGTATA 59.739 43.478 3.40 0.00 38.12 1.47
7225 22243 2.039216 TGGTGGTCACATTTCCGTGTAT 59.961 45.455 3.40 0.00 38.12 2.29
7226 22244 1.416772 TGGTGGTCACATTTCCGTGTA 59.583 47.619 3.40 0.00 38.12 2.90
7227 22245 0.181587 TGGTGGTCACATTTCCGTGT 59.818 50.000 3.40 0.00 38.12 4.49
7228 22246 0.591170 GTGGTGGTCACATTTCCGTG 59.409 55.000 3.40 0.00 45.39 4.94
7229 22247 3.015516 GTGGTGGTCACATTTCCGT 57.984 52.632 3.40 0.00 45.39 4.69
7237 22255 0.179045 ACAAGAGCTGTGGTGGTCAC 60.179 55.000 0.00 0.00 46.23 3.67
7307 22948 9.503427 CTACCAAAAATATTGCTAGCTGTAAAC 57.497 33.333 17.23 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.