Multiple sequence alignment - TraesCS7A01G108900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G108900 chr7A 100.000 3047 0 0 1 3047 66230066 66227020 0.000000e+00 5627.0
1 TraesCS7A01G108900 chr7A 91.489 94 8 0 782 875 66229192 66229285 2.470000e-26 130.0
2 TraesCS7A01G108900 chr7D 88.142 1636 118 38 883 2477 63437232 63435632 0.000000e+00 1877.0
3 TraesCS7A01G108900 chr7D 86.107 655 35 27 82 711 63437934 63437311 0.000000e+00 654.0
4 TraesCS7A01G108900 chr7D 87.805 123 8 3 2467 2583 511994321 511994442 1.470000e-28 137.0
5 TraesCS7A01G108900 chr7D 88.034 117 8 4 2475 2586 58993742 58993627 1.910000e-27 134.0
6 TraesCS7A01G108900 chr7D 90.789 76 3 4 2974 3047 63435443 63435370 6.950000e-17 99.0
7 TraesCS7A01G108900 chr7D 100.000 53 0 0 3 55 63440118 63440066 6.950000e-17 99.0
8 TraesCS7A01G108900 chr7B 87.849 1613 128 43 874 2443 3796660 3795073 0.000000e+00 1831.0
9 TraesCS7A01G108900 chr7B 88.072 721 44 19 40 754 3797670 3796986 0.000000e+00 817.0
10 TraesCS7A01G108900 chr7B 90.798 163 13 2 2672 2834 720936450 720936290 1.840000e-52 217.0
11 TraesCS7A01G108900 chr7B 92.708 96 7 0 2491 2586 332644161 332644066 4.100000e-29 139.0
12 TraesCS7A01G108900 chr7B 84.507 71 4 4 2984 3047 3794810 3794740 2.540000e-06 63.9
13 TraesCS7A01G108900 chr7B 100.000 28 0 0 848 875 99099907 99099934 5.000000e-03 52.8
14 TraesCS7A01G108900 chr6B 81.880 883 105 30 1278 2125 148827696 148828558 0.000000e+00 693.0
15 TraesCS7A01G108900 chr6B 91.875 160 12 1 2672 2831 309685829 309685671 3.950000e-54 222.0
16 TraesCS7A01G108900 chr6B 90.854 164 13 2 2672 2834 688594742 688594580 5.110000e-53 219.0
17 TraesCS7A01G108900 chr6B 91.250 160 13 1 2672 2831 152385924 152386082 1.840000e-52 217.0
18 TraesCS7A01G108900 chr6B 100.000 28 0 0 850 877 654646265 654646292 5.000000e-03 52.8
19 TraesCS7A01G108900 chr3D 80.660 848 101 35 1282 2125 575923598 575922810 1.560000e-167 599.0
20 TraesCS7A01G108900 chr3D 100.000 30 0 0 849 878 33864791 33864762 4.240000e-04 56.5
21 TraesCS7A01G108900 chr1D 78.112 498 54 30 1767 2234 478816783 478817255 6.480000e-67 265.0
22 TraesCS7A01G108900 chr1D 96.774 31 1 0 846 876 59822428 59822458 5.000000e-03 52.8
23 TraesCS7A01G108900 chr3B 79.890 363 59 11 894 1248 160126855 160126499 1.400000e-63 254.0
24 TraesCS7A01G108900 chr3B 94.286 35 2 0 844 878 581090061 581090095 2.000000e-03 54.7
25 TraesCS7A01G108900 chr3B 100.000 28 0 0 781 808 796307008 796306981 5.000000e-03 52.8
26 TraesCS7A01G108900 chr2A 91.813 171 11 3 2672 2841 89495383 89495215 5.080000e-58 235.0
27 TraesCS7A01G108900 chr2A 91.129 124 7 4 2926 3047 687932139 687932018 6.760000e-37 165.0
28 TraesCS7A01G108900 chr2A 97.059 34 1 0 780 813 41755350 41755317 1.180000e-04 58.4
29 TraesCS7A01G108900 chr2A 100.000 28 0 0 2583 2610 80585302 80585329 5.000000e-03 52.8
30 TraesCS7A01G108900 chr2B 91.875 160 12 1 2672 2831 787801299 787801141 3.950000e-54 222.0
31 TraesCS7A01G108900 chr2B 93.750 96 5 1 2491 2586 501689185 501689091 3.170000e-30 143.0
32 TraesCS7A01G108900 chr1B 76.471 493 63 29 1772 2234 666823804 666824273 5.110000e-53 219.0
33 TraesCS7A01G108900 chr1B 90.244 164 15 1 2672 2835 647545158 647545320 2.380000e-51 213.0
34 TraesCS7A01G108900 chr1B 88.034 117 8 2 2472 2583 6542446 6542561 1.910000e-27 134.0
35 TraesCS7A01G108900 chr1B 100.000 29 0 0 785 813 632635959 632635931 2.000000e-03 54.7
36 TraesCS7A01G108900 chr5B 91.250 160 13 1 2672 2831 594153551 594153393 1.840000e-52 217.0
37 TraesCS7A01G108900 chr4A 90.741 162 14 1 2672 2833 659211171 659211011 6.620000e-52 215.0
38 TraesCS7A01G108900 chr4A 91.489 47 4 0 829 875 663855309 663855263 7.050000e-07 65.8
39 TraesCS7A01G108900 chr4A 96.875 32 1 0 844 875 15911625 15911594 2.000000e-03 54.7
40 TraesCS7A01G108900 chr1A 75.771 454 63 28 1798 2226 574935359 574935790 5.190000e-43 185.0
41 TraesCS7A01G108900 chr1A 100.000 30 0 0 849 878 517330167 517330196 4.240000e-04 56.5
42 TraesCS7A01G108900 chr5A 95.699 93 3 1 2492 2583 654405624 654405716 6.810000e-32 148.0
43 TraesCS7A01G108900 chr2D 93.750 96 5 1 2491 2586 191678598 191678504 3.170000e-30 143.0
44 TraesCS7A01G108900 chr2D 79.167 96 9 6 781 875 32304155 32304070 4.240000e-04 56.5
45 TraesCS7A01G108900 chr2D 100.000 29 0 0 850 878 194808356 194808384 2.000000e-03 54.7
46 TraesCS7A01G108900 chr5D 93.684 95 5 1 2492 2586 55892427 55892334 1.140000e-29 141.0
47 TraesCS7A01G108900 chr4D 93.684 95 5 1 2492 2586 96888358 96888265 1.140000e-29 141.0
48 TraesCS7A01G108900 chr6A 100.000 33 0 0 781 813 609271565 609271533 9.120000e-06 62.1
49 TraesCS7A01G108900 chr6A 94.444 36 1 1 782 816 121618998 121619033 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G108900 chr7A 66227020 66230066 3046 True 5627.000000 5627 100.000000 1 3047 1 chr7A.!!$R1 3046
1 TraesCS7A01G108900 chr7D 63435370 63440118 4748 True 682.250000 1877 91.259500 3 3047 4 chr7D.!!$R2 3044
2 TraesCS7A01G108900 chr7B 3794740 3797670 2930 True 903.966667 1831 86.809333 40 3047 3 chr7B.!!$R3 3007
3 TraesCS7A01G108900 chr6B 148827696 148828558 862 False 693.000000 693 81.880000 1278 2125 1 chr6B.!!$F1 847
4 TraesCS7A01G108900 chr3D 575922810 575923598 788 True 599.000000 599 80.660000 1282 2125 1 chr3D.!!$R2 843

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
276 2382 0.037232 GTGTTCGTTCTGGGAGGGAG 60.037 60.0 0.0 0.0 0.0 4.30 F
873 3014 0.042131 TGTTATGGGACGGAGGGAGT 59.958 55.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1174 3627 0.603065 GGAAACCCCAGTCACAATGC 59.397 55.0 0.0 0.0 34.14 3.56 R
2814 5421 0.252103 TGCTACTCCCTCCGTCCTTT 60.252 55.0 0.0 0.0 0.00 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 2186 3.310860 TTTCCCGAAGCCTCCTCGC 62.311 63.158 0.00 0.00 0.00 5.03
121 2227 1.810030 GTGAGCACGACGAATCCCC 60.810 63.158 0.00 0.00 0.00 4.81
275 2381 1.812686 CGTGTTCGTTCTGGGAGGGA 61.813 60.000 0.00 0.00 0.00 4.20
276 2382 0.037232 GTGTTCGTTCTGGGAGGGAG 60.037 60.000 0.00 0.00 0.00 4.30
279 2385 3.083997 CGTTCTGGGAGGGAGGGG 61.084 72.222 0.00 0.00 0.00 4.79
280 2386 3.412408 GTTCTGGGAGGGAGGGGC 61.412 72.222 0.00 0.00 0.00 5.80
318 2442 2.046217 GCTCTTGACCGGGTTCCC 60.046 66.667 6.32 0.00 0.00 3.97
390 2514 1.351350 GATGGATGGGCTAGGGTTACC 59.649 57.143 0.00 0.00 0.00 2.85
511 2636 4.625742 ACGTCTTGGTCGATTTGTTGATAG 59.374 41.667 0.00 0.00 0.00 2.08
547 2672 0.611618 TTGTTCATGGCGGCAGGATT 60.612 50.000 27.12 1.23 0.00 3.01
560 2685 3.084786 GGCAGGATTAGGCATTGGTATC 58.915 50.000 0.00 0.00 0.00 2.24
576 2701 2.169769 GGTATCGTGTTCCTGGATTCCA 59.830 50.000 5.05 5.05 30.58 3.53
585 2710 3.838244 TCCTGGATTCCAATTCGTAGG 57.162 47.619 6.88 2.80 30.80 3.18
629 2758 4.565166 GTGGTTACAAGTTTTGGTTGCTTC 59.435 41.667 0.00 0.00 34.12 3.86
630 2759 4.464597 TGGTTACAAGTTTTGGTTGCTTCT 59.535 37.500 0.00 0.00 34.12 2.85
641 2770 7.922811 AGTTTTGGTTGCTTCTAGAAGAAAATG 59.077 33.333 32.16 9.47 37.68 2.32
643 2772 4.218417 TGGTTGCTTCTAGAAGAAAATGGC 59.782 41.667 32.16 17.30 37.68 4.40
684 2813 1.682087 GGCTAAAATCCCTTCGGTGCT 60.682 52.381 0.00 0.00 0.00 4.40
685 2814 2.092323 GCTAAAATCCCTTCGGTGCTT 58.908 47.619 0.00 0.00 0.00 3.91
686 2815 2.159379 GCTAAAATCCCTTCGGTGCTTG 60.159 50.000 0.00 0.00 0.00 4.01
687 2816 0.603065 AAAATCCCTTCGGTGCTTGC 59.397 50.000 0.00 0.00 0.00 4.01
712 2842 7.067008 GCTTTTATGGTAATTAGGACTCTGCAA 59.933 37.037 0.00 0.00 0.00 4.08
714 2844 9.474313 TTTTATGGTAATTAGGACTCTGCAATT 57.526 29.630 0.00 0.00 0.00 2.32
716 2846 6.313519 TGGTAATTAGGACTCTGCAATTCT 57.686 37.500 0.00 0.00 0.00 2.40
717 2847 6.115446 TGGTAATTAGGACTCTGCAATTCTG 58.885 40.000 0.00 0.00 0.00 3.02
738 2868 1.064505 CACTACGCAGATTGCATTGGG 59.935 52.381 1.69 8.31 45.36 4.12
740 2870 1.745087 CTACGCAGATTGCATTGGGTT 59.255 47.619 17.05 6.26 45.36 4.11
741 2871 0.968405 ACGCAGATTGCATTGGGTTT 59.032 45.000 9.34 0.00 45.36 3.27
747 2882 3.007182 CAGATTGCATTGGGTTTCCTTGT 59.993 43.478 0.00 0.00 0.00 3.16
754 2889 5.719085 TGCATTGGGTTTCCTTGTGTATAAT 59.281 36.000 0.00 0.00 0.00 1.28
755 2890 6.127479 TGCATTGGGTTTCCTTGTGTATAATC 60.127 38.462 0.00 0.00 0.00 1.75
756 2891 6.494842 CATTGGGTTTCCTTGTGTATAATCG 58.505 40.000 0.00 0.00 0.00 3.34
760 2895 5.329493 GGTTTCCTTGTGTATAATCGTTGC 58.671 41.667 0.00 0.00 0.00 4.17
761 2896 5.329493 GTTTCCTTGTGTATAATCGTTGCC 58.671 41.667 0.00 0.00 0.00 4.52
762 2897 4.209307 TCCTTGTGTATAATCGTTGCCA 57.791 40.909 0.00 0.00 0.00 4.92
767 2908 6.472163 CCTTGTGTATAATCGTTGCCATTTTC 59.528 38.462 0.00 0.00 0.00 2.29
768 2909 6.502136 TGTGTATAATCGTTGCCATTTTCA 57.498 33.333 0.00 0.00 0.00 2.69
790 2931 9.595823 TTTCAAAAGATATTAACTACTCCCTCG 57.404 33.333 0.00 0.00 0.00 4.63
791 2932 7.723324 TCAAAAGATATTAACTACTCCCTCGG 58.277 38.462 0.00 0.00 0.00 4.63
792 2933 7.343833 TCAAAAGATATTAACTACTCCCTCGGT 59.656 37.037 0.00 0.00 0.00 4.69
793 2934 7.672122 AAAGATATTAACTACTCCCTCGGTT 57.328 36.000 0.00 0.00 0.00 4.44
794 2935 6.897706 AGATATTAACTACTCCCTCGGTTC 57.102 41.667 0.00 0.00 0.00 3.62
795 2936 5.774184 AGATATTAACTACTCCCTCGGTTCC 59.226 44.000 0.00 0.00 0.00 3.62
796 2937 2.905415 TAACTACTCCCTCGGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
797 2938 2.249309 AACTACTCCCTCGGTTCCAT 57.751 50.000 0.00 0.00 0.00 3.41
798 2939 3.393426 AACTACTCCCTCGGTTCCATA 57.607 47.619 0.00 0.00 0.00 2.74
799 2940 3.393426 ACTACTCCCTCGGTTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
800 2941 3.924922 ACTACTCCCTCGGTTCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
801 2942 5.070823 ACTACTCCCTCGGTTCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
802 2943 5.652324 ACTACTCCCTCGGTTCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
803 2944 6.797707 ACTACTCCCTCGGTTCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
804 2945 7.243824 ACTACTCCCTCGGTTCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
805 2946 6.607004 ACTCCCTCGGTTCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
806 2947 6.320518 ACTCCCTCGGTTCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
807 2948 6.437793 ACTCCCTCGGTTCCATAATATAAGAG 59.562 42.308 0.00 0.00 0.00 2.85
808 2949 5.187186 TCCCTCGGTTCCATAATATAAGAGC 59.813 44.000 0.00 0.00 0.00 4.09
809 2950 5.103000 CCTCGGTTCCATAATATAAGAGCG 58.897 45.833 0.00 0.00 0.00 5.03
810 2951 5.336531 CCTCGGTTCCATAATATAAGAGCGT 60.337 44.000 0.00 0.00 0.00 5.07
811 2952 6.092955 TCGGTTCCATAATATAAGAGCGTT 57.907 37.500 0.00 0.00 0.00 4.84
812 2953 6.518493 TCGGTTCCATAATATAAGAGCGTTT 58.482 36.000 0.00 0.00 0.00 3.60
813 2954 6.643770 TCGGTTCCATAATATAAGAGCGTTTC 59.356 38.462 0.00 0.00 0.00 2.78
814 2955 6.645415 CGGTTCCATAATATAAGAGCGTTTCT 59.355 38.462 0.00 0.00 37.93 2.52
815 2956 7.359264 CGGTTCCATAATATAAGAGCGTTTCTG 60.359 40.741 0.00 0.00 35.91 3.02
816 2957 7.291567 GTTCCATAATATAAGAGCGTTTCTGC 58.708 38.462 0.00 0.00 35.91 4.26
817 2958 5.633601 TCCATAATATAAGAGCGTTTCTGCG 59.366 40.000 0.00 0.00 40.67 5.18
818 2959 5.405571 CCATAATATAAGAGCGTTTCTGCGT 59.594 40.000 0.00 0.00 40.67 5.24
819 2960 6.073765 CCATAATATAAGAGCGTTTCTGCGTT 60.074 38.462 0.00 0.00 40.67 4.84
820 2961 5.796350 AATATAAGAGCGTTTCTGCGTTT 57.204 34.783 0.00 0.00 40.67 3.60
821 2962 5.796350 ATATAAGAGCGTTTCTGCGTTTT 57.204 34.783 0.00 0.00 40.67 2.43
822 2963 2.844122 AAGAGCGTTTCTGCGTTTTT 57.156 40.000 0.00 0.00 40.67 1.94
823 2964 2.105323 AGAGCGTTTCTGCGTTTTTG 57.895 45.000 0.00 0.00 40.67 2.44
824 2965 1.668751 AGAGCGTTTCTGCGTTTTTGA 59.331 42.857 0.00 0.00 40.67 2.69
825 2966 1.773525 GAGCGTTTCTGCGTTTTTGAC 59.226 47.619 0.00 0.00 40.67 3.18
826 2967 1.131504 AGCGTTTCTGCGTTTTTGACA 59.868 42.857 0.00 0.00 40.67 3.58
827 2968 1.251762 GCGTTTCTGCGTTTTTGACAC 59.748 47.619 0.00 0.00 0.00 3.67
828 2969 1.507120 CGTTTCTGCGTTTTTGACACG 59.493 47.619 0.00 0.00 40.75 4.49
829 2970 2.511879 GTTTCTGCGTTTTTGACACGT 58.488 42.857 0.00 0.00 39.92 4.49
830 2971 2.166741 TTCTGCGTTTTTGACACGTG 57.833 45.000 15.48 15.48 39.92 4.49
831 2972 1.080298 TCTGCGTTTTTGACACGTGT 58.920 45.000 23.64 23.64 39.92 4.49
832 2973 1.061421 TCTGCGTTTTTGACACGTGTC 59.939 47.619 36.01 36.01 44.97 3.67
841 2982 3.589639 GACACGTGTCAAAAACGCA 57.410 47.368 37.16 0.00 44.80 5.24
842 2983 1.452717 GACACGTGTCAAAAACGCAG 58.547 50.000 37.16 1.27 44.80 5.18
843 2984 1.061421 GACACGTGTCAAAAACGCAGA 59.939 47.619 37.16 0.00 44.80 4.26
844 2985 1.465387 ACACGTGTCAAAAACGCAGAA 59.535 42.857 17.22 0.00 44.80 3.02
845 2986 2.095668 ACACGTGTCAAAAACGCAGAAA 60.096 40.909 17.22 0.00 44.80 2.52
846 2987 2.275253 CACGTGTCAAAAACGCAGAAAC 59.725 45.455 7.58 0.00 44.80 2.78
847 2988 2.095668 ACGTGTCAAAAACGCAGAAACA 60.096 40.909 0.00 0.00 44.80 2.83
848 2989 2.275253 CGTGTCAAAAACGCAGAAACAC 59.725 45.455 0.00 0.00 38.34 3.32
849 2990 3.498082 GTGTCAAAAACGCAGAAACACT 58.502 40.909 0.00 0.00 38.31 3.55
850 2991 3.542310 GTGTCAAAAACGCAGAAACACTC 59.458 43.478 0.00 0.00 38.31 3.51
851 2992 3.438781 TGTCAAAAACGCAGAAACACTCT 59.561 39.130 0.00 0.00 33.23 3.24
852 2993 4.083003 TGTCAAAAACGCAGAAACACTCTT 60.083 37.500 0.00 0.00 29.07 2.85
853 2994 5.122554 TGTCAAAAACGCAGAAACACTCTTA 59.877 36.000 0.00 0.00 29.07 2.10
854 2995 6.183360 TGTCAAAAACGCAGAAACACTCTTAT 60.183 34.615 0.00 0.00 29.07 1.73
855 2996 6.140737 GTCAAAAACGCAGAAACACTCTTATG 59.859 38.462 0.00 0.00 29.07 1.90
856 2997 5.751243 AAAACGCAGAAACACTCTTATGT 57.249 34.783 0.00 0.00 29.07 2.29
857 2998 5.751243 AAACGCAGAAACACTCTTATGTT 57.249 34.783 0.00 0.00 44.76 2.71
858 2999 6.854496 AAACGCAGAAACACTCTTATGTTA 57.146 33.333 0.00 0.00 42.01 2.41
859 3000 7.435068 AAACGCAGAAACACTCTTATGTTAT 57.565 32.000 0.00 0.00 42.01 1.89
860 3001 6.408858 ACGCAGAAACACTCTTATGTTATG 57.591 37.500 0.00 0.00 42.01 1.90
861 3002 5.351465 ACGCAGAAACACTCTTATGTTATGG 59.649 40.000 0.00 0.00 42.01 2.74
862 3003 5.220662 CGCAGAAACACTCTTATGTTATGGG 60.221 44.000 0.00 0.00 42.01 4.00
863 3004 5.880332 GCAGAAACACTCTTATGTTATGGGA 59.120 40.000 0.00 0.00 42.01 4.37
864 3005 6.183360 GCAGAAACACTCTTATGTTATGGGAC 60.183 42.308 0.00 0.00 42.01 4.46
865 3006 6.036083 CAGAAACACTCTTATGTTATGGGACG 59.964 42.308 0.00 0.00 42.01 4.79
866 3007 4.402056 ACACTCTTATGTTATGGGACGG 57.598 45.455 0.00 0.00 0.00 4.79
867 3008 4.028131 ACACTCTTATGTTATGGGACGGA 58.972 43.478 0.00 0.00 0.00 4.69
868 3009 4.099573 ACACTCTTATGTTATGGGACGGAG 59.900 45.833 0.00 0.00 0.00 4.63
869 3010 3.641906 ACTCTTATGTTATGGGACGGAGG 59.358 47.826 0.00 0.00 0.00 4.30
870 3011 2.969950 TCTTATGTTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
871 3012 2.779429 TATGTTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
872 3013 1.424638 ATGTTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
873 3014 0.042131 TGTTATGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
874 3015 1.288633 TGTTATGGGACGGAGGGAGTA 59.711 52.381 0.00 0.00 0.00 2.59
875 3016 2.292389 TGTTATGGGACGGAGGGAGTAA 60.292 50.000 0.00 0.00 0.00 2.24
876 3017 2.970640 GTTATGGGACGGAGGGAGTAAT 59.029 50.000 0.00 0.00 0.00 1.89
877 3018 4.154942 GTTATGGGACGGAGGGAGTAATA 58.845 47.826 0.00 0.00 0.00 0.98
878 3019 2.077687 TGGGACGGAGGGAGTAATAC 57.922 55.000 0.00 0.00 0.00 1.89
879 3020 1.572415 TGGGACGGAGGGAGTAATACT 59.428 52.381 0.00 0.00 0.00 2.12
880 3021 2.023695 TGGGACGGAGGGAGTAATACTT 60.024 50.000 0.00 0.00 0.00 2.24
881 3022 2.364647 GGGACGGAGGGAGTAATACTTG 59.635 54.545 0.00 0.00 0.00 3.16
892 3033 4.438744 GGAGTAATACTTGTTGTGGCATGC 60.439 45.833 9.90 9.90 0.00 4.06
897 3038 2.034124 ACTTGTTGTGGCATGCTCTTT 58.966 42.857 18.92 0.00 0.00 2.52
900 3041 1.005294 GTTGTGGCATGCTCTTTGCG 61.005 55.000 18.92 0.00 46.63 4.85
903 3044 1.302752 TGGCATGCTCTTTGCGACT 60.303 52.632 18.92 0.00 46.63 4.18
922 3063 6.422776 CGACTAGCAACTCCATTAATGTTT 57.577 37.500 14.25 2.07 0.00 2.83
924 3065 7.305474 CGACTAGCAACTCCATTAATGTTTTT 58.695 34.615 14.25 1.40 0.00 1.94
1122 3574 6.311935 GTGTTGAATGCCGAATGTTAGTACTA 59.688 38.462 0.00 0.00 0.00 1.82
1123 3575 6.311935 TGTTGAATGCCGAATGTTAGTACTAC 59.688 38.462 0.91 0.00 0.00 2.73
1131 3583 5.803967 CCGAATGTTAGTACTACCTTCACAC 59.196 44.000 0.91 0.00 0.00 3.82
1143 3596 2.681344 ACCTTCACACGTTTTCCTGTTC 59.319 45.455 0.00 0.00 0.00 3.18
1155 3608 6.208599 ACGTTTTCCTGTTCATTGGTTGATAT 59.791 34.615 0.00 0.00 33.34 1.63
1168 3621 5.581350 TGGTTGATATTGGATGGCTATCA 57.419 39.130 12.54 0.00 34.90 2.15
1174 3627 7.933215 TGATATTGGATGGCTATCAATTCAG 57.067 36.000 12.54 0.00 34.90 3.02
1237 3695 3.009363 TGAAGAATCTGATTGGTGAGGCA 59.991 43.478 7.78 0.00 0.00 4.75
1270 3728 1.174712 GCCAGGAAAGCTTCAGCACA 61.175 55.000 0.00 0.00 45.16 4.57
1279 3737 1.602377 AGCTTCAGCACAACCGTAAAC 59.398 47.619 0.75 0.00 45.16 2.01
1294 3752 4.099380 CGTAAACGGTATGCCCAAAATT 57.901 40.909 0.00 0.00 35.37 1.82
1333 3792 7.284034 CAGATTTTACCTCCTAATGCAGATGTT 59.716 37.037 0.00 0.00 0.00 2.71
1367 3829 4.833478 TCTCAGCTAGAAATTTGGCTCT 57.167 40.909 0.00 0.00 32.30 4.09
1377 3839 6.305272 AGAAATTTGGCTCTAGACATCTCA 57.695 37.500 0.00 0.00 30.06 3.27
1399 3861 9.703892 TCTCAATTGTTTTTGTTTCTTCTCAAA 57.296 25.926 5.13 0.00 32.75 2.69
1415 3877 6.936900 TCTTCTCAAACTAATGCTTACAGCTT 59.063 34.615 0.00 0.00 42.97 3.74
1418 3880 8.615878 TCTCAAACTAATGCTTACAGCTTTAA 57.384 30.769 5.80 0.00 42.97 1.52
1433 3897 5.189934 ACAGCTTTAAGAACAGGGTATAGCT 59.810 40.000 1.32 0.00 33.95 3.32
1474 3948 5.046735 ACAGCCATGTCCATCTCATATACTC 60.047 44.000 0.00 0.00 32.99 2.59
1475 3949 5.187381 CAGCCATGTCCATCTCATATACTCT 59.813 44.000 0.00 0.00 0.00 3.24
1476 3950 5.784390 AGCCATGTCCATCTCATATACTCTT 59.216 40.000 0.00 0.00 0.00 2.85
1477 3951 5.873712 GCCATGTCCATCTCATATACTCTTG 59.126 44.000 0.00 0.00 0.00 3.02
1478 3952 6.404708 CCATGTCCATCTCATATACTCTTGG 58.595 44.000 0.00 0.00 0.00 3.61
1479 3953 6.404708 CATGTCCATCTCATATACTCTTGGG 58.595 44.000 0.00 0.00 0.00 4.12
1480 3954 4.840680 TGTCCATCTCATATACTCTTGGGG 59.159 45.833 0.00 0.00 0.00 4.96
1481 3955 4.223923 GTCCATCTCATATACTCTTGGGGG 59.776 50.000 0.00 0.00 0.00 5.40
1482 3956 4.140447 TCCATCTCATATACTCTTGGGGGT 60.140 45.833 0.00 0.00 0.00 4.95
1530 4022 1.227118 GAAGCAGAGCCGAGGTAGC 60.227 63.158 0.00 0.00 0.00 3.58
1549 4041 9.712305 GAGGTAGCAATCATGTACAGTTATATT 57.288 33.333 0.33 0.00 0.00 1.28
1611 4104 1.135094 AGGTCATGTGGCTCCCTATG 58.865 55.000 0.00 0.00 0.00 2.23
1615 4108 3.118038 GGTCATGTGGCTCCCTATGTTTA 60.118 47.826 0.00 0.00 0.00 2.01
1616 4109 4.446311 GGTCATGTGGCTCCCTATGTTTAT 60.446 45.833 0.00 0.00 0.00 1.40
1617 4110 4.757149 GTCATGTGGCTCCCTATGTTTATC 59.243 45.833 0.00 0.00 0.00 1.75
1618 4111 3.469008 TGTGGCTCCCTATGTTTATCG 57.531 47.619 0.00 0.00 0.00 2.92
1619 4112 2.769663 TGTGGCTCCCTATGTTTATCGT 59.230 45.455 0.00 0.00 0.00 3.73
1620 4113 3.131396 GTGGCTCCCTATGTTTATCGTG 58.869 50.000 0.00 0.00 0.00 4.35
1668 4161 4.241590 TGAAACAAACCTGCATCATCAC 57.758 40.909 0.00 0.00 0.00 3.06
1735 4228 3.712733 ACAGTGTTGTAGAGGGTTAACCA 59.287 43.478 25.71 2.37 37.48 3.67
1803 4304 7.332557 TGTAAAGGAAACAGTGTTCAGTAGAA 58.667 34.615 9.40 0.00 0.00 2.10
1832 4334 2.749621 CCCTTGCTGACCTACATGTTTC 59.250 50.000 2.30 0.00 0.00 2.78
1902 4413 9.851686 TGAGCCTATTGATATGTAAGTCAAATT 57.148 29.630 0.00 0.00 37.82 1.82
2025 4546 2.585869 CGAGCGCGTCAACACTGTT 61.586 57.895 8.43 0.00 0.00 3.16
2128 4649 3.915575 CTGCCACCTTCAGCCATC 58.084 61.111 0.00 0.00 0.00 3.51
2129 4650 1.751927 CTGCCACCTTCAGCCATCC 60.752 63.158 0.00 0.00 0.00 3.51
2136 4657 1.207791 CCTTCAGCCATCCCTGTAGT 58.792 55.000 0.00 0.00 34.47 2.73
2141 4662 1.132500 AGCCATCCCTGTAGTTAGCC 58.868 55.000 0.00 0.00 0.00 3.93
2247 4780 4.465632 AATAGTAGTGTTGCATGTCCGA 57.534 40.909 0.00 0.00 0.00 4.55
2269 4802 7.510343 TCCGATGTGTATGGATCCATCATATAT 59.490 37.037 30.61 19.44 37.82 0.86
2292 4825 4.654262 TGAGACTGTAAGGTTGGTTCTCTT 59.346 41.667 0.00 0.00 39.30 2.85
2329 4865 9.927081 ATCATGGTTGAGATTAGGACTAATTTT 57.073 29.630 6.08 0.00 33.33 1.82
2330 4866 9.753674 TCATGGTTGAGATTAGGACTAATTTTT 57.246 29.630 6.08 0.00 36.02 1.94
2473 5080 5.179452 AGAATAAGCTTGCAGGTTAAGGA 57.821 39.130 9.86 0.00 40.94 3.36
2477 5084 4.576330 AAGCTTGCAGGTTAAGGAGTAT 57.424 40.909 0.00 0.00 33.64 2.12
2478 5085 4.576330 AGCTTGCAGGTTAAGGAGTATT 57.424 40.909 0.00 0.00 0.00 1.89
2479 5086 4.518249 AGCTTGCAGGTTAAGGAGTATTC 58.482 43.478 0.00 0.00 0.00 1.75
2480 5087 3.628032 GCTTGCAGGTTAAGGAGTATTCC 59.372 47.826 0.00 0.00 44.39 3.01
2481 5088 3.926058 TGCAGGTTAAGGAGTATTCCC 57.074 47.619 0.00 0.00 45.24 3.97
2482 5089 3.460825 TGCAGGTTAAGGAGTATTCCCT 58.539 45.455 0.00 0.00 45.24 4.20
2483 5090 3.454812 TGCAGGTTAAGGAGTATTCCCTC 59.545 47.826 0.00 0.00 45.24 4.30
2484 5091 3.712218 GCAGGTTAAGGAGTATTCCCTCT 59.288 47.826 0.00 0.00 45.24 3.69
2485 5092 4.443598 GCAGGTTAAGGAGTATTCCCTCTG 60.444 50.000 0.00 3.70 45.24 3.35
2486 5093 4.717280 CAGGTTAAGGAGTATTCCCTCTGT 59.283 45.833 0.00 0.00 45.24 3.41
2487 5094 4.963628 AGGTTAAGGAGTATTCCCTCTGTC 59.036 45.833 0.00 0.00 45.24 3.51
2488 5095 4.101274 GGTTAAGGAGTATTCCCTCTGTCC 59.899 50.000 0.00 0.00 45.24 4.02
2489 5096 3.786213 AAGGAGTATTCCCTCTGTCCT 57.214 47.619 0.00 0.00 45.24 3.85
2490 5097 3.039252 AGGAGTATTCCCTCTGTCCTG 57.961 52.381 0.00 0.00 45.24 3.86
2491 5098 2.587777 AGGAGTATTCCCTCTGTCCTGA 59.412 50.000 0.00 0.00 45.24 3.86
2492 5099 2.962421 GGAGTATTCCCTCTGTCCTGAG 59.038 54.545 0.00 0.00 37.53 3.35
2493 5100 3.628769 GGAGTATTCCCTCTGTCCTGAGT 60.629 52.174 0.00 0.00 37.53 3.41
2494 5101 3.370104 AGTATTCCCTCTGTCCTGAGTG 58.630 50.000 1.31 0.00 32.50 3.51
2495 5102 2.334006 ATTCCCTCTGTCCTGAGTGT 57.666 50.000 1.31 0.00 32.50 3.55
2496 5103 2.992847 TTCCCTCTGTCCTGAGTGTA 57.007 50.000 1.31 0.00 32.50 2.90
2497 5104 2.217510 TCCCTCTGTCCTGAGTGTAC 57.782 55.000 1.31 0.00 32.50 2.90
2498 5105 1.711375 TCCCTCTGTCCTGAGTGTACT 59.289 52.381 0.00 0.00 32.50 2.73
2499 5106 2.110188 TCCCTCTGTCCTGAGTGTACTT 59.890 50.000 0.00 0.00 32.50 2.24
2500 5107 2.900546 CCCTCTGTCCTGAGTGTACTTT 59.099 50.000 0.00 0.00 32.50 2.66
2501 5108 3.056465 CCCTCTGTCCTGAGTGTACTTTC 60.056 52.174 0.00 0.00 32.50 2.62
2502 5109 3.574396 CCTCTGTCCTGAGTGTACTTTCA 59.426 47.826 0.00 0.00 32.50 2.69
2503 5110 4.039245 CCTCTGTCCTGAGTGTACTTTCAA 59.961 45.833 0.00 0.00 32.50 2.69
2504 5111 4.945246 TCTGTCCTGAGTGTACTTTCAAC 58.055 43.478 0.00 0.00 0.00 3.18
2505 5112 4.649674 TCTGTCCTGAGTGTACTTTCAACT 59.350 41.667 0.00 0.00 0.00 3.16
2506 5113 5.128827 TCTGTCCTGAGTGTACTTTCAACTT 59.871 40.000 0.00 0.00 0.00 2.66
2507 5114 5.741011 TGTCCTGAGTGTACTTTCAACTTT 58.259 37.500 0.00 0.00 0.00 2.66
2508 5115 5.584649 TGTCCTGAGTGTACTTTCAACTTTG 59.415 40.000 0.00 0.00 0.00 2.77
2509 5116 5.585047 GTCCTGAGTGTACTTTCAACTTTGT 59.415 40.000 0.00 0.00 0.00 2.83
2510 5117 6.093633 GTCCTGAGTGTACTTTCAACTTTGTT 59.906 38.462 0.00 0.00 0.00 2.83
2511 5118 6.657541 TCCTGAGTGTACTTTCAACTTTGTTT 59.342 34.615 0.00 0.00 0.00 2.83
2512 5119 6.747280 CCTGAGTGTACTTTCAACTTTGTTTG 59.253 38.462 0.00 0.00 0.00 2.93
2513 5120 7.361713 CCTGAGTGTACTTTCAACTTTGTTTGA 60.362 37.037 0.00 0.00 33.55 2.69
2514 5121 7.877003 TGAGTGTACTTTCAACTTTGTTTGAA 58.123 30.769 0.00 0.00 42.47 2.69
2573 5180 8.072321 ACAATAATACACCAACATTTATGCCA 57.928 30.769 0.00 0.00 0.00 4.92
2574 5181 8.703743 ACAATAATACACCAACATTTATGCCAT 58.296 29.630 0.00 0.00 0.00 4.40
2575 5182 9.195411 CAATAATACACCAACATTTATGCCATC 57.805 33.333 0.00 0.00 0.00 3.51
2576 5183 6.788598 AATACACCAACATTTATGCCATCA 57.211 33.333 0.00 0.00 0.00 3.07
2577 5184 6.788598 ATACACCAACATTTATGCCATCAA 57.211 33.333 0.00 0.00 0.00 2.57
2578 5185 5.480642 ACACCAACATTTATGCCATCAAA 57.519 34.783 0.00 0.00 0.00 2.69
2579 5186 6.052405 ACACCAACATTTATGCCATCAAAT 57.948 33.333 0.00 0.00 0.00 2.32
2580 5187 6.474630 ACACCAACATTTATGCCATCAAATT 58.525 32.000 0.00 0.00 0.00 1.82
2581 5188 7.619050 ACACCAACATTTATGCCATCAAATTA 58.381 30.769 0.00 0.00 0.00 1.40
2582 5189 7.765360 ACACCAACATTTATGCCATCAAATTAG 59.235 33.333 0.00 0.00 0.00 1.73
2583 5190 7.980662 CACCAACATTTATGCCATCAAATTAGA 59.019 33.333 0.00 0.00 0.00 2.10
2584 5191 8.538701 ACCAACATTTATGCCATCAAATTAGAA 58.461 29.630 0.00 0.00 0.00 2.10
2585 5192 9.037737 CCAACATTTATGCCATCAAATTAGAAG 57.962 33.333 0.00 0.00 0.00 2.85
2586 5193 9.806203 CAACATTTATGCCATCAAATTAGAAGA 57.194 29.630 0.00 0.00 0.00 2.87
2588 5195 9.976511 ACATTTATGCCATCAAATTAGAAGATG 57.023 29.630 0.00 0.00 39.02 2.90
2589 5196 8.922676 CATTTATGCCATCAAATTAGAAGATGC 58.077 33.333 0.00 0.00 38.21 3.91
2590 5197 7.828508 TTATGCCATCAAATTAGAAGATGCT 57.171 32.000 0.00 0.00 38.21 3.79
2591 5198 5.762825 TGCCATCAAATTAGAAGATGCTC 57.237 39.130 0.00 0.00 38.21 4.26
2592 5199 5.195185 TGCCATCAAATTAGAAGATGCTCA 58.805 37.500 0.00 0.00 38.21 4.26
2593 5200 5.831525 TGCCATCAAATTAGAAGATGCTCAT 59.168 36.000 0.00 0.00 38.21 2.90
2594 5201 6.999871 TGCCATCAAATTAGAAGATGCTCATA 59.000 34.615 0.00 0.00 38.21 2.15
2595 5202 7.668469 TGCCATCAAATTAGAAGATGCTCATAT 59.332 33.333 0.00 0.00 38.21 1.78
2596 5203 7.968956 GCCATCAAATTAGAAGATGCTCATATG 59.031 37.037 0.00 0.00 38.21 1.78
2597 5204 8.459635 CCATCAAATTAGAAGATGCTCATATGG 58.540 37.037 2.13 0.00 38.21 2.74
2598 5205 7.991084 TCAAATTAGAAGATGCTCATATGGG 57.009 36.000 2.13 0.00 0.00 4.00
2599 5206 7.520798 TCAAATTAGAAGATGCTCATATGGGT 58.479 34.615 4.11 0.00 0.00 4.51
2600 5207 8.659527 TCAAATTAGAAGATGCTCATATGGGTA 58.340 33.333 4.11 0.00 0.00 3.69
2601 5208 8.944029 CAAATTAGAAGATGCTCATATGGGTAG 58.056 37.037 4.11 0.00 0.00 3.18
2602 5209 6.611613 TTAGAAGATGCTCATATGGGTAGG 57.388 41.667 4.11 0.00 0.00 3.18
2603 5210 3.843027 AGAAGATGCTCATATGGGTAGGG 59.157 47.826 4.11 0.00 0.00 3.53
2604 5211 3.282135 AGATGCTCATATGGGTAGGGT 57.718 47.619 4.11 0.00 0.00 4.34
2605 5212 2.909006 AGATGCTCATATGGGTAGGGTG 59.091 50.000 4.11 0.00 0.00 4.61
2606 5213 2.190398 TGCTCATATGGGTAGGGTGT 57.810 50.000 4.11 0.00 0.00 4.16
2607 5214 1.768275 TGCTCATATGGGTAGGGTGTG 59.232 52.381 4.11 0.00 0.00 3.82
2608 5215 1.543429 GCTCATATGGGTAGGGTGTGC 60.543 57.143 4.11 0.00 0.00 4.57
2609 5216 0.756294 TCATATGGGTAGGGTGTGCG 59.244 55.000 2.13 0.00 0.00 5.34
2610 5217 0.756294 CATATGGGTAGGGTGTGCGA 59.244 55.000 0.00 0.00 0.00 5.10
2611 5218 1.048601 ATATGGGTAGGGTGTGCGAG 58.951 55.000 0.00 0.00 0.00 5.03
2612 5219 1.046472 TATGGGTAGGGTGTGCGAGG 61.046 60.000 0.00 0.00 0.00 4.63
2613 5220 3.782443 GGGTAGGGTGTGCGAGGG 61.782 72.222 0.00 0.00 0.00 4.30
2614 5221 2.682494 GGTAGGGTGTGCGAGGGA 60.682 66.667 0.00 0.00 0.00 4.20
2615 5222 2.064581 GGTAGGGTGTGCGAGGGAT 61.065 63.158 0.00 0.00 0.00 3.85
2616 5223 1.144057 GTAGGGTGTGCGAGGGATG 59.856 63.158 0.00 0.00 0.00 3.51
2617 5224 1.001120 TAGGGTGTGCGAGGGATGA 59.999 57.895 0.00 0.00 0.00 2.92
2618 5225 1.043116 TAGGGTGTGCGAGGGATGAG 61.043 60.000 0.00 0.00 0.00 2.90
2619 5226 2.660064 GGGTGTGCGAGGGATGAGT 61.660 63.158 0.00 0.00 0.00 3.41
2620 5227 1.448540 GGTGTGCGAGGGATGAGTG 60.449 63.158 0.00 0.00 0.00 3.51
2621 5228 1.293498 GTGTGCGAGGGATGAGTGT 59.707 57.895 0.00 0.00 0.00 3.55
2622 5229 1.016130 GTGTGCGAGGGATGAGTGTG 61.016 60.000 0.00 0.00 0.00 3.82
2623 5230 2.103042 GTGCGAGGGATGAGTGTGC 61.103 63.158 0.00 0.00 0.00 4.57
2624 5231 2.887568 GCGAGGGATGAGTGTGCG 60.888 66.667 0.00 0.00 0.00 5.34
2625 5232 2.573869 CGAGGGATGAGTGTGCGT 59.426 61.111 0.00 0.00 0.00 5.24
2626 5233 1.807165 CGAGGGATGAGTGTGCGTG 60.807 63.158 0.00 0.00 0.00 5.34
2627 5234 1.293498 GAGGGATGAGTGTGCGTGT 59.707 57.895 0.00 0.00 0.00 4.49
2628 5235 0.530744 GAGGGATGAGTGTGCGTGTA 59.469 55.000 0.00 0.00 0.00 2.90
2629 5236 1.137086 GAGGGATGAGTGTGCGTGTAT 59.863 52.381 0.00 0.00 0.00 2.29
2630 5237 1.134699 AGGGATGAGTGTGCGTGTATG 60.135 52.381 0.00 0.00 0.00 2.39
2631 5238 1.405526 GGGATGAGTGTGCGTGTATGT 60.406 52.381 0.00 0.00 0.00 2.29
2632 5239 2.159156 GGGATGAGTGTGCGTGTATGTA 60.159 50.000 0.00 0.00 0.00 2.29
2633 5240 3.492656 GGGATGAGTGTGCGTGTATGTAT 60.493 47.826 0.00 0.00 0.00 2.29
2634 5241 3.490896 GGATGAGTGTGCGTGTATGTATG 59.509 47.826 0.00 0.00 0.00 2.39
2635 5242 3.859411 TGAGTGTGCGTGTATGTATGA 57.141 42.857 0.00 0.00 0.00 2.15
2636 5243 3.769536 TGAGTGTGCGTGTATGTATGAG 58.230 45.455 0.00 0.00 0.00 2.90
2637 5244 3.192633 TGAGTGTGCGTGTATGTATGAGT 59.807 43.478 0.00 0.00 0.00 3.41
2638 5245 4.174009 GAGTGTGCGTGTATGTATGAGTT 58.826 43.478 0.00 0.00 0.00 3.01
2639 5246 3.926527 AGTGTGCGTGTATGTATGAGTTG 59.073 43.478 0.00 0.00 0.00 3.16
2640 5247 2.670905 TGTGCGTGTATGTATGAGTTGC 59.329 45.455 0.00 0.00 0.00 4.17
2641 5248 2.930040 GTGCGTGTATGTATGAGTTGCT 59.070 45.455 0.00 0.00 0.00 3.91
2642 5249 3.370978 GTGCGTGTATGTATGAGTTGCTT 59.629 43.478 0.00 0.00 0.00 3.91
2643 5250 3.370672 TGCGTGTATGTATGAGTTGCTTG 59.629 43.478 0.00 0.00 0.00 4.01
2644 5251 3.785505 GCGTGTATGTATGAGTTGCTTGC 60.786 47.826 0.00 0.00 0.00 4.01
2645 5252 3.370672 CGTGTATGTATGAGTTGCTTGCA 59.629 43.478 0.00 0.00 0.00 4.08
2646 5253 4.034394 CGTGTATGTATGAGTTGCTTGCAT 59.966 41.667 0.00 0.00 32.98 3.96
2647 5254 5.447683 CGTGTATGTATGAGTTGCTTGCATT 60.448 40.000 0.00 0.00 31.30 3.56
2648 5255 6.324819 GTGTATGTATGAGTTGCTTGCATTT 58.675 36.000 0.00 0.00 31.30 2.32
2649 5256 6.252015 GTGTATGTATGAGTTGCTTGCATTTG 59.748 38.462 0.00 0.00 31.30 2.32
2650 5257 4.852134 TGTATGAGTTGCTTGCATTTGT 57.148 36.364 0.00 0.00 0.00 2.83
2651 5258 5.956068 TGTATGAGTTGCTTGCATTTGTA 57.044 34.783 0.00 0.00 0.00 2.41
2652 5259 5.698832 TGTATGAGTTGCTTGCATTTGTAC 58.301 37.500 0.00 0.00 0.00 2.90
2653 5260 5.473162 TGTATGAGTTGCTTGCATTTGTACT 59.527 36.000 0.00 0.00 0.00 2.73
2654 5261 6.652900 TGTATGAGTTGCTTGCATTTGTACTA 59.347 34.615 0.00 0.00 0.00 1.82
2655 5262 6.764308 ATGAGTTGCTTGCATTTGTACTAT 57.236 33.333 0.00 0.00 0.00 2.12
2656 5263 5.941733 TGAGTTGCTTGCATTTGTACTATG 58.058 37.500 0.00 0.00 0.00 2.23
2657 5264 5.473162 TGAGTTGCTTGCATTTGTACTATGT 59.527 36.000 0.00 0.00 0.00 2.29
2658 5265 6.016360 TGAGTTGCTTGCATTTGTACTATGTT 60.016 34.615 0.00 0.00 0.00 2.71
2659 5266 6.381801 AGTTGCTTGCATTTGTACTATGTTC 58.618 36.000 0.00 0.00 0.00 3.18
2660 5267 5.956068 TGCTTGCATTTGTACTATGTTCA 57.044 34.783 9.34 0.11 0.00 3.18
2661 5268 5.941733 TGCTTGCATTTGTACTATGTTCAG 58.058 37.500 9.34 5.52 0.00 3.02
2662 5269 5.704978 TGCTTGCATTTGTACTATGTTCAGA 59.295 36.000 9.34 0.00 0.00 3.27
2663 5270 6.206438 TGCTTGCATTTGTACTATGTTCAGAA 59.794 34.615 9.34 0.00 0.00 3.02
2664 5271 7.083858 GCTTGCATTTGTACTATGTTCAGAAA 58.916 34.615 9.34 0.00 0.00 2.52
2665 5272 7.594758 GCTTGCATTTGTACTATGTTCAGAAAA 59.405 33.333 9.34 0.00 0.00 2.29
2666 5273 9.462174 CTTGCATTTGTACTATGTTCAGAAAAA 57.538 29.630 9.34 0.00 0.00 1.94
2771 5378 7.793927 TTTTTCACAAACTTGGACAAACTTT 57.206 28.000 0.00 0.00 0.00 2.66
2772 5379 6.777526 TTTCACAAACTTGGACAAACTTTG 57.222 33.333 0.00 0.00 0.00 2.77
2773 5380 5.713792 TCACAAACTTGGACAAACTTTGA 57.286 34.783 8.55 2.28 0.00 2.69
2774 5381 5.708948 TCACAAACTTGGACAAACTTTGAG 58.291 37.500 8.55 11.06 0.00 3.02
2775 5382 5.475220 TCACAAACTTGGACAAACTTTGAGA 59.525 36.000 8.55 12.49 0.00 3.27
2776 5383 6.152661 TCACAAACTTGGACAAACTTTGAGAT 59.847 34.615 8.55 0.00 0.00 2.75
2777 5384 7.338196 TCACAAACTTGGACAAACTTTGAGATA 59.662 33.333 8.55 0.00 0.00 1.98
2778 5385 7.645340 CACAAACTTGGACAAACTTTGAGATAG 59.355 37.037 8.55 3.51 0.00 2.08
2779 5386 7.339466 ACAAACTTGGACAAACTTTGAGATAGT 59.661 33.333 8.55 4.05 0.00 2.12
2780 5387 7.881775 AACTTGGACAAACTTTGAGATAGTT 57.118 32.000 8.55 8.95 37.43 2.24
2781 5388 7.881775 ACTTGGACAAACTTTGAGATAGTTT 57.118 32.000 8.55 0.00 44.38 2.66
2789 5396 5.167303 ACTTTGAGATAGTTTGACCCTCC 57.833 43.478 0.00 0.00 0.00 4.30
2790 5397 4.597507 ACTTTGAGATAGTTTGACCCTCCA 59.402 41.667 0.00 0.00 0.00 3.86
2791 5398 5.073144 ACTTTGAGATAGTTTGACCCTCCAA 59.927 40.000 0.00 0.00 0.00 3.53
2792 5399 4.553330 TGAGATAGTTTGACCCTCCAAC 57.447 45.455 0.00 0.00 0.00 3.77
2793 5400 3.907474 TGAGATAGTTTGACCCTCCAACA 59.093 43.478 0.00 0.00 0.00 3.33
2794 5401 4.349636 TGAGATAGTTTGACCCTCCAACAA 59.650 41.667 0.00 0.00 0.00 2.83
2795 5402 5.163141 TGAGATAGTTTGACCCTCCAACAAA 60.163 40.000 0.00 0.00 0.00 2.83
2796 5403 5.316987 AGATAGTTTGACCCTCCAACAAAG 58.683 41.667 0.00 0.00 34.86 2.77
2797 5404 3.382083 AGTTTGACCCTCCAACAAAGT 57.618 42.857 0.00 0.00 34.86 2.66
2798 5405 4.513406 AGTTTGACCCTCCAACAAAGTA 57.487 40.909 0.00 0.00 36.05 2.24
2799 5406 4.461198 AGTTTGACCCTCCAACAAAGTAG 58.539 43.478 0.00 0.00 36.05 2.57
2800 5407 4.165372 AGTTTGACCCTCCAACAAAGTAGA 59.835 41.667 0.00 0.00 36.05 2.59
2801 5408 4.781775 TTGACCCTCCAACAAAGTAGAA 57.218 40.909 0.00 0.00 0.00 2.10
2802 5409 4.781775 TGACCCTCCAACAAAGTAGAAA 57.218 40.909 0.00 0.00 0.00 2.52
2803 5410 4.714632 TGACCCTCCAACAAAGTAGAAAG 58.285 43.478 0.00 0.00 0.00 2.62
2804 5411 4.165372 TGACCCTCCAACAAAGTAGAAAGT 59.835 41.667 0.00 0.00 0.00 2.66
2805 5412 5.367352 TGACCCTCCAACAAAGTAGAAAGTA 59.633 40.000 0.00 0.00 0.00 2.24
2806 5413 5.618236 ACCCTCCAACAAAGTAGAAAGTAC 58.382 41.667 0.00 0.00 0.00 2.73
2807 5414 5.131475 ACCCTCCAACAAAGTAGAAAGTACA 59.869 40.000 0.00 0.00 0.00 2.90
2808 5415 5.469084 CCCTCCAACAAAGTAGAAAGTACAC 59.531 44.000 0.00 0.00 0.00 2.90
2809 5416 6.053005 CCTCCAACAAAGTAGAAAGTACACA 58.947 40.000 0.00 0.00 0.00 3.72
2810 5417 6.018180 CCTCCAACAAAGTAGAAAGTACACAC 60.018 42.308 0.00 0.00 0.00 3.82
2811 5418 6.646267 TCCAACAAAGTAGAAAGTACACACT 58.354 36.000 0.00 0.00 36.19 3.55
2823 5430 4.942761 AGTACACACTTTAAAGGACGGA 57.057 40.909 19.14 0.82 0.00 4.69
2824 5431 4.879598 AGTACACACTTTAAAGGACGGAG 58.120 43.478 19.14 7.12 0.00 4.63
2825 5432 3.121738 ACACACTTTAAAGGACGGAGG 57.878 47.619 19.14 4.41 0.00 4.30
2826 5433 2.224450 ACACACTTTAAAGGACGGAGGG 60.224 50.000 19.14 5.66 0.00 4.30
2827 5434 2.038033 CACACTTTAAAGGACGGAGGGA 59.962 50.000 19.14 0.00 0.00 4.20
2828 5435 2.302157 ACACTTTAAAGGACGGAGGGAG 59.698 50.000 19.14 0.00 0.00 4.30
2829 5436 2.302157 CACTTTAAAGGACGGAGGGAGT 59.698 50.000 19.14 0.00 0.00 3.85
2830 5437 3.512724 CACTTTAAAGGACGGAGGGAGTA 59.487 47.826 19.14 0.00 0.00 2.59
2841 5448 3.244770 ACGGAGGGAGTAGCAAAATTTGA 60.245 43.478 10.26 0.00 0.00 2.69
2842 5449 3.127030 CGGAGGGAGTAGCAAAATTTGAC 59.873 47.826 10.26 0.00 0.00 3.18
2843 5450 4.336280 GGAGGGAGTAGCAAAATTTGACT 58.664 43.478 10.26 4.85 0.00 3.41
2844 5451 5.497474 GGAGGGAGTAGCAAAATTTGACTA 58.503 41.667 10.26 7.69 0.00 2.59
2845 5452 6.122964 GGAGGGAGTAGCAAAATTTGACTAT 58.877 40.000 10.26 2.17 0.00 2.12
2846 5453 6.603599 GGAGGGAGTAGCAAAATTTGACTATT 59.396 38.462 10.26 7.28 0.00 1.73
2847 5454 7.773690 GGAGGGAGTAGCAAAATTTGACTATTA 59.226 37.037 10.26 0.00 0.00 0.98
2848 5455 9.343539 GAGGGAGTAGCAAAATTTGACTATTAT 57.656 33.333 10.26 2.26 0.00 1.28
2887 5494 5.352016 CACAAAAATGGCATTGGAAGTATGG 59.648 40.000 14.47 0.00 0.00 2.74
2940 5576 1.282157 AGTTCCCCTCCAGAAAATCCG 59.718 52.381 0.00 0.00 0.00 4.18
2987 5657 7.094805 TGTCAATCTACCAAGTACAAGAAATGC 60.095 37.037 0.00 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.643820 CCCGTTTTATGACGCGACTC 59.356 55.000 15.93 0.00 41.50 3.36
111 2217 1.476291 GGTATTGGGTGGGGATTCGTC 60.476 57.143 0.00 0.00 0.00 4.20
121 2227 2.572290 GGATTCGAAGGGTATTGGGTG 58.428 52.381 3.35 0.00 0.00 4.61
249 2355 0.246374 CAGAACGAACACGAATCGCG 60.246 55.000 1.15 0.00 43.88 5.87
318 2442 0.320421 AATCACGAAGACACCACCCG 60.320 55.000 0.00 0.00 0.00 5.28
390 2514 3.252458 ACGAGAACGAGAAAATTTTGGGG 59.748 43.478 8.47 0.00 42.66 4.96
398 2522 4.543692 AGAATTCGACGAGAACGAGAAAA 58.456 39.130 0.00 0.00 42.39 2.29
511 2636 1.877443 ACAACGCATCCACTACCAAAC 59.123 47.619 0.00 0.00 0.00 2.93
547 2672 2.769663 AGGAACACGATACCAATGCCTA 59.230 45.455 0.00 0.00 0.00 3.93
560 2685 2.095853 CGAATTGGAATCCAGGAACACG 59.904 50.000 0.86 1.05 33.81 4.49
576 2701 4.079253 AGCAAACCAATCACCTACGAATT 58.921 39.130 0.00 0.00 0.00 2.17
585 2710 5.156355 CACACAAGATAGCAAACCAATCAC 58.844 41.667 0.00 0.00 0.00 3.06
629 2758 2.083774 TGGCACGCCATTTTCTTCTAG 58.916 47.619 6.67 0.00 41.89 2.43
630 2759 2.083774 CTGGCACGCCATTTTCTTCTA 58.916 47.619 11.97 0.00 46.15 2.10
641 2770 2.182842 CCAAGCTATCTGGCACGCC 61.183 63.158 0.00 0.00 34.17 5.68
643 2772 1.137086 AGTACCAAGCTATCTGGCACG 59.863 52.381 2.67 0.00 34.17 5.34
684 2813 7.067008 GCAGAGTCCTAATTACCATAAAAGCAA 59.933 37.037 0.00 0.00 0.00 3.91
685 2814 6.542370 GCAGAGTCCTAATTACCATAAAAGCA 59.458 38.462 0.00 0.00 0.00 3.91
686 2815 6.542370 TGCAGAGTCCTAATTACCATAAAAGC 59.458 38.462 0.00 0.00 0.00 3.51
687 2816 8.506168 TTGCAGAGTCCTAATTACCATAAAAG 57.494 34.615 0.00 0.00 0.00 2.27
738 2868 5.106475 TGGCAACGATTATACACAAGGAAAC 60.106 40.000 0.00 0.00 42.51 2.78
740 2870 4.580868 TGGCAACGATTATACACAAGGAA 58.419 39.130 0.00 0.00 42.51 3.36
741 2871 4.209307 TGGCAACGATTATACACAAGGA 57.791 40.909 0.00 0.00 42.51 3.36
747 2882 8.300286 TCTTTTGAAAATGGCAACGATTATACA 58.700 29.630 0.00 0.00 42.51 2.29
754 2889 9.134734 GTTAATATCTTTTGAAAATGGCAACGA 57.865 29.630 0.00 0.00 42.51 3.85
755 2890 9.139174 AGTTAATATCTTTTGAAAATGGCAACG 57.861 29.630 0.00 0.00 42.51 4.10
767 2908 7.498443 ACCGAGGGAGTAGTTAATATCTTTTG 58.502 38.462 0.00 0.00 0.00 2.44
768 2909 7.672122 ACCGAGGGAGTAGTTAATATCTTTT 57.328 36.000 0.00 0.00 0.00 2.27
783 2924 6.628398 GCTCTTATATTATGGAACCGAGGGAG 60.628 46.154 0.00 0.00 0.00 4.30
785 2926 5.420409 GCTCTTATATTATGGAACCGAGGG 58.580 45.833 0.00 0.00 0.00 4.30
787 2928 5.710984 ACGCTCTTATATTATGGAACCGAG 58.289 41.667 0.00 0.00 0.00 4.63
789 2930 6.645415 AGAAACGCTCTTATATTATGGAACCG 59.355 38.462 0.00 0.00 0.00 4.44
790 2931 7.571428 GCAGAAACGCTCTTATATTATGGAACC 60.571 40.741 0.00 0.00 29.07 3.62
791 2932 7.291567 GCAGAAACGCTCTTATATTATGGAAC 58.708 38.462 0.00 0.00 29.07 3.62
792 2933 6.145534 CGCAGAAACGCTCTTATATTATGGAA 59.854 38.462 0.00 0.00 29.07 3.53
793 2934 5.633601 CGCAGAAACGCTCTTATATTATGGA 59.366 40.000 0.00 0.00 29.07 3.41
794 2935 5.405571 ACGCAGAAACGCTCTTATATTATGG 59.594 40.000 0.00 0.00 36.19 2.74
795 2936 6.453643 ACGCAGAAACGCTCTTATATTATG 57.546 37.500 0.00 0.00 36.19 1.90
796 2937 7.478520 AAACGCAGAAACGCTCTTATATTAT 57.521 32.000 0.00 0.00 36.19 1.28
797 2938 6.897259 AAACGCAGAAACGCTCTTATATTA 57.103 33.333 0.00 0.00 36.19 0.98
798 2939 5.796350 AAACGCAGAAACGCTCTTATATT 57.204 34.783 0.00 0.00 36.19 1.28
799 2940 5.796350 AAAACGCAGAAACGCTCTTATAT 57.204 34.783 0.00 0.00 36.19 0.86
800 2941 5.177881 TCAAAAACGCAGAAACGCTCTTATA 59.822 36.000 0.00 0.00 36.19 0.98
801 2942 4.024387 TCAAAAACGCAGAAACGCTCTTAT 60.024 37.500 0.00 0.00 36.19 1.73
802 2943 3.310227 TCAAAAACGCAGAAACGCTCTTA 59.690 39.130 0.00 0.00 36.19 2.10
803 2944 2.096819 TCAAAAACGCAGAAACGCTCTT 59.903 40.909 0.00 0.00 36.19 2.85
804 2945 1.668751 TCAAAAACGCAGAAACGCTCT 59.331 42.857 0.00 0.00 36.19 4.09
805 2946 1.773525 GTCAAAAACGCAGAAACGCTC 59.226 47.619 0.00 0.00 36.19 5.03
806 2947 1.131504 TGTCAAAAACGCAGAAACGCT 59.868 42.857 0.00 0.00 36.19 5.07
807 2948 1.251762 GTGTCAAAAACGCAGAAACGC 59.748 47.619 0.00 0.00 38.31 4.84
808 2949 1.507120 CGTGTCAAAAACGCAGAAACG 59.493 47.619 0.00 0.00 38.34 3.60
809 2950 2.275253 CACGTGTCAAAAACGCAGAAAC 59.725 45.455 7.58 0.00 44.80 2.78
810 2951 2.095668 ACACGTGTCAAAAACGCAGAAA 60.096 40.909 17.22 0.00 44.80 2.52
811 2952 1.465387 ACACGTGTCAAAAACGCAGAA 59.535 42.857 17.22 0.00 44.80 3.02
812 2953 1.061421 GACACGTGTCAAAAACGCAGA 59.939 47.619 37.16 0.00 44.80 4.26
813 2954 1.452717 GACACGTGTCAAAAACGCAG 58.547 50.000 37.16 1.27 44.80 5.18
814 2955 3.589639 GACACGTGTCAAAAACGCA 57.410 47.368 37.16 0.00 44.80 5.24
823 2964 1.061421 TCTGCGTTTTTGACACGTGTC 59.939 47.619 36.01 36.01 44.97 3.67
824 2965 1.080298 TCTGCGTTTTTGACACGTGT 58.920 45.000 23.64 23.64 39.92 4.49
825 2966 2.166741 TTCTGCGTTTTTGACACGTG 57.833 45.000 15.48 15.48 39.92 4.49
826 2967 2.095668 TGTTTCTGCGTTTTTGACACGT 60.096 40.909 0.00 0.00 39.92 4.49
827 2968 2.275253 GTGTTTCTGCGTTTTTGACACG 59.725 45.455 0.00 0.00 40.75 4.49
828 2969 3.498082 AGTGTTTCTGCGTTTTTGACAC 58.502 40.909 0.00 0.00 36.94 3.67
829 2970 3.438781 AGAGTGTTTCTGCGTTTTTGACA 59.561 39.130 0.00 0.00 33.93 3.58
830 2971 4.016113 AGAGTGTTTCTGCGTTTTTGAC 57.984 40.909 0.00 0.00 33.93 3.18
831 2972 4.695217 AAGAGTGTTTCTGCGTTTTTGA 57.305 36.364 0.00 0.00 35.91 2.69
832 2973 5.971202 ACATAAGAGTGTTTCTGCGTTTTTG 59.029 36.000 0.00 0.00 35.91 2.44
833 2974 6.131544 ACATAAGAGTGTTTCTGCGTTTTT 57.868 33.333 0.00 0.00 35.91 1.94
834 2975 5.751243 ACATAAGAGTGTTTCTGCGTTTT 57.249 34.783 0.00 0.00 35.91 2.43
835 2976 5.751243 AACATAAGAGTGTTTCTGCGTTT 57.249 34.783 0.00 0.00 39.15 3.60
836 2977 6.128282 CCATAACATAAGAGTGTTTCTGCGTT 60.128 38.462 0.00 0.00 42.08 4.84
837 2978 5.351465 CCATAACATAAGAGTGTTTCTGCGT 59.649 40.000 0.00 0.00 42.08 5.24
838 2979 5.220662 CCCATAACATAAGAGTGTTTCTGCG 60.221 44.000 0.00 0.00 42.08 5.18
839 2980 5.880332 TCCCATAACATAAGAGTGTTTCTGC 59.120 40.000 0.00 0.00 42.08 4.26
840 2981 6.036083 CGTCCCATAACATAAGAGTGTTTCTG 59.964 42.308 0.00 0.00 42.08 3.02
841 2982 6.106673 CGTCCCATAACATAAGAGTGTTTCT 58.893 40.000 0.00 0.00 42.08 2.52
842 2983 5.293569 CCGTCCCATAACATAAGAGTGTTTC 59.706 44.000 0.00 0.00 42.08 2.78
843 2984 5.046159 TCCGTCCCATAACATAAGAGTGTTT 60.046 40.000 0.00 0.00 42.08 2.83
844 2985 4.468510 TCCGTCCCATAACATAAGAGTGTT 59.531 41.667 0.00 0.00 44.09 3.32
845 2986 4.028131 TCCGTCCCATAACATAAGAGTGT 58.972 43.478 0.00 0.00 0.00 3.55
846 2987 4.501571 CCTCCGTCCCATAACATAAGAGTG 60.502 50.000 0.00 0.00 0.00 3.51
847 2988 3.641906 CCTCCGTCCCATAACATAAGAGT 59.358 47.826 0.00 0.00 0.00 3.24
848 2989 3.006967 CCCTCCGTCCCATAACATAAGAG 59.993 52.174 0.00 0.00 0.00 2.85
849 2990 2.969950 CCCTCCGTCCCATAACATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
850 2991 2.969950 TCCCTCCGTCCCATAACATAAG 59.030 50.000 0.00 0.00 0.00 1.73
851 2992 2.969950 CTCCCTCCGTCCCATAACATAA 59.030 50.000 0.00 0.00 0.00 1.90
852 2993 2.090943 ACTCCCTCCGTCCCATAACATA 60.091 50.000 0.00 0.00 0.00 2.29
853 2994 1.344087 ACTCCCTCCGTCCCATAACAT 60.344 52.381 0.00 0.00 0.00 2.71
854 2995 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
855 2996 2.077687 TACTCCCTCCGTCCCATAAC 57.922 55.000 0.00 0.00 0.00 1.89
856 2997 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
857 2998 3.400322 AGTATTACTCCCTCCGTCCCATA 59.600 47.826 0.00 0.00 0.00 2.74
858 2999 2.179424 AGTATTACTCCCTCCGTCCCAT 59.821 50.000 0.00 0.00 0.00 4.00
859 3000 1.572415 AGTATTACTCCCTCCGTCCCA 59.428 52.381 0.00 0.00 0.00 4.37
860 3001 2.364647 CAAGTATTACTCCCTCCGTCCC 59.635 54.545 0.00 0.00 0.00 4.46
861 3002 3.029570 ACAAGTATTACTCCCTCCGTCC 58.970 50.000 0.00 0.00 0.00 4.79
862 3003 4.081807 ACAACAAGTATTACTCCCTCCGTC 60.082 45.833 0.00 0.00 0.00 4.79
863 3004 3.836562 ACAACAAGTATTACTCCCTCCGT 59.163 43.478 0.00 0.00 0.00 4.69
864 3005 4.181578 CACAACAAGTATTACTCCCTCCG 58.818 47.826 0.00 0.00 0.00 4.63
865 3006 4.514401 CCACAACAAGTATTACTCCCTCC 58.486 47.826 0.00 0.00 0.00 4.30
866 3007 3.939592 GCCACAACAAGTATTACTCCCTC 59.060 47.826 0.00 0.00 0.00 4.30
867 3008 3.329520 TGCCACAACAAGTATTACTCCCT 59.670 43.478 0.00 0.00 0.00 4.20
868 3009 3.681593 TGCCACAACAAGTATTACTCCC 58.318 45.455 0.00 0.00 0.00 4.30
869 3010 4.438744 GCATGCCACAACAAGTATTACTCC 60.439 45.833 6.36 0.00 0.00 3.85
870 3011 4.396166 AGCATGCCACAACAAGTATTACTC 59.604 41.667 15.66 0.00 0.00 2.59
871 3012 4.335416 AGCATGCCACAACAAGTATTACT 58.665 39.130 15.66 0.00 0.00 2.24
872 3013 4.396166 AGAGCATGCCACAACAAGTATTAC 59.604 41.667 15.66 0.00 0.00 1.89
873 3014 4.588899 AGAGCATGCCACAACAAGTATTA 58.411 39.130 15.66 0.00 0.00 0.98
874 3015 3.424703 AGAGCATGCCACAACAAGTATT 58.575 40.909 15.66 0.00 0.00 1.89
875 3016 3.077484 AGAGCATGCCACAACAAGTAT 57.923 42.857 15.66 0.00 0.00 2.12
876 3017 2.566833 AGAGCATGCCACAACAAGTA 57.433 45.000 15.66 0.00 0.00 2.24
877 3018 1.696063 AAGAGCATGCCACAACAAGT 58.304 45.000 15.66 0.00 0.00 3.16
878 3019 2.400399 CAAAGAGCATGCCACAACAAG 58.600 47.619 15.66 0.00 0.00 3.16
879 3020 1.538634 GCAAAGAGCATGCCACAACAA 60.539 47.619 15.66 0.00 44.79 2.83
880 3021 0.032403 GCAAAGAGCATGCCACAACA 59.968 50.000 15.66 0.00 44.79 3.33
881 3022 1.005294 CGCAAAGAGCATGCCACAAC 61.005 55.000 15.66 1.16 46.13 3.32
957 3098 8.934023 TCCTTCAAAATCTACCAAGTGTAATT 57.066 30.769 0.00 0.00 0.00 1.40
959 3100 8.215050 TCTTCCTTCAAAATCTACCAAGTGTAA 58.785 33.333 0.00 0.00 0.00 2.41
1122 3574 2.413310 ACAGGAAAACGTGTGAAGGT 57.587 45.000 0.00 0.00 0.00 3.50
1123 3575 2.680841 TGAACAGGAAAACGTGTGAAGG 59.319 45.455 0.00 0.00 0.00 3.46
1131 3583 4.300189 TCAACCAATGAACAGGAAAACG 57.700 40.909 0.00 0.00 34.30 3.60
1143 3596 6.434965 TGATAGCCATCCAATATCAACCAATG 59.565 38.462 0.00 0.00 33.99 2.82
1155 3608 3.900971 TGCTGAATTGATAGCCATCCAA 58.099 40.909 0.00 0.00 39.15 3.53
1168 3621 2.173519 CCCCAGTCACAATGCTGAATT 58.826 47.619 0.00 0.00 34.87 2.17
1174 3627 0.603065 GGAAACCCCAGTCACAATGC 59.397 55.000 0.00 0.00 34.14 3.56
1237 3695 3.071874 TCCTGGCAGATTCGACAATTT 57.928 42.857 17.94 0.00 0.00 1.82
1279 3737 7.762159 AGTTTTATGTAAATTTTGGGCATACCG 59.238 33.333 0.00 0.00 44.64 4.02
1294 3752 8.736244 GGAGGTAAAATCTGCAGTTTTATGTAA 58.264 33.333 24.18 10.98 34.60 2.41
1361 3823 5.426689 AACAATTGAGATGTCTAGAGCCA 57.573 39.130 13.59 0.00 0.00 4.75
1362 3824 6.749923 AAAACAATTGAGATGTCTAGAGCC 57.250 37.500 13.59 0.00 0.00 4.70
1365 3827 9.950680 GAAACAAAAACAATTGAGATGTCTAGA 57.049 29.630 13.59 0.00 34.38 2.43
1459 3923 4.140447 ACCCCCAAGAGTATATGAGATGGA 60.140 45.833 0.00 0.00 0.00 3.41
1474 3948 6.423182 TGATTAGAATGACTAAACCCCCAAG 58.577 40.000 0.00 0.00 43.15 3.61
1475 3949 6.395780 TGATTAGAATGACTAAACCCCCAA 57.604 37.500 0.00 0.00 43.15 4.12
1476 3950 6.011981 AGTTGATTAGAATGACTAAACCCCCA 60.012 38.462 0.00 0.00 43.15 4.96
1477 3951 6.424032 AGTTGATTAGAATGACTAAACCCCC 58.576 40.000 0.00 0.00 43.15 5.40
1478 3952 7.715686 CCTAGTTGATTAGAATGACTAAACCCC 59.284 40.741 0.00 0.00 43.15 4.95
1479 3953 8.265764 ACCTAGTTGATTAGAATGACTAAACCC 58.734 37.037 0.00 0.00 43.15 4.11
1480 3954 9.315525 GACCTAGTTGATTAGAATGACTAAACC 57.684 37.037 0.00 0.00 43.15 3.27
1481 3955 9.871238 TGACCTAGTTGATTAGAATGACTAAAC 57.129 33.333 0.00 0.00 43.15 2.01
1513 4005 1.544825 TTGCTACCTCGGCTCTGCTT 61.545 55.000 0.00 0.00 0.00 3.91
1549 4041 4.947388 GTGATTAATGGCAACCAGGTAAGA 59.053 41.667 0.00 0.00 36.75 2.10
1555 4047 2.824936 TGGTGTGATTAATGGCAACCAG 59.175 45.455 0.00 0.00 36.75 4.00
1611 4104 4.557205 ACTCAGACTTGGACACGATAAAC 58.443 43.478 0.00 0.00 0.00 2.01
1615 4108 4.281182 AGTTAACTCAGACTTGGACACGAT 59.719 41.667 1.12 0.00 0.00 3.73
1616 4109 3.635373 AGTTAACTCAGACTTGGACACGA 59.365 43.478 1.12 0.00 0.00 4.35
1617 4110 3.736252 CAGTTAACTCAGACTTGGACACG 59.264 47.826 4.77 0.00 0.00 4.49
1618 4111 4.945246 TCAGTTAACTCAGACTTGGACAC 58.055 43.478 4.77 0.00 0.00 3.67
1619 4112 5.607939 TTCAGTTAACTCAGACTTGGACA 57.392 39.130 4.77 0.00 0.00 4.02
1620 4113 6.566753 GCAATTCAGTTAACTCAGACTTGGAC 60.567 42.308 19.11 7.47 0.00 4.02
1735 4228 4.134379 TGAAAACATGTGGCACAACAAT 57.866 36.364 25.95 10.10 44.16 2.71
1774 4275 6.260936 ACTGAACACTGTTTCCTTTACATGAG 59.739 38.462 0.00 0.00 0.00 2.90
1821 4323 9.832445 ATTAGTACAATACCAGAAACATGTAGG 57.168 33.333 0.00 1.69 0.00 3.18
1902 4413 8.421784 ACTCACTAGTCAAGAGTTATTTGTTGA 58.578 33.333 8.22 0.00 39.45 3.18
1965 4486 7.661437 TCGCTGTATCTGCAGGAAAATTAATAT 59.339 33.333 15.13 0.00 37.00 1.28
1971 4492 3.266510 TCGCTGTATCTGCAGGAAAAT 57.733 42.857 15.13 2.01 37.00 1.82
2025 4546 4.134563 CTCATGCACCATCATCATCTTCA 58.865 43.478 0.00 0.00 0.00 3.02
2141 4662 2.225068 ACGGTTCGATCAGCCATAAG 57.775 50.000 0.00 0.00 0.00 1.73
2247 4780 9.443365 TCTCATATATGATGGATCCATACACAT 57.557 33.333 27.38 25.10 36.70 3.21
2269 4802 4.223953 AGAGAACCAACCTTACAGTCTCA 58.776 43.478 0.00 0.00 0.00 3.27
2292 4825 6.806668 TCTCAACCATGATAACATACTGGA 57.193 37.500 0.00 0.00 34.37 3.86
2329 4865 9.371136 CAACATAGCATTCTTCTCTTGTACTAA 57.629 33.333 0.00 0.00 0.00 2.24
2330 4866 7.981789 CCAACATAGCATTCTTCTCTTGTACTA 59.018 37.037 0.00 0.00 0.00 1.82
2336 4872 4.946157 CCACCAACATAGCATTCTTCTCTT 59.054 41.667 0.00 0.00 0.00 2.85
2372 4918 5.452078 AAACATGAACATACCAACCACAG 57.548 39.130 0.00 0.00 0.00 3.66
2375 4921 6.266330 TGATGAAAACATGAACATACCAACCA 59.734 34.615 0.00 0.00 0.00 3.67
2473 5080 3.245803 ACACTCAGGACAGAGGGAATACT 60.246 47.826 0.72 0.00 41.67 2.12
2477 5084 2.110188 AGTACACTCAGGACAGAGGGAA 59.890 50.000 0.72 0.00 41.67 3.97
2478 5085 1.711375 AGTACACTCAGGACAGAGGGA 59.289 52.381 0.72 0.00 41.67 4.20
2479 5086 2.223803 AGTACACTCAGGACAGAGGG 57.776 55.000 0.00 0.00 44.68 4.30
2480 5087 3.574396 TGAAAGTACACTCAGGACAGAGG 59.426 47.826 0.00 0.00 39.97 3.69
2481 5088 4.855715 TGAAAGTACACTCAGGACAGAG 57.144 45.455 0.00 0.00 41.44 3.35
2482 5089 4.649674 AGTTGAAAGTACACTCAGGACAGA 59.350 41.667 0.00 0.00 0.00 3.41
2483 5090 4.950050 AGTTGAAAGTACACTCAGGACAG 58.050 43.478 0.00 0.00 0.00 3.51
2484 5091 5.353394 AAGTTGAAAGTACACTCAGGACA 57.647 39.130 0.00 0.00 0.00 4.02
2485 5092 5.585047 ACAAAGTTGAAAGTACACTCAGGAC 59.415 40.000 0.00 0.00 0.00 3.85
2486 5093 5.741011 ACAAAGTTGAAAGTACACTCAGGA 58.259 37.500 0.00 0.00 0.00 3.86
2487 5094 6.436843 AACAAAGTTGAAAGTACACTCAGG 57.563 37.500 0.00 0.00 0.00 3.86
2488 5095 7.526608 TCAAACAAAGTTGAAAGTACACTCAG 58.473 34.615 0.00 0.00 34.59 3.35
2489 5096 7.441890 TCAAACAAAGTTGAAAGTACACTCA 57.558 32.000 0.00 0.00 34.59 3.41
2547 5154 9.190317 TGGCATAAATGTTGGTGTATTATTGTA 57.810 29.630 0.00 0.00 0.00 2.41
2548 5155 8.072321 TGGCATAAATGTTGGTGTATTATTGT 57.928 30.769 0.00 0.00 0.00 2.71
2549 5156 9.195411 GATGGCATAAATGTTGGTGTATTATTG 57.805 33.333 0.00 0.00 0.00 1.90
2550 5157 8.922237 TGATGGCATAAATGTTGGTGTATTATT 58.078 29.630 0.00 0.00 0.00 1.40
2551 5158 8.476064 TGATGGCATAAATGTTGGTGTATTAT 57.524 30.769 0.00 0.00 0.00 1.28
2552 5159 7.888250 TGATGGCATAAATGTTGGTGTATTA 57.112 32.000 0.00 0.00 0.00 0.98
2553 5160 6.788598 TGATGGCATAAATGTTGGTGTATT 57.211 33.333 0.00 0.00 0.00 1.89
2554 5161 6.788598 TTGATGGCATAAATGTTGGTGTAT 57.211 33.333 0.00 0.00 0.00 2.29
2555 5162 6.596309 TTTGATGGCATAAATGTTGGTGTA 57.404 33.333 0.00 0.00 0.00 2.90
2556 5163 5.480642 TTTGATGGCATAAATGTTGGTGT 57.519 34.783 0.00 0.00 0.00 4.16
2557 5164 6.988622 AATTTGATGGCATAAATGTTGGTG 57.011 33.333 0.00 0.00 0.00 4.17
2558 5165 8.076910 TCTAATTTGATGGCATAAATGTTGGT 57.923 30.769 0.00 0.00 0.00 3.67
2559 5166 8.945481 TTCTAATTTGATGGCATAAATGTTGG 57.055 30.769 0.00 0.42 0.00 3.77
2560 5167 9.806203 TCTTCTAATTTGATGGCATAAATGTTG 57.194 29.630 0.00 2.80 0.00 3.33
2562 5169 9.976511 CATCTTCTAATTTGATGGCATAAATGT 57.023 29.630 0.00 0.00 35.32 2.71
2563 5170 8.922676 GCATCTTCTAATTTGATGGCATAAATG 58.077 33.333 0.00 0.00 38.30 2.32
2564 5171 8.867097 AGCATCTTCTAATTTGATGGCATAAAT 58.133 29.630 0.00 4.69 38.30 1.40
2565 5172 8.241497 AGCATCTTCTAATTTGATGGCATAAA 57.759 30.769 0.00 0.00 38.30 1.40
2566 5173 7.503230 TGAGCATCTTCTAATTTGATGGCATAA 59.497 33.333 0.00 0.00 38.30 1.90
2567 5174 6.999871 TGAGCATCTTCTAATTTGATGGCATA 59.000 34.615 0.00 0.00 38.30 3.14
2568 5175 5.831525 TGAGCATCTTCTAATTTGATGGCAT 59.168 36.000 0.00 0.00 38.30 4.40
2569 5176 5.195185 TGAGCATCTTCTAATTTGATGGCA 58.805 37.500 0.00 0.00 38.30 4.92
2570 5177 5.762825 TGAGCATCTTCTAATTTGATGGC 57.237 39.130 0.00 1.18 38.30 4.40
2571 5178 8.459635 CCATATGAGCATCTTCTAATTTGATGG 58.540 37.037 3.65 0.00 38.30 3.51
2572 5179 8.459635 CCCATATGAGCATCTTCTAATTTGATG 58.540 37.037 3.65 0.00 40.16 3.07
2573 5180 8.168725 ACCCATATGAGCATCTTCTAATTTGAT 58.831 33.333 3.65 0.00 34.92 2.57
2574 5181 7.520798 ACCCATATGAGCATCTTCTAATTTGA 58.479 34.615 3.65 0.00 34.92 2.69
2575 5182 7.756395 ACCCATATGAGCATCTTCTAATTTG 57.244 36.000 3.65 0.00 34.92 2.32
2576 5183 8.105829 CCTACCCATATGAGCATCTTCTAATTT 58.894 37.037 3.65 0.00 34.92 1.82
2577 5184 7.311549 CCCTACCCATATGAGCATCTTCTAATT 60.312 40.741 3.65 0.00 34.92 1.40
2578 5185 6.157645 CCCTACCCATATGAGCATCTTCTAAT 59.842 42.308 3.65 0.00 34.92 1.73
2579 5186 5.485353 CCCTACCCATATGAGCATCTTCTAA 59.515 44.000 3.65 0.00 34.92 2.10
2580 5187 5.026121 CCCTACCCATATGAGCATCTTCTA 58.974 45.833 3.65 0.00 34.92 2.10
2581 5188 3.843027 CCCTACCCATATGAGCATCTTCT 59.157 47.826 3.65 0.00 34.92 2.85
2582 5189 3.584848 ACCCTACCCATATGAGCATCTTC 59.415 47.826 3.65 0.00 34.92 2.87
2583 5190 3.328931 CACCCTACCCATATGAGCATCTT 59.671 47.826 3.65 0.00 34.92 2.40
2584 5191 2.909006 CACCCTACCCATATGAGCATCT 59.091 50.000 3.65 0.00 34.92 2.90
2585 5192 2.639839 ACACCCTACCCATATGAGCATC 59.360 50.000 3.65 0.00 0.00 3.91
2586 5193 2.373169 CACACCCTACCCATATGAGCAT 59.627 50.000 3.65 0.00 0.00 3.79
2587 5194 1.768275 CACACCCTACCCATATGAGCA 59.232 52.381 3.65 0.00 0.00 4.26
2588 5195 1.543429 GCACACCCTACCCATATGAGC 60.543 57.143 3.65 0.00 0.00 4.26
2589 5196 1.270305 CGCACACCCTACCCATATGAG 60.270 57.143 3.65 0.00 0.00 2.90
2590 5197 0.756294 CGCACACCCTACCCATATGA 59.244 55.000 3.65 0.00 0.00 2.15
2591 5198 0.756294 TCGCACACCCTACCCATATG 59.244 55.000 0.00 0.00 0.00 1.78
2592 5199 1.048601 CTCGCACACCCTACCCATAT 58.951 55.000 0.00 0.00 0.00 1.78
2593 5200 1.046472 CCTCGCACACCCTACCCATA 61.046 60.000 0.00 0.00 0.00 2.74
2594 5201 2.367202 CCTCGCACACCCTACCCAT 61.367 63.158 0.00 0.00 0.00 4.00
2595 5202 3.000819 CCTCGCACACCCTACCCA 61.001 66.667 0.00 0.00 0.00 4.51
2596 5203 3.782443 CCCTCGCACACCCTACCC 61.782 72.222 0.00 0.00 0.00 3.69
2597 5204 2.064581 ATCCCTCGCACACCCTACC 61.065 63.158 0.00 0.00 0.00 3.18
2598 5205 1.144057 CATCCCTCGCACACCCTAC 59.856 63.158 0.00 0.00 0.00 3.18
2599 5206 1.001120 TCATCCCTCGCACACCCTA 59.999 57.895 0.00 0.00 0.00 3.53
2600 5207 2.284625 TCATCCCTCGCACACCCT 60.285 61.111 0.00 0.00 0.00 4.34
2601 5208 2.187946 CTCATCCCTCGCACACCC 59.812 66.667 0.00 0.00 0.00 4.61
2602 5209 1.448540 CACTCATCCCTCGCACACC 60.449 63.158 0.00 0.00 0.00 4.16
2603 5210 1.016130 CACACTCATCCCTCGCACAC 61.016 60.000 0.00 0.00 0.00 3.82
2604 5211 1.293179 CACACTCATCCCTCGCACA 59.707 57.895 0.00 0.00 0.00 4.57
2605 5212 2.103042 GCACACTCATCCCTCGCAC 61.103 63.158 0.00 0.00 0.00 5.34
2606 5213 2.265739 GCACACTCATCCCTCGCA 59.734 61.111 0.00 0.00 0.00 5.10
2607 5214 2.887568 CGCACACTCATCCCTCGC 60.888 66.667 0.00 0.00 0.00 5.03
2608 5215 1.807165 CACGCACACTCATCCCTCG 60.807 63.158 0.00 0.00 0.00 4.63
2609 5216 0.530744 TACACGCACACTCATCCCTC 59.469 55.000 0.00 0.00 0.00 4.30
2610 5217 1.134699 CATACACGCACACTCATCCCT 60.135 52.381 0.00 0.00 0.00 4.20
2611 5218 1.290203 CATACACGCACACTCATCCC 58.710 55.000 0.00 0.00 0.00 3.85
2612 5219 2.010145 ACATACACGCACACTCATCC 57.990 50.000 0.00 0.00 0.00 3.51
2613 5220 4.359706 TCATACATACACGCACACTCATC 58.640 43.478 0.00 0.00 0.00 2.92
2614 5221 4.142160 ACTCATACATACACGCACACTCAT 60.142 41.667 0.00 0.00 0.00 2.90
2615 5222 3.192633 ACTCATACATACACGCACACTCA 59.807 43.478 0.00 0.00 0.00 3.41
2616 5223 3.770666 ACTCATACATACACGCACACTC 58.229 45.455 0.00 0.00 0.00 3.51
2617 5224 3.868757 ACTCATACATACACGCACACT 57.131 42.857 0.00 0.00 0.00 3.55
2618 5225 3.483574 GCAACTCATACATACACGCACAC 60.484 47.826 0.00 0.00 0.00 3.82
2619 5226 2.670905 GCAACTCATACATACACGCACA 59.329 45.455 0.00 0.00 0.00 4.57
2620 5227 2.930040 AGCAACTCATACATACACGCAC 59.070 45.455 0.00 0.00 0.00 5.34
2621 5228 3.245518 AGCAACTCATACATACACGCA 57.754 42.857 0.00 0.00 0.00 5.24
2622 5229 3.785505 GCAAGCAACTCATACATACACGC 60.786 47.826 0.00 0.00 0.00 5.34
2623 5230 3.370672 TGCAAGCAACTCATACATACACG 59.629 43.478 0.00 0.00 0.00 4.49
2624 5231 4.944962 TGCAAGCAACTCATACATACAC 57.055 40.909 0.00 0.00 0.00 2.90
2625 5232 6.072008 ACAAATGCAAGCAACTCATACATACA 60.072 34.615 0.00 0.00 0.00 2.29
2626 5233 6.324819 ACAAATGCAAGCAACTCATACATAC 58.675 36.000 0.00 0.00 0.00 2.39
2627 5234 6.513806 ACAAATGCAAGCAACTCATACATA 57.486 33.333 0.00 0.00 0.00 2.29
2628 5235 5.395682 ACAAATGCAAGCAACTCATACAT 57.604 34.783 0.00 0.00 0.00 2.29
2629 5236 4.852134 ACAAATGCAAGCAACTCATACA 57.148 36.364 0.00 0.00 0.00 2.29
2630 5237 5.942872 AGTACAAATGCAAGCAACTCATAC 58.057 37.500 0.00 0.00 0.00 2.39
2631 5238 7.336679 ACATAGTACAAATGCAAGCAACTCATA 59.663 33.333 0.00 0.00 0.00 2.15
2632 5239 6.151648 ACATAGTACAAATGCAAGCAACTCAT 59.848 34.615 0.00 0.00 0.00 2.90
2633 5240 5.473162 ACATAGTACAAATGCAAGCAACTCA 59.527 36.000 0.00 0.00 0.00 3.41
2634 5241 5.942872 ACATAGTACAAATGCAAGCAACTC 58.057 37.500 0.00 0.00 0.00 3.01
2635 5242 5.964958 ACATAGTACAAATGCAAGCAACT 57.035 34.783 0.00 0.02 0.00 3.16
2636 5243 6.148948 TGAACATAGTACAAATGCAAGCAAC 58.851 36.000 0.00 0.00 0.00 4.17
2637 5244 6.206438 TCTGAACATAGTACAAATGCAAGCAA 59.794 34.615 0.00 0.00 0.00 3.91
2638 5245 5.704978 TCTGAACATAGTACAAATGCAAGCA 59.295 36.000 0.00 0.00 0.00 3.91
2639 5246 6.182039 TCTGAACATAGTACAAATGCAAGC 57.818 37.500 7.85 0.00 0.00 4.01
2640 5247 9.462174 TTTTTCTGAACATAGTACAAATGCAAG 57.538 29.630 7.85 4.48 0.00 4.01
2747 5354 7.634522 CAAAGTTTGTCCAAGTTTGTGAAAAA 58.365 30.769 7.48 0.00 45.37 1.94
2748 5355 7.183580 CAAAGTTTGTCCAAGTTTGTGAAAA 57.816 32.000 7.48 0.00 45.37 2.29
2749 5356 6.777526 CAAAGTTTGTCCAAGTTTGTGAAA 57.222 33.333 7.48 0.00 45.37 2.69
2755 5362 7.881775 ACTATCTCAAAGTTTGTCCAAGTTT 57.118 32.000 15.08 1.83 38.38 2.66
2756 5363 7.881775 AACTATCTCAAAGTTTGTCCAAGTT 57.118 32.000 15.08 15.83 33.39 2.66
2757 5364 7.881775 AAACTATCTCAAAGTTTGTCCAAGT 57.118 32.000 15.08 11.59 43.66 3.16
2765 5372 6.004574 GGAGGGTCAAACTATCTCAAAGTTT 58.995 40.000 0.00 0.00 45.64 2.66
2766 5373 5.073144 TGGAGGGTCAAACTATCTCAAAGTT 59.927 40.000 0.00 0.00 38.82 2.66
2767 5374 4.597507 TGGAGGGTCAAACTATCTCAAAGT 59.402 41.667 0.00 0.00 0.00 2.66
2768 5375 5.165961 TGGAGGGTCAAACTATCTCAAAG 57.834 43.478 0.00 0.00 0.00 2.77
2769 5376 5.163141 TGTTGGAGGGTCAAACTATCTCAAA 60.163 40.000 0.00 0.00 0.00 2.69
2770 5377 4.349636 TGTTGGAGGGTCAAACTATCTCAA 59.650 41.667 0.00 0.00 0.00 3.02
2771 5378 3.907474 TGTTGGAGGGTCAAACTATCTCA 59.093 43.478 0.00 0.00 0.00 3.27
2772 5379 4.553330 TGTTGGAGGGTCAAACTATCTC 57.447 45.455 0.00 0.00 0.00 2.75
2773 5380 4.993705 TTGTTGGAGGGTCAAACTATCT 57.006 40.909 0.00 0.00 0.00 1.98
2774 5381 5.070685 ACTTTGTTGGAGGGTCAAACTATC 58.929 41.667 0.00 0.00 0.00 2.08
2775 5382 5.061721 ACTTTGTTGGAGGGTCAAACTAT 57.938 39.130 0.00 0.00 0.00 2.12
2776 5383 4.513406 ACTTTGTTGGAGGGTCAAACTA 57.487 40.909 0.00 0.00 0.00 2.24
2777 5384 3.382083 ACTTTGTTGGAGGGTCAAACT 57.618 42.857 0.00 0.00 0.00 2.66
2778 5385 4.457466 TCTACTTTGTTGGAGGGTCAAAC 58.543 43.478 0.00 0.00 0.00 2.93
2779 5386 4.781775 TCTACTTTGTTGGAGGGTCAAA 57.218 40.909 0.00 0.00 0.00 2.69
2780 5387 4.781775 TTCTACTTTGTTGGAGGGTCAA 57.218 40.909 0.00 0.00 0.00 3.18
2781 5388 4.165372 ACTTTCTACTTTGTTGGAGGGTCA 59.835 41.667 0.00 0.00 0.00 4.02
2782 5389 4.715713 ACTTTCTACTTTGTTGGAGGGTC 58.284 43.478 0.00 0.00 0.00 4.46
2783 5390 4.790718 ACTTTCTACTTTGTTGGAGGGT 57.209 40.909 0.00 0.00 0.00 4.34
2784 5391 5.469084 GTGTACTTTCTACTTTGTTGGAGGG 59.531 44.000 0.00 0.00 0.00 4.30
2785 5392 6.018180 GTGTGTACTTTCTACTTTGTTGGAGG 60.018 42.308 0.00 0.00 0.00 4.30
2786 5393 6.761714 AGTGTGTACTTTCTACTTTGTTGGAG 59.238 38.462 0.00 0.00 31.66 3.86
2787 5394 6.646267 AGTGTGTACTTTCTACTTTGTTGGA 58.354 36.000 0.00 0.00 31.66 3.53
2788 5395 6.920569 AGTGTGTACTTTCTACTTTGTTGG 57.079 37.500 0.00 0.00 31.66 3.77
2802 5409 4.262335 CCTCCGTCCTTTAAAGTGTGTACT 60.262 45.833 14.03 0.00 39.32 2.73
2803 5410 3.992427 CCTCCGTCCTTTAAAGTGTGTAC 59.008 47.826 14.03 3.81 0.00 2.90
2804 5411 3.007182 CCCTCCGTCCTTTAAAGTGTGTA 59.993 47.826 14.03 0.00 0.00 2.90
2805 5412 2.224450 CCCTCCGTCCTTTAAAGTGTGT 60.224 50.000 14.03 0.00 0.00 3.72
2806 5413 2.038033 TCCCTCCGTCCTTTAAAGTGTG 59.962 50.000 14.03 3.13 0.00 3.82
2807 5414 2.302157 CTCCCTCCGTCCTTTAAAGTGT 59.698 50.000 14.03 0.00 0.00 3.55
2808 5415 2.302157 ACTCCCTCCGTCCTTTAAAGTG 59.698 50.000 14.03 6.00 0.00 3.16
2809 5416 2.617658 ACTCCCTCCGTCCTTTAAAGT 58.382 47.619 14.03 0.00 0.00 2.66
2810 5417 3.430513 GCTACTCCCTCCGTCCTTTAAAG 60.431 52.174 8.32 8.32 0.00 1.85
2811 5418 2.498885 GCTACTCCCTCCGTCCTTTAAA 59.501 50.000 0.00 0.00 0.00 1.52
2812 5419 2.105766 GCTACTCCCTCCGTCCTTTAA 58.894 52.381 0.00 0.00 0.00 1.52
2813 5420 1.006281 TGCTACTCCCTCCGTCCTTTA 59.994 52.381 0.00 0.00 0.00 1.85
2814 5421 0.252103 TGCTACTCCCTCCGTCCTTT 60.252 55.000 0.00 0.00 0.00 3.11
2815 5422 0.252103 TTGCTACTCCCTCCGTCCTT 60.252 55.000 0.00 0.00 0.00 3.36
2816 5423 0.252103 TTTGCTACTCCCTCCGTCCT 60.252 55.000 0.00 0.00 0.00 3.85
2817 5424 0.611714 TTTTGCTACTCCCTCCGTCC 59.388 55.000 0.00 0.00 0.00 4.79
2818 5425 2.693267 ATTTTGCTACTCCCTCCGTC 57.307 50.000 0.00 0.00 0.00 4.79
2819 5426 3.081804 CAAATTTTGCTACTCCCTCCGT 58.918 45.455 0.00 0.00 0.00 4.69
2820 5427 3.127030 GTCAAATTTTGCTACTCCCTCCG 59.873 47.826 4.19 0.00 0.00 4.63
2821 5428 4.336280 AGTCAAATTTTGCTACTCCCTCC 58.664 43.478 4.19 0.00 0.00 4.30
2822 5429 7.631717 AATAGTCAAATTTTGCTACTCCCTC 57.368 36.000 4.19 0.00 0.00 4.30
2919 5527 2.681097 CGGATTTTCTGGAGGGGAACTC 60.681 54.545 0.00 0.00 45.84 3.01
2921 5529 1.004394 ACGGATTTTCTGGAGGGGAAC 59.996 52.381 0.00 0.00 0.00 3.62
2923 5531 1.368374 AACGGATTTTCTGGAGGGGA 58.632 50.000 0.00 0.00 0.00 4.81
2959 5595 8.918202 TTTCTTGTACTTGGTAGATTGACAAT 57.082 30.769 0.00 0.00 0.00 2.71
2960 5596 8.783093 CATTTCTTGTACTTGGTAGATTGACAA 58.217 33.333 0.00 0.00 0.00 3.18
2967 5603 5.932303 GTCTGCATTTCTTGTACTTGGTAGA 59.068 40.000 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.