Multiple sequence alignment - TraesCS7A01G108700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G108700 chr7A 100.000 2486 0 0 1 2486 66172971 66175456 0.000000e+00 4591.0
1 TraesCS7A01G108700 chr7A 98.137 161 3 0 1676 1836 636818506 636818666 5.230000e-72 281.0
2 TraesCS7A01G108700 chr7A 96.450 169 6 0 1668 1836 690190127 690190295 1.880000e-71 279.0
3 TraesCS7A01G108700 chr7B 90.291 927 60 19 576 1493 3721276 3722181 0.000000e+00 1186.0
4 TraesCS7A01G108700 chr7D 92.523 749 31 8 940 1674 63398352 63399089 0.000000e+00 1050.0
5 TraesCS7A01G108700 chr7D 90.533 169 11 2 1671 1836 480823111 480822945 4.160000e-53 219.0
6 TraesCS7A01G108700 chr7D 89.143 175 13 4 577 748 63398183 63398354 1.940000e-51 213.0
7 TraesCS7A01G108700 chr3D 91.013 612 43 9 1884 2486 575669842 575669234 0.000000e+00 815.0
8 TraesCS7A01G108700 chr3D 83.969 131 19 2 1018 1147 526069765 526069636 9.340000e-25 124.0
9 TraesCS7A01G108700 chr3D 85.915 71 4 5 5 71 567255708 567255776 1.230000e-08 71.3
10 TraesCS7A01G108700 chr1D 88.576 604 39 12 1887 2485 453042023 453041445 0.000000e+00 706.0
11 TraesCS7A01G108700 chr2B 90.411 511 42 6 1979 2486 772824471 772824977 0.000000e+00 665.0
12 TraesCS7A01G108700 chr2B 87.045 440 44 10 2053 2486 449128546 449128114 3.720000e-133 484.0
13 TraesCS7A01G108700 chr2B 95.652 46 2 0 265 310 28176988 28177033 9.540000e-10 75.0
14 TraesCS7A01G108700 chr4B 88.128 438 47 5 2053 2486 594624585 594625021 1.320000e-142 516.0
15 TraesCS7A01G108700 chr4B 84.424 443 62 7 2036 2476 78660733 78660296 1.770000e-116 429.0
16 TraesCS7A01G108700 chr1B 86.530 438 49 8 2053 2484 125714330 125713897 8.050000e-130 473.0
17 TraesCS7A01G108700 chr1B 85.327 443 59 6 2036 2476 443566049 443565611 1.050000e-123 453.0
18 TraesCS7A01G108700 chr2A 86.364 440 48 10 2053 2486 528753137 528752704 1.040000e-128 470.0
19 TraesCS7A01G108700 chr5A 94.706 170 8 1 1671 1840 520665010 520665178 1.900000e-66 263.0
20 TraesCS7A01G108700 chr5A 90.845 142 13 0 1008 1149 546576566 546576425 9.080000e-45 191.0
21 TraesCS7A01G108700 chr5A 91.111 135 11 1 1018 1151 546564492 546564358 5.460000e-42 182.0
22 TraesCS7A01G108700 chr5A 89.922 129 13 0 1018 1146 546658920 546658792 1.530000e-37 167.0
23 TraesCS7A01G108700 chr6B 90.588 170 11 2 1671 1837 56380851 56381018 1.160000e-53 220.0
24 TraesCS7A01G108700 chr6B 90.533 169 11 2 1671 1836 1900181 1900015 4.160000e-53 219.0
25 TraesCS7A01G108700 chr6B 90.533 169 11 2 1671 1836 1903604 1903438 4.160000e-53 219.0
26 TraesCS7A01G108700 chrUn 90.533 169 11 2 1671 1836 378125967 378126133 4.160000e-53 219.0
27 TraesCS7A01G108700 chrUn 90.533 169 11 2 1671 1836 378646227 378646061 4.160000e-53 219.0
28 TraesCS7A01G108700 chr5D 93.182 132 9 0 1018 1149 431402356 431402225 7.020000e-46 195.0
29 TraesCS7A01G108700 chr5D 90.345 145 12 2 1008 1151 483113190 483113333 3.260000e-44 189.0
30 TraesCS7A01G108700 chr5D 85.811 148 20 1 1018 1164 431252491 431252344 3.310000e-34 156.0
31 TraesCS7A01G108700 chr5D 88.618 123 14 0 1020 1142 431539670 431539548 1.540000e-32 150.0
32 TraesCS7A01G108700 chr5D 82.014 139 22 3 1010 1147 445209593 445209729 5.620000e-22 115.0
33 TraesCS7A01G108700 chr5B 89.630 135 13 1 1018 1151 520970819 520970685 1.180000e-38 171.0
34 TraesCS7A01G108700 chr3A 81.592 201 25 11 1670 1864 37458055 37457861 3.310000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G108700 chr7A 66172971 66175456 2485 False 4591.0 4591 100.000 1 2486 1 chr7A.!!$F1 2485
1 TraesCS7A01G108700 chr7B 3721276 3722181 905 False 1186.0 1186 90.291 576 1493 1 chr7B.!!$F1 917
2 TraesCS7A01G108700 chr7D 63398183 63399089 906 False 631.5 1050 90.833 577 1674 2 chr7D.!!$F1 1097
3 TraesCS7A01G108700 chr3D 575669234 575669842 608 True 815.0 815 91.013 1884 2486 1 chr3D.!!$R2 602
4 TraesCS7A01G108700 chr1D 453041445 453042023 578 True 706.0 706 88.576 1887 2485 1 chr1D.!!$R1 598
5 TraesCS7A01G108700 chr2B 772824471 772824977 506 False 665.0 665 90.411 1979 2486 1 chr2B.!!$F2 507
6 TraesCS7A01G108700 chr6B 1900015 1903604 3589 True 219.0 219 90.533 1671 1836 2 chr6B.!!$R1 165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
527 528 0.032813 AGGTTCCATGCCCAAGGATG 60.033 55.0 0.0 0.0 33.1 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1669 1697 0.178998 CCCCCTAGCTACGCTACTGA 60.179 60.0 0.0 0.0 40.44 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.994432 ATTTTAAAACATGCGAACATTTTTCAA 57.006 22.222 1.97 0.00 35.60 2.69
29 30 9.825972 TTTTAAAACATGCGAACATTTTTCAAA 57.174 22.222 0.00 0.00 35.60 2.69
30 31 9.994432 TTTAAAACATGCGAACATTTTTCAAAT 57.006 22.222 0.00 0.00 35.60 2.32
31 32 9.643652 TTAAAACATGCGAACATTTTTCAAATC 57.356 25.926 0.00 0.00 35.60 2.17
32 33 5.844301 ACATGCGAACATTTTTCAAATCC 57.156 34.783 0.00 0.00 32.87 3.01
33 34 4.690280 ACATGCGAACATTTTTCAAATCCC 59.310 37.500 0.00 0.00 32.87 3.85
34 35 4.327982 TGCGAACATTTTTCAAATCCCA 57.672 36.364 0.00 0.00 0.00 4.37
35 36 4.054671 TGCGAACATTTTTCAAATCCCAC 58.945 39.130 0.00 0.00 0.00 4.61
36 37 3.121113 GCGAACATTTTTCAAATCCCACG 59.879 43.478 0.00 0.00 0.00 4.94
37 38 4.541779 CGAACATTTTTCAAATCCCACGA 58.458 39.130 0.00 0.00 0.00 4.35
38 39 4.979197 CGAACATTTTTCAAATCCCACGAA 59.021 37.500 0.00 0.00 0.00 3.85
39 40 5.460419 CGAACATTTTTCAAATCCCACGAAA 59.540 36.000 0.00 0.00 0.00 3.46
40 41 6.145371 CGAACATTTTTCAAATCCCACGAAAT 59.855 34.615 0.00 0.00 0.00 2.17
41 42 7.307101 CGAACATTTTTCAAATCCCACGAAATT 60.307 33.333 0.00 0.00 0.00 1.82
42 43 7.188468 ACATTTTTCAAATCCCACGAAATTG 57.812 32.000 0.00 0.00 0.00 2.32
43 44 6.765512 ACATTTTTCAAATCCCACGAAATTGT 59.234 30.769 0.00 0.00 0.00 2.71
44 45 7.281999 ACATTTTTCAAATCCCACGAAATTGTT 59.718 29.630 0.00 0.00 28.80 2.83
45 46 7.617041 TTTTTCAAATCCCACGAAATTGTTT 57.383 28.000 0.00 0.00 0.00 2.83
46 47 7.617041 TTTTCAAATCCCACGAAATTGTTTT 57.383 28.000 0.00 0.00 0.00 2.43
47 48 6.595772 TTCAAATCCCACGAAATTGTTTTG 57.404 33.333 0.00 0.00 0.00 2.44
48 49 5.907207 TCAAATCCCACGAAATTGTTTTGA 58.093 33.333 0.00 0.00 31.50 2.69
49 50 6.341316 TCAAATCCCACGAAATTGTTTTGAA 58.659 32.000 0.00 0.00 31.15 2.69
50 51 6.989169 TCAAATCCCACGAAATTGTTTTGAAT 59.011 30.769 0.00 0.00 31.15 2.57
51 52 6.783892 AATCCCACGAAATTGTTTTGAATG 57.216 33.333 0.00 0.00 0.00 2.67
52 53 4.054671 TCCCACGAAATTGTTTTGAATGC 58.945 39.130 0.00 0.00 0.00 3.56
53 54 4.057432 CCCACGAAATTGTTTTGAATGCT 58.943 39.130 0.00 0.00 0.00 3.79
54 55 5.010112 TCCCACGAAATTGTTTTGAATGCTA 59.990 36.000 0.00 0.00 0.00 3.49
55 56 5.868801 CCCACGAAATTGTTTTGAATGCTAT 59.131 36.000 0.00 0.00 0.00 2.97
56 57 6.034898 CCCACGAAATTGTTTTGAATGCTATC 59.965 38.462 0.00 0.00 0.00 2.08
57 58 6.585702 CCACGAAATTGTTTTGAATGCTATCA 59.414 34.615 0.00 0.00 0.00 2.15
58 59 7.116090 CCACGAAATTGTTTTGAATGCTATCAA 59.884 33.333 0.00 1.30 37.53 2.57
59 60 7.946237 CACGAAATTGTTTTGAATGCTATCAAC 59.054 33.333 4.53 0.00 38.95 3.18
60 61 7.651304 ACGAAATTGTTTTGAATGCTATCAACA 59.349 29.630 4.53 0.00 38.95 3.33
61 62 8.649841 CGAAATTGTTTTGAATGCTATCAACAT 58.350 29.630 4.53 0.00 38.95 2.71
109 110 6.751514 TTTACACAGCTTTCACTTTTCTCA 57.248 33.333 0.00 0.00 0.00 3.27
110 111 6.751514 TTACACAGCTTTCACTTTTCTCAA 57.248 33.333 0.00 0.00 0.00 3.02
111 112 5.643379 ACACAGCTTTCACTTTTCTCAAA 57.357 34.783 0.00 0.00 0.00 2.69
112 113 6.212888 ACACAGCTTTCACTTTTCTCAAAT 57.787 33.333 0.00 0.00 0.00 2.32
113 114 6.633856 ACACAGCTTTCACTTTTCTCAAATT 58.366 32.000 0.00 0.00 0.00 1.82
114 115 6.753744 ACACAGCTTTCACTTTTCTCAAATTC 59.246 34.615 0.00 0.00 0.00 2.17
115 116 5.973565 ACAGCTTTCACTTTTCTCAAATTCG 59.026 36.000 0.00 0.00 0.00 3.34
116 117 5.973565 CAGCTTTCACTTTTCTCAAATTCGT 59.026 36.000 0.00 0.00 0.00 3.85
117 118 5.973565 AGCTTTCACTTTTCTCAAATTCGTG 59.026 36.000 0.00 0.00 0.00 4.35
118 119 5.743872 GCTTTCACTTTTCTCAAATTCGTGT 59.256 36.000 0.00 0.00 0.00 4.49
119 120 6.253512 GCTTTCACTTTTCTCAAATTCGTGTT 59.746 34.615 0.00 0.00 0.00 3.32
120 121 7.504922 TTTCACTTTTCTCAAATTCGTGTTG 57.495 32.000 0.00 0.00 0.00 3.33
121 122 6.189677 TCACTTTTCTCAAATTCGTGTTGT 57.810 33.333 0.00 0.00 0.00 3.32
122 123 6.616947 TCACTTTTCTCAAATTCGTGTTGTT 58.383 32.000 0.00 0.00 0.00 2.83
123 124 7.087639 TCACTTTTCTCAAATTCGTGTTGTTT 58.912 30.769 0.00 0.00 0.00 2.83
124 125 7.596995 TCACTTTTCTCAAATTCGTGTTGTTTT 59.403 29.630 0.00 0.00 0.00 2.43
125 126 8.855279 CACTTTTCTCAAATTCGTGTTGTTTTA 58.145 29.630 0.00 0.00 0.00 1.52
126 127 9.413048 ACTTTTCTCAAATTCGTGTTGTTTTAA 57.587 25.926 0.00 0.00 0.00 1.52
130 131 9.574458 TTCTCAAATTCGTGTTGTTTTAATTGA 57.426 25.926 0.00 0.00 0.00 2.57
131 132 9.743057 TCTCAAATTCGTGTTGTTTTAATTGAT 57.257 25.926 0.00 0.00 0.00 2.57
150 151 8.628882 AATTGATAAAGTAATTTTACGCCTGC 57.371 30.769 0.00 0.00 38.65 4.85
151 152 6.995511 TGATAAAGTAATTTTACGCCTGCT 57.004 33.333 0.00 0.00 38.65 4.24
152 153 7.011828 TGATAAAGTAATTTTACGCCTGCTC 57.988 36.000 0.00 0.00 38.65 4.26
153 154 4.696899 AAAGTAATTTTACGCCTGCTCC 57.303 40.909 0.00 0.00 38.65 4.70
154 155 2.640184 AGTAATTTTACGCCTGCTCCC 58.360 47.619 0.00 0.00 38.65 4.30
155 156 1.674441 GTAATTTTACGCCTGCTCCCC 59.326 52.381 0.00 0.00 0.00 4.81
156 157 0.331616 AATTTTACGCCTGCTCCCCT 59.668 50.000 0.00 0.00 0.00 4.79
157 158 0.331616 ATTTTACGCCTGCTCCCCTT 59.668 50.000 0.00 0.00 0.00 3.95
158 159 0.608035 TTTTACGCCTGCTCCCCTTG 60.608 55.000 0.00 0.00 0.00 3.61
159 160 1.774894 TTTACGCCTGCTCCCCTTGT 61.775 55.000 0.00 0.00 0.00 3.16
160 161 1.774894 TTACGCCTGCTCCCCTTGTT 61.775 55.000 0.00 0.00 0.00 2.83
161 162 1.774894 TACGCCTGCTCCCCTTGTTT 61.775 55.000 0.00 0.00 0.00 2.83
162 163 2.335712 CGCCTGCTCCCCTTGTTTC 61.336 63.158 0.00 0.00 0.00 2.78
163 164 2.335712 GCCTGCTCCCCTTGTTTCG 61.336 63.158 0.00 0.00 0.00 3.46
164 165 1.073199 CCTGCTCCCCTTGTTTCGT 59.927 57.895 0.00 0.00 0.00 3.85
165 166 0.955919 CCTGCTCCCCTTGTTTCGTC 60.956 60.000 0.00 0.00 0.00 4.20
166 167 0.955919 CTGCTCCCCTTGTTTCGTCC 60.956 60.000 0.00 0.00 0.00 4.79
167 168 1.375326 GCTCCCCTTGTTTCGTCCT 59.625 57.895 0.00 0.00 0.00 3.85
168 169 0.673956 GCTCCCCTTGTTTCGTCCTC 60.674 60.000 0.00 0.00 0.00 3.71
169 170 0.977395 CTCCCCTTGTTTCGTCCTCT 59.023 55.000 0.00 0.00 0.00 3.69
170 171 2.176889 CTCCCCTTGTTTCGTCCTCTA 58.823 52.381 0.00 0.00 0.00 2.43
171 172 2.766828 CTCCCCTTGTTTCGTCCTCTAT 59.233 50.000 0.00 0.00 0.00 1.98
172 173 3.178865 TCCCCTTGTTTCGTCCTCTATT 58.821 45.455 0.00 0.00 0.00 1.73
173 174 3.585732 TCCCCTTGTTTCGTCCTCTATTT 59.414 43.478 0.00 0.00 0.00 1.40
174 175 3.689649 CCCCTTGTTTCGTCCTCTATTTG 59.310 47.826 0.00 0.00 0.00 2.32
175 176 3.689649 CCCTTGTTTCGTCCTCTATTTGG 59.310 47.826 0.00 0.00 0.00 3.28
176 177 4.564821 CCCTTGTTTCGTCCTCTATTTGGA 60.565 45.833 0.00 0.00 0.00 3.53
192 193 2.638480 TGGACCTCCAACTCAAAGTG 57.362 50.000 0.00 0.00 44.35 3.16
193 194 2.123589 TGGACCTCCAACTCAAAGTGA 58.876 47.619 0.00 0.00 44.35 3.41
194 195 2.507886 TGGACCTCCAACTCAAAGTGAA 59.492 45.455 0.00 0.00 44.35 3.18
195 196 2.879026 GGACCTCCAACTCAAAGTGAAC 59.121 50.000 0.00 0.00 35.64 3.18
196 197 3.433740 GGACCTCCAACTCAAAGTGAACT 60.434 47.826 0.00 0.00 35.64 3.01
197 198 3.545703 ACCTCCAACTCAAAGTGAACTG 58.454 45.455 0.00 0.00 0.00 3.16
198 199 3.054361 ACCTCCAACTCAAAGTGAACTGT 60.054 43.478 0.00 0.00 0.00 3.55
199 200 3.947834 CCTCCAACTCAAAGTGAACTGTT 59.052 43.478 0.00 0.00 0.00 3.16
200 201 4.399303 CCTCCAACTCAAAGTGAACTGTTT 59.601 41.667 0.00 0.00 0.00 2.83
201 202 5.105756 CCTCCAACTCAAAGTGAACTGTTTT 60.106 40.000 0.00 0.00 0.00 2.43
202 203 6.339587 TCCAACTCAAAGTGAACTGTTTTT 57.660 33.333 0.00 0.00 0.00 1.94
203 204 6.386654 TCCAACTCAAAGTGAACTGTTTTTC 58.613 36.000 0.00 0.00 0.00 2.29
204 205 5.286082 CCAACTCAAAGTGAACTGTTTTTCG 59.714 40.000 0.00 0.00 0.00 3.46
205 206 5.622770 ACTCAAAGTGAACTGTTTTTCGT 57.377 34.783 0.00 0.00 0.00 3.85
206 207 6.009115 ACTCAAAGTGAACTGTTTTTCGTT 57.991 33.333 0.00 0.00 0.00 3.85
207 208 6.443792 ACTCAAAGTGAACTGTTTTTCGTTT 58.556 32.000 0.00 0.00 0.00 3.60
208 209 6.581166 ACTCAAAGTGAACTGTTTTTCGTTTC 59.419 34.615 0.00 0.00 0.00 2.78
209 210 6.439599 TCAAAGTGAACTGTTTTTCGTTTCA 58.560 32.000 0.00 0.00 0.00 2.69
210 211 6.580791 TCAAAGTGAACTGTTTTTCGTTTCAG 59.419 34.615 0.00 0.00 0.00 3.02
211 212 5.622770 AGTGAACTGTTTTTCGTTTCAGT 57.377 34.783 0.00 0.00 41.93 3.41
212 213 5.628134 AGTGAACTGTTTTTCGTTTCAGTC 58.372 37.500 0.00 0.00 39.72 3.51
213 214 5.180492 AGTGAACTGTTTTTCGTTTCAGTCA 59.820 36.000 0.00 0.00 39.72 3.41
214 215 5.283012 GTGAACTGTTTTTCGTTTCAGTCAC 59.717 40.000 0.00 0.00 39.72 3.67
215 216 5.180492 TGAACTGTTTTTCGTTTCAGTCACT 59.820 36.000 0.00 0.00 39.72 3.41
216 217 5.622770 ACTGTTTTTCGTTTCAGTCACTT 57.377 34.783 0.00 0.00 36.59 3.16
217 218 6.009115 ACTGTTTTTCGTTTCAGTCACTTT 57.991 33.333 0.00 0.00 36.59 2.66
218 219 6.443792 ACTGTTTTTCGTTTCAGTCACTTTT 58.556 32.000 0.00 0.00 36.59 2.27
219 220 6.921307 ACTGTTTTTCGTTTCAGTCACTTTTT 59.079 30.769 0.00 0.00 36.59 1.94
235 236 2.045561 TTTTTGCGAGGGTTCAGTCA 57.954 45.000 0.00 0.00 0.00 3.41
236 237 1.305201 TTTTGCGAGGGTTCAGTCAC 58.695 50.000 0.00 0.00 0.00 3.67
237 238 0.468226 TTTGCGAGGGTTCAGTCACT 59.532 50.000 0.00 0.00 0.00 3.41
238 239 0.468226 TTGCGAGGGTTCAGTCACTT 59.532 50.000 0.00 0.00 0.00 3.16
239 240 0.468226 TGCGAGGGTTCAGTCACTTT 59.532 50.000 0.00 0.00 0.00 2.66
240 241 1.134220 TGCGAGGGTTCAGTCACTTTT 60.134 47.619 0.00 0.00 0.00 2.27
241 242 1.947456 GCGAGGGTTCAGTCACTTTTT 59.053 47.619 0.00 0.00 0.00 1.94
242 243 2.031944 GCGAGGGTTCAGTCACTTTTTC 60.032 50.000 0.00 0.00 0.00 2.29
243 244 3.467803 CGAGGGTTCAGTCACTTTTTCT 58.532 45.455 0.00 0.00 0.00 2.52
244 245 3.877508 CGAGGGTTCAGTCACTTTTTCTT 59.122 43.478 0.00 0.00 0.00 2.52
245 246 4.335594 CGAGGGTTCAGTCACTTTTTCTTT 59.664 41.667 0.00 0.00 0.00 2.52
246 247 5.504173 CGAGGGTTCAGTCACTTTTTCTTTC 60.504 44.000 0.00 0.00 0.00 2.62
247 248 4.335594 AGGGTTCAGTCACTTTTTCTTTCG 59.664 41.667 0.00 0.00 0.00 3.46
248 249 4.334481 GGGTTCAGTCACTTTTTCTTTCGA 59.666 41.667 0.00 0.00 0.00 3.71
249 250 5.502606 GGTTCAGTCACTTTTTCTTTCGAG 58.497 41.667 0.00 0.00 0.00 4.04
250 251 4.795970 TCAGTCACTTTTTCTTTCGAGC 57.204 40.909 0.00 0.00 0.00 5.03
251 252 4.188462 TCAGTCACTTTTTCTTTCGAGCA 58.812 39.130 0.00 0.00 0.00 4.26
252 253 4.634004 TCAGTCACTTTTTCTTTCGAGCAA 59.366 37.500 0.00 0.00 0.00 3.91
253 254 5.296780 TCAGTCACTTTTTCTTTCGAGCAAT 59.703 36.000 0.00 0.00 0.00 3.56
254 255 5.973565 CAGTCACTTTTTCTTTCGAGCAATT 59.026 36.000 0.00 0.00 0.00 2.32
255 256 6.473455 CAGTCACTTTTTCTTTCGAGCAATTT 59.527 34.615 0.00 0.00 0.00 1.82
256 257 7.009540 CAGTCACTTTTTCTTTCGAGCAATTTT 59.990 33.333 0.00 0.00 0.00 1.82
257 258 8.188139 AGTCACTTTTTCTTTCGAGCAATTTTA 58.812 29.630 0.00 0.00 0.00 1.52
258 259 8.803799 GTCACTTTTTCTTTCGAGCAATTTTAA 58.196 29.630 0.00 0.00 0.00 1.52
259 260 8.803799 TCACTTTTTCTTTCGAGCAATTTTAAC 58.196 29.630 0.00 0.00 0.00 2.01
260 261 8.591312 CACTTTTTCTTTCGAGCAATTTTAACA 58.409 29.630 0.00 0.00 0.00 2.41
261 262 9.313118 ACTTTTTCTTTCGAGCAATTTTAACAT 57.687 25.926 0.00 0.00 0.00 2.71
262 263 9.571804 CTTTTTCTTTCGAGCAATTTTAACATG 57.428 29.630 0.00 0.00 0.00 3.21
263 264 7.636259 TTTCTTTCGAGCAATTTTAACATGG 57.364 32.000 0.00 0.00 0.00 3.66
264 265 6.325919 TCTTTCGAGCAATTTTAACATGGT 57.674 33.333 0.00 0.00 0.00 3.55
265 266 6.378582 TCTTTCGAGCAATTTTAACATGGTC 58.621 36.000 0.00 0.00 38.02 4.02
266 267 4.695217 TCGAGCAATTTTAACATGGTCC 57.305 40.909 0.00 0.00 38.10 4.46
267 268 3.442273 TCGAGCAATTTTAACATGGTCCC 59.558 43.478 0.00 0.00 38.10 4.46
268 269 3.192422 CGAGCAATTTTAACATGGTCCCA 59.808 43.478 0.00 0.00 38.10 4.37
269 270 4.494484 GAGCAATTTTAACATGGTCCCAC 58.506 43.478 0.00 0.00 35.99 4.61
270 271 4.159557 AGCAATTTTAACATGGTCCCACT 58.840 39.130 0.00 0.00 0.00 4.00
271 272 5.329399 AGCAATTTTAACATGGTCCCACTA 58.671 37.500 0.00 0.00 0.00 2.74
272 273 5.185056 AGCAATTTTAACATGGTCCCACTAC 59.815 40.000 0.00 0.00 0.00 2.73
273 274 5.185056 GCAATTTTAACATGGTCCCACTACT 59.815 40.000 0.00 0.00 0.00 2.57
274 275 6.295067 GCAATTTTAACATGGTCCCACTACTT 60.295 38.462 0.00 0.00 0.00 2.24
275 276 7.094118 GCAATTTTAACATGGTCCCACTACTTA 60.094 37.037 0.00 0.00 0.00 2.24
276 277 8.798402 CAATTTTAACATGGTCCCACTACTTAA 58.202 33.333 0.00 0.00 0.00 1.85
277 278 9.541884 AATTTTAACATGGTCCCACTACTTAAT 57.458 29.630 0.00 0.00 0.00 1.40
278 279 7.931578 TTTAACATGGTCCCACTACTTAATG 57.068 36.000 0.00 0.00 0.00 1.90
279 280 5.772393 AACATGGTCCCACTACTTAATGA 57.228 39.130 0.00 0.00 0.00 2.57
280 281 5.772393 ACATGGTCCCACTACTTAATGAA 57.228 39.130 0.00 0.00 0.00 2.57
281 282 6.134535 ACATGGTCCCACTACTTAATGAAA 57.865 37.500 0.00 0.00 0.00 2.69
282 283 6.731467 ACATGGTCCCACTACTTAATGAAAT 58.269 36.000 0.00 0.00 0.00 2.17
283 284 6.828785 ACATGGTCCCACTACTTAATGAAATC 59.171 38.462 0.00 0.00 0.00 2.17
284 285 6.381498 TGGTCCCACTACTTAATGAAATCA 57.619 37.500 0.00 0.00 0.00 2.57
285 286 6.785076 TGGTCCCACTACTTAATGAAATCAA 58.215 36.000 0.00 0.00 0.00 2.57
286 287 6.657541 TGGTCCCACTACTTAATGAAATCAAC 59.342 38.462 0.00 0.00 0.00 3.18
287 288 6.183360 GGTCCCACTACTTAATGAAATCAACG 60.183 42.308 0.00 0.00 0.00 4.10
288 289 5.878116 TCCCACTACTTAATGAAATCAACGG 59.122 40.000 0.00 0.00 0.00 4.44
289 290 5.448632 CCCACTACTTAATGAAATCAACGGC 60.449 44.000 0.00 0.00 0.00 5.68
290 291 5.354234 CCACTACTTAATGAAATCAACGGCT 59.646 40.000 0.00 0.00 0.00 5.52
291 292 6.456988 CCACTACTTAATGAAATCAACGGCTC 60.457 42.308 0.00 0.00 0.00 4.70
292 293 4.600012 ACTTAATGAAATCAACGGCTCG 57.400 40.909 0.00 0.00 0.00 5.03
293 294 3.374058 ACTTAATGAAATCAACGGCTCGG 59.626 43.478 0.00 0.00 0.00 4.63
294 295 2.107950 AATGAAATCAACGGCTCGGA 57.892 45.000 0.00 0.00 0.00 4.55
295 296 2.332063 ATGAAATCAACGGCTCGGAT 57.668 45.000 0.00 0.00 0.00 4.18
296 297 1.368641 TGAAATCAACGGCTCGGATG 58.631 50.000 0.00 0.00 0.00 3.51
297 298 1.338674 TGAAATCAACGGCTCGGATGT 60.339 47.619 0.00 0.00 0.00 3.06
298 299 2.093921 TGAAATCAACGGCTCGGATGTA 60.094 45.455 0.00 0.00 0.00 2.29
299 300 2.910688 AATCAACGGCTCGGATGTAT 57.089 45.000 0.00 0.00 0.00 2.29
300 301 2.910688 ATCAACGGCTCGGATGTATT 57.089 45.000 0.00 0.00 0.00 1.89
301 302 4.330944 AATCAACGGCTCGGATGTATTA 57.669 40.909 0.00 0.00 0.00 0.98
302 303 4.537135 ATCAACGGCTCGGATGTATTAT 57.463 40.909 0.00 0.00 0.00 1.28
303 304 5.654603 ATCAACGGCTCGGATGTATTATA 57.345 39.130 0.00 0.00 0.00 0.98
304 305 5.654603 TCAACGGCTCGGATGTATTATAT 57.345 39.130 0.00 0.00 0.00 0.86
305 306 6.762702 TCAACGGCTCGGATGTATTATATA 57.237 37.500 0.00 0.00 0.00 0.86
306 307 6.558009 TCAACGGCTCGGATGTATTATATAC 58.442 40.000 0.00 0.00 0.00 1.47
307 308 6.376299 TCAACGGCTCGGATGTATTATATACT 59.624 38.462 0.00 0.00 0.00 2.12
308 309 6.374565 ACGGCTCGGATGTATTATATACTC 57.625 41.667 0.00 0.00 0.00 2.59
309 310 6.120905 ACGGCTCGGATGTATTATATACTCT 58.879 40.000 0.00 0.00 0.00 3.24
310 311 6.260493 ACGGCTCGGATGTATTATATACTCTC 59.740 42.308 0.00 0.00 0.00 3.20
311 312 6.260271 CGGCTCGGATGTATTATATACTCTCA 59.740 42.308 0.00 0.00 0.00 3.27
312 313 7.419204 GGCTCGGATGTATTATATACTCTCAC 58.581 42.308 0.00 0.00 0.00 3.51
313 314 7.419204 GCTCGGATGTATTATATACTCTCACC 58.581 42.308 0.00 0.00 0.00 4.02
314 315 7.283580 GCTCGGATGTATTATATACTCTCACCT 59.716 40.741 0.00 0.00 0.00 4.00
315 316 8.734218 TCGGATGTATTATATACTCTCACCTC 57.266 38.462 0.00 0.00 0.00 3.85
316 317 8.549731 TCGGATGTATTATATACTCTCACCTCT 58.450 37.037 0.00 0.00 0.00 3.69
317 318 8.832521 CGGATGTATTATATACTCTCACCTCTC 58.167 40.741 0.00 0.00 0.00 3.20
318 319 9.688091 GGATGTATTATATACTCTCACCTCTCA 57.312 37.037 0.00 0.00 0.00 3.27
328 329 8.774546 ATACTCTCACCTCTCATATGAAAAGA 57.225 34.615 6.90 0.00 0.00 2.52
329 330 7.111247 ACTCTCACCTCTCATATGAAAAGAG 57.889 40.000 6.90 9.77 36.99 2.85
336 337 6.100404 CTCTCATATGAAAAGAGGAGGAGG 57.900 45.833 6.90 0.00 34.24 4.30
337 338 5.781827 TCTCATATGAAAAGAGGAGGAGGA 58.218 41.667 6.90 0.00 0.00 3.71
338 339 5.837979 TCTCATATGAAAAGAGGAGGAGGAG 59.162 44.000 6.90 0.00 0.00 3.69
339 340 5.781827 TCATATGAAAAGAGGAGGAGGAGA 58.218 41.667 1.98 0.00 0.00 3.71
340 341 6.388814 TCATATGAAAAGAGGAGGAGGAGAT 58.611 40.000 1.98 0.00 0.00 2.75
341 342 7.539292 TCATATGAAAAGAGGAGGAGGAGATA 58.461 38.462 1.98 0.00 0.00 1.98
342 343 7.673504 TCATATGAAAAGAGGAGGAGGAGATAG 59.326 40.741 1.98 0.00 0.00 2.08
343 344 4.551671 TGAAAAGAGGAGGAGGAGATAGG 58.448 47.826 0.00 0.00 0.00 2.57
344 345 4.233053 TGAAAAGAGGAGGAGGAGATAGGA 59.767 45.833 0.00 0.00 0.00 2.94
345 346 4.469469 AAAGAGGAGGAGGAGATAGGAG 57.531 50.000 0.00 0.00 0.00 3.69
346 347 2.358258 AGAGGAGGAGGAGATAGGAGG 58.642 57.143 0.00 0.00 0.00 4.30
347 348 1.357761 GAGGAGGAGGAGATAGGAGGG 59.642 61.905 0.00 0.00 0.00 4.30
348 349 1.059364 AGGAGGAGGAGATAGGAGGGA 60.059 57.143 0.00 0.00 0.00 4.20
349 350 2.007636 GGAGGAGGAGATAGGAGGGAT 58.992 57.143 0.00 0.00 0.00 3.85
350 351 2.024369 GGAGGAGGAGATAGGAGGGATC 60.024 59.091 0.00 0.00 0.00 3.36
351 352 2.652348 GAGGAGGAGATAGGAGGGATCA 59.348 54.545 0.00 0.00 0.00 2.92
352 353 3.272020 GAGGAGGAGATAGGAGGGATCAT 59.728 52.174 0.00 0.00 0.00 2.45
353 354 3.272020 AGGAGGAGATAGGAGGGATCATC 59.728 52.174 0.00 0.00 0.00 2.92
354 355 3.272020 GGAGGAGATAGGAGGGATCATCT 59.728 52.174 0.00 0.00 0.00 2.90
355 356 4.264804 GGAGGAGATAGGAGGGATCATCTT 60.265 50.000 0.00 0.00 0.00 2.40
356 357 4.686891 AGGAGATAGGAGGGATCATCTTG 58.313 47.826 0.00 0.00 0.00 3.02
357 358 4.359528 AGGAGATAGGAGGGATCATCTTGA 59.640 45.833 0.00 0.00 0.00 3.02
358 359 5.090139 GGAGATAGGAGGGATCATCTTGAA 58.910 45.833 0.00 0.00 0.00 2.69
359 360 5.046663 GGAGATAGGAGGGATCATCTTGAAC 60.047 48.000 0.00 0.00 0.00 3.18
360 361 4.843516 AGATAGGAGGGATCATCTTGAACC 59.156 45.833 0.00 0.00 38.46 3.62
365 366 2.725221 GGATCATCTTGAACCCAGCT 57.275 50.000 0.00 0.00 33.69 4.24
366 367 3.845781 GGATCATCTTGAACCCAGCTA 57.154 47.619 0.00 0.00 33.69 3.32
367 368 4.156455 GGATCATCTTGAACCCAGCTAA 57.844 45.455 0.00 0.00 33.69 3.09
368 369 3.879892 GGATCATCTTGAACCCAGCTAAC 59.120 47.826 0.00 0.00 33.69 2.34
369 370 3.350219 TCATCTTGAACCCAGCTAACC 57.650 47.619 0.00 0.00 0.00 2.85
370 371 2.642311 TCATCTTGAACCCAGCTAACCA 59.358 45.455 0.00 0.00 0.00 3.67
371 372 3.073798 TCATCTTGAACCCAGCTAACCAA 59.926 43.478 0.00 0.00 0.00 3.67
372 373 3.586470 TCTTGAACCCAGCTAACCAAA 57.414 42.857 0.00 0.00 0.00 3.28
373 374 3.486383 TCTTGAACCCAGCTAACCAAAG 58.514 45.455 0.00 0.00 0.00 2.77
374 375 3.117663 TCTTGAACCCAGCTAACCAAAGT 60.118 43.478 0.00 0.00 0.00 2.66
375 376 3.306472 TGAACCCAGCTAACCAAAGTT 57.694 42.857 0.00 0.00 40.15 2.66
376 377 4.440826 TGAACCCAGCTAACCAAAGTTA 57.559 40.909 0.00 0.00 37.42 2.24
377 378 4.139038 TGAACCCAGCTAACCAAAGTTAC 58.861 43.478 0.00 0.00 37.42 2.50
378 379 4.141344 TGAACCCAGCTAACCAAAGTTACT 60.141 41.667 0.00 0.00 37.42 2.24
379 380 4.017177 ACCCAGCTAACCAAAGTTACTC 57.983 45.455 0.00 0.00 37.42 2.59
380 381 3.393278 ACCCAGCTAACCAAAGTTACTCA 59.607 43.478 0.00 0.00 37.42 3.41
381 382 3.751698 CCCAGCTAACCAAAGTTACTCAC 59.248 47.826 0.00 0.00 37.42 3.51
382 383 3.751698 CCAGCTAACCAAAGTTACTCACC 59.248 47.826 0.00 0.00 37.42 4.02
383 384 3.751698 CAGCTAACCAAAGTTACTCACCC 59.248 47.826 0.00 0.00 37.42 4.61
384 385 3.393278 AGCTAACCAAAGTTACTCACCCA 59.607 43.478 0.00 0.00 37.42 4.51
385 386 4.139038 GCTAACCAAAGTTACTCACCCAA 58.861 43.478 0.00 0.00 37.42 4.12
386 387 4.581409 GCTAACCAAAGTTACTCACCCAAA 59.419 41.667 0.00 0.00 37.42 3.28
387 388 5.243060 GCTAACCAAAGTTACTCACCCAAAT 59.757 40.000 0.00 0.00 37.42 2.32
388 389 6.239204 GCTAACCAAAGTTACTCACCCAAATT 60.239 38.462 0.00 0.00 37.42 1.82
389 390 7.040271 GCTAACCAAAGTTACTCACCCAAATTA 60.040 37.037 0.00 0.00 37.42 1.40
390 391 6.894339 ACCAAAGTTACTCACCCAAATTAG 57.106 37.500 0.00 0.00 0.00 1.73
391 392 5.773176 ACCAAAGTTACTCACCCAAATTAGG 59.227 40.000 0.00 0.00 0.00 2.69
392 393 6.007703 CCAAAGTTACTCACCCAAATTAGGA 58.992 40.000 1.53 0.00 0.00 2.94
393 394 6.663523 CCAAAGTTACTCACCCAAATTAGGAT 59.336 38.462 1.53 0.00 0.00 3.24
394 395 7.178451 CCAAAGTTACTCACCCAAATTAGGATT 59.822 37.037 1.53 0.00 0.00 3.01
395 396 8.585018 CAAAGTTACTCACCCAAATTAGGATTT 58.415 33.333 1.53 0.00 35.90 2.17
396 397 7.939784 AGTTACTCACCCAAATTAGGATTTC 57.060 36.000 1.53 0.00 33.25 2.17
397 398 7.466804 AGTTACTCACCCAAATTAGGATTTCA 58.533 34.615 1.53 0.00 33.25 2.69
398 399 7.611855 AGTTACTCACCCAAATTAGGATTTCAG 59.388 37.037 1.53 0.00 33.25 3.02
399 400 5.264395 ACTCACCCAAATTAGGATTTCAGG 58.736 41.667 1.53 0.00 33.25 3.86
400 401 5.222337 ACTCACCCAAATTAGGATTTCAGGT 60.222 40.000 1.53 0.00 38.53 4.00
401 402 5.016173 TCACCCAAATTAGGATTTCAGGTG 58.984 41.667 16.88 16.88 46.35 4.00
402 403 5.269554 ACCCAAATTAGGATTTCAGGTGA 57.730 39.130 1.53 0.00 37.46 4.02
403 404 5.016831 ACCCAAATTAGGATTTCAGGTGAC 58.983 41.667 1.53 0.00 37.46 3.67
404 405 5.222337 ACCCAAATTAGGATTTCAGGTGACT 60.222 40.000 1.53 0.00 37.46 3.41
415 416 1.367840 AGGTGACTGACTGTTCGCC 59.632 57.895 2.98 2.98 41.13 5.54
416 417 1.668151 GGTGACTGACTGTTCGCCC 60.668 63.158 0.09 0.00 0.00 6.13
417 418 1.367840 GTGACTGACTGTTCGCCCT 59.632 57.895 0.00 0.00 0.00 5.19
418 419 0.249911 GTGACTGACTGTTCGCCCTT 60.250 55.000 0.00 0.00 0.00 3.95
419 420 0.033504 TGACTGACTGTTCGCCCTTC 59.966 55.000 0.00 0.00 0.00 3.46
420 421 0.670854 GACTGACTGTTCGCCCTTCC 60.671 60.000 0.00 0.00 0.00 3.46
421 422 1.738099 CTGACTGTTCGCCCTTCCG 60.738 63.158 0.00 0.00 0.00 4.30
422 423 2.154798 CTGACTGTTCGCCCTTCCGA 62.155 60.000 0.00 0.00 35.09 4.55
423 424 1.005394 GACTGTTCGCCCTTCCGAA 60.005 57.895 0.00 0.00 44.09 4.30
424 425 1.004918 ACTGTTCGCCCTTCCGAAG 60.005 57.895 0.68 0.68 46.51 3.79
425 426 1.292223 CTGTTCGCCCTTCCGAAGA 59.708 57.895 9.87 0.00 46.51 2.87
426 427 0.320421 CTGTTCGCCCTTCCGAAGAA 60.320 55.000 9.87 0.00 46.51 2.52
427 428 0.323629 TGTTCGCCCTTCCGAAGAAT 59.676 50.000 9.87 0.00 46.51 2.40
428 429 1.551430 TGTTCGCCCTTCCGAAGAATA 59.449 47.619 9.87 0.00 46.51 1.75
429 430 2.027929 TGTTCGCCCTTCCGAAGAATAA 60.028 45.455 9.87 0.00 46.51 1.40
430 431 2.304751 TCGCCCTTCCGAAGAATAAC 57.695 50.000 9.87 0.00 33.77 1.89
431 432 1.829222 TCGCCCTTCCGAAGAATAACT 59.171 47.619 9.87 0.00 33.77 2.24
432 433 3.025978 TCGCCCTTCCGAAGAATAACTA 58.974 45.455 9.87 0.00 33.77 2.24
433 434 3.121544 CGCCCTTCCGAAGAATAACTAC 58.878 50.000 9.87 0.00 0.00 2.73
434 435 3.464907 GCCCTTCCGAAGAATAACTACC 58.535 50.000 9.87 0.00 0.00 3.18
435 436 3.743584 GCCCTTCCGAAGAATAACTACCC 60.744 52.174 9.87 0.00 0.00 3.69
436 437 3.492137 CCCTTCCGAAGAATAACTACCCG 60.492 52.174 9.87 0.00 0.00 5.28
437 438 3.382546 CCTTCCGAAGAATAACTACCCGA 59.617 47.826 9.87 0.00 0.00 5.14
438 439 4.357996 CTTCCGAAGAATAACTACCCGAC 58.642 47.826 1.51 0.00 0.00 4.79
439 440 2.355756 TCCGAAGAATAACTACCCGACG 59.644 50.000 0.00 0.00 0.00 5.12
440 441 2.355756 CCGAAGAATAACTACCCGACGA 59.644 50.000 0.00 0.00 0.00 4.20
441 442 3.181497 CCGAAGAATAACTACCCGACGAA 60.181 47.826 0.00 0.00 0.00 3.85
442 443 4.414852 CGAAGAATAACTACCCGACGAAA 58.585 43.478 0.00 0.00 0.00 3.46
443 444 4.263911 CGAAGAATAACTACCCGACGAAAC 59.736 45.833 0.00 0.00 0.00 2.78
444 445 4.115401 AGAATAACTACCCGACGAAACC 57.885 45.455 0.00 0.00 0.00 3.27
445 446 3.511146 AGAATAACTACCCGACGAAACCA 59.489 43.478 0.00 0.00 0.00 3.67
446 447 2.723124 TAACTACCCGACGAAACCAC 57.277 50.000 0.00 0.00 0.00 4.16
447 448 1.043022 AACTACCCGACGAAACCACT 58.957 50.000 0.00 0.00 0.00 4.00
448 449 1.909700 ACTACCCGACGAAACCACTA 58.090 50.000 0.00 0.00 0.00 2.74
449 450 1.815003 ACTACCCGACGAAACCACTAG 59.185 52.381 0.00 0.00 0.00 2.57
450 451 0.527565 TACCCGACGAAACCACTAGC 59.472 55.000 0.00 0.00 0.00 3.42
451 452 1.804326 CCCGACGAAACCACTAGCG 60.804 63.158 0.00 0.00 0.00 4.26
452 453 1.210931 CCGACGAAACCACTAGCGA 59.789 57.895 0.00 0.00 0.00 4.93
453 454 0.179145 CCGACGAAACCACTAGCGAT 60.179 55.000 0.00 0.00 0.00 4.58
454 455 1.189403 CGACGAAACCACTAGCGATC 58.811 55.000 0.00 0.00 0.00 3.69
455 456 1.189403 GACGAAACCACTAGCGATCG 58.811 55.000 11.69 11.69 36.45 3.69
456 457 0.806868 ACGAAACCACTAGCGATCGA 59.193 50.000 21.57 0.00 34.62 3.59
457 458 1.189403 CGAAACCACTAGCGATCGAC 58.811 55.000 21.57 10.46 32.38 4.20
458 459 1.557651 GAAACCACTAGCGATCGACC 58.442 55.000 21.57 1.19 0.00 4.79
459 460 0.179145 AAACCACTAGCGATCGACCG 60.179 55.000 21.57 7.86 0.00 4.79
460 461 1.028330 AACCACTAGCGATCGACCGA 61.028 55.000 21.57 0.00 0.00 4.69
461 462 1.280142 CCACTAGCGATCGACCGAG 59.720 63.158 21.57 10.18 0.00 4.63
462 463 1.369448 CACTAGCGATCGACCGAGC 60.369 63.158 21.57 0.00 0.00 5.03
463 464 1.524165 ACTAGCGATCGACCGAGCT 60.524 57.895 21.57 7.20 43.07 4.09
464 465 1.205568 CTAGCGATCGACCGAGCTC 59.794 63.158 21.57 2.73 40.73 4.09
465 466 1.499688 CTAGCGATCGACCGAGCTCA 61.500 60.000 21.57 0.00 40.73 4.26
466 467 1.499688 TAGCGATCGACCGAGCTCAG 61.500 60.000 21.57 4.66 40.73 3.35
467 468 2.824901 GCGATCGACCGAGCTCAGA 61.825 63.158 21.57 7.55 0.00 3.27
468 469 1.945522 CGATCGACCGAGCTCAGAT 59.054 57.895 15.40 12.04 0.00 2.90
469 470 1.149148 CGATCGACCGAGCTCAGATA 58.851 55.000 15.40 0.00 0.00 1.98
470 471 1.127766 CGATCGACCGAGCTCAGATAG 59.872 57.143 15.40 8.94 0.00 2.08
471 472 2.147958 GATCGACCGAGCTCAGATAGT 58.852 52.381 15.40 2.23 0.00 2.12
472 473 1.300481 TCGACCGAGCTCAGATAGTG 58.700 55.000 15.40 0.00 0.00 2.74
473 474 0.309302 CGACCGAGCTCAGATAGTGG 59.691 60.000 15.40 7.28 0.00 4.00
474 475 0.671251 GACCGAGCTCAGATAGTGGG 59.329 60.000 15.40 6.50 0.00 4.61
478 479 2.280457 GCTCAGATAGTGGGCGCC 60.280 66.667 21.18 21.18 44.83 6.53
479 480 3.094062 GCTCAGATAGTGGGCGCCA 62.094 63.158 30.85 12.04 44.83 5.69
480 481 1.068753 CTCAGATAGTGGGCGCCAG 59.931 63.158 30.85 9.76 32.34 4.85
481 482 1.680522 CTCAGATAGTGGGCGCCAGT 61.681 60.000 30.85 18.99 40.67 4.00
482 483 1.227380 CAGATAGTGGGCGCCAGTC 60.227 63.158 30.85 17.36 38.30 3.51
483 484 1.685765 AGATAGTGGGCGCCAGTCA 60.686 57.895 30.85 15.00 38.30 3.41
484 485 1.521681 GATAGTGGGCGCCAGTCAC 60.522 63.158 30.85 25.90 38.30 3.67
485 486 3.371097 ATAGTGGGCGCCAGTCACG 62.371 63.158 30.85 0.00 38.30 4.35
487 488 4.367023 GTGGGCGCCAGTCACGTA 62.367 66.667 30.85 0.00 32.34 3.57
488 489 4.063967 TGGGCGCCAGTCACGTAG 62.064 66.667 30.85 0.00 0.00 3.51
490 491 2.703798 GGGCGCCAGTCACGTAGTA 61.704 63.158 30.85 0.00 41.61 1.82
491 492 1.515736 GGCGCCAGTCACGTAGTAC 60.516 63.158 24.80 0.00 41.61 2.73
492 493 1.505353 GCGCCAGTCACGTAGTACT 59.495 57.895 0.00 0.00 41.61 2.73
493 494 0.729116 GCGCCAGTCACGTAGTACTA 59.271 55.000 0.00 0.00 41.61 1.82
494 495 1.267932 GCGCCAGTCACGTAGTACTAG 60.268 57.143 1.87 0.53 41.61 2.57
495 496 2.005451 CGCCAGTCACGTAGTACTAGT 58.995 52.381 1.87 0.00 41.61 2.57
496 497 2.417933 CGCCAGTCACGTAGTACTAGTT 59.582 50.000 1.87 0.00 41.61 2.24
497 498 3.484886 CGCCAGTCACGTAGTACTAGTTC 60.485 52.174 1.87 0.00 41.61 3.01
498 499 3.484886 GCCAGTCACGTAGTACTAGTTCG 60.485 52.174 1.87 6.35 41.61 3.95
499 500 3.063180 CCAGTCACGTAGTACTAGTTCGG 59.937 52.174 13.86 5.43 41.61 4.30
500 501 3.063180 CAGTCACGTAGTACTAGTTCGGG 59.937 52.174 13.86 10.72 41.61 5.14
501 502 2.009774 TCACGTAGTACTAGTTCGGGC 58.990 52.381 13.86 0.00 41.61 6.13
502 503 1.009829 ACGTAGTACTAGTTCGGGCG 58.990 55.000 13.86 9.83 41.94 6.13
503 504 0.305922 CGTAGTACTAGTTCGGGCGG 59.694 60.000 1.87 0.00 0.00 6.13
504 505 0.665298 GTAGTACTAGTTCGGGCGGG 59.335 60.000 1.87 0.00 0.00 6.13
505 506 0.546122 TAGTACTAGTTCGGGCGGGA 59.454 55.000 0.00 0.00 0.00 5.14
506 507 1.034292 AGTACTAGTTCGGGCGGGAC 61.034 60.000 0.00 0.00 0.00 4.46
519 520 2.124695 GGGACGAGGTTCCATGCC 60.125 66.667 0.00 0.00 37.40 4.40
520 521 2.124695 GGACGAGGTTCCATGCCC 60.125 66.667 0.00 0.00 35.49 5.36
521 522 2.668632 GACGAGGTTCCATGCCCA 59.331 61.111 0.00 0.00 0.00 5.36
522 523 1.002624 GACGAGGTTCCATGCCCAA 60.003 57.895 0.00 0.00 0.00 4.12
523 524 1.002134 ACGAGGTTCCATGCCCAAG 60.002 57.895 0.00 0.00 0.00 3.61
524 525 1.750399 CGAGGTTCCATGCCCAAGG 60.750 63.158 0.00 0.00 0.00 3.61
525 526 1.691219 GAGGTTCCATGCCCAAGGA 59.309 57.895 0.00 0.00 0.00 3.36
526 527 0.259938 GAGGTTCCATGCCCAAGGAT 59.740 55.000 0.00 0.00 33.10 3.24
527 528 0.032813 AGGTTCCATGCCCAAGGATG 60.033 55.000 0.00 0.00 33.10 3.51
528 529 0.033208 GGTTCCATGCCCAAGGATGA 60.033 55.000 0.00 0.00 33.10 2.92
529 530 1.106285 GTTCCATGCCCAAGGATGAC 58.894 55.000 0.00 0.00 33.10 3.06
530 531 1.002069 TTCCATGCCCAAGGATGACT 58.998 50.000 0.00 0.00 33.10 3.41
531 532 0.548031 TCCATGCCCAAGGATGACTC 59.452 55.000 0.00 0.00 0.00 3.36
532 533 0.549950 CCATGCCCAAGGATGACTCT 59.450 55.000 0.00 0.00 0.00 3.24
533 534 1.676746 CATGCCCAAGGATGACTCTG 58.323 55.000 0.00 0.00 0.00 3.35
534 535 1.064906 CATGCCCAAGGATGACTCTGT 60.065 52.381 0.00 0.00 0.00 3.41
535 536 0.615331 TGCCCAAGGATGACTCTGTC 59.385 55.000 0.00 0.00 0.00 3.51
536 537 0.460987 GCCCAAGGATGACTCTGTCG 60.461 60.000 0.00 0.00 34.95 4.35
537 538 0.176680 CCCAAGGATGACTCTGTCGG 59.823 60.000 0.00 0.00 34.95 4.79
538 539 0.898320 CCAAGGATGACTCTGTCGGT 59.102 55.000 0.00 0.00 34.95 4.69
539 540 1.134965 CCAAGGATGACTCTGTCGGTC 60.135 57.143 0.00 0.00 34.95 4.79
540 541 0.811915 AAGGATGACTCTGTCGGTCG 59.188 55.000 0.00 0.00 36.58 4.79
541 542 1.032657 AGGATGACTCTGTCGGTCGG 61.033 60.000 0.00 0.00 36.58 4.79
542 543 1.226717 GATGACTCTGTCGGTCGGC 60.227 63.158 0.00 0.00 36.58 5.54
543 544 2.921538 GATGACTCTGTCGGTCGGCG 62.922 65.000 0.00 0.00 36.58 6.46
546 547 4.498520 CTCTGTCGGTCGGCGCAT 62.499 66.667 10.83 0.00 0.00 4.73
547 548 4.492160 TCTGTCGGTCGGCGCATC 62.492 66.667 10.83 0.00 0.00 3.91
615 616 2.038837 GCGGCCACTTTACTCCACC 61.039 63.158 2.24 0.00 0.00 4.61
616 617 1.740296 CGGCCACTTTACTCCACCG 60.740 63.158 2.24 0.00 0.00 4.94
617 618 1.373812 GGCCACTTTACTCCACCGT 59.626 57.895 0.00 0.00 0.00 4.83
618 619 0.672711 GGCCACTTTACTCCACCGTC 60.673 60.000 0.00 0.00 0.00 4.79
619 620 0.320697 GCCACTTTACTCCACCGTCT 59.679 55.000 0.00 0.00 0.00 4.18
620 621 1.270678 GCCACTTTACTCCACCGTCTT 60.271 52.381 0.00 0.00 0.00 3.01
621 622 2.413837 CCACTTTACTCCACCGTCTTG 58.586 52.381 0.00 0.00 0.00 3.02
622 623 2.413837 CACTTTACTCCACCGTCTTGG 58.586 52.381 0.00 0.00 46.41 3.61
623 624 1.346722 ACTTTACTCCACCGTCTTGGG 59.653 52.381 0.00 0.00 44.64 4.12
724 733 0.890996 CGCCAACCCAAAGAAGAGCT 60.891 55.000 0.00 0.00 0.00 4.09
748 757 2.045045 CGCCTCCCTTTGCATCCA 60.045 61.111 0.00 0.00 0.00 3.41
751 760 0.685458 GCCTCCCTTTGCATCCATGT 60.685 55.000 0.00 0.00 0.00 3.21
752 761 1.410083 GCCTCCCTTTGCATCCATGTA 60.410 52.381 0.00 0.00 0.00 2.29
755 764 1.280710 TCCCTTTGCATCCATGTACGT 59.719 47.619 0.00 0.00 0.00 3.57
759 768 2.658373 TTGCATCCATGTACGTACGT 57.342 45.000 25.98 25.98 0.00 3.57
844 853 4.733725 CCCGGGTTCCCTCCCTCA 62.734 72.222 14.18 0.00 44.95 3.86
845 854 2.366972 CCGGGTTCCCTCCCTCAT 60.367 66.667 6.31 0.00 44.95 2.90
897 906 2.896443 GAAGGGAGTGGAGCCGAG 59.104 66.667 0.00 0.00 0.00 4.63
898 907 3.378399 GAAGGGAGTGGAGCCGAGC 62.378 68.421 0.00 0.00 0.00 5.03
899 908 4.704103 AGGGAGTGGAGCCGAGCA 62.704 66.667 0.00 0.00 0.00 4.26
900 909 4.459089 GGGAGTGGAGCCGAGCAC 62.459 72.222 0.00 0.00 0.00 4.40
901 910 4.803426 GGAGTGGAGCCGAGCACG 62.803 72.222 0.00 0.00 39.43 5.34
927 936 2.809601 CACGTACGCCACTCCAGC 60.810 66.667 16.72 0.00 0.00 4.85
1372 1386 3.062466 TCCACGAGCCTGAGGACG 61.062 66.667 0.65 9.94 0.00 4.79
1488 1502 1.517257 CGCAGTGAACGCCTAGGAG 60.517 63.158 14.75 12.99 0.00 3.69
1497 1511 4.825679 GCCTAGGAGGGGCCAGGT 62.826 72.222 14.75 0.00 43.49 4.00
1509 1523 2.819595 CCAGGTCGAATGCCCGTG 60.820 66.667 0.00 0.00 0.00 4.94
1524 1538 1.358725 CCGTGTACCCAGCAATGACG 61.359 60.000 0.00 0.00 0.00 4.35
1556 1584 7.771826 GCGGCCTTTTAGATATATGGGTAATTA 59.228 37.037 0.00 0.00 0.00 1.40
1724 1752 0.477597 TGGACCACCCTGGAAATCCT 60.478 55.000 0.00 0.00 40.96 3.24
1817 5269 1.074889 ACCGAACCACCCTAGCAAATT 59.925 47.619 0.00 0.00 0.00 1.82
1842 5294 3.752796 GCTACGCCACTGGTATCAA 57.247 52.632 0.00 0.00 0.00 2.57
1843 5295 2.240493 GCTACGCCACTGGTATCAAT 57.760 50.000 0.00 0.00 0.00 2.57
1844 5296 1.867233 GCTACGCCACTGGTATCAATG 59.133 52.381 0.00 0.00 0.00 2.82
1845 5297 2.741878 GCTACGCCACTGGTATCAATGT 60.742 50.000 0.00 0.00 0.00 2.71
1846 5298 3.491964 GCTACGCCACTGGTATCAATGTA 60.492 47.826 0.00 0.00 0.00 2.29
1847 5299 2.901249 ACGCCACTGGTATCAATGTAC 58.099 47.619 0.00 0.00 0.00 2.90
1848 5300 2.500098 ACGCCACTGGTATCAATGTACT 59.500 45.455 0.00 0.00 0.00 2.73
1849 5301 3.123804 CGCCACTGGTATCAATGTACTC 58.876 50.000 0.00 0.00 0.00 2.59
1850 5302 3.467803 GCCACTGGTATCAATGTACTCC 58.532 50.000 0.00 0.00 0.00 3.85
1851 5303 3.134804 GCCACTGGTATCAATGTACTCCT 59.865 47.826 0.00 0.00 0.00 3.69
1852 5304 4.384208 GCCACTGGTATCAATGTACTCCTT 60.384 45.833 0.00 0.00 0.00 3.36
1853 5305 5.745227 CCACTGGTATCAATGTACTCCTTT 58.255 41.667 0.00 0.00 0.00 3.11
1854 5306 5.817816 CCACTGGTATCAATGTACTCCTTTC 59.182 44.000 0.00 0.00 0.00 2.62
1855 5307 5.520288 CACTGGTATCAATGTACTCCTTTCG 59.480 44.000 0.00 0.00 0.00 3.46
1856 5308 5.018539 TGGTATCAATGTACTCCTTTCGG 57.981 43.478 0.00 0.00 0.00 4.30
1857 5309 4.468510 TGGTATCAATGTACTCCTTTCGGT 59.531 41.667 0.00 0.00 0.00 4.69
1858 5310 5.046159 TGGTATCAATGTACTCCTTTCGGTT 60.046 40.000 0.00 0.00 0.00 4.44
1859 5311 5.878669 GGTATCAATGTACTCCTTTCGGTTT 59.121 40.000 0.00 0.00 0.00 3.27
1860 5312 6.373495 GGTATCAATGTACTCCTTTCGGTTTT 59.627 38.462 0.00 0.00 0.00 2.43
1861 5313 6.894339 ATCAATGTACTCCTTTCGGTTTTT 57.106 33.333 0.00 0.00 0.00 1.94
1897 5349 9.726438 ATATAAAGTTGAACTGTGCTAACTTCT 57.274 29.630 13.25 8.88 41.13 2.85
1912 5364 0.890683 CTTCTTGCCGGCAGGAATTT 59.109 50.000 42.62 0.00 40.40 1.82
2018 5474 4.508461 TTTCACTTTCTCATGCATGTGG 57.492 40.909 25.43 18.62 0.00 4.17
2092 5549 6.491062 AGACAGAATTGATGATGTCACCAAAA 59.509 34.615 6.91 0.00 43.55 2.44
2141 5598 2.228138 TTTGTAGCTCAAACCGTCGT 57.772 45.000 0.00 0.00 40.56 4.34
2163 5620 7.970121 GTCGTTTCGATTGAAAAACTGTTTTCG 60.970 37.037 17.94 16.14 45.07 3.46
2214 5671 7.704047 TCTTCGAAACTAGATCTCATGTTGATG 59.296 37.037 0.00 0.00 0.00 3.07
2263 5720 6.930667 AAAAAGTTACCACGTGTTCTACAT 57.069 33.333 15.65 0.00 0.00 2.29
2266 5723 8.436046 AAAAGTTACCACGTGTTCTACATAAA 57.564 30.769 15.65 0.00 0.00 1.40
2297 5754 4.261322 GCCTGTGGTGCATAAGTTATCATG 60.261 45.833 0.00 0.00 0.00 3.07
2322 5779 9.535170 TGTTGTTTACATAGAAATTATTGGGGA 57.465 29.630 0.00 0.00 0.00 4.81
2353 5812 4.342862 TTCTCCAACCTTCTCTTCACAG 57.657 45.455 0.00 0.00 0.00 3.66
2404 5866 7.745620 AAAAACGAATGTCATCCTAGTTCTT 57.254 32.000 0.00 0.00 0.00 2.52
2463 5926 4.998672 ACTGTTGGTCCGATCGAAAAATTA 59.001 37.500 18.66 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.994432 TTGAAAAATGTTCGCATGTTTTAAAAT 57.006 22.222 3.52 0.00 43.15 1.82
3 4 9.825972 TTTGAAAAATGTTCGCATGTTTTAAAA 57.174 22.222 9.32 0.00 43.15 1.52
4 5 9.994432 ATTTGAAAAATGTTCGCATGTTTTAAA 57.006 22.222 12.37 12.37 45.69 1.52
5 6 9.643652 GATTTGAAAAATGTTCGCATGTTTTAA 57.356 25.926 0.00 0.00 43.15 1.52
6 7 8.279103 GGATTTGAAAAATGTTCGCATGTTTTA 58.721 29.630 0.00 0.00 43.15 1.52
7 8 7.131565 GGATTTGAAAAATGTTCGCATGTTTT 58.868 30.769 0.00 0.00 43.15 2.43
8 9 6.293353 GGGATTTGAAAAATGTTCGCATGTTT 60.293 34.615 0.00 0.00 45.12 2.83
9 10 5.179182 GGGATTTGAAAAATGTTCGCATGTT 59.821 36.000 0.00 0.00 36.64 2.71
10 11 4.690280 GGGATTTGAAAAATGTTCGCATGT 59.310 37.500 0.00 0.00 37.97 3.21
11 12 4.689812 TGGGATTTGAAAAATGTTCGCATG 59.310 37.500 0.00 0.00 37.97 4.06
12 13 4.690280 GTGGGATTTGAAAAATGTTCGCAT 59.310 37.500 0.00 0.00 40.03 4.73
13 14 4.054671 GTGGGATTTGAAAAATGTTCGCA 58.945 39.130 0.00 0.00 0.00 5.10
14 15 3.121113 CGTGGGATTTGAAAAATGTTCGC 59.879 43.478 0.00 0.00 0.00 4.70
15 16 4.541779 TCGTGGGATTTGAAAAATGTTCG 58.458 39.130 0.00 0.00 0.00 3.95
16 17 6.836577 TTTCGTGGGATTTGAAAAATGTTC 57.163 33.333 0.00 0.00 0.00 3.18
17 18 7.281999 ACAATTTCGTGGGATTTGAAAAATGTT 59.718 29.630 0.00 0.00 34.71 2.71
18 19 6.765512 ACAATTTCGTGGGATTTGAAAAATGT 59.234 30.769 0.00 0.00 35.46 2.71
19 20 7.188468 ACAATTTCGTGGGATTTGAAAAATG 57.812 32.000 0.00 0.00 35.46 2.32
20 21 7.800155 AACAATTTCGTGGGATTTGAAAAAT 57.200 28.000 0.00 0.00 35.46 1.82
21 22 7.617041 AAACAATTTCGTGGGATTTGAAAAA 57.383 28.000 0.00 0.00 35.46 1.94
22 23 7.334421 TCAAAACAATTTCGTGGGATTTGAAAA 59.666 29.630 0.00 0.00 35.46 2.29
23 24 6.818644 TCAAAACAATTTCGTGGGATTTGAAA 59.181 30.769 0.00 0.00 33.91 2.69
24 25 6.341316 TCAAAACAATTTCGTGGGATTTGAA 58.659 32.000 0.00 0.00 33.91 2.69
25 26 5.907207 TCAAAACAATTTCGTGGGATTTGA 58.093 33.333 0.00 0.00 34.30 2.69
26 27 6.595772 TTCAAAACAATTTCGTGGGATTTG 57.404 33.333 0.00 0.00 0.00 2.32
27 28 6.293353 GCATTCAAAACAATTTCGTGGGATTT 60.293 34.615 0.00 0.00 0.00 2.17
28 29 5.179182 GCATTCAAAACAATTTCGTGGGATT 59.821 36.000 0.00 0.00 0.00 3.01
29 30 4.690280 GCATTCAAAACAATTTCGTGGGAT 59.310 37.500 0.00 0.00 0.00 3.85
30 31 4.054671 GCATTCAAAACAATTTCGTGGGA 58.945 39.130 0.00 0.00 0.00 4.37
31 32 4.057432 AGCATTCAAAACAATTTCGTGGG 58.943 39.130 0.00 0.00 0.00 4.61
32 33 6.585702 TGATAGCATTCAAAACAATTTCGTGG 59.414 34.615 0.00 0.00 0.00 4.94
33 34 7.565450 TGATAGCATTCAAAACAATTTCGTG 57.435 32.000 0.00 0.00 0.00 4.35
34 35 7.651304 TGTTGATAGCATTCAAAACAATTTCGT 59.349 29.630 3.24 0.00 37.36 3.85
35 36 8.005662 TGTTGATAGCATTCAAAACAATTTCG 57.994 30.769 3.24 0.00 37.36 3.46
84 85 7.598278 TGAGAAAAGTGAAAGCTGTGTAAAAA 58.402 30.769 0.00 0.00 0.00 1.94
85 86 7.151999 TGAGAAAAGTGAAAGCTGTGTAAAA 57.848 32.000 0.00 0.00 0.00 1.52
86 87 6.751514 TGAGAAAAGTGAAAGCTGTGTAAA 57.248 33.333 0.00 0.00 0.00 2.01
87 88 6.751514 TTGAGAAAAGTGAAAGCTGTGTAA 57.248 33.333 0.00 0.00 0.00 2.41
88 89 6.751514 TTTGAGAAAAGTGAAAGCTGTGTA 57.248 33.333 0.00 0.00 0.00 2.90
89 90 5.643379 TTTGAGAAAAGTGAAAGCTGTGT 57.357 34.783 0.00 0.00 0.00 3.72
90 91 6.075205 CGAATTTGAGAAAAGTGAAAGCTGTG 60.075 38.462 0.00 0.00 0.00 3.66
91 92 5.973565 CGAATTTGAGAAAAGTGAAAGCTGT 59.026 36.000 0.00 0.00 0.00 4.40
92 93 5.973565 ACGAATTTGAGAAAAGTGAAAGCTG 59.026 36.000 0.00 0.00 0.00 4.24
93 94 5.973565 CACGAATTTGAGAAAAGTGAAAGCT 59.026 36.000 0.00 0.00 30.92 3.74
94 95 5.743872 ACACGAATTTGAGAAAAGTGAAAGC 59.256 36.000 0.00 0.00 32.51 3.51
95 96 7.273381 ACAACACGAATTTGAGAAAAGTGAAAG 59.727 33.333 0.00 0.00 32.51 2.62
96 97 7.087639 ACAACACGAATTTGAGAAAAGTGAAA 58.912 30.769 0.00 0.00 32.51 2.69
97 98 6.616947 ACAACACGAATTTGAGAAAAGTGAA 58.383 32.000 0.00 0.00 32.51 3.18
98 99 6.189677 ACAACACGAATTTGAGAAAAGTGA 57.810 33.333 0.00 0.00 32.51 3.41
99 100 6.869421 AACAACACGAATTTGAGAAAAGTG 57.131 33.333 0.00 0.00 33.56 3.16
100 101 7.883229 AAAACAACACGAATTTGAGAAAAGT 57.117 28.000 0.00 0.00 0.00 2.66
104 105 9.574458 TCAATTAAAACAACACGAATTTGAGAA 57.426 25.926 0.00 0.00 0.00 2.87
105 106 9.743057 ATCAATTAAAACAACACGAATTTGAGA 57.257 25.926 0.00 0.00 0.00 3.27
124 125 9.724839 GCAGGCGTAAAATTACTTTATCAATTA 57.275 29.630 2.18 0.00 32.14 1.40
125 126 8.466798 AGCAGGCGTAAAATTACTTTATCAATT 58.533 29.630 2.18 0.00 32.14 2.32
126 127 7.996385 AGCAGGCGTAAAATTACTTTATCAAT 58.004 30.769 2.18 0.00 32.14 2.57
127 128 7.385778 AGCAGGCGTAAAATTACTTTATCAA 57.614 32.000 2.18 0.00 32.14 2.57
128 129 6.037830 GGAGCAGGCGTAAAATTACTTTATCA 59.962 38.462 2.18 0.00 32.14 2.15
129 130 6.427974 GGAGCAGGCGTAAAATTACTTTATC 58.572 40.000 2.18 0.00 32.14 1.75
130 131 5.298527 GGGAGCAGGCGTAAAATTACTTTAT 59.701 40.000 2.18 0.00 32.14 1.40
131 132 4.637091 GGGAGCAGGCGTAAAATTACTTTA 59.363 41.667 2.18 0.00 0.00 1.85
132 133 3.442625 GGGAGCAGGCGTAAAATTACTTT 59.557 43.478 2.18 0.00 0.00 2.66
133 134 3.014623 GGGAGCAGGCGTAAAATTACTT 58.985 45.455 2.18 0.00 0.00 2.24
134 135 2.640184 GGGAGCAGGCGTAAAATTACT 58.360 47.619 2.18 0.00 0.00 2.24
135 136 1.674441 GGGGAGCAGGCGTAAAATTAC 59.326 52.381 0.00 0.00 0.00 1.89
136 137 1.562475 AGGGGAGCAGGCGTAAAATTA 59.438 47.619 0.00 0.00 0.00 1.40
137 138 0.331616 AGGGGAGCAGGCGTAAAATT 59.668 50.000 0.00 0.00 0.00 1.82
138 139 0.331616 AAGGGGAGCAGGCGTAAAAT 59.668 50.000 0.00 0.00 0.00 1.82
139 140 0.608035 CAAGGGGAGCAGGCGTAAAA 60.608 55.000 0.00 0.00 0.00 1.52
140 141 1.002624 CAAGGGGAGCAGGCGTAAA 60.003 57.895 0.00 0.00 0.00 2.01
141 142 1.774894 AACAAGGGGAGCAGGCGTAA 61.775 55.000 0.00 0.00 0.00 3.18
142 143 1.774894 AAACAAGGGGAGCAGGCGTA 61.775 55.000 0.00 0.00 0.00 4.42
143 144 3.133365 AAACAAGGGGAGCAGGCGT 62.133 57.895 0.00 0.00 0.00 5.68
144 145 2.282462 AAACAAGGGGAGCAGGCG 60.282 61.111 0.00 0.00 0.00 5.52
145 146 2.335712 CGAAACAAGGGGAGCAGGC 61.336 63.158 0.00 0.00 0.00 4.85
146 147 0.955919 GACGAAACAAGGGGAGCAGG 60.956 60.000 0.00 0.00 0.00 4.85
147 148 0.955919 GGACGAAACAAGGGGAGCAG 60.956 60.000 0.00 0.00 0.00 4.24
148 149 1.072505 GGACGAAACAAGGGGAGCA 59.927 57.895 0.00 0.00 0.00 4.26
149 150 0.673956 GAGGACGAAACAAGGGGAGC 60.674 60.000 0.00 0.00 0.00 4.70
150 151 0.977395 AGAGGACGAAACAAGGGGAG 59.023 55.000 0.00 0.00 0.00 4.30
151 152 2.314071 TAGAGGACGAAACAAGGGGA 57.686 50.000 0.00 0.00 0.00 4.81
152 153 3.629142 AATAGAGGACGAAACAAGGGG 57.371 47.619 0.00 0.00 0.00 4.79
153 154 3.689649 CCAAATAGAGGACGAAACAAGGG 59.310 47.826 0.00 0.00 0.00 3.95
154 155 4.392138 GTCCAAATAGAGGACGAAACAAGG 59.608 45.833 0.00 0.00 45.35 3.61
155 156 5.532025 GTCCAAATAGAGGACGAAACAAG 57.468 43.478 0.00 0.00 45.35 3.16
173 174 2.123589 TCACTTTGAGTTGGAGGTCCA 58.876 47.619 0.00 0.00 45.94 4.02
174 175 2.879026 GTTCACTTTGAGTTGGAGGTCC 59.121 50.000 0.00 0.00 0.00 4.46
175 176 3.561725 CAGTTCACTTTGAGTTGGAGGTC 59.438 47.826 0.00 0.00 0.00 3.85
176 177 3.054361 ACAGTTCACTTTGAGTTGGAGGT 60.054 43.478 0.00 0.00 0.00 3.85
177 178 3.545703 ACAGTTCACTTTGAGTTGGAGG 58.454 45.455 0.00 0.00 0.00 4.30
178 179 5.567138 AAACAGTTCACTTTGAGTTGGAG 57.433 39.130 0.00 0.00 0.00 3.86
179 180 5.975693 AAAACAGTTCACTTTGAGTTGGA 57.024 34.783 0.00 0.00 0.00 3.53
180 181 5.286082 CGAAAAACAGTTCACTTTGAGTTGG 59.714 40.000 0.00 0.00 0.00 3.77
181 182 5.856455 ACGAAAAACAGTTCACTTTGAGTTG 59.144 36.000 0.00 0.00 0.00 3.16
182 183 6.009115 ACGAAAAACAGTTCACTTTGAGTT 57.991 33.333 0.00 0.00 0.00 3.01
183 184 5.622770 ACGAAAAACAGTTCACTTTGAGT 57.377 34.783 0.00 0.00 0.00 3.41
184 185 6.580791 TGAAACGAAAAACAGTTCACTTTGAG 59.419 34.615 0.00 0.00 0.00 3.02
185 186 6.439599 TGAAACGAAAAACAGTTCACTTTGA 58.560 32.000 0.00 0.00 0.00 2.69
186 187 6.362283 ACTGAAACGAAAAACAGTTCACTTTG 59.638 34.615 0.00 0.00 40.03 2.77
187 188 6.443792 ACTGAAACGAAAAACAGTTCACTTT 58.556 32.000 0.00 0.00 40.03 2.66
188 189 6.009115 ACTGAAACGAAAAACAGTTCACTT 57.991 33.333 0.00 0.00 40.03 3.16
189 190 5.180492 TGACTGAAACGAAAAACAGTTCACT 59.820 36.000 0.00 0.00 42.45 3.41
190 191 5.283012 GTGACTGAAACGAAAAACAGTTCAC 59.717 40.000 0.00 0.00 42.45 3.18
191 192 5.180492 AGTGACTGAAACGAAAAACAGTTCA 59.820 36.000 0.00 0.00 42.45 3.18
192 193 5.628134 AGTGACTGAAACGAAAAACAGTTC 58.372 37.500 0.00 0.00 42.45 3.01
193 194 5.622770 AGTGACTGAAACGAAAAACAGTT 57.377 34.783 0.00 0.00 42.45 3.16
194 195 5.622770 AAGTGACTGAAACGAAAAACAGT 57.377 34.783 0.00 0.00 44.56 3.55
195 196 6.927933 AAAAGTGACTGAAACGAAAAACAG 57.072 33.333 0.00 0.00 36.58 3.16
216 217 1.673920 GTGACTGAACCCTCGCAAAAA 59.326 47.619 0.00 0.00 0.00 1.94
217 218 1.134220 AGTGACTGAACCCTCGCAAAA 60.134 47.619 0.00 0.00 0.00 2.44
218 219 0.468226 AGTGACTGAACCCTCGCAAA 59.532 50.000 0.00 0.00 0.00 3.68
219 220 0.468226 AAGTGACTGAACCCTCGCAA 59.532 50.000 0.00 0.00 0.00 4.85
220 221 0.468226 AAAGTGACTGAACCCTCGCA 59.532 50.000 0.00 0.00 0.00 5.10
221 222 1.594331 AAAAGTGACTGAACCCTCGC 58.406 50.000 0.00 0.00 0.00 5.03
222 223 3.467803 AGAAAAAGTGACTGAACCCTCG 58.532 45.455 0.00 0.00 0.00 4.63
223 224 5.504173 CGAAAGAAAAAGTGACTGAACCCTC 60.504 44.000 0.00 0.00 0.00 4.30
224 225 4.335594 CGAAAGAAAAAGTGACTGAACCCT 59.664 41.667 0.00 0.00 0.00 4.34
225 226 4.334481 TCGAAAGAAAAAGTGACTGAACCC 59.666 41.667 0.00 0.00 37.03 4.11
226 227 5.479716 TCGAAAGAAAAAGTGACTGAACC 57.520 39.130 0.00 0.00 37.03 3.62
227 228 4.964555 GCTCGAAAGAAAAAGTGACTGAAC 59.035 41.667 0.00 0.00 41.32 3.18
228 229 4.634004 TGCTCGAAAGAAAAAGTGACTGAA 59.366 37.500 0.00 0.00 41.32 3.02
229 230 4.188462 TGCTCGAAAGAAAAAGTGACTGA 58.812 39.130 0.00 0.00 41.32 3.41
230 231 4.536364 TGCTCGAAAGAAAAAGTGACTG 57.464 40.909 0.00 0.00 41.32 3.51
231 232 5.757850 ATTGCTCGAAAGAAAAAGTGACT 57.242 34.783 0.00 0.00 41.32 3.41
232 233 6.812481 AAATTGCTCGAAAGAAAAAGTGAC 57.188 33.333 0.00 0.00 41.32 3.67
233 234 8.803799 GTTAAAATTGCTCGAAAGAAAAAGTGA 58.196 29.630 0.00 0.00 41.32 3.41
234 235 8.591312 TGTTAAAATTGCTCGAAAGAAAAAGTG 58.409 29.630 0.00 0.00 41.32 3.16
235 236 8.696410 TGTTAAAATTGCTCGAAAGAAAAAGT 57.304 26.923 0.00 0.00 41.32 2.66
236 237 9.571804 CATGTTAAAATTGCTCGAAAGAAAAAG 57.428 29.630 0.00 0.00 41.32 2.27
237 238 8.547069 CCATGTTAAAATTGCTCGAAAGAAAAA 58.453 29.630 0.00 0.00 41.32 1.94
238 239 7.708752 ACCATGTTAAAATTGCTCGAAAGAAAA 59.291 29.630 0.00 0.00 41.32 2.29
239 240 7.206687 ACCATGTTAAAATTGCTCGAAAGAAA 58.793 30.769 0.00 0.00 41.32 2.52
240 241 6.744112 ACCATGTTAAAATTGCTCGAAAGAA 58.256 32.000 0.00 0.00 41.32 2.52
241 242 6.325919 ACCATGTTAAAATTGCTCGAAAGA 57.674 33.333 0.00 0.00 39.12 2.52
242 243 5.572896 GGACCATGTTAAAATTGCTCGAAAG 59.427 40.000 0.00 0.00 0.00 2.62
243 244 5.465935 GGACCATGTTAAAATTGCTCGAAA 58.534 37.500 0.00 0.00 0.00 3.46
244 245 4.082463 GGGACCATGTTAAAATTGCTCGAA 60.082 41.667 0.00 0.00 0.00 3.71
245 246 3.442273 GGGACCATGTTAAAATTGCTCGA 59.558 43.478 0.00 0.00 0.00 4.04
246 247 3.192422 TGGGACCATGTTAAAATTGCTCG 59.808 43.478 0.00 0.00 0.00 5.03
247 248 4.220602 AGTGGGACCATGTTAAAATTGCTC 59.779 41.667 0.00 0.00 0.00 4.26
248 249 4.159557 AGTGGGACCATGTTAAAATTGCT 58.840 39.130 0.00 0.00 0.00 3.91
249 250 4.535526 AGTGGGACCATGTTAAAATTGC 57.464 40.909 0.00 0.00 0.00 3.56
250 251 6.834168 AGTAGTGGGACCATGTTAAAATTG 57.166 37.500 0.00 0.00 0.00 2.32
251 252 8.943594 TTAAGTAGTGGGACCATGTTAAAATT 57.056 30.769 0.00 0.00 0.00 1.82
252 253 8.966868 CATTAAGTAGTGGGACCATGTTAAAAT 58.033 33.333 0.00 0.00 0.00 1.82
253 254 8.164733 TCATTAAGTAGTGGGACCATGTTAAAA 58.835 33.333 0.00 0.00 0.00 1.52
254 255 7.691213 TCATTAAGTAGTGGGACCATGTTAAA 58.309 34.615 0.00 0.00 0.00 1.52
255 256 7.260387 TCATTAAGTAGTGGGACCATGTTAA 57.740 36.000 0.00 0.00 0.00 2.01
256 257 6.877668 TCATTAAGTAGTGGGACCATGTTA 57.122 37.500 0.00 0.00 0.00 2.41
257 258 5.772393 TCATTAAGTAGTGGGACCATGTT 57.228 39.130 0.00 0.00 0.00 2.71
258 259 5.772393 TTCATTAAGTAGTGGGACCATGT 57.228 39.130 0.00 0.00 0.00 3.21
259 260 6.828273 TGATTTCATTAAGTAGTGGGACCATG 59.172 38.462 0.00 0.00 0.00 3.66
260 261 6.969043 TGATTTCATTAAGTAGTGGGACCAT 58.031 36.000 0.00 0.00 0.00 3.55
261 262 6.381498 TGATTTCATTAAGTAGTGGGACCA 57.619 37.500 0.00 0.00 0.00 4.02
262 263 6.183360 CGTTGATTTCATTAAGTAGTGGGACC 60.183 42.308 0.00 0.00 0.00 4.46
263 264 6.183360 CCGTTGATTTCATTAAGTAGTGGGAC 60.183 42.308 0.00 0.00 0.00 4.46
264 265 5.878116 CCGTTGATTTCATTAAGTAGTGGGA 59.122 40.000 0.00 0.00 0.00 4.37
265 266 5.448632 GCCGTTGATTTCATTAAGTAGTGGG 60.449 44.000 0.00 0.00 0.00 4.61
266 267 5.354234 AGCCGTTGATTTCATTAAGTAGTGG 59.646 40.000 0.00 0.00 0.00 4.00
267 268 6.422776 AGCCGTTGATTTCATTAAGTAGTG 57.577 37.500 0.00 0.00 0.00 2.74
268 269 5.291128 CGAGCCGTTGATTTCATTAAGTAGT 59.709 40.000 0.00 0.00 0.00 2.73
269 270 5.276868 CCGAGCCGTTGATTTCATTAAGTAG 60.277 44.000 0.00 0.00 0.00 2.57
270 271 4.569162 CCGAGCCGTTGATTTCATTAAGTA 59.431 41.667 0.00 0.00 0.00 2.24
271 272 3.374058 CCGAGCCGTTGATTTCATTAAGT 59.626 43.478 0.00 0.00 0.00 2.24
272 273 3.621268 TCCGAGCCGTTGATTTCATTAAG 59.379 43.478 0.00 0.00 0.00 1.85
273 274 3.601435 TCCGAGCCGTTGATTTCATTAA 58.399 40.909 0.00 0.00 0.00 1.40
274 275 3.254470 TCCGAGCCGTTGATTTCATTA 57.746 42.857 0.00 0.00 0.00 1.90
275 276 2.107950 TCCGAGCCGTTGATTTCATT 57.892 45.000 0.00 0.00 0.00 2.57
276 277 1.942657 CATCCGAGCCGTTGATTTCAT 59.057 47.619 0.00 0.00 0.00 2.57
277 278 1.338674 ACATCCGAGCCGTTGATTTCA 60.339 47.619 0.00 0.00 0.00 2.69
278 279 1.369625 ACATCCGAGCCGTTGATTTC 58.630 50.000 0.00 0.00 0.00 2.17
279 280 2.684001 TACATCCGAGCCGTTGATTT 57.316 45.000 0.00 0.00 0.00 2.17
280 281 2.910688 ATACATCCGAGCCGTTGATT 57.089 45.000 0.00 0.00 0.00 2.57
281 282 2.910688 AATACATCCGAGCCGTTGAT 57.089 45.000 0.00 0.00 0.00 2.57
282 283 5.654603 ATATAATACATCCGAGCCGTTGA 57.345 39.130 0.00 0.00 0.00 3.18
283 284 6.561614 AGTATATAATACATCCGAGCCGTTG 58.438 40.000 0.33 0.00 0.00 4.10
284 285 6.602406 AGAGTATATAATACATCCGAGCCGTT 59.398 38.462 0.33 0.00 0.00 4.44
285 286 6.120905 AGAGTATATAATACATCCGAGCCGT 58.879 40.000 0.33 0.00 0.00 5.68
286 287 6.260271 TGAGAGTATATAATACATCCGAGCCG 59.740 42.308 0.33 0.00 0.00 5.52
287 288 7.419204 GTGAGAGTATATAATACATCCGAGCC 58.581 42.308 0.33 0.00 0.00 4.70
288 289 7.283580 AGGTGAGAGTATATAATACATCCGAGC 59.716 40.741 0.33 0.00 0.00 5.03
289 290 8.740123 AGGTGAGAGTATATAATACATCCGAG 57.260 38.462 0.33 0.00 0.00 4.63
290 291 8.549731 AGAGGTGAGAGTATATAATACATCCGA 58.450 37.037 0.33 0.00 0.00 4.55
291 292 8.740123 AGAGGTGAGAGTATATAATACATCCG 57.260 38.462 0.33 0.00 0.00 4.18
292 293 9.688091 TGAGAGGTGAGAGTATATAATACATCC 57.312 37.037 0.33 0.00 0.00 3.51
302 303 9.868160 TCTTTTCATATGAGAGGTGAGAGTATA 57.132 33.333 5.39 0.00 0.00 1.47
303 304 8.774546 TCTTTTCATATGAGAGGTGAGAGTAT 57.225 34.615 5.39 0.00 0.00 2.12
304 305 8.231692 CTCTTTTCATATGAGAGGTGAGAGTA 57.768 38.462 5.39 0.00 34.63 2.59
305 306 7.111247 CTCTTTTCATATGAGAGGTGAGAGT 57.889 40.000 5.39 0.00 34.63 3.24
313 314 5.837979 TCCTCCTCCTCTTTTCATATGAGAG 59.162 44.000 5.39 9.17 37.30 3.20
314 315 5.781827 TCCTCCTCCTCTTTTCATATGAGA 58.218 41.667 5.39 0.00 31.35 3.27
315 316 5.837979 TCTCCTCCTCCTCTTTTCATATGAG 59.162 44.000 5.39 0.00 0.00 2.90
316 317 5.781827 TCTCCTCCTCCTCTTTTCATATGA 58.218 41.667 0.00 0.00 0.00 2.15
317 318 6.684897 ATCTCCTCCTCCTCTTTTCATATG 57.315 41.667 0.00 0.00 0.00 1.78
318 319 6.959366 CCTATCTCCTCCTCCTCTTTTCATAT 59.041 42.308 0.00 0.00 0.00 1.78
319 320 6.104840 TCCTATCTCCTCCTCCTCTTTTCATA 59.895 42.308 0.00 0.00 0.00 2.15
320 321 5.102870 TCCTATCTCCTCCTCCTCTTTTCAT 60.103 44.000 0.00 0.00 0.00 2.57
321 322 4.233053 TCCTATCTCCTCCTCCTCTTTTCA 59.767 45.833 0.00 0.00 0.00 2.69
322 323 4.810345 TCCTATCTCCTCCTCCTCTTTTC 58.190 47.826 0.00 0.00 0.00 2.29
323 324 4.388575 CCTCCTATCTCCTCCTCCTCTTTT 60.389 50.000 0.00 0.00 0.00 2.27
324 325 3.142028 CCTCCTATCTCCTCCTCCTCTTT 59.858 52.174 0.00 0.00 0.00 2.52
325 326 2.721906 CCTCCTATCTCCTCCTCCTCTT 59.278 54.545 0.00 0.00 0.00 2.85
326 327 2.358258 CCTCCTATCTCCTCCTCCTCT 58.642 57.143 0.00 0.00 0.00 3.69
327 328 1.357761 CCCTCCTATCTCCTCCTCCTC 59.642 61.905 0.00 0.00 0.00 3.71
328 329 1.059364 TCCCTCCTATCTCCTCCTCCT 60.059 57.143 0.00 0.00 0.00 3.69
329 330 1.462426 TCCCTCCTATCTCCTCCTCC 58.538 60.000 0.00 0.00 0.00 4.30
330 331 2.652348 TGATCCCTCCTATCTCCTCCTC 59.348 54.545 0.00 0.00 0.00 3.71
331 332 2.736910 TGATCCCTCCTATCTCCTCCT 58.263 52.381 0.00 0.00 0.00 3.69
332 333 3.272020 AGATGATCCCTCCTATCTCCTCC 59.728 52.174 0.00 0.00 0.00 4.30
333 334 4.608170 AGATGATCCCTCCTATCTCCTC 57.392 50.000 0.00 0.00 0.00 3.71
334 335 4.359528 TCAAGATGATCCCTCCTATCTCCT 59.640 45.833 0.00 0.00 0.00 3.69
335 336 4.682563 TCAAGATGATCCCTCCTATCTCC 58.317 47.826 0.00 0.00 0.00 3.71
336 337 5.046663 GGTTCAAGATGATCCCTCCTATCTC 60.047 48.000 0.00 0.00 31.60 2.75
337 338 4.843516 GGTTCAAGATGATCCCTCCTATCT 59.156 45.833 0.00 0.00 31.60 1.98
338 339 5.159273 GGTTCAAGATGATCCCTCCTATC 57.841 47.826 0.00 0.00 31.60 2.08
346 347 2.725221 AGCTGGGTTCAAGATGATCC 57.275 50.000 0.00 0.00 35.90 3.36
347 348 3.879892 GGTTAGCTGGGTTCAAGATGATC 59.120 47.826 0.00 0.00 0.00 2.92
348 349 3.266772 TGGTTAGCTGGGTTCAAGATGAT 59.733 43.478 0.00 0.00 0.00 2.45
349 350 2.642311 TGGTTAGCTGGGTTCAAGATGA 59.358 45.455 0.00 0.00 0.00 2.92
350 351 3.071874 TGGTTAGCTGGGTTCAAGATG 57.928 47.619 0.00 0.00 0.00 2.90
351 352 3.806949 TTGGTTAGCTGGGTTCAAGAT 57.193 42.857 0.00 0.00 0.00 2.40
352 353 3.117663 ACTTTGGTTAGCTGGGTTCAAGA 60.118 43.478 0.00 0.00 0.00 3.02
353 354 3.222603 ACTTTGGTTAGCTGGGTTCAAG 58.777 45.455 0.00 0.00 0.00 3.02
354 355 3.306472 ACTTTGGTTAGCTGGGTTCAA 57.694 42.857 0.00 0.00 0.00 2.69
355 356 3.306472 AACTTTGGTTAGCTGGGTTCA 57.694 42.857 0.00 0.00 33.39 3.18
356 357 4.395625 AGTAACTTTGGTTAGCTGGGTTC 58.604 43.478 0.00 0.00 38.42 3.62
357 358 4.141344 TGAGTAACTTTGGTTAGCTGGGTT 60.141 41.667 0.00 0.00 38.42 4.11
358 359 3.393278 TGAGTAACTTTGGTTAGCTGGGT 59.607 43.478 0.00 0.00 38.42 4.51
359 360 3.751698 GTGAGTAACTTTGGTTAGCTGGG 59.248 47.826 0.00 0.00 38.42 4.45
360 361 3.751698 GGTGAGTAACTTTGGTTAGCTGG 59.248 47.826 0.00 0.00 38.42 4.85
361 362 3.751698 GGGTGAGTAACTTTGGTTAGCTG 59.248 47.826 0.00 0.00 38.42 4.24
362 363 3.393278 TGGGTGAGTAACTTTGGTTAGCT 59.607 43.478 0.00 0.00 38.42 3.32
363 364 3.746940 TGGGTGAGTAACTTTGGTTAGC 58.253 45.455 0.00 0.00 38.42 3.09
364 365 6.894339 ATTTGGGTGAGTAACTTTGGTTAG 57.106 37.500 0.00 0.00 38.42 2.34
365 366 7.449086 CCTAATTTGGGTGAGTAACTTTGGTTA 59.551 37.037 0.00 0.00 36.92 2.85
366 367 6.266786 CCTAATTTGGGTGAGTAACTTTGGTT 59.733 38.462 0.00 0.00 39.26 3.67
367 368 5.773176 CCTAATTTGGGTGAGTAACTTTGGT 59.227 40.000 0.00 0.00 0.00 3.67
368 369 6.007703 TCCTAATTTGGGTGAGTAACTTTGG 58.992 40.000 6.08 0.00 0.00 3.28
369 370 7.703058 ATCCTAATTTGGGTGAGTAACTTTG 57.297 36.000 6.08 0.00 0.00 2.77
370 371 8.721133 AAATCCTAATTTGGGTGAGTAACTTT 57.279 30.769 6.08 0.00 33.78 2.66
371 372 7.947890 TGAAATCCTAATTTGGGTGAGTAACTT 59.052 33.333 6.08 0.00 35.21 2.66
372 373 7.466804 TGAAATCCTAATTTGGGTGAGTAACT 58.533 34.615 6.08 0.00 35.21 2.24
373 374 7.148069 CCTGAAATCCTAATTTGGGTGAGTAAC 60.148 40.741 6.08 0.00 35.21 2.50
374 375 6.889722 CCTGAAATCCTAATTTGGGTGAGTAA 59.110 38.462 6.08 0.00 35.21 2.24
375 376 6.011981 ACCTGAAATCCTAATTTGGGTGAGTA 60.012 38.462 6.08 0.00 36.77 2.59
376 377 5.222337 ACCTGAAATCCTAATTTGGGTGAGT 60.222 40.000 6.08 0.00 36.77 3.41
377 378 5.126061 CACCTGAAATCCTAATTTGGGTGAG 59.874 44.000 18.10 0.00 45.89 3.51
378 379 5.016173 CACCTGAAATCCTAATTTGGGTGA 58.984 41.667 18.10 0.00 45.89 4.02
379 380 5.016173 TCACCTGAAATCCTAATTTGGGTG 58.984 41.667 17.46 17.46 45.27 4.61
380 381 5.016831 GTCACCTGAAATCCTAATTTGGGT 58.983 41.667 6.08 0.00 37.73 4.51
381 382 5.126061 CAGTCACCTGAAATCCTAATTTGGG 59.874 44.000 6.08 0.00 41.50 4.12
382 383 5.945784 TCAGTCACCTGAAATCCTAATTTGG 59.054 40.000 0.00 0.00 44.67 3.28
395 396 0.032130 GCGAACAGTCAGTCACCTGA 59.968 55.000 0.00 0.00 45.44 3.86
396 397 0.946221 GGCGAACAGTCAGTCACCTG 60.946 60.000 0.00 0.00 40.25 4.00
397 398 1.367840 GGCGAACAGTCAGTCACCT 59.632 57.895 0.00 0.00 0.00 4.00
398 399 1.668151 GGGCGAACAGTCAGTCACC 60.668 63.158 0.00 0.00 0.00 4.02
399 400 0.249911 AAGGGCGAACAGTCAGTCAC 60.250 55.000 0.00 0.00 0.00 3.67
400 401 0.033504 GAAGGGCGAACAGTCAGTCA 59.966 55.000 0.00 0.00 0.00 3.41
401 402 0.670854 GGAAGGGCGAACAGTCAGTC 60.671 60.000 0.00 0.00 0.00 3.51
402 403 1.371558 GGAAGGGCGAACAGTCAGT 59.628 57.895 0.00 0.00 0.00 3.41
403 404 1.738099 CGGAAGGGCGAACAGTCAG 60.738 63.158 0.00 0.00 0.00 3.51
404 405 1.750341 TTCGGAAGGGCGAACAGTCA 61.750 55.000 0.00 0.00 0.00 3.41
405 406 1.005394 TTCGGAAGGGCGAACAGTC 60.005 57.895 0.00 0.00 0.00 3.51
406 407 1.004918 CTTCGGAAGGGCGAACAGT 60.005 57.895 9.93 0.00 0.00 3.55
407 408 0.320421 TTCTTCGGAAGGGCGAACAG 60.320 55.000 17.19 0.00 0.00 3.16
408 409 0.323629 ATTCTTCGGAAGGGCGAACA 59.676 50.000 17.19 0.00 37.38 3.18
409 410 2.304751 TATTCTTCGGAAGGGCGAAC 57.695 50.000 17.19 0.00 37.38 3.95
410 411 2.235402 AGTTATTCTTCGGAAGGGCGAA 59.765 45.455 17.19 5.38 37.38 4.70
411 412 1.829222 AGTTATTCTTCGGAAGGGCGA 59.171 47.619 17.19 2.80 37.38 5.54
412 413 2.311124 AGTTATTCTTCGGAAGGGCG 57.689 50.000 17.19 0.00 37.38 6.13
413 414 3.464907 GGTAGTTATTCTTCGGAAGGGC 58.535 50.000 17.19 4.38 37.38 5.19
414 415 3.492137 CGGGTAGTTATTCTTCGGAAGGG 60.492 52.174 17.19 0.00 37.38 3.95
415 416 3.382546 TCGGGTAGTTATTCTTCGGAAGG 59.617 47.826 17.19 0.00 37.38 3.46
416 417 4.357996 GTCGGGTAGTTATTCTTCGGAAG 58.642 47.826 11.54 11.54 37.38 3.46
417 418 3.181497 CGTCGGGTAGTTATTCTTCGGAA 60.181 47.826 0.00 0.00 38.42 4.30
418 419 2.355756 CGTCGGGTAGTTATTCTTCGGA 59.644 50.000 0.00 0.00 0.00 4.55
419 420 2.355756 TCGTCGGGTAGTTATTCTTCGG 59.644 50.000 0.00 0.00 0.00 4.30
420 421 3.680642 TCGTCGGGTAGTTATTCTTCG 57.319 47.619 0.00 0.00 0.00 3.79
421 422 4.564372 GGTTTCGTCGGGTAGTTATTCTTC 59.436 45.833 0.00 0.00 0.00 2.87
422 423 4.021192 TGGTTTCGTCGGGTAGTTATTCTT 60.021 41.667 0.00 0.00 0.00 2.52
423 424 3.511146 TGGTTTCGTCGGGTAGTTATTCT 59.489 43.478 0.00 0.00 0.00 2.40
424 425 3.614176 GTGGTTTCGTCGGGTAGTTATTC 59.386 47.826 0.00 0.00 0.00 1.75
425 426 3.259123 AGTGGTTTCGTCGGGTAGTTATT 59.741 43.478 0.00 0.00 0.00 1.40
426 427 2.827921 AGTGGTTTCGTCGGGTAGTTAT 59.172 45.455 0.00 0.00 0.00 1.89
427 428 2.238521 AGTGGTTTCGTCGGGTAGTTA 58.761 47.619 0.00 0.00 0.00 2.24
428 429 1.043022 AGTGGTTTCGTCGGGTAGTT 58.957 50.000 0.00 0.00 0.00 2.24
429 430 1.815003 CTAGTGGTTTCGTCGGGTAGT 59.185 52.381 0.00 0.00 0.00 2.73
430 431 1.468736 GCTAGTGGTTTCGTCGGGTAG 60.469 57.143 0.00 0.00 0.00 3.18
431 432 0.527565 GCTAGTGGTTTCGTCGGGTA 59.472 55.000 0.00 0.00 0.00 3.69
432 433 1.291272 GCTAGTGGTTTCGTCGGGT 59.709 57.895 0.00 0.00 0.00 5.28
433 434 1.804326 CGCTAGTGGTTTCGTCGGG 60.804 63.158 0.00 0.00 0.00 5.14
434 435 0.179145 ATCGCTAGTGGTTTCGTCGG 60.179 55.000 2.90 0.00 0.00 4.79
435 436 1.189403 GATCGCTAGTGGTTTCGTCG 58.811 55.000 2.90 0.00 0.00 5.12
436 437 1.189403 CGATCGCTAGTGGTTTCGTC 58.811 55.000 0.26 0.00 0.00 4.20
437 438 0.806868 TCGATCGCTAGTGGTTTCGT 59.193 50.000 11.09 0.00 0.00 3.85
438 439 1.189403 GTCGATCGCTAGTGGTTTCG 58.811 55.000 11.09 14.14 0.00 3.46
439 440 1.557651 GGTCGATCGCTAGTGGTTTC 58.442 55.000 11.09 0.00 0.00 2.78
440 441 0.179145 CGGTCGATCGCTAGTGGTTT 60.179 55.000 11.09 0.00 0.00 3.27
441 442 1.028330 TCGGTCGATCGCTAGTGGTT 61.028 55.000 14.58 0.00 0.00 3.67
442 443 1.437772 CTCGGTCGATCGCTAGTGGT 61.438 60.000 14.58 0.00 0.00 4.16
443 444 1.280142 CTCGGTCGATCGCTAGTGG 59.720 63.158 14.58 0.00 0.00 4.00
444 445 1.369448 GCTCGGTCGATCGCTAGTG 60.369 63.158 14.58 0.00 0.00 2.74
445 446 1.500512 GAGCTCGGTCGATCGCTAGT 61.501 60.000 14.58 0.00 31.96 2.57
446 447 1.205568 GAGCTCGGTCGATCGCTAG 59.794 63.158 14.58 7.90 31.96 3.42
447 448 1.499688 CTGAGCTCGGTCGATCGCTA 61.500 60.000 14.58 0.00 31.96 4.26
448 449 2.824489 TGAGCTCGGTCGATCGCT 60.824 61.111 14.58 5.33 35.03 4.93
449 450 2.123988 ATCTGAGCTCGGTCGATCGC 62.124 60.000 21.88 0.00 0.00 4.58
450 451 1.127766 CTATCTGAGCTCGGTCGATCG 59.872 57.143 21.88 12.98 0.00 3.69
451 452 2.095969 CACTATCTGAGCTCGGTCGATC 60.096 54.545 21.88 0.00 0.00 3.69
452 453 1.876799 CACTATCTGAGCTCGGTCGAT 59.123 52.381 21.88 15.49 0.00 3.59
453 454 1.300481 CACTATCTGAGCTCGGTCGA 58.700 55.000 21.88 9.56 0.00 4.20
454 455 0.309302 CCACTATCTGAGCTCGGTCG 59.691 60.000 21.88 13.32 0.00 4.79
455 456 0.671251 CCCACTATCTGAGCTCGGTC 59.329 60.000 21.88 0.00 0.00 4.79
456 457 1.395826 GCCCACTATCTGAGCTCGGT 61.396 60.000 21.88 11.90 0.00 4.69
457 458 1.365633 GCCCACTATCTGAGCTCGG 59.634 63.158 16.98 16.98 0.00 4.63
458 459 1.007964 CGCCCACTATCTGAGCTCG 60.008 63.158 9.64 4.19 0.00 5.03
459 460 1.300542 GCGCCCACTATCTGAGCTC 60.301 63.158 6.82 6.82 0.00 4.09
460 461 2.801631 GGCGCCCACTATCTGAGCT 61.802 63.158 18.11 0.00 0.00 4.09
461 462 2.280457 GGCGCCCACTATCTGAGC 60.280 66.667 18.11 0.00 0.00 4.26
462 463 1.068753 CTGGCGCCCACTATCTGAG 59.931 63.158 26.77 7.17 0.00 3.35
463 464 1.676678 GACTGGCGCCCACTATCTGA 61.677 60.000 26.77 0.00 0.00 3.27
464 465 1.227380 GACTGGCGCCCACTATCTG 60.227 63.158 26.77 3.27 0.00 2.90
465 466 1.685765 TGACTGGCGCCCACTATCT 60.686 57.895 26.77 0.00 0.00 1.98
466 467 1.521681 GTGACTGGCGCCCACTATC 60.522 63.158 26.77 14.34 0.00 2.08
467 468 2.584608 GTGACTGGCGCCCACTAT 59.415 61.111 26.77 4.03 0.00 2.12
468 469 4.063967 CGTGACTGGCGCCCACTA 62.064 66.667 26.77 3.41 0.00 2.74
470 471 4.367023 TACGTGACTGGCGCCCAC 62.367 66.667 26.77 23.05 0.00 4.61
471 472 4.063967 CTACGTGACTGGCGCCCA 62.064 66.667 26.77 12.55 0.00 5.36
472 473 2.703798 TACTACGTGACTGGCGCCC 61.704 63.158 26.77 9.46 0.00 6.13
473 474 1.515736 GTACTACGTGACTGGCGCC 60.516 63.158 22.73 22.73 0.00 6.53
474 475 0.729116 TAGTACTACGTGACTGGCGC 59.271 55.000 0.00 0.00 0.00 6.53
475 476 2.005451 ACTAGTACTACGTGACTGGCG 58.995 52.381 0.00 0.00 0.00 5.69
476 477 3.484886 CGAACTAGTACTACGTGACTGGC 60.485 52.174 0.00 0.00 0.00 4.85
477 478 3.063180 CCGAACTAGTACTACGTGACTGG 59.937 52.174 0.00 3.59 0.00 4.00
478 479 3.063180 CCCGAACTAGTACTACGTGACTG 59.937 52.174 0.00 0.00 0.00 3.51
479 480 3.265791 CCCGAACTAGTACTACGTGACT 58.734 50.000 0.00 1.20 0.00 3.41
480 481 2.223135 GCCCGAACTAGTACTACGTGAC 60.223 54.545 0.00 0.00 0.00 3.67
481 482 2.009774 GCCCGAACTAGTACTACGTGA 58.990 52.381 0.00 0.00 0.00 4.35
482 483 1.267732 CGCCCGAACTAGTACTACGTG 60.268 57.143 0.00 0.00 0.00 4.49
483 484 1.009829 CGCCCGAACTAGTACTACGT 58.990 55.000 0.00 0.00 0.00 3.57
484 485 0.305922 CCGCCCGAACTAGTACTACG 59.694 60.000 0.00 1.43 0.00 3.51
485 486 0.665298 CCCGCCCGAACTAGTACTAC 59.335 60.000 0.00 0.00 0.00 2.73
486 487 0.546122 TCCCGCCCGAACTAGTACTA 59.454 55.000 1.89 1.89 0.00 1.82
487 488 1.034292 GTCCCGCCCGAACTAGTACT 61.034 60.000 0.00 0.00 0.00 2.73
488 489 1.435105 GTCCCGCCCGAACTAGTAC 59.565 63.158 0.00 0.00 0.00 2.73
489 490 2.114670 CGTCCCGCCCGAACTAGTA 61.115 63.158 0.00 0.00 0.00 1.82
490 491 3.446570 CGTCCCGCCCGAACTAGT 61.447 66.667 0.00 0.00 0.00 2.57
491 492 3.122250 CTCGTCCCGCCCGAACTAG 62.122 68.421 0.00 0.00 33.34 2.57
492 493 3.136123 CTCGTCCCGCCCGAACTA 61.136 66.667 0.00 0.00 33.34 2.24
499 500 3.782443 ATGGAACCTCGTCCCGCC 61.782 66.667 0.00 0.00 36.80 6.13
500 501 2.511600 CATGGAACCTCGTCCCGC 60.512 66.667 0.00 0.00 36.80 6.13
501 502 2.511600 GCATGGAACCTCGTCCCG 60.512 66.667 0.00 0.00 36.80 5.14
502 503 2.124695 GGCATGGAACCTCGTCCC 60.125 66.667 0.00 0.00 36.80 4.46
503 504 2.124695 GGGCATGGAACCTCGTCC 60.125 66.667 0.00 0.00 38.27 4.79
504 505 1.002624 TTGGGCATGGAACCTCGTC 60.003 57.895 0.00 0.00 0.00 4.20
505 506 1.002134 CTTGGGCATGGAACCTCGT 60.002 57.895 0.00 0.00 0.00 4.18
506 507 1.750399 CCTTGGGCATGGAACCTCG 60.750 63.158 0.00 0.00 0.00 4.63
507 508 0.259938 ATCCTTGGGCATGGAACCTC 59.740 55.000 0.00 0.00 38.03 3.85
508 509 0.032813 CATCCTTGGGCATGGAACCT 60.033 55.000 0.00 0.00 38.03 3.50
509 510 0.033208 TCATCCTTGGGCATGGAACC 60.033 55.000 0.00 0.00 38.03 3.62
510 511 1.106285 GTCATCCTTGGGCATGGAAC 58.894 55.000 0.00 0.00 38.03 3.62
511 512 1.002069 AGTCATCCTTGGGCATGGAA 58.998 50.000 0.00 0.00 38.03 3.53
512 513 0.548031 GAGTCATCCTTGGGCATGGA 59.452 55.000 0.00 0.00 38.74 3.41
513 514 0.549950 AGAGTCATCCTTGGGCATGG 59.450 55.000 0.00 0.00 0.00 3.66
514 515 1.064906 ACAGAGTCATCCTTGGGCATG 60.065 52.381 0.00 0.00 0.00 4.06
515 516 1.211457 GACAGAGTCATCCTTGGGCAT 59.789 52.381 0.00 0.00 32.09 4.40
516 517 0.615331 GACAGAGTCATCCTTGGGCA 59.385 55.000 0.00 0.00 32.09 5.36
517 518 0.460987 CGACAGAGTCATCCTTGGGC 60.461 60.000 0.00 0.00 32.09 5.36
518 519 0.176680 CCGACAGAGTCATCCTTGGG 59.823 60.000 0.00 0.00 32.09 4.12
519 520 0.898320 ACCGACAGAGTCATCCTTGG 59.102 55.000 0.00 0.00 32.09 3.61
520 521 1.468224 CGACCGACAGAGTCATCCTTG 60.468 57.143 0.00 0.00 33.70 3.61
521 522 0.811915 CGACCGACAGAGTCATCCTT 59.188 55.000 0.00 0.00 33.70 3.36
522 523 1.032657 CCGACCGACAGAGTCATCCT 61.033 60.000 0.00 0.00 33.70 3.24
523 524 1.433879 CCGACCGACAGAGTCATCC 59.566 63.158 0.00 0.00 33.70 3.51
524 525 1.226717 GCCGACCGACAGAGTCATC 60.227 63.158 0.00 0.00 33.70 2.92
525 526 2.885861 GCCGACCGACAGAGTCAT 59.114 61.111 0.00 0.00 33.70 3.06
526 527 3.733960 CGCCGACCGACAGAGTCA 61.734 66.667 0.00 0.00 40.02 3.41
529 530 4.498520 ATGCGCCGACCGACAGAG 62.499 66.667 4.18 0.00 40.02 3.35
530 531 4.492160 GATGCGCCGACCGACAGA 62.492 66.667 4.18 0.00 40.02 3.41
559 560 4.785453 GAGTTGGAGGGCCTGGCG 62.785 72.222 12.95 0.00 34.31 5.69
560 561 4.785453 CGAGTTGGAGGGCCTGGC 62.785 72.222 12.95 11.05 34.31 4.85
561 562 4.785453 GCGAGTTGGAGGGCCTGG 62.785 72.222 12.95 0.00 34.31 4.45
566 567 4.821589 GAGCCGCGAGTTGGAGGG 62.822 72.222 8.23 0.00 0.00 4.30
567 568 4.069232 TGAGCCGCGAGTTGGAGG 62.069 66.667 8.23 0.00 0.00 4.30
568 569 2.811317 GTGAGCCGCGAGTTGGAG 60.811 66.667 8.23 0.00 0.00 3.86
569 570 4.717629 CGTGAGCCGCGAGTTGGA 62.718 66.667 8.23 0.00 39.94 3.53
571 572 3.470567 GACGTGAGCCGCGAGTTG 61.471 66.667 8.23 0.00 39.94 3.16
574 575 4.538283 ATCGACGTGAGCCGCGAG 62.538 66.667 8.23 0.00 44.03 5.03
623 624 1.174712 TTGCACAAGAGGCCAAGAGC 61.175 55.000 5.01 1.22 42.60 4.09
724 733 2.920912 AAAGGGAGGCGACGTCCA 60.921 61.111 10.58 0.00 35.57 4.02
748 757 2.800736 GGCCGGACGTACGTACAT 59.199 61.111 28.96 10.69 0.00 2.29
751 760 4.769063 TCCGGCCGGACGTACGTA 62.769 66.667 42.66 19.15 39.76 3.57
771 780 4.012895 AAGTTTCGTGCGCTGCCG 62.013 61.111 9.73 8.75 37.57 5.69
875 884 3.020237 GCTCCACTCCCTTCGTCCC 62.020 68.421 0.00 0.00 0.00 4.46
927 936 4.803426 GACGGACGAGGCAGCCAG 62.803 72.222 15.80 9.97 0.00 4.85
1457 1471 4.821589 CTGCGGCCGTCCTCTTCC 62.822 72.222 28.70 7.68 0.00 3.46
1497 1511 2.233605 CTGGGTACACGGGCATTCGA 62.234 60.000 0.00 0.00 0.00 3.71
1509 1523 2.112815 GCCCGTCATTGCTGGGTAC 61.113 63.158 12.79 0.00 45.19 3.34
1611 1639 5.363939 ACTATCAAGGAAGTTAGCTCATGC 58.636 41.667 0.00 0.00 40.05 4.06
1666 1694 2.029828 CCCCTAGCTACGCTACTGATTG 60.030 54.545 0.00 0.00 40.44 2.67
1667 1695 2.240279 CCCCTAGCTACGCTACTGATT 58.760 52.381 0.00 0.00 40.44 2.57
1668 1696 1.548128 CCCCCTAGCTACGCTACTGAT 60.548 57.143 0.00 0.00 40.44 2.90
1669 1697 0.178998 CCCCCTAGCTACGCTACTGA 60.179 60.000 0.00 0.00 40.44 3.41
1674 1702 2.444140 CCACCCCCTAGCTACGCT 60.444 66.667 0.00 0.00 43.41 5.07
1720 1748 7.147479 ACACTATACACAAAAGCTATGGAGGAT 60.147 37.037 4.63 2.03 0.00 3.24
1724 1752 8.074613 ACTACACTATACACAAAAGCTATGGA 57.925 34.615 4.63 0.00 0.00 3.41
1792 5244 3.106054 TGCTAGGGTGGTTCGGTAATAA 58.894 45.455 0.00 0.00 0.00 1.40
1801 5253 1.937191 CCCAATTTGCTAGGGTGGTT 58.063 50.000 0.00 0.00 37.81 3.67
1810 5262 1.315257 CGTAGCCAGCCCAATTTGCT 61.315 55.000 0.00 0.00 40.41 3.91
1863 5315 9.582431 GCACAGTTCAACTTTATATACAGACTA 57.418 33.333 2.88 0.00 0.00 2.59
1864 5316 8.314751 AGCACAGTTCAACTTTATATACAGACT 58.685 33.333 2.88 0.00 0.00 3.24
1865 5317 8.480643 AGCACAGTTCAACTTTATATACAGAC 57.519 34.615 2.88 0.00 0.00 3.51
1868 5320 9.938280 AGTTAGCACAGTTCAACTTTATATACA 57.062 29.630 0.00 0.00 0.00 2.29
1871 5323 9.726438 AGAAGTTAGCACAGTTCAACTTTATAT 57.274 29.630 0.00 0.00 40.38 0.86
1872 5324 9.555727 AAGAAGTTAGCACAGTTCAACTTTATA 57.444 29.630 0.00 0.00 40.38 0.98
1873 5325 8.345565 CAAGAAGTTAGCACAGTTCAACTTTAT 58.654 33.333 0.00 0.00 40.38 1.40
1874 5326 7.678690 GCAAGAAGTTAGCACAGTTCAACTTTA 60.679 37.037 0.00 0.00 40.38 1.85
1875 5327 6.555315 CAAGAAGTTAGCACAGTTCAACTTT 58.445 36.000 0.00 0.00 40.38 2.66
1876 5328 5.449177 GCAAGAAGTTAGCACAGTTCAACTT 60.449 40.000 0.00 4.35 42.36 2.66
1877 5329 4.035675 GCAAGAAGTTAGCACAGTTCAACT 59.964 41.667 5.73 0.00 32.73 3.16
1878 5330 4.282873 GCAAGAAGTTAGCACAGTTCAAC 58.717 43.478 5.73 0.00 0.00 3.18
1879 5331 3.315191 GGCAAGAAGTTAGCACAGTTCAA 59.685 43.478 5.73 0.00 0.00 2.69
1880 5332 2.878406 GGCAAGAAGTTAGCACAGTTCA 59.122 45.455 5.73 0.00 0.00 3.18
1881 5333 2.096218 CGGCAAGAAGTTAGCACAGTTC 60.096 50.000 0.00 0.00 0.00 3.01
1882 5334 1.873591 CGGCAAGAAGTTAGCACAGTT 59.126 47.619 0.00 0.00 0.00 3.16
1897 5349 1.005156 GCAAAATTCCTGCCGGCAA 60.005 52.632 32.09 17.23 33.51 4.52
1912 5364 0.961857 AGCATGCGGATCTGTTGCAA 60.962 50.000 24.40 0.00 42.65 4.08
1961 5416 1.640428 CACATGCACTCGTACGGATT 58.360 50.000 16.52 0.00 0.00 3.01
2051 5507 4.074259 TCTGTCTTTTACTGCATGCATGT 58.926 39.130 26.79 21.81 0.00 3.21
2092 5549 9.850198 TTTTGAATTTTCTCATTGGGAAGAATT 57.150 25.926 14.12 14.12 0.00 2.17
2214 5671 5.140077 AGAAAAAGAAGTCGTCGAAACAC 57.860 39.130 0.00 0.00 0.00 3.32
2263 5720 4.276642 TGCACCACAGGCATGATAATTTA 58.723 39.130 4.84 0.00 36.11 1.40
2266 5723 2.440517 TGCACCACAGGCATGATAAT 57.559 45.000 4.84 0.00 36.11 1.28
2322 5779 8.768501 AGAGAAGGTTGGAGAAACTTTTTATT 57.231 30.769 0.00 0.00 39.34 1.40
2333 5792 2.634940 CCTGTGAAGAGAAGGTTGGAGA 59.365 50.000 0.00 0.00 0.00 3.71
2386 5847 5.363939 CAGGGAAGAACTAGGATGACATTC 58.636 45.833 0.00 0.00 0.00 2.67
2402 5864 5.163416 ACATTTGAAGTTTCAACCAGGGAAG 60.163 40.000 6.79 0.00 45.99 3.46
2404 5866 4.285863 ACATTTGAAGTTTCAACCAGGGA 58.714 39.130 6.79 0.00 45.99 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.