Multiple sequence alignment - TraesCS7A01G105000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G105000 chr7A 100.000 2843 0 0 1 2843 63734119 63731277 0.000000e+00 5251
1 TraesCS7A01G105000 chr7A 93.681 728 43 2 1 725 106019716 106020443 0.000000e+00 1086
2 TraesCS7A01G105000 chr7A 81.012 1127 172 25 732 1823 63502739 63501620 0.000000e+00 857
3 TraesCS7A01G105000 chr7A 87.639 720 84 5 726 1440 63724116 63724835 0.000000e+00 832
4 TraesCS7A01G105000 chr7A 92.326 430 32 1 1416 1845 63724843 63725271 6.730000e-171 610
5 TraesCS7A01G105000 chr7A 77.074 458 87 13 2113 2556 571739964 571740417 6.080000e-62 248
6 TraesCS7A01G105000 chr7D 87.790 1163 103 19 726 1849 59105827 59106989 0.000000e+00 1325
7 TraesCS7A01G105000 chr7D 94.729 702 37 0 726 1427 59111482 59110781 0.000000e+00 1092
8 TraesCS7A01G105000 chr7D 94.240 434 24 1 1416 1849 59110758 59110326 0.000000e+00 662
9 TraesCS7A01G105000 chr7D 87.631 574 41 11 1306 1849 58928863 58928290 8.590000e-180 640
10 TraesCS7A01G105000 chr7D 81.857 711 117 10 732 1440 58896286 58895586 3.160000e-164 588
11 TraesCS7A01G105000 chr7D 85.075 402 59 1 1416 1817 58895574 58895174 2.640000e-110 409
12 TraesCS7A01G105000 chr7D 75.419 537 109 8 2113 2645 386763070 386762553 3.660000e-59 239
13 TraesCS7A01G105000 chr7D 79.110 292 53 7 2117 2403 484747830 484747542 8.040000e-46 195
14 TraesCS7A01G105000 chr4A 87.155 1160 113 17 726 1849 676879918 676878759 0.000000e+00 1284
15 TraesCS7A01G105000 chr4A 94.872 702 36 0 726 1427 676932475 676931774 0.000000e+00 1098
16 TraesCS7A01G105000 chr4A 90.971 731 60 3 1 725 743038425 743037695 0.000000e+00 979
17 TraesCS7A01G105000 chr4A 90.909 726 63 2 3 725 603962628 603961903 0.000000e+00 972
18 TraesCS7A01G105000 chr4A 95.409 501 19 2 228 725 624917213 624917712 0.000000e+00 795
19 TraesCS7A01G105000 chr4A 94.009 434 24 2 1416 1849 676931751 676931320 0.000000e+00 656
20 TraesCS7A01G105000 chr4A 90.826 327 24 1 1 321 624916929 624917255 1.560000e-117 433
21 TraesCS7A01G105000 chr6B 90.960 708 61 1 18 725 504155027 504155731 0.000000e+00 950
22 TraesCS7A01G105000 chr6B 88.923 325 28 3 1 318 44830020 44829697 7.380000e-106 394
23 TraesCS7A01G105000 chr6B 75.529 425 85 15 2113 2526 44081623 44082039 1.040000e-44 191
24 TraesCS7A01G105000 chr3B 87.330 734 84 2 1 725 18297849 18298582 0.000000e+00 832
25 TraesCS7A01G105000 chr4B 94.444 504 25 2 228 728 665551235 665551738 0.000000e+00 773
26 TraesCS7A01G105000 chr4B 89.908 327 27 1 1 321 665550951 665551277 1.580000e-112 416
27 TraesCS7A01G105000 chr1A 94.578 498 23 3 231 725 570163573 570163077 0.000000e+00 767
28 TraesCS7A01G105000 chr1A 90.090 333 27 2 1 327 570163860 570163528 7.280000e-116 427
29 TraesCS7A01G105000 chr1B 89.673 581 53 5 151 725 870705 870126 0.000000e+00 734
30 TraesCS7A01G105000 chr1B 76.309 401 88 6 2113 2508 547581647 547582045 1.030000e-49 207
31 TraesCS7A01G105000 chr1B 75.976 333 79 1 2335 2666 632037023 632036691 1.350000e-38 171
32 TraesCS7A01G105000 chr4D 75.868 547 117 15 2113 2651 362801434 362800895 6.040000e-67 265
33 TraesCS7A01G105000 chr4D 77.778 405 82 6 2113 2514 336835251 336834852 2.830000e-60 243
34 TraesCS7A01G105000 chr2D 76.484 455 94 11 2113 2561 500361091 500361538 4.740000e-58 235
35 TraesCS7A01G105000 chr2B 74.907 538 123 11 2114 2644 441104542 441104010 4.740000e-58 235


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G105000 chr7A 63731277 63734119 2842 True 5251.0 5251 100.0000 1 2843 1 chr7A.!!$R2 2842
1 TraesCS7A01G105000 chr7A 106019716 106020443 727 False 1086.0 1086 93.6810 1 725 1 chr7A.!!$F1 724
2 TraesCS7A01G105000 chr7A 63501620 63502739 1119 True 857.0 857 81.0120 732 1823 1 chr7A.!!$R1 1091
3 TraesCS7A01G105000 chr7A 63724116 63725271 1155 False 721.0 832 89.9825 726 1845 2 chr7A.!!$F3 1119
4 TraesCS7A01G105000 chr7D 59105827 59106989 1162 False 1325.0 1325 87.7900 726 1849 1 chr7D.!!$F1 1123
5 TraesCS7A01G105000 chr7D 59110326 59111482 1156 True 877.0 1092 94.4845 726 1849 2 chr7D.!!$R5 1123
6 TraesCS7A01G105000 chr7D 58928290 58928863 573 True 640.0 640 87.6310 1306 1849 1 chr7D.!!$R1 543
7 TraesCS7A01G105000 chr7D 58895174 58896286 1112 True 498.5 588 83.4660 732 1817 2 chr7D.!!$R4 1085
8 TraesCS7A01G105000 chr7D 386762553 386763070 517 True 239.0 239 75.4190 2113 2645 1 chr7D.!!$R2 532
9 TraesCS7A01G105000 chr4A 676878759 676879918 1159 True 1284.0 1284 87.1550 726 1849 1 chr4A.!!$R2 1123
10 TraesCS7A01G105000 chr4A 743037695 743038425 730 True 979.0 979 90.9710 1 725 1 chr4A.!!$R3 724
11 TraesCS7A01G105000 chr4A 603961903 603962628 725 True 972.0 972 90.9090 3 725 1 chr4A.!!$R1 722
12 TraesCS7A01G105000 chr4A 676931320 676932475 1155 True 877.0 1098 94.4405 726 1849 2 chr4A.!!$R4 1123
13 TraesCS7A01G105000 chr4A 624916929 624917712 783 False 614.0 795 93.1175 1 725 2 chr4A.!!$F1 724
14 TraesCS7A01G105000 chr6B 504155027 504155731 704 False 950.0 950 90.9600 18 725 1 chr6B.!!$F2 707
15 TraesCS7A01G105000 chr3B 18297849 18298582 733 False 832.0 832 87.3300 1 725 1 chr3B.!!$F1 724
16 TraesCS7A01G105000 chr4B 665550951 665551738 787 False 594.5 773 92.1760 1 728 2 chr4B.!!$F1 727
17 TraesCS7A01G105000 chr1A 570163077 570163860 783 True 597.0 767 92.3340 1 725 2 chr1A.!!$R1 724
18 TraesCS7A01G105000 chr1B 870126 870705 579 True 734.0 734 89.6730 151 725 1 chr1B.!!$R1 574
19 TraesCS7A01G105000 chr4D 362800895 362801434 539 True 265.0 265 75.8680 2113 2651 1 chr4D.!!$R2 538
20 TraesCS7A01G105000 chr2B 441104010 441104542 532 True 235.0 235 74.9070 2114 2644 1 chr2B.!!$R1 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
910 1046 0.178955 TCTGTAGGTGGTCCGGTTCA 60.179 55.0 0.0 0.0 39.05 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 2071 0.037326 TTCGAGGTTGAGCTTCGCAT 60.037 50.0 0.0 0.0 44.87 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
283 398 2.361357 AGCGCCGTAGAGACCAGT 60.361 61.111 2.29 0.00 0.00 4.00
340 455 4.814294 GTAGTGCACCGGGGCGAG 62.814 72.222 26.48 0.00 36.28 5.03
757 893 3.307906 CCAACGTCCCCGAGGTCA 61.308 66.667 0.00 0.00 37.88 4.02
870 1006 2.938956 GGATGATCCAGATCCCGTTT 57.061 50.000 6.60 0.00 36.28 3.60
895 1031 4.427661 GGCTCGCGCTGTCTCTGT 62.428 66.667 5.56 0.00 36.09 3.41
910 1046 0.178955 TCTGTAGGTGGTCCGGTTCA 60.179 55.000 0.00 0.00 39.05 3.18
951 1087 2.978010 GTCGGCACCAACCACCTG 60.978 66.667 0.00 0.00 0.00 4.00
1109 1251 4.415332 GCTGGACGCCGAGTTCGA 62.415 66.667 2.59 0.00 43.02 3.71
1110 1252 2.490217 CTGGACGCCGAGTTCGAT 59.510 61.111 2.59 0.00 43.02 3.59
1122 1264 0.892755 AGTTCGATAGGTTCACGCCA 59.107 50.000 0.00 0.00 0.00 5.69
1184 1326 2.098871 CGTGTACCGCATCGACGA 59.901 61.111 0.00 0.00 34.06 4.20
1404 1549 0.390124 GGAACGTGGTCACCTACACA 59.610 55.000 0.00 0.00 37.45 3.72
1471 1649 1.451028 GTGATGAGCAGGGACAGGC 60.451 63.158 0.00 0.00 0.00 4.85
1530 1708 1.004679 GTACAAGGACGGCGGGAAA 60.005 57.895 13.24 0.00 0.00 3.13
1845 2023 1.444553 CGGTTCTCGTCTGTGAGCC 60.445 63.158 0.00 0.00 36.12 4.70
1849 2027 3.753434 CTCGTCTGTGAGCCCGCT 61.753 66.667 0.00 0.00 0.00 5.52
1850 2028 2.360726 TCGTCTGTGAGCCCGCTA 60.361 61.111 0.00 0.00 0.00 4.26
1851 2029 1.729470 CTCGTCTGTGAGCCCGCTAT 61.729 60.000 0.00 0.00 0.00 2.97
1852 2030 0.464916 TCGTCTGTGAGCCCGCTATA 60.465 55.000 0.00 0.00 0.00 1.31
1853 2031 0.039978 CGTCTGTGAGCCCGCTATAG 60.040 60.000 0.00 0.00 0.00 1.31
1854 2032 1.319541 GTCTGTGAGCCCGCTATAGA 58.680 55.000 3.21 0.00 0.00 1.98
1855 2033 1.889829 GTCTGTGAGCCCGCTATAGAT 59.110 52.381 3.21 0.00 0.00 1.98
1856 2034 1.889170 TCTGTGAGCCCGCTATAGATG 59.111 52.381 3.21 0.00 0.00 2.90
1857 2035 1.615883 CTGTGAGCCCGCTATAGATGT 59.384 52.381 3.21 0.00 0.00 3.06
1858 2036 2.036475 CTGTGAGCCCGCTATAGATGTT 59.964 50.000 3.21 0.00 0.00 2.71
1859 2037 2.434336 TGTGAGCCCGCTATAGATGTTT 59.566 45.455 3.21 0.00 0.00 2.83
1860 2038 3.118408 TGTGAGCCCGCTATAGATGTTTT 60.118 43.478 3.21 0.00 0.00 2.43
1861 2039 3.248602 GTGAGCCCGCTATAGATGTTTTG 59.751 47.826 3.21 0.00 0.00 2.44
1862 2040 3.118408 TGAGCCCGCTATAGATGTTTTGT 60.118 43.478 3.21 0.00 0.00 2.83
1863 2041 3.206150 AGCCCGCTATAGATGTTTTGTG 58.794 45.455 3.21 0.00 0.00 3.33
1864 2042 2.943033 GCCCGCTATAGATGTTTTGTGT 59.057 45.455 3.21 0.00 0.00 3.72
1865 2043 3.377172 GCCCGCTATAGATGTTTTGTGTT 59.623 43.478 3.21 0.00 0.00 3.32
1866 2044 4.142469 GCCCGCTATAGATGTTTTGTGTTT 60.142 41.667 3.21 0.00 0.00 2.83
1867 2045 5.331902 CCCGCTATAGATGTTTTGTGTTTG 58.668 41.667 3.21 0.00 0.00 2.93
1868 2046 5.331902 CCGCTATAGATGTTTTGTGTTTGG 58.668 41.667 3.21 0.00 0.00 3.28
1869 2047 4.793216 CGCTATAGATGTTTTGTGTTTGGC 59.207 41.667 3.21 0.00 0.00 4.52
1870 2048 5.618863 CGCTATAGATGTTTTGTGTTTGGCA 60.619 40.000 3.21 0.00 0.00 4.92
1871 2049 6.332630 GCTATAGATGTTTTGTGTTTGGCAT 58.667 36.000 3.21 0.00 0.00 4.40
1872 2050 6.473455 GCTATAGATGTTTTGTGTTTGGCATC 59.527 38.462 3.21 0.00 34.61 3.91
1873 2051 4.669206 AGATGTTTTGTGTTTGGCATCA 57.331 36.364 0.00 0.00 36.24 3.07
1874 2052 5.021033 AGATGTTTTGTGTTTGGCATCAA 57.979 34.783 0.00 0.00 36.24 2.57
1875 2053 4.810491 AGATGTTTTGTGTTTGGCATCAAC 59.190 37.500 0.00 0.00 36.24 3.18
1876 2054 2.926200 TGTTTTGTGTTTGGCATCAACG 59.074 40.909 0.00 0.00 31.78 4.10
1877 2055 3.182967 GTTTTGTGTTTGGCATCAACGA 58.817 40.909 0.00 0.00 31.78 3.85
1878 2056 3.724508 TTTGTGTTTGGCATCAACGAT 57.275 38.095 0.00 0.00 31.78 3.73
1879 2057 2.702898 TGTGTTTGGCATCAACGATG 57.297 45.000 0.00 0.00 42.37 3.84
1888 2066 2.028420 CATCAACGATGCAGGGAAGA 57.972 50.000 0.00 0.00 33.17 2.87
1889 2067 2.569059 CATCAACGATGCAGGGAAGAT 58.431 47.619 0.00 0.00 33.17 2.40
1890 2068 3.732212 CATCAACGATGCAGGGAAGATA 58.268 45.455 0.00 0.00 33.17 1.98
1891 2069 3.459232 TCAACGATGCAGGGAAGATAG 57.541 47.619 0.00 0.00 0.00 2.08
1892 2070 1.869767 CAACGATGCAGGGAAGATAGC 59.130 52.381 0.00 0.00 0.00 2.97
1893 2071 1.123077 ACGATGCAGGGAAGATAGCA 58.877 50.000 0.00 0.00 41.73 3.49
1895 2073 2.074576 CGATGCAGGGAAGATAGCATG 58.925 52.381 3.23 0.00 46.71 4.06
1896 2074 1.811359 GATGCAGGGAAGATAGCATGC 59.189 52.381 10.51 10.51 46.71 4.06
1897 2075 0.533531 TGCAGGGAAGATAGCATGCG 60.534 55.000 13.01 0.00 36.47 4.73
1898 2076 0.250038 GCAGGGAAGATAGCATGCGA 60.250 55.000 13.01 7.70 0.00 5.10
1899 2077 1.811558 GCAGGGAAGATAGCATGCGAA 60.812 52.381 13.01 5.00 0.00 4.70
1900 2078 2.141517 CAGGGAAGATAGCATGCGAAG 58.858 52.381 13.01 0.00 0.00 3.79
1916 2094 2.904915 CGAAGCTCAACCTCGAAAAAC 58.095 47.619 0.00 0.00 0.00 2.43
1917 2095 2.286833 CGAAGCTCAACCTCGAAAAACA 59.713 45.455 0.00 0.00 0.00 2.83
1918 2096 3.058914 CGAAGCTCAACCTCGAAAAACAT 60.059 43.478 0.00 0.00 0.00 2.71
1919 2097 4.151689 CGAAGCTCAACCTCGAAAAACATA 59.848 41.667 0.00 0.00 0.00 2.29
1920 2098 5.613358 AAGCTCAACCTCGAAAAACATAG 57.387 39.130 0.00 0.00 0.00 2.23
1921 2099 3.437049 AGCTCAACCTCGAAAAACATAGC 59.563 43.478 0.00 0.00 0.00 2.97
1922 2100 3.437049 GCTCAACCTCGAAAAACATAGCT 59.563 43.478 0.00 0.00 0.00 3.32
1923 2101 4.083271 GCTCAACCTCGAAAAACATAGCTT 60.083 41.667 0.00 0.00 0.00 3.74
1924 2102 5.607119 TCAACCTCGAAAAACATAGCTTC 57.393 39.130 0.00 0.00 0.00 3.86
1925 2103 4.151689 TCAACCTCGAAAAACATAGCTTCG 59.848 41.667 0.00 0.00 42.49 3.79
1926 2104 3.921677 ACCTCGAAAAACATAGCTTCGA 58.078 40.909 4.52 4.52 46.23 3.71
1929 2107 3.921677 TCGAAAAACATAGCTTCGAGGT 58.078 40.909 0.00 0.00 44.26 3.85
1930 2108 4.312443 TCGAAAAACATAGCTTCGAGGTT 58.688 39.130 0.00 0.00 44.26 3.50
1931 2109 4.151689 TCGAAAAACATAGCTTCGAGGTTG 59.848 41.667 0.00 0.00 44.26 3.77
1932 2110 4.084013 CGAAAAACATAGCTTCGAGGTTGT 60.084 41.667 0.00 0.00 43.53 3.32
1933 2111 5.119588 CGAAAAACATAGCTTCGAGGTTGTA 59.880 40.000 0.00 0.00 43.53 2.41
1934 2112 6.481954 AAAAACATAGCTTCGAGGTTGTAG 57.518 37.500 0.00 0.00 0.00 2.74
1935 2113 3.166489 ACATAGCTTCGAGGTTGTAGC 57.834 47.619 0.00 0.00 0.00 3.58
1936 2114 2.761208 ACATAGCTTCGAGGTTGTAGCT 59.239 45.455 11.48 11.48 45.32 3.32
1937 2115 3.952323 ACATAGCTTCGAGGTTGTAGCTA 59.048 43.478 14.73 14.73 46.67 3.32
1939 2117 3.444703 AGCTTCGAGGTTGTAGCTATG 57.555 47.619 5.26 0.00 41.87 2.23
1940 2118 2.101582 AGCTTCGAGGTTGTAGCTATGG 59.898 50.000 5.26 0.00 41.87 2.74
1941 2119 2.474816 CTTCGAGGTTGTAGCTATGGC 58.525 52.381 0.00 0.00 39.06 4.40
1942 2120 0.384309 TCGAGGTTGTAGCTATGGCG 59.616 55.000 0.00 0.00 44.37 5.69
1943 2121 0.384309 CGAGGTTGTAGCTATGGCGA 59.616 55.000 0.00 0.00 44.37 5.54
1944 2122 1.600663 CGAGGTTGTAGCTATGGCGAG 60.601 57.143 0.00 0.00 44.37 5.03
1945 2123 0.105039 AGGTTGTAGCTATGGCGAGC 59.895 55.000 0.00 3.14 44.37 5.03
1951 2129 3.819188 GCTATGGCGAGCTTGCTT 58.181 55.556 25.01 15.23 39.50 3.91
1952 2130 1.354506 GCTATGGCGAGCTTGCTTG 59.645 57.895 25.01 13.31 39.50 4.01
1953 2131 1.372087 GCTATGGCGAGCTTGCTTGT 61.372 55.000 25.01 13.50 39.50 3.16
1954 2132 1.939974 CTATGGCGAGCTTGCTTGTA 58.060 50.000 25.01 13.87 34.52 2.41
1955 2133 2.279741 CTATGGCGAGCTTGCTTGTAA 58.720 47.619 25.01 7.04 34.52 2.41
1956 2134 0.804989 ATGGCGAGCTTGCTTGTAAC 59.195 50.000 25.01 8.21 34.52 2.50
1957 2135 0.533978 TGGCGAGCTTGCTTGTAACA 60.534 50.000 25.01 10.81 34.52 2.41
1958 2136 0.804989 GGCGAGCTTGCTTGTAACAT 59.195 50.000 25.01 0.00 34.52 2.71
1959 2137 1.202076 GGCGAGCTTGCTTGTAACATC 60.202 52.381 25.01 1.59 34.52 3.06
1960 2138 1.464608 GCGAGCTTGCTTGTAACATCA 59.535 47.619 19.25 0.00 0.00 3.07
1961 2139 2.095768 GCGAGCTTGCTTGTAACATCAA 60.096 45.455 19.25 0.00 0.00 2.57
1962 2140 3.609175 GCGAGCTTGCTTGTAACATCAAA 60.609 43.478 19.25 0.00 0.00 2.69
1963 2141 4.536065 CGAGCTTGCTTGTAACATCAAAA 58.464 39.130 0.00 0.00 0.00 2.44
1964 2142 4.975502 CGAGCTTGCTTGTAACATCAAAAA 59.024 37.500 0.00 0.00 0.00 1.94
1965 2143 5.630680 CGAGCTTGCTTGTAACATCAAAAAT 59.369 36.000 0.00 0.00 0.00 1.82
1966 2144 6.801377 CGAGCTTGCTTGTAACATCAAAAATA 59.199 34.615 0.00 0.00 0.00 1.40
1967 2145 7.325821 CGAGCTTGCTTGTAACATCAAAAATAA 59.674 33.333 0.00 0.00 0.00 1.40
1968 2146 8.885494 AGCTTGCTTGTAACATCAAAAATAAA 57.115 26.923 0.00 0.00 0.00 1.40
1969 2147 8.764287 AGCTTGCTTGTAACATCAAAAATAAAC 58.236 29.630 0.00 0.00 0.00 2.01
1970 2148 8.764287 GCTTGCTTGTAACATCAAAAATAAACT 58.236 29.630 0.00 0.00 0.00 2.66
1972 2150 8.071122 TGCTTGTAACATCAAAAATAAACTGC 57.929 30.769 0.00 0.00 0.00 4.40
1973 2151 7.708322 TGCTTGTAACATCAAAAATAAACTGCA 59.292 29.630 0.00 0.00 0.00 4.41
1974 2152 8.003784 GCTTGTAACATCAAAAATAAACTGCAC 58.996 33.333 0.00 0.00 0.00 4.57
1975 2153 7.616103 TGTAACATCAAAAATAAACTGCACG 57.384 32.000 0.00 0.00 0.00 5.34
1976 2154 7.418408 TGTAACATCAAAAATAAACTGCACGA 58.582 30.769 0.00 0.00 0.00 4.35
1977 2155 6.747659 AACATCAAAAATAAACTGCACGAC 57.252 33.333 0.00 0.00 0.00 4.34
1978 2156 5.826586 ACATCAAAAATAAACTGCACGACA 58.173 33.333 0.00 0.00 0.00 4.35
1979 2157 6.446318 ACATCAAAAATAAACTGCACGACAT 58.554 32.000 0.00 0.00 0.00 3.06
1980 2158 7.589395 ACATCAAAAATAAACTGCACGACATA 58.411 30.769 0.00 0.00 0.00 2.29
1981 2159 7.750458 ACATCAAAAATAAACTGCACGACATAG 59.250 33.333 0.00 0.00 0.00 2.23
1982 2160 6.083630 TCAAAAATAAACTGCACGACATAGC 58.916 36.000 0.00 0.00 0.00 2.97
1983 2161 5.621197 AAAATAAACTGCACGACATAGCA 57.379 34.783 0.00 0.00 39.25 3.49
1984 2162 4.600012 AATAAACTGCACGACATAGCAC 57.400 40.909 0.00 0.00 36.62 4.40
1985 2163 1.156736 AAACTGCACGACATAGCACC 58.843 50.000 0.00 0.00 36.62 5.01
1986 2164 0.673644 AACTGCACGACATAGCACCC 60.674 55.000 0.00 0.00 36.62 4.61
1987 2165 2.125713 TGCACGACATAGCACCCG 60.126 61.111 0.00 0.00 35.51 5.28
1988 2166 2.125673 GCACGACATAGCACCCGT 60.126 61.111 0.00 0.00 35.46 5.28
1989 2167 1.140161 GCACGACATAGCACCCGTA 59.860 57.895 0.00 0.00 33.62 4.02
1990 2168 0.458889 GCACGACATAGCACCCGTAA 60.459 55.000 0.00 0.00 33.62 3.18
1991 2169 1.805120 GCACGACATAGCACCCGTAAT 60.805 52.381 0.00 0.00 33.62 1.89
1992 2170 2.546778 CACGACATAGCACCCGTAATT 58.453 47.619 0.00 0.00 33.62 1.40
1993 2171 3.708890 CACGACATAGCACCCGTAATTA 58.291 45.455 0.00 0.00 33.62 1.40
1994 2172 4.304110 CACGACATAGCACCCGTAATTAT 58.696 43.478 0.00 0.00 33.62 1.28
1995 2173 4.149922 CACGACATAGCACCCGTAATTATG 59.850 45.833 0.00 0.00 33.62 1.90
1996 2174 3.122948 CGACATAGCACCCGTAATTATGC 59.877 47.826 0.00 0.07 38.39 3.14
1999 2177 1.967319 AGCACCCGTAATTATGCTGG 58.033 50.000 9.88 4.83 46.42 4.85
2000 2178 1.211949 AGCACCCGTAATTATGCTGGT 59.788 47.619 9.88 5.39 46.42 4.00
2001 2179 2.021457 GCACCCGTAATTATGCTGGTT 58.979 47.619 0.00 0.00 35.16 3.67
2002 2180 2.032924 GCACCCGTAATTATGCTGGTTC 59.967 50.000 0.00 0.00 35.16 3.62
2003 2181 3.541632 CACCCGTAATTATGCTGGTTCT 58.458 45.455 0.00 0.00 0.00 3.01
2004 2182 3.560068 CACCCGTAATTATGCTGGTTCTC 59.440 47.826 0.00 0.00 0.00 2.87
2005 2183 3.454812 ACCCGTAATTATGCTGGTTCTCT 59.545 43.478 0.00 0.00 0.00 3.10
2006 2184 4.080526 ACCCGTAATTATGCTGGTTCTCTT 60.081 41.667 0.00 0.00 0.00 2.85
2007 2185 4.881850 CCCGTAATTATGCTGGTTCTCTTT 59.118 41.667 0.00 0.00 0.00 2.52
2008 2186 5.357032 CCCGTAATTATGCTGGTTCTCTTTT 59.643 40.000 0.00 0.00 0.00 2.27
2009 2187 6.258160 CCGTAATTATGCTGGTTCTCTTTTG 58.742 40.000 0.00 0.00 0.00 2.44
2010 2188 6.258160 CGTAATTATGCTGGTTCTCTTTTGG 58.742 40.000 0.00 0.00 0.00 3.28
2011 2189 6.128007 CGTAATTATGCTGGTTCTCTTTTGGT 60.128 38.462 0.00 0.00 0.00 3.67
2012 2190 6.670695 AATTATGCTGGTTCTCTTTTGGTT 57.329 33.333 0.00 0.00 0.00 3.67
2013 2191 6.670695 ATTATGCTGGTTCTCTTTTGGTTT 57.329 33.333 0.00 0.00 0.00 3.27
2014 2192 6.478512 TTATGCTGGTTCTCTTTTGGTTTT 57.521 33.333 0.00 0.00 0.00 2.43
2015 2193 7.589958 TTATGCTGGTTCTCTTTTGGTTTTA 57.410 32.000 0.00 0.00 0.00 1.52
2016 2194 5.257082 TGCTGGTTCTCTTTTGGTTTTAC 57.743 39.130 0.00 0.00 0.00 2.01
2017 2195 4.201970 TGCTGGTTCTCTTTTGGTTTTACG 60.202 41.667 0.00 0.00 0.00 3.18
2018 2196 4.035909 GCTGGTTCTCTTTTGGTTTTACGA 59.964 41.667 0.00 0.00 0.00 3.43
2019 2197 5.278315 GCTGGTTCTCTTTTGGTTTTACGAT 60.278 40.000 0.00 0.00 0.00 3.73
2020 2198 6.067263 TGGTTCTCTTTTGGTTTTACGATG 57.933 37.500 0.00 0.00 0.00 3.84
2021 2199 5.823570 TGGTTCTCTTTTGGTTTTACGATGA 59.176 36.000 0.00 0.00 0.00 2.92
2022 2200 6.319152 TGGTTCTCTTTTGGTTTTACGATGAA 59.681 34.615 0.00 0.00 0.00 2.57
2023 2201 7.148052 TGGTTCTCTTTTGGTTTTACGATGAAA 60.148 33.333 0.00 0.00 0.00 2.69
2024 2202 7.865889 GGTTCTCTTTTGGTTTTACGATGAAAT 59.134 33.333 0.00 0.00 0.00 2.17
2025 2203 9.244799 GTTCTCTTTTGGTTTTACGATGAAATT 57.755 29.630 0.00 0.00 0.00 1.82
2026 2204 9.810545 TTCTCTTTTGGTTTTACGATGAAATTT 57.189 25.926 0.00 0.00 0.00 1.82
2027 2205 9.243637 TCTCTTTTGGTTTTACGATGAAATTTG 57.756 29.630 0.00 0.00 0.00 2.32
2028 2206 8.359060 TCTTTTGGTTTTACGATGAAATTTGG 57.641 30.769 0.00 0.00 0.00 3.28
2029 2207 7.982354 TCTTTTGGTTTTACGATGAAATTTGGT 59.018 29.630 0.00 0.00 0.00 3.67
2030 2208 9.250624 CTTTTGGTTTTACGATGAAATTTGGTA 57.749 29.630 0.00 0.00 0.00 3.25
2031 2209 8.804688 TTTGGTTTTACGATGAAATTTGGTAG 57.195 30.769 0.00 0.00 0.00 3.18
2032 2210 6.383415 TGGTTTTACGATGAAATTTGGTAGC 58.617 36.000 0.00 0.00 0.00 3.58
2033 2211 5.803461 GGTTTTACGATGAAATTTGGTAGCC 59.197 40.000 0.00 0.00 0.00 3.93
2034 2212 6.383415 GTTTTACGATGAAATTTGGTAGCCA 58.617 36.000 0.00 0.00 0.00 4.75
2035 2213 6.576662 TTTACGATGAAATTTGGTAGCCAA 57.423 33.333 0.00 0.00 42.29 4.52
2036 2214 6.767524 TTACGATGAAATTTGGTAGCCAAT 57.232 33.333 0.00 0.00 43.55 3.16
2037 2215 7.867305 TTACGATGAAATTTGGTAGCCAATA 57.133 32.000 0.00 0.00 43.55 1.90
2038 2216 6.959639 ACGATGAAATTTGGTAGCCAATAT 57.040 33.333 0.00 0.00 43.55 1.28
2039 2217 6.738114 ACGATGAAATTTGGTAGCCAATATG 58.262 36.000 0.00 0.00 43.55 1.78
2040 2218 6.321181 ACGATGAAATTTGGTAGCCAATATGT 59.679 34.615 0.00 0.00 43.55 2.29
2041 2219 7.500892 ACGATGAAATTTGGTAGCCAATATGTA 59.499 33.333 0.00 0.00 43.55 2.29
2042 2220 8.514594 CGATGAAATTTGGTAGCCAATATGTAT 58.485 33.333 0.00 0.00 43.55 2.29
2043 2221 9.630098 GATGAAATTTGGTAGCCAATATGTATG 57.370 33.333 0.00 0.00 43.55 2.39
2044 2222 7.432869 TGAAATTTGGTAGCCAATATGTATGC 58.567 34.615 0.00 0.00 43.55 3.14
2045 2223 6.975196 AATTTGGTAGCCAATATGTATGCA 57.025 33.333 1.09 0.00 43.55 3.96
2046 2224 7.543359 AATTTGGTAGCCAATATGTATGCAT 57.457 32.000 3.79 3.79 43.55 3.96
2047 2225 5.963176 TTGGTAGCCAATATGTATGCATG 57.037 39.130 10.16 0.00 38.75 4.06
2048 2226 4.984295 TGGTAGCCAATATGTATGCATGT 58.016 39.130 10.16 0.00 36.58 3.21
2049 2227 5.384336 TGGTAGCCAATATGTATGCATGTT 58.616 37.500 10.16 3.08 36.98 2.71
2050 2228 6.538263 TGGTAGCCAATATGTATGCATGTTA 58.462 36.000 10.16 0.00 35.19 2.41
2051 2229 6.654582 TGGTAGCCAATATGTATGCATGTTAG 59.345 38.462 10.16 0.51 35.19 2.34
2052 2230 6.094048 GGTAGCCAATATGTATGCATGTTAGG 59.906 42.308 10.16 10.79 35.19 2.69
2053 2231 5.012239 AGCCAATATGTATGCATGTTAGGG 58.988 41.667 10.16 6.00 35.19 3.53
2054 2232 4.380867 GCCAATATGTATGCATGTTAGGGC 60.381 45.833 10.16 14.98 37.75 5.19
2055 2233 4.766373 CCAATATGTATGCATGTTAGGGCA 59.234 41.667 10.16 0.00 45.23 5.36
2056 2234 5.106038 CCAATATGTATGCATGTTAGGGCAG 60.106 44.000 10.16 0.00 44.24 4.85
2057 2235 3.862877 ATGTATGCATGTTAGGGCAGA 57.137 42.857 10.16 0.00 44.24 4.26
2058 2236 3.862877 TGTATGCATGTTAGGGCAGAT 57.137 42.857 10.16 0.00 44.24 2.90
2059 2237 4.972751 TGTATGCATGTTAGGGCAGATA 57.027 40.909 10.16 0.00 44.24 1.98
2060 2238 4.641396 TGTATGCATGTTAGGGCAGATAC 58.359 43.478 10.16 0.00 44.24 2.24
2061 2239 2.238942 TGCATGTTAGGGCAGATACG 57.761 50.000 0.00 0.00 34.58 3.06
2062 2240 1.484653 TGCATGTTAGGGCAGATACGT 59.515 47.619 0.00 0.00 34.58 3.57
2063 2241 1.867233 GCATGTTAGGGCAGATACGTG 59.133 52.381 0.00 0.00 0.00 4.49
2064 2242 2.483013 GCATGTTAGGGCAGATACGTGA 60.483 50.000 0.00 0.00 30.88 4.35
2065 2243 2.953466 TGTTAGGGCAGATACGTGAC 57.047 50.000 0.00 0.00 0.00 3.67
2066 2244 2.453521 TGTTAGGGCAGATACGTGACT 58.546 47.619 0.00 0.00 0.00 3.41
2067 2245 2.165641 TGTTAGGGCAGATACGTGACTG 59.834 50.000 15.95 15.95 37.22 3.51
2068 2246 1.399714 TAGGGCAGATACGTGACTGG 58.600 55.000 19.77 7.16 35.05 4.00
2069 2247 0.614979 AGGGCAGATACGTGACTGGT 60.615 55.000 19.77 0.00 35.05 4.00
2070 2248 0.249398 GGGCAGATACGTGACTGGTT 59.751 55.000 19.77 0.00 35.05 3.67
2071 2249 1.479323 GGGCAGATACGTGACTGGTTA 59.521 52.381 19.77 0.00 35.05 2.85
2072 2250 2.537401 GGCAGATACGTGACTGGTTAC 58.463 52.381 19.77 7.76 35.05 2.50
2073 2251 2.537401 GCAGATACGTGACTGGTTACC 58.463 52.381 19.77 0.00 35.05 2.85
2074 2252 2.793933 CAGATACGTGACTGGTTACCG 58.206 52.381 13.50 0.00 0.00 4.02
2075 2253 2.163010 CAGATACGTGACTGGTTACCGT 59.837 50.000 13.50 0.00 0.00 4.83
2076 2254 2.163010 AGATACGTGACTGGTTACCGTG 59.837 50.000 0.00 0.00 0.00 4.94
2077 2255 0.597568 TACGTGACTGGTTACCGTGG 59.402 55.000 0.00 0.00 0.00 4.94
2078 2256 1.108727 ACGTGACTGGTTACCGTGGA 61.109 55.000 3.86 0.00 0.00 4.02
2079 2257 0.245539 CGTGACTGGTTACCGTGGAT 59.754 55.000 3.86 0.00 0.00 3.41
2080 2258 1.473677 CGTGACTGGTTACCGTGGATA 59.526 52.381 3.86 0.00 0.00 2.59
2081 2259 2.094597 CGTGACTGGTTACCGTGGATAA 60.095 50.000 3.86 0.00 0.00 1.75
2082 2260 3.256558 GTGACTGGTTACCGTGGATAAC 58.743 50.000 3.86 0.00 32.70 1.89
2083 2261 2.898612 TGACTGGTTACCGTGGATAACA 59.101 45.455 3.86 0.00 34.75 2.41
2084 2262 3.256558 GACTGGTTACCGTGGATAACAC 58.743 50.000 3.86 0.00 46.78 3.32
2096 2274 5.615925 GTGGATAACACTCCCTGTATCTT 57.384 43.478 0.00 0.00 46.72 2.40
2097 2275 5.360591 GTGGATAACACTCCCTGTATCTTG 58.639 45.833 0.00 0.00 46.72 3.02
2098 2276 5.030147 TGGATAACACTCCCTGTATCTTGT 58.970 41.667 0.00 0.00 34.12 3.16
2099 2277 6.097839 GTGGATAACACTCCCTGTATCTTGTA 59.902 42.308 0.00 0.00 46.72 2.41
2100 2278 6.844388 TGGATAACACTCCCTGTATCTTGTAT 59.156 38.462 0.00 0.00 34.12 2.29
2101 2279 7.347222 TGGATAACACTCCCTGTATCTTGTATT 59.653 37.037 0.00 0.00 34.12 1.89
2102 2280 7.657761 GGATAACACTCCCTGTATCTTGTATTG 59.342 40.741 0.00 0.00 30.51 1.90
2103 2281 6.374417 AACACTCCCTGTATCTTGTATTGT 57.626 37.500 0.00 0.00 30.51 2.71
2104 2282 7.490657 AACACTCCCTGTATCTTGTATTGTA 57.509 36.000 0.00 0.00 30.51 2.41
2105 2283 7.676683 ACACTCCCTGTATCTTGTATTGTAT 57.323 36.000 0.00 0.00 0.00 2.29
2106 2284 7.727181 ACACTCCCTGTATCTTGTATTGTATC 58.273 38.462 0.00 0.00 0.00 2.24
2107 2285 7.565398 ACACTCCCTGTATCTTGTATTGTATCT 59.435 37.037 0.00 0.00 0.00 1.98
2108 2286 8.424918 CACTCCCTGTATCTTGTATTGTATCTT 58.575 37.037 0.00 0.00 0.00 2.40
2109 2287 8.424918 ACTCCCTGTATCTTGTATTGTATCTTG 58.575 37.037 0.00 0.00 0.00 3.02
2110 2288 7.217200 TCCCTGTATCTTGTATTGTATCTTGC 58.783 38.462 0.00 0.00 0.00 4.01
2111 2289 7.071196 TCCCTGTATCTTGTATTGTATCTTGCT 59.929 37.037 0.00 0.00 0.00 3.91
2147 2325 5.948992 AGTTCATCAAAAGTAGGAAGCAC 57.051 39.130 0.00 0.00 0.00 4.40
2148 2326 5.625150 AGTTCATCAAAAGTAGGAAGCACT 58.375 37.500 0.00 0.00 0.00 4.40
2152 2330 6.240894 TCATCAAAAGTAGGAAGCACTTCAT 58.759 36.000 12.21 7.70 41.20 2.57
2165 2346 9.700831 AGGAAGCACTTCATATAATAAAAAGGT 57.299 29.630 12.21 0.00 41.20 3.50
2182 2363 5.878406 AAAGGTACATGAGATTCCGAGAT 57.122 39.130 0.00 0.00 0.00 2.75
2200 2381 3.606687 AGATCACCGAACAACCATTACC 58.393 45.455 0.00 0.00 0.00 2.85
2201 2382 2.932855 TCACCGAACAACCATTACCA 57.067 45.000 0.00 0.00 0.00 3.25
2222 2403 1.136984 GTCAGAACGAGTCGCCGAT 59.863 57.895 13.59 0.00 0.00 4.18
2246 2427 3.753434 CTGTCGCCTCTCGCCTGT 61.753 66.667 0.00 0.00 38.27 4.00
2252 2433 2.438614 CCTCTCGCCTGTCGGAGA 60.439 66.667 0.00 0.00 37.55 3.71
2280 2461 1.344438 ACCTTGTCGATGACAGCAAGA 59.656 47.619 11.55 0.00 43.69 3.02
2292 2473 3.123804 GACAGCAAGAAAGTCTTCGTGA 58.876 45.455 5.20 0.00 41.86 4.35
2295 2476 3.309682 CAGCAAGAAAGTCTTCGTGAACA 59.690 43.478 5.20 0.00 41.86 3.18
2299 2480 3.733337 AGAAAGTCTTCGTGAACATGCT 58.267 40.909 0.00 0.00 36.61 3.79
2309 2490 2.093973 CGTGAACATGCTCCTAAGGACT 60.094 50.000 0.00 0.00 0.00 3.85
2312 2493 4.160626 GTGAACATGCTCCTAAGGACTAGT 59.839 45.833 0.00 0.00 0.00 2.57
2317 2498 1.965318 GCTCCTAAGGACTAGTGCCCA 60.965 57.143 11.20 0.00 0.00 5.36
2318 2499 2.467880 CTCCTAAGGACTAGTGCCCAA 58.532 52.381 11.20 0.00 0.00 4.12
2335 2516 1.679680 CCAAGAGCCGCAATCATCATT 59.320 47.619 0.00 0.00 0.00 2.57
2347 2528 5.392919 CGCAATCATCATTGTTGAACCCTTA 60.393 40.000 1.73 0.00 41.51 2.69
2348 2529 6.397272 GCAATCATCATTGTTGAACCCTTAA 58.603 36.000 1.73 0.00 41.51 1.85
2385 2566 2.476619 CTGACACCAAATCTCGTCACAC 59.523 50.000 0.00 0.00 34.78 3.82
2418 2599 3.646715 CCTCACCGCCCCAAGGAA 61.647 66.667 0.00 0.00 33.47 3.36
2426 2607 2.503382 GCCCCAAGGAAACGGCAAA 61.503 57.895 0.00 0.00 41.25 3.68
2431 2612 2.412870 CCAAGGAAACGGCAAAAATCC 58.587 47.619 0.00 0.00 0.00 3.01
2437 2618 1.460273 AACGGCAAAAATCCACGCCT 61.460 50.000 0.00 0.00 42.59 5.52
2445 2626 1.195115 AAATCCACGCCTGAGCTCTA 58.805 50.000 16.19 0.24 36.60 2.43
2451 2632 1.082431 CGCCTGAGCTCTATCGACG 60.082 63.158 16.19 6.52 36.60 5.12
2508 2689 4.033019 CCCGAAAAACAAACTCGAAGAAC 58.967 43.478 0.00 0.00 34.09 3.01
2516 2697 0.531974 AACTCGAAGAACAAGCGCCA 60.532 50.000 2.29 0.00 34.09 5.69
2522 2703 0.537143 AAGAACAAGCGCCACCATCA 60.537 50.000 2.29 0.00 0.00 3.07
2526 2707 2.115052 AAGCGCCACCATCAACCA 59.885 55.556 2.29 0.00 0.00 3.67
2527 2708 1.304381 AAGCGCCACCATCAACCAT 60.304 52.632 2.29 0.00 0.00 3.55
2529 2710 0.748005 AGCGCCACCATCAACCATAC 60.748 55.000 2.29 0.00 0.00 2.39
2534 2715 0.393673 CACCATCAACCATACCGCCA 60.394 55.000 0.00 0.00 0.00 5.69
2535 2716 0.550914 ACCATCAACCATACCGCCAT 59.449 50.000 0.00 0.00 0.00 4.40
2538 2719 2.224523 CCATCAACCATACCGCCATACT 60.225 50.000 0.00 0.00 0.00 2.12
2541 2722 2.237643 TCAACCATACCGCCATACTTGT 59.762 45.455 0.00 0.00 0.00 3.16
2548 2729 0.249120 CCGCCATACTTGTGAGGACA 59.751 55.000 0.00 0.00 0.00 4.02
2549 2730 1.359848 CGCCATACTTGTGAGGACAC 58.640 55.000 0.00 0.00 46.09 3.67
2563 2744 2.889045 GAGGACACAAAAACCCTAACCC 59.111 50.000 0.00 0.00 0.00 4.11
2564 2745 1.610038 GGACACAAAAACCCTAACCCG 59.390 52.381 0.00 0.00 0.00 5.28
2575 2756 5.509832 AACCCTAACCCGAACTTCTAAAT 57.490 39.130 0.00 0.00 0.00 1.40
2578 2759 4.196971 CCTAACCCGAACTTCTAAATGGG 58.803 47.826 0.00 0.00 42.50 4.00
2603 2784 1.596934 GCACCGAGATTCACCTCCA 59.403 57.895 0.00 0.00 0.00 3.86
2608 2789 1.153349 GAGATTCACCTCCACGCCC 60.153 63.158 0.00 0.00 0.00 6.13
2612 2793 2.764637 ATTCACCTCCACGCCCCAAC 62.765 60.000 0.00 0.00 0.00 3.77
2614 2795 3.953775 ACCTCCACGCCCCAACTG 61.954 66.667 0.00 0.00 0.00 3.16
2645 2827 2.472909 GCAAAGGGGAGGCGAATCG 61.473 63.158 0.00 0.00 0.00 3.34
2647 2829 0.392461 CAAAGGGGAGGCGAATCGAA 60.392 55.000 6.91 0.00 0.00 3.71
2651 2833 2.180862 GGGAGGCGAATCGAAAGGC 61.181 63.158 6.91 0.00 0.00 4.35
2652 2834 1.153349 GGAGGCGAATCGAAAGGCT 60.153 57.895 6.91 12.60 43.66 4.58
2653 2835 4.522971 AGGCGAATCGAAAGGCTC 57.477 55.556 6.91 0.00 35.87 4.70
2670 2852 3.616935 TCGATGGCGAAGTTACGAG 57.383 52.632 0.00 0.00 44.78 4.18
2671 2853 1.089112 TCGATGGCGAAGTTACGAGA 58.911 50.000 0.00 0.00 44.78 4.04
2672 2854 1.674441 TCGATGGCGAAGTTACGAGAT 59.326 47.619 0.00 0.00 44.78 2.75
2673 2855 2.098607 TCGATGGCGAAGTTACGAGATT 59.901 45.455 0.00 0.00 44.78 2.40
2674 2856 2.216488 CGATGGCGAAGTTACGAGATTG 59.784 50.000 0.00 0.00 40.82 2.67
2675 2857 1.355971 TGGCGAAGTTACGAGATTGC 58.644 50.000 0.00 0.00 35.09 3.56
2676 2858 0.297820 GGCGAAGTTACGAGATTGCG 59.702 55.000 0.00 0.00 35.09 4.85
2677 2859 1.265568 GCGAAGTTACGAGATTGCGA 58.734 50.000 0.00 0.00 35.09 5.10
2678 2860 1.852895 GCGAAGTTACGAGATTGCGAT 59.147 47.619 0.00 0.00 35.09 4.58
2679 2861 2.097829 GCGAAGTTACGAGATTGCGATC 60.098 50.000 5.74 5.74 35.09 3.69
2680 2862 2.468040 CGAAGTTACGAGATTGCGATCC 59.532 50.000 10.50 1.69 32.44 3.36
2681 2863 2.121116 AGTTACGAGATTGCGATCCG 57.879 50.000 17.95 17.95 34.34 4.18
2682 2864 1.404391 AGTTACGAGATTGCGATCCGT 59.596 47.619 24.44 24.44 40.14 4.69
2683 2865 2.615447 AGTTACGAGATTGCGATCCGTA 59.385 45.455 22.97 22.97 38.85 4.02
2684 2866 3.065786 AGTTACGAGATTGCGATCCGTAA 59.934 43.478 28.17 28.17 42.39 3.18
2685 2867 2.795175 ACGAGATTGCGATCCGTAAT 57.205 45.000 21.63 2.56 43.92 1.89
2686 2868 3.909776 ACGAGATTGCGATCCGTAATA 57.090 42.857 21.63 0.00 41.64 0.98
2687 2869 4.436242 ACGAGATTGCGATCCGTAATAT 57.564 40.909 21.63 0.26 41.64 1.28
2688 2870 4.806330 ACGAGATTGCGATCCGTAATATT 58.194 39.130 21.63 0.00 41.64 1.28
2689 2871 4.621460 ACGAGATTGCGATCCGTAATATTG 59.379 41.667 21.63 9.38 41.64 1.90
2690 2872 4.490959 CGAGATTGCGATCCGTAATATTGC 60.491 45.833 10.50 0.00 41.64 3.56
2691 2873 4.314961 AGATTGCGATCCGTAATATTGCA 58.685 39.130 10.50 0.00 41.64 4.08
2692 2874 4.937620 AGATTGCGATCCGTAATATTGCAT 59.062 37.500 10.50 0.00 41.64 3.96
2693 2875 6.106003 AGATTGCGATCCGTAATATTGCATA 58.894 36.000 10.50 0.00 41.64 3.14
2694 2876 5.524511 TTGCGATCCGTAATATTGCATAC 57.475 39.130 4.37 0.00 42.04 2.39
2695 2877 3.610677 TGCGATCCGTAATATTGCATACG 59.389 43.478 10.00 10.00 43.31 3.06
2709 2891 6.693315 ATTGCATACGGTAATAAAGTTGCT 57.307 33.333 8.55 0.00 29.31 3.91
2710 2892 7.795482 ATTGCATACGGTAATAAAGTTGCTA 57.205 32.000 8.55 2.83 29.31 3.49
2711 2893 6.592798 TGCATACGGTAATAAAGTTGCTAC 57.407 37.500 8.55 0.00 0.00 3.58
2712 2894 6.107343 TGCATACGGTAATAAAGTTGCTACA 58.893 36.000 0.13 0.00 0.00 2.74
2713 2895 6.764085 TGCATACGGTAATAAAGTTGCTACAT 59.236 34.615 0.13 0.00 0.00 2.29
2714 2896 7.927092 TGCATACGGTAATAAAGTTGCTACATA 59.073 33.333 0.13 0.00 0.00 2.29
2715 2897 8.932791 GCATACGGTAATAAAGTTGCTACATAT 58.067 33.333 0.13 0.00 0.00 1.78
2719 2901 9.386010 ACGGTAATAAAGTTGCTACATATTTGA 57.614 29.630 12.09 0.00 0.00 2.69
2726 2908 7.744087 AAGTTGCTACATATTTGAACTGTCA 57.256 32.000 0.13 0.00 0.00 3.58
2727 2909 7.133891 AGTTGCTACATATTTGAACTGTCAC 57.866 36.000 0.13 0.00 31.90 3.67
2728 2910 6.710295 AGTTGCTACATATTTGAACTGTCACA 59.290 34.615 0.13 0.00 31.90 3.58
2729 2911 7.228507 AGTTGCTACATATTTGAACTGTCACAA 59.771 33.333 0.13 0.00 31.90 3.33
2730 2912 7.686438 TGCTACATATTTGAACTGTCACAAT 57.314 32.000 0.00 0.00 31.90 2.71
2731 2913 7.751732 TGCTACATATTTGAACTGTCACAATC 58.248 34.615 0.00 0.00 31.90 2.67
2732 2914 7.390162 TGCTACATATTTGAACTGTCACAATCA 59.610 33.333 0.00 0.00 31.90 2.57
2733 2915 8.236586 GCTACATATTTGAACTGTCACAATCAA 58.763 33.333 2.29 2.29 31.90 2.57
2734 2916 9.546909 CTACATATTTGAACTGTCACAATCAAC 57.453 33.333 5.40 0.00 31.90 3.18
2735 2917 7.939782 ACATATTTGAACTGTCACAATCAACA 58.060 30.769 5.40 0.00 31.90 3.33
2736 2918 8.412456 ACATATTTGAACTGTCACAATCAACAA 58.588 29.630 5.40 0.00 31.90 2.83
2737 2919 9.247126 CATATTTGAACTGTCACAATCAACAAA 57.753 29.630 5.40 0.00 31.90 2.83
2738 2920 6.942886 TTTGAACTGTCACAATCAACAAAC 57.057 33.333 5.40 0.00 31.90 2.93
2739 2921 5.635417 TGAACTGTCACAATCAACAAACA 57.365 34.783 0.00 0.00 0.00 2.83
2740 2922 6.018589 TGAACTGTCACAATCAACAAACAA 57.981 33.333 0.00 0.00 0.00 2.83
2741 2923 6.629128 TGAACTGTCACAATCAACAAACAAT 58.371 32.000 0.00 0.00 0.00 2.71
2742 2924 6.530887 TGAACTGTCACAATCAACAAACAATG 59.469 34.615 0.00 0.00 0.00 2.82
2743 2925 4.805192 ACTGTCACAATCAACAAACAATGC 59.195 37.500 0.00 0.00 0.00 3.56
2744 2926 4.118410 TGTCACAATCAACAAACAATGCC 58.882 39.130 0.00 0.00 0.00 4.40
2745 2927 3.494251 GTCACAATCAACAAACAATGCCC 59.506 43.478 0.00 0.00 0.00 5.36
2746 2928 2.807392 CACAATCAACAAACAATGCCCC 59.193 45.455 0.00 0.00 0.00 5.80
2747 2929 2.224499 ACAATCAACAAACAATGCCCCC 60.224 45.455 0.00 0.00 0.00 5.40
2748 2930 1.727062 ATCAACAAACAATGCCCCCA 58.273 45.000 0.00 0.00 0.00 4.96
2749 2931 1.500474 TCAACAAACAATGCCCCCAA 58.500 45.000 0.00 0.00 0.00 4.12
2750 2932 1.839994 TCAACAAACAATGCCCCCAAA 59.160 42.857 0.00 0.00 0.00 3.28
2751 2933 2.239654 TCAACAAACAATGCCCCCAAAA 59.760 40.909 0.00 0.00 0.00 2.44
2752 2934 3.019564 CAACAAACAATGCCCCCAAAAA 58.980 40.909 0.00 0.00 0.00 1.94
2790 2972 8.597662 AAATCAAACATGAGAAAAATCACTGG 57.402 30.769 0.00 0.00 30.46 4.00
2791 2973 5.531634 TCAAACATGAGAAAAATCACTGGC 58.468 37.500 0.00 0.00 30.46 4.85
2792 2974 4.525912 AACATGAGAAAAATCACTGGCC 57.474 40.909 0.00 0.00 30.46 5.36
2793 2975 3.499338 ACATGAGAAAAATCACTGGCCA 58.501 40.909 4.71 4.71 30.46 5.36
2794 2976 3.896888 ACATGAGAAAAATCACTGGCCAA 59.103 39.130 7.01 0.00 30.46 4.52
2795 2977 4.021719 ACATGAGAAAAATCACTGGCCAAG 60.022 41.667 7.01 1.99 30.46 3.61
2796 2978 3.831323 TGAGAAAAATCACTGGCCAAGA 58.169 40.909 7.01 8.66 0.00 3.02
2797 2979 4.214310 TGAGAAAAATCACTGGCCAAGAA 58.786 39.130 7.01 0.00 0.00 2.52
2798 2980 4.648762 TGAGAAAAATCACTGGCCAAGAAA 59.351 37.500 7.01 0.00 0.00 2.52
2799 2981 5.128499 TGAGAAAAATCACTGGCCAAGAAAA 59.872 36.000 7.01 0.00 0.00 2.29
2800 2982 6.178607 AGAAAAATCACTGGCCAAGAAAAT 57.821 33.333 7.01 0.00 0.00 1.82
2801 2983 5.993441 AGAAAAATCACTGGCCAAGAAAATG 59.007 36.000 7.01 0.00 0.00 2.32
2802 2984 4.961438 AAATCACTGGCCAAGAAAATGT 57.039 36.364 7.01 0.00 0.00 2.71
2803 2985 3.947910 ATCACTGGCCAAGAAAATGTG 57.052 42.857 7.01 9.95 0.00 3.21
2804 2986 1.340889 TCACTGGCCAAGAAAATGTGC 59.659 47.619 7.01 0.00 0.00 4.57
2805 2987 0.681175 ACTGGCCAAGAAAATGTGCC 59.319 50.000 7.01 0.00 42.49 5.01
2806 2988 0.971386 CTGGCCAAGAAAATGTGCCT 59.029 50.000 7.01 0.00 42.62 4.75
2807 2989 2.170166 CTGGCCAAGAAAATGTGCCTA 58.830 47.619 7.01 0.00 42.62 3.93
2808 2990 2.562298 CTGGCCAAGAAAATGTGCCTAA 59.438 45.455 7.01 0.00 42.62 2.69
2809 2991 2.562298 TGGCCAAGAAAATGTGCCTAAG 59.438 45.455 0.61 0.00 42.62 2.18
2810 2992 2.825532 GGCCAAGAAAATGTGCCTAAGA 59.174 45.455 0.00 0.00 39.05 2.10
2811 2993 3.258123 GGCCAAGAAAATGTGCCTAAGAA 59.742 43.478 0.00 0.00 39.05 2.52
2812 2994 4.488879 GCCAAGAAAATGTGCCTAAGAAG 58.511 43.478 0.00 0.00 0.00 2.85
2813 2995 4.021981 GCCAAGAAAATGTGCCTAAGAAGT 60.022 41.667 0.00 0.00 0.00 3.01
2814 2996 5.703876 CCAAGAAAATGTGCCTAAGAAGTC 58.296 41.667 0.00 0.00 0.00 3.01
2815 2997 5.335976 CCAAGAAAATGTGCCTAAGAAGTCC 60.336 44.000 0.00 0.00 0.00 3.85
2816 2998 4.985538 AGAAAATGTGCCTAAGAAGTCCA 58.014 39.130 0.00 0.00 0.00 4.02
2817 2999 5.385198 AGAAAATGTGCCTAAGAAGTCCAA 58.615 37.500 0.00 0.00 0.00 3.53
2818 3000 5.833131 AGAAAATGTGCCTAAGAAGTCCAAA 59.167 36.000 0.00 0.00 0.00 3.28
2819 3001 6.323739 AGAAAATGTGCCTAAGAAGTCCAAAA 59.676 34.615 0.00 0.00 0.00 2.44
2820 3002 6.670695 AAATGTGCCTAAGAAGTCCAAAAT 57.329 33.333 0.00 0.00 0.00 1.82
2821 3003 7.775053 AAATGTGCCTAAGAAGTCCAAAATA 57.225 32.000 0.00 0.00 0.00 1.40
2822 3004 7.961326 AATGTGCCTAAGAAGTCCAAAATAT 57.039 32.000 0.00 0.00 0.00 1.28
2823 3005 6.757897 TGTGCCTAAGAAGTCCAAAATATG 57.242 37.500 0.00 0.00 0.00 1.78
2824 3006 6.480763 TGTGCCTAAGAAGTCCAAAATATGA 58.519 36.000 0.00 0.00 0.00 2.15
2825 3007 6.945435 TGTGCCTAAGAAGTCCAAAATATGAA 59.055 34.615 0.00 0.00 0.00 2.57
2826 3008 7.615365 TGTGCCTAAGAAGTCCAAAATATGAAT 59.385 33.333 0.00 0.00 0.00 2.57
2827 3009 8.131731 GTGCCTAAGAAGTCCAAAATATGAATC 58.868 37.037 0.00 0.00 0.00 2.52
2828 3010 8.055181 TGCCTAAGAAGTCCAAAATATGAATCT 58.945 33.333 0.00 0.00 0.00 2.40
2829 3011 8.348507 GCCTAAGAAGTCCAAAATATGAATCTG 58.651 37.037 0.00 0.00 0.00 2.90
2830 3012 8.844244 CCTAAGAAGTCCAAAATATGAATCTGG 58.156 37.037 0.00 0.00 0.00 3.86
2831 3013 9.401058 CTAAGAAGTCCAAAATATGAATCTGGT 57.599 33.333 0.00 0.00 0.00 4.00
2832 3014 7.872113 AGAAGTCCAAAATATGAATCTGGTC 57.128 36.000 0.00 0.00 0.00 4.02
2833 3015 6.830838 AGAAGTCCAAAATATGAATCTGGTCC 59.169 38.462 0.00 0.00 0.00 4.46
2834 3016 6.078456 AGTCCAAAATATGAATCTGGTCCA 57.922 37.500 0.00 0.00 0.00 4.02
2835 3017 6.493166 AGTCCAAAATATGAATCTGGTCCAA 58.507 36.000 0.00 0.00 0.00 3.53
2836 3018 6.604795 AGTCCAAAATATGAATCTGGTCCAAG 59.395 38.462 0.00 0.00 0.00 3.61
2837 3019 6.603201 GTCCAAAATATGAATCTGGTCCAAGA 59.397 38.462 0.00 0.00 0.00 3.02
2838 3020 7.122650 GTCCAAAATATGAATCTGGTCCAAGAA 59.877 37.037 0.00 0.00 0.00 2.52
2839 3021 7.122650 TCCAAAATATGAATCTGGTCCAAGAAC 59.877 37.037 0.00 0.00 0.00 3.01
2840 3022 7.123247 CCAAAATATGAATCTGGTCCAAGAACT 59.877 37.037 0.00 0.00 0.00 3.01
2841 3023 8.526147 CAAAATATGAATCTGGTCCAAGAACTT 58.474 33.333 0.00 0.00 0.00 2.66
2842 3024 9.753674 AAAATATGAATCTGGTCCAAGAACTTA 57.246 29.630 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.379977 CTACGGAGCTCCTGGGTCA 60.380 63.158 29.73 7.77 43.58 4.02
130 131 0.764369 CCCTATCCAGCAGCCCTACA 60.764 60.000 0.00 0.00 0.00 2.74
577 707 8.628630 TTTGTTTAACATGGTATCAGATGACA 57.371 30.769 0.00 0.00 0.00 3.58
630 766 0.687920 TGACAGCCGTACCCATCAAA 59.312 50.000 0.00 0.00 0.00 2.69
729 865 3.154584 GACGTTGGTGTCCGGGTGA 62.155 63.158 0.00 0.00 32.61 4.02
891 1027 0.178955 TGAACCGGACCACCTACAGA 60.179 55.000 9.46 0.00 0.00 3.41
895 1031 1.531365 ACGTGAACCGGACCACCTA 60.531 57.895 9.46 0.00 42.24 3.08
1109 1251 0.824759 GGTCTCTGGCGTGAACCTAT 59.175 55.000 0.00 0.00 0.00 2.57
1110 1252 0.541063 TGGTCTCTGGCGTGAACCTA 60.541 55.000 0.00 0.00 0.00 3.08
1122 1264 1.216990 GGGGGTTGATCATGGTCTCT 58.783 55.000 7.64 0.00 0.00 3.10
1452 1630 1.153489 CCTGTCCCTGCTCATCACG 60.153 63.158 0.00 0.00 0.00 4.35
1530 1708 3.000819 TTCACCGCCTCCGTCCAT 61.001 61.111 0.00 0.00 0.00 3.41
1802 1980 3.003173 CCTCGAACCCCAGGCTCA 61.003 66.667 0.00 0.00 0.00 4.26
1830 2008 2.962569 CGGGCTCACAGACGAGAA 59.037 61.111 0.00 0.00 34.79 2.87
1845 2023 5.331902 CCAAACACAAAACATCTATAGCGG 58.668 41.667 0.00 0.00 0.00 5.52
1849 2027 7.459795 TGATGCCAAACACAAAACATCTATA 57.540 32.000 0.00 0.00 35.93 1.31
1850 2028 6.343716 TGATGCCAAACACAAAACATCTAT 57.656 33.333 0.00 0.00 35.93 1.98
1851 2029 5.781210 TGATGCCAAACACAAAACATCTA 57.219 34.783 0.00 0.00 35.93 1.98
1852 2030 4.669206 TGATGCCAAACACAAAACATCT 57.331 36.364 0.00 0.00 35.93 2.90
1853 2031 4.317980 CGTTGATGCCAAACACAAAACATC 60.318 41.667 0.00 0.00 35.58 3.06
1854 2032 3.555139 CGTTGATGCCAAACACAAAACAT 59.445 39.130 0.00 0.00 33.49 2.71
1855 2033 2.926200 CGTTGATGCCAAACACAAAACA 59.074 40.909 0.00 0.00 33.49 2.83
1856 2034 3.182967 TCGTTGATGCCAAACACAAAAC 58.817 40.909 0.00 0.00 33.49 2.43
1857 2035 3.510388 TCGTTGATGCCAAACACAAAA 57.490 38.095 0.00 0.00 33.49 2.44
1858 2036 3.379240 CATCGTTGATGCCAAACACAAA 58.621 40.909 0.00 0.00 33.17 2.83
1859 2037 3.010624 CATCGTTGATGCCAAACACAA 57.989 42.857 0.00 0.00 33.17 3.33
1860 2038 2.702898 CATCGTTGATGCCAAACACA 57.297 45.000 0.00 0.00 33.17 3.72
1869 2047 2.028420 TCTTCCCTGCATCGTTGATG 57.972 50.000 2.45 2.45 42.37 3.07
1870 2048 3.805108 GCTATCTTCCCTGCATCGTTGAT 60.805 47.826 0.00 0.00 0.00 2.57
1871 2049 2.483714 GCTATCTTCCCTGCATCGTTGA 60.484 50.000 0.00 0.00 0.00 3.18
1872 2050 1.869767 GCTATCTTCCCTGCATCGTTG 59.130 52.381 0.00 0.00 0.00 4.10
1873 2051 1.486310 TGCTATCTTCCCTGCATCGTT 59.514 47.619 0.00 0.00 0.00 3.85
1874 2052 1.123077 TGCTATCTTCCCTGCATCGT 58.877 50.000 0.00 0.00 0.00 3.73
1875 2053 2.074576 CATGCTATCTTCCCTGCATCG 58.925 52.381 0.00 0.00 43.24 3.84
1876 2054 1.811359 GCATGCTATCTTCCCTGCATC 59.189 52.381 11.37 0.00 43.24 3.91
1877 2055 1.881072 CGCATGCTATCTTCCCTGCAT 60.881 52.381 17.13 0.00 45.57 3.96
1878 2056 0.533531 CGCATGCTATCTTCCCTGCA 60.534 55.000 17.13 0.00 39.83 4.41
1879 2057 0.250038 TCGCATGCTATCTTCCCTGC 60.250 55.000 17.13 0.00 0.00 4.85
1880 2058 2.141517 CTTCGCATGCTATCTTCCCTG 58.858 52.381 17.13 0.00 0.00 4.45
1881 2059 1.542108 GCTTCGCATGCTATCTTCCCT 60.542 52.381 17.13 0.00 0.00 4.20
1882 2060 0.871057 GCTTCGCATGCTATCTTCCC 59.129 55.000 17.13 0.00 0.00 3.97
1883 2061 1.797635 GAGCTTCGCATGCTATCTTCC 59.202 52.381 17.13 0.00 41.30 3.46
1884 2062 2.477825 TGAGCTTCGCATGCTATCTTC 58.522 47.619 17.13 8.58 41.30 2.87
1885 2063 2.609427 TGAGCTTCGCATGCTATCTT 57.391 45.000 17.13 0.00 41.30 2.40
1886 2064 2.208431 GTTGAGCTTCGCATGCTATCT 58.792 47.619 17.13 7.21 41.30 1.98
1887 2065 1.262683 GGTTGAGCTTCGCATGCTATC 59.737 52.381 17.13 6.81 41.30 2.08
1888 2066 1.134280 AGGTTGAGCTTCGCATGCTAT 60.134 47.619 17.13 0.00 41.30 2.97
1889 2067 0.250234 AGGTTGAGCTTCGCATGCTA 59.750 50.000 17.13 0.72 41.30 3.49
1890 2068 1.002868 AGGTTGAGCTTCGCATGCT 60.003 52.632 17.13 0.00 44.24 3.79
1891 2069 1.427020 GAGGTTGAGCTTCGCATGC 59.573 57.895 7.91 7.91 0.00 4.06
1892 2070 0.737367 TCGAGGTTGAGCTTCGCATG 60.737 55.000 0.00 0.00 44.87 4.06
1893 2071 0.037326 TTCGAGGTTGAGCTTCGCAT 60.037 50.000 0.00 0.00 44.87 4.73
1894 2072 0.249699 TTTCGAGGTTGAGCTTCGCA 60.250 50.000 0.00 0.00 44.87 5.10
1895 2073 0.865769 TTTTCGAGGTTGAGCTTCGC 59.134 50.000 0.00 0.00 44.87 4.70
1896 2074 2.286833 TGTTTTTCGAGGTTGAGCTTCG 59.713 45.455 0.00 0.00 46.32 3.79
1897 2075 3.963383 TGTTTTTCGAGGTTGAGCTTC 57.037 42.857 0.00 0.00 0.00 3.86
1898 2076 4.083271 GCTATGTTTTTCGAGGTTGAGCTT 60.083 41.667 0.00 0.00 0.00 3.74
1899 2077 3.437049 GCTATGTTTTTCGAGGTTGAGCT 59.563 43.478 0.00 0.00 0.00 4.09
1900 2078 3.437049 AGCTATGTTTTTCGAGGTTGAGC 59.563 43.478 0.00 0.00 0.00 4.26
1901 2079 5.613358 AAGCTATGTTTTTCGAGGTTGAG 57.387 39.130 0.00 0.00 0.00 3.02
1902 2080 4.151689 CGAAGCTATGTTTTTCGAGGTTGA 59.848 41.667 0.00 0.00 44.64 3.18
1903 2081 4.151689 TCGAAGCTATGTTTTTCGAGGTTG 59.848 41.667 4.64 0.00 45.22 3.77
1904 2082 4.312443 TCGAAGCTATGTTTTTCGAGGTT 58.688 39.130 4.64 0.00 45.22 3.50
1905 2083 3.921677 TCGAAGCTATGTTTTTCGAGGT 58.078 40.909 4.64 0.00 45.22 3.85
1909 2087 4.084013 ACAACCTCGAAGCTATGTTTTTCG 60.084 41.667 0.00 0.00 43.58 3.46
1910 2088 5.358298 ACAACCTCGAAGCTATGTTTTTC 57.642 39.130 0.00 0.00 0.00 2.29
1911 2089 5.106673 GCTACAACCTCGAAGCTATGTTTTT 60.107 40.000 0.00 0.00 32.18 1.94
1912 2090 4.392138 GCTACAACCTCGAAGCTATGTTTT 59.608 41.667 0.00 0.00 32.18 2.43
1913 2091 3.933332 GCTACAACCTCGAAGCTATGTTT 59.067 43.478 0.00 0.00 32.18 2.83
1914 2092 3.195825 AGCTACAACCTCGAAGCTATGTT 59.804 43.478 5.26 0.00 43.29 2.71
1915 2093 2.761208 AGCTACAACCTCGAAGCTATGT 59.239 45.455 5.26 0.00 43.29 2.29
1916 2094 3.444703 AGCTACAACCTCGAAGCTATG 57.555 47.619 5.26 0.00 43.29 2.23
1919 2097 2.101582 CCATAGCTACAACCTCGAAGCT 59.898 50.000 11.48 11.48 46.58 3.74
1920 2098 2.474816 CCATAGCTACAACCTCGAAGC 58.525 52.381 0.00 0.00 35.16 3.86
1921 2099 2.474816 GCCATAGCTACAACCTCGAAG 58.525 52.381 0.00 0.00 35.50 3.79
1922 2100 1.202371 CGCCATAGCTACAACCTCGAA 60.202 52.381 0.00 0.00 36.60 3.71
1923 2101 0.384309 CGCCATAGCTACAACCTCGA 59.616 55.000 0.00 0.00 36.60 4.04
1924 2102 0.384309 TCGCCATAGCTACAACCTCG 59.616 55.000 0.00 0.00 36.60 4.63
1925 2103 1.870167 GCTCGCCATAGCTACAACCTC 60.870 57.143 0.00 0.00 39.50 3.85
1926 2104 0.105039 GCTCGCCATAGCTACAACCT 59.895 55.000 0.00 0.00 39.50 3.50
1927 2105 2.606275 GCTCGCCATAGCTACAACC 58.394 57.895 0.00 0.00 39.50 3.77
1934 2112 1.354506 CAAGCAAGCTCGCCATAGC 59.645 57.895 0.00 0.00 43.11 2.97
1935 2113 1.939974 TACAAGCAAGCTCGCCATAG 58.060 50.000 0.00 0.00 0.00 2.23
1936 2114 2.006888 GTTACAAGCAAGCTCGCCATA 58.993 47.619 0.00 0.00 0.00 2.74
1937 2115 0.804989 GTTACAAGCAAGCTCGCCAT 59.195 50.000 0.00 0.00 0.00 4.40
1938 2116 0.533978 TGTTACAAGCAAGCTCGCCA 60.534 50.000 0.00 0.00 0.00 5.69
1939 2117 0.804989 ATGTTACAAGCAAGCTCGCC 59.195 50.000 0.00 0.00 0.00 5.54
1940 2118 1.464608 TGATGTTACAAGCAAGCTCGC 59.535 47.619 0.00 0.00 0.00 5.03
1941 2119 3.811722 TTGATGTTACAAGCAAGCTCG 57.188 42.857 0.00 0.00 0.00 5.03
1942 2120 8.519492 TTATTTTTGATGTTACAAGCAAGCTC 57.481 30.769 0.00 0.00 0.00 4.09
1943 2121 8.764287 GTTTATTTTTGATGTTACAAGCAAGCT 58.236 29.630 0.00 0.00 0.00 3.74
1944 2122 8.764287 AGTTTATTTTTGATGTTACAAGCAAGC 58.236 29.630 0.00 0.00 0.00 4.01
1946 2124 8.547069 GCAGTTTATTTTTGATGTTACAAGCAA 58.453 29.630 0.00 0.00 0.00 3.91
1947 2125 7.708322 TGCAGTTTATTTTTGATGTTACAAGCA 59.292 29.630 0.00 0.00 0.00 3.91
1948 2126 8.003784 GTGCAGTTTATTTTTGATGTTACAAGC 58.996 33.333 0.00 0.00 0.00 4.01
1949 2127 8.207252 CGTGCAGTTTATTTTTGATGTTACAAG 58.793 33.333 0.00 0.00 0.00 3.16
1950 2128 7.915923 TCGTGCAGTTTATTTTTGATGTTACAA 59.084 29.630 0.00 0.00 0.00 2.41
1951 2129 7.377397 GTCGTGCAGTTTATTTTTGATGTTACA 59.623 33.333 0.00 0.00 0.00 2.41
1952 2130 7.377397 TGTCGTGCAGTTTATTTTTGATGTTAC 59.623 33.333 0.00 0.00 0.00 2.50
1953 2131 7.418408 TGTCGTGCAGTTTATTTTTGATGTTA 58.582 30.769 0.00 0.00 0.00 2.41
1954 2132 6.269315 TGTCGTGCAGTTTATTTTTGATGTT 58.731 32.000 0.00 0.00 0.00 2.71
1955 2133 5.826586 TGTCGTGCAGTTTATTTTTGATGT 58.173 33.333 0.00 0.00 0.00 3.06
1956 2134 6.932901 ATGTCGTGCAGTTTATTTTTGATG 57.067 33.333 0.00 0.00 0.00 3.07
1957 2135 6.747280 GCTATGTCGTGCAGTTTATTTTTGAT 59.253 34.615 0.00 0.00 0.00 2.57
1958 2136 6.083630 GCTATGTCGTGCAGTTTATTTTTGA 58.916 36.000 0.00 0.00 0.00 2.69
1959 2137 5.855925 TGCTATGTCGTGCAGTTTATTTTTG 59.144 36.000 0.00 0.00 34.84 2.44
1960 2138 5.856455 GTGCTATGTCGTGCAGTTTATTTTT 59.144 36.000 0.00 0.00 40.06 1.94
1961 2139 5.390613 GTGCTATGTCGTGCAGTTTATTTT 58.609 37.500 0.00 0.00 40.06 1.82
1962 2140 4.142687 GGTGCTATGTCGTGCAGTTTATTT 60.143 41.667 0.00 0.00 40.06 1.40
1963 2141 3.374058 GGTGCTATGTCGTGCAGTTTATT 59.626 43.478 0.00 0.00 40.06 1.40
1964 2142 2.936498 GGTGCTATGTCGTGCAGTTTAT 59.064 45.455 0.00 0.00 40.06 1.40
1965 2143 2.343101 GGTGCTATGTCGTGCAGTTTA 58.657 47.619 0.00 0.00 40.06 2.01
1966 2144 1.156736 GGTGCTATGTCGTGCAGTTT 58.843 50.000 0.00 0.00 40.06 2.66
1967 2145 0.673644 GGGTGCTATGTCGTGCAGTT 60.674 55.000 0.00 0.00 40.06 3.16
1968 2146 1.079127 GGGTGCTATGTCGTGCAGT 60.079 57.895 0.00 0.00 40.06 4.40
1969 2147 2.167219 CGGGTGCTATGTCGTGCAG 61.167 63.158 0.00 0.00 40.06 4.41
1970 2148 1.596895 TACGGGTGCTATGTCGTGCA 61.597 55.000 0.00 0.00 37.10 4.57
1971 2149 0.458889 TTACGGGTGCTATGTCGTGC 60.459 55.000 0.00 0.00 37.10 5.34
1972 2150 2.218953 ATTACGGGTGCTATGTCGTG 57.781 50.000 0.00 0.00 37.10 4.35
1973 2151 2.973694 AATTACGGGTGCTATGTCGT 57.026 45.000 0.00 0.00 39.30 4.34
1974 2152 3.122948 GCATAATTACGGGTGCTATGTCG 59.877 47.826 2.23 0.00 34.85 4.35
1975 2153 4.152402 CAGCATAATTACGGGTGCTATGTC 59.848 45.833 10.22 0.00 45.42 3.06
1976 2154 4.065088 CAGCATAATTACGGGTGCTATGT 58.935 43.478 10.22 0.00 45.42 2.29
1977 2155 3.436704 CCAGCATAATTACGGGTGCTATG 59.563 47.826 10.22 2.26 45.42 2.23
1978 2156 3.072476 ACCAGCATAATTACGGGTGCTAT 59.928 43.478 10.22 1.38 45.42 2.97
1979 2157 2.436542 ACCAGCATAATTACGGGTGCTA 59.563 45.455 10.22 0.00 45.42 3.49
1981 2159 1.675552 ACCAGCATAATTACGGGTGC 58.324 50.000 10.96 6.65 32.83 5.01
1982 2160 3.541632 AGAACCAGCATAATTACGGGTG 58.458 45.455 9.91 9.91 34.42 4.61
1983 2161 3.454812 AGAGAACCAGCATAATTACGGGT 59.545 43.478 0.00 0.00 35.77 5.28
1984 2162 4.073293 AGAGAACCAGCATAATTACGGG 57.927 45.455 0.00 0.00 0.00 5.28
1985 2163 6.258160 CAAAAGAGAACCAGCATAATTACGG 58.742 40.000 0.00 0.00 0.00 4.02
1986 2164 6.128007 ACCAAAAGAGAACCAGCATAATTACG 60.128 38.462 0.00 0.00 0.00 3.18
1987 2165 7.158099 ACCAAAAGAGAACCAGCATAATTAC 57.842 36.000 0.00 0.00 0.00 1.89
1988 2166 7.775053 AACCAAAAGAGAACCAGCATAATTA 57.225 32.000 0.00 0.00 0.00 1.40
1989 2167 6.670695 AACCAAAAGAGAACCAGCATAATT 57.329 33.333 0.00 0.00 0.00 1.40
1990 2168 6.670695 AAACCAAAAGAGAACCAGCATAAT 57.329 33.333 0.00 0.00 0.00 1.28
1991 2169 6.478512 AAAACCAAAAGAGAACCAGCATAA 57.521 33.333 0.00 0.00 0.00 1.90
1992 2170 6.293735 CGTAAAACCAAAAGAGAACCAGCATA 60.294 38.462 0.00 0.00 0.00 3.14
1993 2171 5.507315 CGTAAAACCAAAAGAGAACCAGCAT 60.507 40.000 0.00 0.00 0.00 3.79
1994 2172 4.201970 CGTAAAACCAAAAGAGAACCAGCA 60.202 41.667 0.00 0.00 0.00 4.41
1995 2173 4.035909 TCGTAAAACCAAAAGAGAACCAGC 59.964 41.667 0.00 0.00 0.00 4.85
1996 2174 5.744666 TCGTAAAACCAAAAGAGAACCAG 57.255 39.130 0.00 0.00 0.00 4.00
1997 2175 5.823570 TCATCGTAAAACCAAAAGAGAACCA 59.176 36.000 0.00 0.00 0.00 3.67
1998 2176 6.308371 TCATCGTAAAACCAAAAGAGAACC 57.692 37.500 0.00 0.00 0.00 3.62
1999 2177 8.797266 ATTTCATCGTAAAACCAAAAGAGAAC 57.203 30.769 0.00 0.00 0.00 3.01
2000 2178 9.810545 AAATTTCATCGTAAAACCAAAAGAGAA 57.189 25.926 0.00 0.00 0.00 2.87
2001 2179 9.243637 CAAATTTCATCGTAAAACCAAAAGAGA 57.756 29.630 0.00 0.00 0.00 3.10
2002 2180 8.487176 CCAAATTTCATCGTAAAACCAAAAGAG 58.513 33.333 0.00 0.00 0.00 2.85
2003 2181 7.982354 ACCAAATTTCATCGTAAAACCAAAAGA 59.018 29.630 0.00 0.00 0.00 2.52
2004 2182 8.137210 ACCAAATTTCATCGTAAAACCAAAAG 57.863 30.769 0.00 0.00 0.00 2.27
2005 2183 9.250624 CTACCAAATTTCATCGTAAAACCAAAA 57.749 29.630 0.00 0.00 0.00 2.44
2006 2184 7.382759 GCTACCAAATTTCATCGTAAAACCAAA 59.617 33.333 0.00 0.00 0.00 3.28
2007 2185 6.864165 GCTACCAAATTTCATCGTAAAACCAA 59.136 34.615 0.00 0.00 0.00 3.67
2008 2186 6.383415 GCTACCAAATTTCATCGTAAAACCA 58.617 36.000 0.00 0.00 0.00 3.67
2009 2187 5.803461 GGCTACCAAATTTCATCGTAAAACC 59.197 40.000 0.00 0.00 0.00 3.27
2010 2188 6.383415 TGGCTACCAAATTTCATCGTAAAAC 58.617 36.000 0.00 0.00 0.00 2.43
2011 2189 6.576662 TGGCTACCAAATTTCATCGTAAAA 57.423 33.333 0.00 0.00 0.00 1.52
2012 2190 6.576662 TTGGCTACCAAATTTCATCGTAAA 57.423 33.333 0.00 0.00 40.92 2.01
2021 2199 7.874016 CATGCATACATATTGGCTACCAAATTT 59.126 33.333 0.00 0.00 39.88 1.82
2022 2200 7.015487 ACATGCATACATATTGGCTACCAAATT 59.985 33.333 0.00 0.00 39.88 1.82
2023 2201 6.494491 ACATGCATACATATTGGCTACCAAAT 59.506 34.615 0.00 0.00 39.88 2.32
2024 2202 5.832595 ACATGCATACATATTGGCTACCAAA 59.167 36.000 0.00 0.00 39.88 3.28
2025 2203 5.384336 ACATGCATACATATTGGCTACCAA 58.616 37.500 0.00 0.77 40.42 3.67
2026 2204 4.984295 ACATGCATACATATTGGCTACCA 58.016 39.130 0.00 0.00 33.67 3.25
2027 2205 5.964958 AACATGCATACATATTGGCTACC 57.035 39.130 0.00 0.00 33.67 3.18
2028 2206 6.094048 CCCTAACATGCATACATATTGGCTAC 59.906 42.308 0.00 0.00 33.67 3.58
2029 2207 6.179756 CCCTAACATGCATACATATTGGCTA 58.820 40.000 0.00 0.00 33.67 3.93
2030 2208 5.012239 CCCTAACATGCATACATATTGGCT 58.988 41.667 0.00 0.00 33.67 4.75
2031 2209 4.380867 GCCCTAACATGCATACATATTGGC 60.381 45.833 0.00 2.44 33.67 4.52
2032 2210 4.766373 TGCCCTAACATGCATACATATTGG 59.234 41.667 0.00 0.00 33.67 3.16
2033 2211 5.706833 TCTGCCCTAACATGCATACATATTG 59.293 40.000 0.00 0.00 36.79 1.90
2034 2212 5.879763 TCTGCCCTAACATGCATACATATT 58.120 37.500 0.00 0.00 36.79 1.28
2035 2213 5.503634 TCTGCCCTAACATGCATACATAT 57.496 39.130 0.00 0.00 36.79 1.78
2036 2214 4.972751 TCTGCCCTAACATGCATACATA 57.027 40.909 0.00 0.00 36.79 2.29
2037 2215 3.862877 TCTGCCCTAACATGCATACAT 57.137 42.857 0.00 0.00 36.79 2.29
2038 2216 3.862877 ATCTGCCCTAACATGCATACA 57.137 42.857 0.00 0.00 36.79 2.29
2039 2217 3.679980 CGTATCTGCCCTAACATGCATAC 59.320 47.826 0.00 0.00 36.79 2.39
2040 2218 3.323691 ACGTATCTGCCCTAACATGCATA 59.676 43.478 0.00 0.00 36.79 3.14
2041 2219 2.104792 ACGTATCTGCCCTAACATGCAT 59.895 45.455 0.00 0.00 36.79 3.96
2042 2220 1.484653 ACGTATCTGCCCTAACATGCA 59.515 47.619 0.00 0.00 35.86 3.96
2043 2221 1.867233 CACGTATCTGCCCTAACATGC 59.133 52.381 0.00 0.00 0.00 4.06
2044 2222 3.123804 GTCACGTATCTGCCCTAACATG 58.876 50.000 0.00 0.00 0.00 3.21
2045 2223 3.031736 AGTCACGTATCTGCCCTAACAT 58.968 45.455 0.00 0.00 0.00 2.71
2046 2224 2.165641 CAGTCACGTATCTGCCCTAACA 59.834 50.000 6.29 0.00 0.00 2.41
2047 2225 2.481449 CCAGTCACGTATCTGCCCTAAC 60.481 54.545 11.96 0.00 0.00 2.34
2048 2226 1.754803 CCAGTCACGTATCTGCCCTAA 59.245 52.381 11.96 0.00 0.00 2.69
2049 2227 1.341679 ACCAGTCACGTATCTGCCCTA 60.342 52.381 11.96 0.00 0.00 3.53
2050 2228 0.614979 ACCAGTCACGTATCTGCCCT 60.615 55.000 11.96 0.00 0.00 5.19
2051 2229 0.249398 AACCAGTCACGTATCTGCCC 59.751 55.000 11.96 0.00 0.00 5.36
2052 2230 2.537401 GTAACCAGTCACGTATCTGCC 58.463 52.381 11.96 0.00 0.00 4.85
2053 2231 2.537401 GGTAACCAGTCACGTATCTGC 58.463 52.381 11.96 1.57 0.00 4.26
2054 2232 2.163010 ACGGTAACCAGTCACGTATCTG 59.837 50.000 10.86 10.86 35.85 2.90
2055 2233 2.163010 CACGGTAACCAGTCACGTATCT 59.837 50.000 0.00 0.00 35.85 1.98
2056 2234 2.523015 CACGGTAACCAGTCACGTATC 58.477 52.381 0.00 0.00 35.85 2.24
2057 2235 1.203052 CCACGGTAACCAGTCACGTAT 59.797 52.381 0.00 0.00 35.85 3.06
2058 2236 0.597568 CCACGGTAACCAGTCACGTA 59.402 55.000 0.00 0.00 35.85 3.57
2059 2237 1.108727 TCCACGGTAACCAGTCACGT 61.109 55.000 0.00 0.00 38.43 4.49
2060 2238 0.245539 ATCCACGGTAACCAGTCACG 59.754 55.000 0.00 0.00 0.00 4.35
2061 2239 3.256558 GTTATCCACGGTAACCAGTCAC 58.743 50.000 0.00 0.00 0.00 3.67
2062 2240 2.898612 TGTTATCCACGGTAACCAGTCA 59.101 45.455 0.00 0.00 32.40 3.41
2063 2241 3.256558 GTGTTATCCACGGTAACCAGTC 58.743 50.000 0.00 0.00 33.61 3.51
2064 2242 3.323751 GTGTTATCCACGGTAACCAGT 57.676 47.619 0.00 0.00 33.61 4.00
2074 2252 5.104900 ACAAGATACAGGGAGTGTTATCCAC 60.105 44.000 0.00 0.00 44.89 4.02
2075 2253 5.030147 ACAAGATACAGGGAGTGTTATCCA 58.970 41.667 0.00 0.00 41.52 3.41
2076 2254 5.615925 ACAAGATACAGGGAGTGTTATCC 57.384 43.478 0.00 0.00 40.94 2.59
2077 2255 8.204836 ACAATACAAGATACAGGGAGTGTTATC 58.795 37.037 0.00 0.00 40.94 1.75
2078 2256 8.090788 ACAATACAAGATACAGGGAGTGTTAT 57.909 34.615 0.00 0.00 40.94 1.89
2079 2257 7.490657 ACAATACAAGATACAGGGAGTGTTA 57.509 36.000 0.00 0.00 40.94 2.41
2080 2258 6.374417 ACAATACAAGATACAGGGAGTGTT 57.626 37.500 0.00 0.00 40.94 3.32
2081 2259 7.565398 AGATACAATACAAGATACAGGGAGTGT 59.435 37.037 0.00 0.00 43.86 3.55
2082 2260 7.957002 AGATACAATACAAGATACAGGGAGTG 58.043 38.462 0.00 0.00 0.00 3.51
2083 2261 8.424918 CAAGATACAATACAAGATACAGGGAGT 58.575 37.037 0.00 0.00 0.00 3.85
2084 2262 7.386299 GCAAGATACAATACAAGATACAGGGAG 59.614 40.741 0.00 0.00 0.00 4.30
2085 2263 7.071196 AGCAAGATACAATACAAGATACAGGGA 59.929 37.037 0.00 0.00 0.00 4.20
2086 2264 7.172190 CAGCAAGATACAATACAAGATACAGGG 59.828 40.741 0.00 0.00 0.00 4.45
2087 2265 7.928167 TCAGCAAGATACAATACAAGATACAGG 59.072 37.037 0.00 0.00 0.00 4.00
2088 2266 8.877808 TCAGCAAGATACAATACAAGATACAG 57.122 34.615 0.00 0.00 0.00 2.74
2089 2267 9.481340 GATCAGCAAGATACAATACAAGATACA 57.519 33.333 0.00 0.00 37.00 2.29
2090 2268 9.703892 AGATCAGCAAGATACAATACAAGATAC 57.296 33.333 0.00 0.00 37.00 2.24
2131 2309 9.905713 ATTATATGAAGTGCTTCCTACTTTTGA 57.094 29.630 9.18 0.00 38.42 2.69
2163 2344 4.551388 GTGATCTCGGAATCTCATGTACC 58.449 47.826 0.00 0.00 0.00 3.34
2164 2345 4.551388 GGTGATCTCGGAATCTCATGTAC 58.449 47.826 0.00 0.00 0.00 2.90
2165 2346 3.253432 CGGTGATCTCGGAATCTCATGTA 59.747 47.826 0.00 0.00 0.00 2.29
2166 2347 2.035193 CGGTGATCTCGGAATCTCATGT 59.965 50.000 0.00 0.00 0.00 3.21
2167 2348 2.294512 TCGGTGATCTCGGAATCTCATG 59.705 50.000 2.87 0.00 0.00 3.07
2168 2349 2.587522 TCGGTGATCTCGGAATCTCAT 58.412 47.619 2.87 0.00 0.00 2.90
2182 2363 2.496111 GTGGTAATGGTTGTTCGGTGA 58.504 47.619 0.00 0.00 0.00 4.02
2241 2422 4.070552 AAGCCGTCTCCGACAGGC 62.071 66.667 16.47 16.47 45.29 4.85
2245 2426 2.126031 GGTCAAGCCGTCTCCGAC 60.126 66.667 0.00 0.00 35.63 4.79
2246 2427 1.906824 AAGGTCAAGCCGTCTCCGA 60.907 57.895 0.00 0.00 43.70 4.55
2252 2433 0.670546 CATCGACAAGGTCAAGCCGT 60.671 55.000 0.00 0.00 43.70 5.68
2280 2461 2.808543 GGAGCATGTTCACGAAGACTTT 59.191 45.455 11.93 0.00 0.00 2.66
2292 2473 3.118592 GCACTAGTCCTTAGGAGCATGTT 60.119 47.826 0.00 0.00 35.70 2.71
2295 2476 2.043227 GGCACTAGTCCTTAGGAGCAT 58.957 52.381 0.00 0.00 36.69 3.79
2299 2480 2.043939 TCTTGGGCACTAGTCCTTAGGA 59.956 50.000 0.00 0.00 41.31 2.94
2309 2490 2.196997 ATTGCGGCTCTTGGGCACTA 62.197 55.000 0.00 0.00 40.90 2.74
2312 2493 2.751436 GATTGCGGCTCTTGGGCA 60.751 61.111 0.00 0.00 40.90 5.36
2317 2498 2.372264 ACAATGATGATTGCGGCTCTT 58.628 42.857 4.66 0.00 42.54 2.85
2318 2499 2.048444 ACAATGATGATTGCGGCTCT 57.952 45.000 4.66 0.00 42.54 4.09
2335 2516 9.120538 GCTTCATATCTATTTAAGGGTTCAACA 57.879 33.333 0.00 0.00 0.00 3.33
2347 2528 6.058183 GGTGTCAGGTGCTTCATATCTATTT 58.942 40.000 0.00 0.00 0.00 1.40
2348 2529 5.130975 TGGTGTCAGGTGCTTCATATCTATT 59.869 40.000 0.00 0.00 0.00 1.73
2385 2566 3.370061 GGTGAGGTTAGGATTTTTCGTCG 59.630 47.826 0.00 0.00 0.00 5.12
2391 2572 1.340697 GGGCGGTGAGGTTAGGATTTT 60.341 52.381 0.00 0.00 0.00 1.82
2418 2599 1.006688 GGCGTGGATTTTTGCCGTT 60.007 52.632 0.00 0.00 37.81 4.44
2426 2607 1.195115 TAGAGCTCAGGCGTGGATTT 58.805 50.000 17.77 0.00 44.37 2.17
2431 2612 2.025719 TCGATAGAGCTCAGGCGTG 58.974 57.895 17.77 0.00 42.67 5.34
2451 2632 0.597072 AGTTCTTCCGACTGGACGTC 59.403 55.000 7.13 7.13 46.45 4.34
2465 2646 3.455328 TCGATCCTCGTCGAGTTCT 57.545 52.632 20.37 4.95 44.87 3.01
2483 2664 2.018515 TCGAGTTTGTTTTTCGGGCTT 58.981 42.857 0.00 0.00 35.21 4.35
2490 2671 4.557301 CGCTTGTTCTTCGAGTTTGTTTTT 59.443 37.500 0.00 0.00 0.00 1.94
2493 2674 2.538939 GCGCTTGTTCTTCGAGTTTGTT 60.539 45.455 0.00 0.00 0.00 2.83
2508 2689 1.597797 ATGGTTGATGGTGGCGCTTG 61.598 55.000 7.64 0.00 0.00 4.01
2516 2697 0.550914 ATGGCGGTATGGTTGATGGT 59.449 50.000 0.00 0.00 0.00 3.55
2522 2703 2.237643 TCACAAGTATGGCGGTATGGTT 59.762 45.455 0.00 0.00 0.00 3.67
2526 2707 2.102588 GTCCTCACAAGTATGGCGGTAT 59.897 50.000 0.00 0.00 0.00 2.73
2527 2708 1.479323 GTCCTCACAAGTATGGCGGTA 59.521 52.381 0.00 0.00 0.00 4.02
2529 2710 0.249120 TGTCCTCACAAGTATGGCGG 59.751 55.000 0.00 0.00 0.00 6.13
2541 2722 3.558033 GGTTAGGGTTTTTGTGTCCTCA 58.442 45.455 0.00 0.00 0.00 3.86
2548 2729 3.301794 AGTTCGGGTTAGGGTTTTTGT 57.698 42.857 0.00 0.00 0.00 2.83
2549 2730 3.887110 AGAAGTTCGGGTTAGGGTTTTTG 59.113 43.478 0.00 0.00 0.00 2.44
2563 2744 1.014352 CCGCCCCATTTAGAAGTTCG 58.986 55.000 0.00 0.00 0.00 3.95
2564 2745 2.289565 CTCCGCCCCATTTAGAAGTTC 58.710 52.381 0.00 0.00 0.00 3.01
2591 2772 2.670148 GGGGCGTGGAGGTGAATCT 61.670 63.158 0.00 0.00 0.00 2.40
2597 2778 3.953775 CAGTTGGGGCGTGGAGGT 61.954 66.667 0.00 0.00 0.00 3.85
2603 2784 2.281761 CTTCAGCAGTTGGGGCGT 60.282 61.111 0.00 0.00 36.08 5.68
2608 2789 2.979676 TGCCGCTTCAGCAGTTGG 60.980 61.111 0.00 0.00 42.21 3.77
2614 2795 3.621892 CTTTGCCTGCCGCTTCAGC 62.622 63.158 0.00 0.00 38.78 4.26
2615 2796 2.564975 CTTTGCCTGCCGCTTCAG 59.435 61.111 0.00 0.00 38.78 3.02
2645 2827 0.741221 ACTTCGCCATCGAGCCTTTC 60.741 55.000 0.00 0.00 46.34 2.62
2647 2829 0.535335 TAACTTCGCCATCGAGCCTT 59.465 50.000 0.00 0.00 46.34 4.35
2651 2833 1.063616 TCTCGTAACTTCGCCATCGAG 59.936 52.381 0.00 0.00 46.34 4.04
2652 2834 1.089112 TCTCGTAACTTCGCCATCGA 58.911 50.000 0.00 0.00 43.89 3.59
2653 2835 2.121116 ATCTCGTAACTTCGCCATCG 57.879 50.000 0.00 0.00 0.00 3.84
2654 2836 2.033662 GCAATCTCGTAACTTCGCCATC 60.034 50.000 0.00 0.00 0.00 3.51
2655 2837 1.933853 GCAATCTCGTAACTTCGCCAT 59.066 47.619 0.00 0.00 0.00 4.40
2656 2838 1.355971 GCAATCTCGTAACTTCGCCA 58.644 50.000 0.00 0.00 0.00 5.69
2657 2839 0.297820 CGCAATCTCGTAACTTCGCC 59.702 55.000 0.00 0.00 0.00 5.54
2658 2840 1.265568 TCGCAATCTCGTAACTTCGC 58.734 50.000 0.00 0.00 0.00 4.70
2659 2841 2.468040 GGATCGCAATCTCGTAACTTCG 59.532 50.000 0.00 0.00 32.12 3.79
2660 2842 2.468040 CGGATCGCAATCTCGTAACTTC 59.532 50.000 0.00 0.00 32.12 3.01
2661 2843 2.159282 ACGGATCGCAATCTCGTAACTT 60.159 45.455 0.17 0.00 37.17 2.66
2662 2844 1.404391 ACGGATCGCAATCTCGTAACT 59.596 47.619 0.17 0.00 37.17 2.24
2663 2845 1.836383 ACGGATCGCAATCTCGTAAC 58.164 50.000 0.17 0.00 37.17 2.50
2664 2846 3.696281 TTACGGATCGCAATCTCGTAA 57.304 42.857 13.57 13.57 42.30 3.18
2665 2847 3.909776 ATTACGGATCGCAATCTCGTA 57.090 42.857 4.82 4.82 38.69 3.43
2666 2848 2.795175 ATTACGGATCGCAATCTCGT 57.205 45.000 6.45 6.45 39.99 4.18
2667 2849 4.490959 GCAATATTACGGATCGCAATCTCG 60.491 45.833 0.00 0.00 34.07 4.04
2668 2850 4.388773 TGCAATATTACGGATCGCAATCTC 59.611 41.667 0.00 0.00 32.12 2.75
2669 2851 4.314961 TGCAATATTACGGATCGCAATCT 58.685 39.130 0.00 0.00 32.12 2.40
2670 2852 4.661993 TGCAATATTACGGATCGCAATC 57.338 40.909 0.00 0.00 0.00 2.67
2671 2853 5.220397 CGTATGCAATATTACGGATCGCAAT 60.220 40.000 9.25 0.00 37.98 3.56
2672 2854 4.090786 CGTATGCAATATTACGGATCGCAA 59.909 41.667 9.25 0.00 37.98 4.85
2673 2855 3.610677 CGTATGCAATATTACGGATCGCA 59.389 43.478 9.25 0.00 37.98 5.10
2674 2856 4.164802 CGTATGCAATATTACGGATCGC 57.835 45.455 9.25 0.00 37.98 4.58
2683 2865 8.846211 AGCAACTTTATTACCGTATGCAATATT 58.154 29.630 0.00 0.00 35.11 1.28
2684 2866 8.391075 AGCAACTTTATTACCGTATGCAATAT 57.609 30.769 0.00 0.00 35.11 1.28
2685 2867 7.795482 AGCAACTTTATTACCGTATGCAATA 57.205 32.000 0.00 0.00 35.11 1.90
2686 2868 6.693315 AGCAACTTTATTACCGTATGCAAT 57.307 33.333 0.00 0.00 35.11 3.56
2687 2869 6.594547 TGTAGCAACTTTATTACCGTATGCAA 59.405 34.615 0.00 0.00 35.11 4.08
2688 2870 6.107343 TGTAGCAACTTTATTACCGTATGCA 58.893 36.000 0.00 0.00 35.11 3.96
2689 2871 6.592798 TGTAGCAACTTTATTACCGTATGC 57.407 37.500 0.00 0.00 0.00 3.14
2693 2875 9.386010 TCAAATATGTAGCAACTTTATTACCGT 57.614 29.630 0.00 0.00 0.00 4.83
2700 2882 9.278978 TGACAGTTCAAATATGTAGCAACTTTA 57.721 29.630 0.00 0.00 0.00 1.85
2701 2883 8.076178 GTGACAGTTCAAATATGTAGCAACTTT 58.924 33.333 0.00 0.00 31.90 2.66
2702 2884 7.228507 TGTGACAGTTCAAATATGTAGCAACTT 59.771 33.333 0.00 0.00 31.90 2.66
2703 2885 6.710295 TGTGACAGTTCAAATATGTAGCAACT 59.290 34.615 0.00 0.00 31.90 3.16
2704 2886 6.898041 TGTGACAGTTCAAATATGTAGCAAC 58.102 36.000 0.00 0.00 31.90 4.17
2705 2887 7.503521 TTGTGACAGTTCAAATATGTAGCAA 57.496 32.000 0.00 0.00 31.90 3.91
2706 2888 7.390162 TGATTGTGACAGTTCAAATATGTAGCA 59.610 33.333 0.00 0.00 31.90 3.49
2707 2889 7.751732 TGATTGTGACAGTTCAAATATGTAGC 58.248 34.615 0.00 0.00 31.90 3.58
2708 2890 9.546909 GTTGATTGTGACAGTTCAAATATGTAG 57.453 33.333 12.59 0.00 31.90 2.74
2709 2891 9.061435 TGTTGATTGTGACAGTTCAAATATGTA 57.939 29.630 12.59 0.00 31.90 2.29
2710 2892 7.939782 TGTTGATTGTGACAGTTCAAATATGT 58.060 30.769 12.59 0.00 31.90 2.29
2711 2893 8.800231 TTGTTGATTGTGACAGTTCAAATATG 57.200 30.769 12.59 0.00 31.90 1.78
2712 2894 9.248291 GTTTGTTGATTGTGACAGTTCAAATAT 57.752 29.630 12.59 0.00 31.90 1.28
2713 2895 8.246871 TGTTTGTTGATTGTGACAGTTCAAATA 58.753 29.630 12.59 6.98 31.90 1.40
2714 2896 7.095910 TGTTTGTTGATTGTGACAGTTCAAAT 58.904 30.769 12.59 0.00 31.90 2.32
2715 2897 6.450545 TGTTTGTTGATTGTGACAGTTCAAA 58.549 32.000 12.59 8.12 31.90 2.69
2716 2898 6.018589 TGTTTGTTGATTGTGACAGTTCAA 57.981 33.333 8.40 8.40 31.90 2.69
2717 2899 5.635417 TGTTTGTTGATTGTGACAGTTCA 57.365 34.783 0.00 0.00 0.00 3.18
2718 2900 6.508404 GCATTGTTTGTTGATTGTGACAGTTC 60.508 38.462 0.00 0.00 0.00 3.01
2719 2901 5.291614 GCATTGTTTGTTGATTGTGACAGTT 59.708 36.000 0.00 0.00 0.00 3.16
2720 2902 4.805192 GCATTGTTTGTTGATTGTGACAGT 59.195 37.500 0.00 0.00 0.00 3.55
2721 2903 4.209703 GGCATTGTTTGTTGATTGTGACAG 59.790 41.667 0.00 0.00 0.00 3.51
2722 2904 4.118410 GGCATTGTTTGTTGATTGTGACA 58.882 39.130 0.00 0.00 0.00 3.58
2723 2905 3.494251 GGGCATTGTTTGTTGATTGTGAC 59.506 43.478 0.00 0.00 0.00 3.67
2724 2906 3.494048 GGGGCATTGTTTGTTGATTGTGA 60.494 43.478 0.00 0.00 0.00 3.58
2725 2907 2.807392 GGGGCATTGTTTGTTGATTGTG 59.193 45.455 0.00 0.00 0.00 3.33
2726 2908 2.224499 GGGGGCATTGTTTGTTGATTGT 60.224 45.455 0.00 0.00 0.00 2.71
2727 2909 2.224475 TGGGGGCATTGTTTGTTGATTG 60.224 45.455 0.00 0.00 0.00 2.67
2728 2910 2.053244 TGGGGGCATTGTTTGTTGATT 58.947 42.857 0.00 0.00 0.00 2.57
2729 2911 1.727062 TGGGGGCATTGTTTGTTGAT 58.273 45.000 0.00 0.00 0.00 2.57
2730 2912 1.500474 TTGGGGGCATTGTTTGTTGA 58.500 45.000 0.00 0.00 0.00 3.18
2731 2913 2.338577 TTTGGGGGCATTGTTTGTTG 57.661 45.000 0.00 0.00 0.00 3.33
2732 2914 3.372440 TTTTTGGGGGCATTGTTTGTT 57.628 38.095 0.00 0.00 0.00 2.83
2764 2946 9.695526 CCAGTGATTTTTCTCATGTTTGATTTA 57.304 29.630 0.00 0.00 0.00 1.40
2765 2947 7.172019 GCCAGTGATTTTTCTCATGTTTGATTT 59.828 33.333 0.00 0.00 0.00 2.17
2766 2948 6.647895 GCCAGTGATTTTTCTCATGTTTGATT 59.352 34.615 0.00 0.00 0.00 2.57
2767 2949 6.161381 GCCAGTGATTTTTCTCATGTTTGAT 58.839 36.000 0.00 0.00 0.00 2.57
2768 2950 5.509501 GGCCAGTGATTTTTCTCATGTTTGA 60.510 40.000 0.00 0.00 0.00 2.69
2769 2951 4.687483 GGCCAGTGATTTTTCTCATGTTTG 59.313 41.667 0.00 0.00 0.00 2.93
2770 2952 4.344679 TGGCCAGTGATTTTTCTCATGTTT 59.655 37.500 0.00 0.00 0.00 2.83
2771 2953 3.896888 TGGCCAGTGATTTTTCTCATGTT 59.103 39.130 0.00 0.00 0.00 2.71
2772 2954 3.499338 TGGCCAGTGATTTTTCTCATGT 58.501 40.909 0.00 0.00 0.00 3.21
2773 2955 4.219070 TCTTGGCCAGTGATTTTTCTCATG 59.781 41.667 5.11 0.00 0.00 3.07
2774 2956 4.410099 TCTTGGCCAGTGATTTTTCTCAT 58.590 39.130 5.11 0.00 0.00 2.90
2775 2957 3.831323 TCTTGGCCAGTGATTTTTCTCA 58.169 40.909 5.11 0.00 0.00 3.27
2776 2958 4.853924 TTCTTGGCCAGTGATTTTTCTC 57.146 40.909 5.11 0.00 0.00 2.87
2777 2959 5.612725 TTTTCTTGGCCAGTGATTTTTCT 57.387 34.783 5.11 0.00 0.00 2.52
2778 2960 5.759763 ACATTTTCTTGGCCAGTGATTTTTC 59.240 36.000 5.11 0.00 0.00 2.29
2779 2961 5.528320 CACATTTTCTTGGCCAGTGATTTTT 59.472 36.000 12.43 0.00 0.00 1.94
2780 2962 5.058490 CACATTTTCTTGGCCAGTGATTTT 58.942 37.500 12.43 0.00 0.00 1.82
2781 2963 4.634199 CACATTTTCTTGGCCAGTGATTT 58.366 39.130 12.43 0.00 0.00 2.17
2782 2964 3.555586 GCACATTTTCTTGGCCAGTGATT 60.556 43.478 19.91 3.76 0.00 2.57
2783 2965 2.028748 GCACATTTTCTTGGCCAGTGAT 60.029 45.455 19.91 3.76 0.00 3.06
2784 2966 1.340889 GCACATTTTCTTGGCCAGTGA 59.659 47.619 19.91 13.57 0.00 3.41
2785 2967 1.606224 GGCACATTTTCTTGGCCAGTG 60.606 52.381 5.11 10.23 44.01 3.66
2786 2968 0.681175 GGCACATTTTCTTGGCCAGT 59.319 50.000 5.11 0.00 44.01 4.00
2787 2969 0.971386 AGGCACATTTTCTTGGCCAG 59.029 50.000 5.11 0.00 46.96 4.85
2788 2970 2.300956 TAGGCACATTTTCTTGGCCA 57.699 45.000 0.00 0.00 46.96 5.36
2789 2971 2.825532 TCTTAGGCACATTTTCTTGGCC 59.174 45.455 0.00 0.00 44.92 5.36
2790 2972 4.021981 ACTTCTTAGGCACATTTTCTTGGC 60.022 41.667 0.00 0.00 38.55 4.52
2791 2973 5.335976 GGACTTCTTAGGCACATTTTCTTGG 60.336 44.000 0.00 0.00 0.00 3.61
2792 2974 5.241506 TGGACTTCTTAGGCACATTTTCTTG 59.758 40.000 0.00 0.00 0.00 3.02
2793 2975 5.385198 TGGACTTCTTAGGCACATTTTCTT 58.615 37.500 0.00 0.00 0.00 2.52
2794 2976 4.985538 TGGACTTCTTAGGCACATTTTCT 58.014 39.130 0.00 0.00 0.00 2.52
2795 2977 5.705609 TTGGACTTCTTAGGCACATTTTC 57.294 39.130 0.00 0.00 0.00 2.29
2796 2978 6.478512 TTTTGGACTTCTTAGGCACATTTT 57.521 33.333 0.00 0.00 0.00 1.82
2797 2979 6.670695 ATTTTGGACTTCTTAGGCACATTT 57.329 33.333 0.00 0.00 0.00 2.32
2798 2980 7.615365 TCATATTTTGGACTTCTTAGGCACATT 59.385 33.333 0.00 0.00 0.00 2.71
2799 2981 7.118723 TCATATTTTGGACTTCTTAGGCACAT 58.881 34.615 0.00 0.00 0.00 3.21
2800 2982 6.480763 TCATATTTTGGACTTCTTAGGCACA 58.519 36.000 0.00 0.00 0.00 4.57
2801 2983 7.391148 TTCATATTTTGGACTTCTTAGGCAC 57.609 36.000 0.00 0.00 0.00 5.01
2802 2984 8.055181 AGATTCATATTTTGGACTTCTTAGGCA 58.945 33.333 0.00 0.00 0.00 4.75
2803 2985 8.348507 CAGATTCATATTTTGGACTTCTTAGGC 58.651 37.037 0.00 0.00 0.00 3.93
2804 2986 8.844244 CCAGATTCATATTTTGGACTTCTTAGG 58.156 37.037 0.00 0.00 0.00 2.69
2805 2987 9.401058 ACCAGATTCATATTTTGGACTTCTTAG 57.599 33.333 0.00 0.00 33.19 2.18
2806 2988 9.396022 GACCAGATTCATATTTTGGACTTCTTA 57.604 33.333 0.00 0.00 33.19 2.10
2807 2989 7.340487 GGACCAGATTCATATTTTGGACTTCTT 59.660 37.037 0.00 0.00 33.19 2.52
2808 2990 6.830838 GGACCAGATTCATATTTTGGACTTCT 59.169 38.462 0.00 0.00 33.19 2.85
2809 2991 6.603201 TGGACCAGATTCATATTTTGGACTTC 59.397 38.462 0.00 0.00 33.19 3.01
2810 2992 6.493166 TGGACCAGATTCATATTTTGGACTT 58.507 36.000 0.00 0.00 33.19 3.01
2811 2993 6.078456 TGGACCAGATTCATATTTTGGACT 57.922 37.500 0.00 0.00 33.19 3.85
2812 2994 6.603201 TCTTGGACCAGATTCATATTTTGGAC 59.397 38.462 0.00 0.00 33.19 4.02
2813 2995 6.730447 TCTTGGACCAGATTCATATTTTGGA 58.270 36.000 0.00 0.00 33.19 3.53
2814 2996 7.123247 AGTTCTTGGACCAGATTCATATTTTGG 59.877 37.037 0.00 0.00 35.07 3.28
2815 2997 8.059798 AGTTCTTGGACCAGATTCATATTTTG 57.940 34.615 0.00 0.00 0.00 2.44
2816 2998 8.655935 AAGTTCTTGGACCAGATTCATATTTT 57.344 30.769 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.