Multiple sequence alignment - TraesCS7A01G104800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G104800 chr7A 100.000 4726 0 0 1 4726 63707073 63711798 0.000000e+00 8728.0
1 TraesCS7A01G104800 chr7A 88.228 858 83 13 3099 3942 63554360 63553507 0.000000e+00 1009.0
2 TraesCS7A01G104800 chr7A 90.000 590 43 8 3273 3849 63577864 63577278 0.000000e+00 749.0
3 TraesCS7A01G104800 chr7A 84.987 373 33 10 4360 4725 63470410 63470766 1.620000e-94 357.0
4 TraesCS7A01G104800 chr7A 91.071 168 11 3 4199 4362 63470881 63471048 1.710000e-54 224.0
5 TraesCS7A01G104800 chr7A 86.772 189 22 3 2967 3152 63578469 63578281 1.720000e-49 207.0
6 TraesCS7A01G104800 chr7D 87.451 3586 278 83 586 4037 59094360 59090813 0.000000e+00 3971.0
7 TraesCS7A01G104800 chr7D 90.240 584 43 7 3289 3860 58992889 58992308 0.000000e+00 750.0
8 TraesCS7A01G104800 chr7D 87.218 532 47 8 1 511 59095243 59094712 1.890000e-163 586.0
9 TraesCS7A01G104800 chr7D 85.215 372 31 11 4360 4725 58876814 58877167 1.250000e-95 361.0
10 TraesCS7A01G104800 chr7D 85.281 231 30 4 3027 3253 58993480 58993250 7.910000e-58 235.0
11 TraesCS7A01G104800 chr7D 88.889 153 11 2 2818 2967 58994051 58993902 2.900000e-42 183.0
12 TraesCS7A01G104800 chr7D 96.825 63 2 0 2967 3029 58993802 58993740 6.470000e-19 106.0
13 TraesCS7A01G104800 chr4A 90.067 2668 190 42 638 3253 676531333 676528689 0.000000e+00 3389.0
14 TraesCS7A01G104800 chr4A 91.111 990 67 9 2967 3944 676456804 676455824 0.000000e+00 1321.0
15 TraesCS7A01G104800 chr4A 94.199 724 36 5 3273 3993 676528352 676527632 0.000000e+00 1099.0
16 TraesCS7A01G104800 chr4A 89.106 615 47 10 1 595 676532183 676531569 0.000000e+00 747.0
17 TraesCS7A01G104800 chr4A 85.317 252 27 5 3720 3963 676362453 676362204 7.850000e-63 252.0
18 TraesCS7A01G104800 chr4A 92.199 141 6 2 2829 2967 676493850 676493713 1.340000e-45 195.0
19 TraesCS7A01G104800 chr5B 88.194 144 15 2 4575 4717 239257856 239257998 2.260000e-38 171.0
20 TraesCS7A01G104800 chr5B 84.127 63 10 0 4122 4184 508775347 508775285 1.420000e-05 62.1
21 TraesCS7A01G104800 chr2A 84.962 133 18 2 4585 4717 439373978 439373848 2.970000e-27 134.0
22 TraesCS7A01G104800 chr6D 100.000 28 0 0 3453 3480 169248727 169248754 9.000000e-03 52.8
23 TraesCS7A01G104800 chr3D 100.000 28 0 0 3453 3480 154754800 154754773 9.000000e-03 52.8
24 TraesCS7A01G104800 chr3D 100.000 28 0 0 3453 3480 369031623 369031596 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G104800 chr7A 63707073 63711798 4725 False 8728.0 8728 100.00000 1 4726 1 chr7A.!!$F1 4725
1 TraesCS7A01G104800 chr7A 63553507 63554360 853 True 1009.0 1009 88.22800 3099 3942 1 chr7A.!!$R1 843
2 TraesCS7A01G104800 chr7A 63577278 63578469 1191 True 478.0 749 88.38600 2967 3849 2 chr7A.!!$R2 882
3 TraesCS7A01G104800 chr7A 63470410 63471048 638 False 290.5 357 88.02900 4199 4725 2 chr7A.!!$F2 526
4 TraesCS7A01G104800 chr7D 59090813 59095243 4430 True 2278.5 3971 87.33450 1 4037 2 chr7D.!!$R2 4036
5 TraesCS7A01G104800 chr7D 58992308 58994051 1743 True 318.5 750 90.30875 2818 3860 4 chr7D.!!$R1 1042
6 TraesCS7A01G104800 chr4A 676527632 676532183 4551 True 1745.0 3389 91.12400 1 3993 3 chr4A.!!$R4 3992
7 TraesCS7A01G104800 chr4A 676455824 676456804 980 True 1321.0 1321 91.11100 2967 3944 1 chr4A.!!$R2 977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
281 286 0.249073 CAATGGAGTAGACGCGGAGG 60.249 60.0 12.47 0.0 0.00 4.30 F
286 291 0.656785 GAGTAGACGCGGAGGTGTAG 59.343 60.0 12.47 0.0 36.92 2.74 F
288 293 0.745845 GTAGACGCGGAGGTGTAGGA 60.746 60.0 12.47 0.0 36.92 2.94 F
1563 2131 0.169672 CAAATCTGCTTCACCGCCAG 59.830 55.0 0.00 0.0 0.00 4.85 F
2489 3115 0.106719 TATTGGGCAAGTAGGCAGGC 60.107 55.0 0.00 0.0 46.44 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1544 2112 0.169672 CTGGCGGTGAAGCAGATTTG 59.830 55.000 0.00 0.00 39.27 2.32 R
1563 2131 1.958417 GCATTTTGCATTGCACTTGC 58.042 45.000 11.66 15.88 44.26 4.01 R
1677 2272 4.876107 ACCATCCAATTCATACTGTCGTTC 59.124 41.667 0.00 0.00 0.00 3.95 R
3136 4161 0.038310 CAAAGGGTTCTCCAGGGACC 59.962 60.000 0.00 0.00 38.24 4.46 R
3876 5298 0.036306 CCACGCAAAACTACCTCCCT 59.964 55.000 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.217131 CATATGTCTGATTGATTTCCTTGTCA 57.783 34.615 0.00 0.00 0.00 3.58
106 107 0.319900 CGTCCTTGTCCAGTGTCCTG 60.320 60.000 0.00 0.00 38.50 3.86
153 154 2.224066 GGATCTTCACCTATCACCGTGG 60.224 54.545 0.00 0.00 0.00 4.94
166 167 2.293122 TCACCGTGGCAAGAAAAATGAG 59.707 45.455 0.76 0.00 0.00 2.90
168 169 2.293399 ACCGTGGCAAGAAAAATGAGAC 59.707 45.455 0.76 0.00 0.00 3.36
235 240 1.399440 CATTCATGGCAACTGAGGTCG 59.601 52.381 0.00 0.00 37.61 4.79
240 245 2.584391 GGCAACTGAGGTCGGAGGT 61.584 63.158 0.00 0.00 0.00 3.85
250 255 2.027625 GTCGGAGGTCAGGTTTGCG 61.028 63.158 0.00 0.00 0.00 4.85
260 265 0.535335 CAGGTTTGCGGCTAGGAGTA 59.465 55.000 0.00 0.00 0.00 2.59
270 275 2.431057 CGGCTAGGAGTAACAATGGAGT 59.569 50.000 0.00 0.00 0.00 3.85
273 278 4.894114 GGCTAGGAGTAACAATGGAGTAGA 59.106 45.833 0.00 0.00 0.00 2.59
274 279 5.221283 GGCTAGGAGTAACAATGGAGTAGAC 60.221 48.000 0.00 0.00 0.00 2.59
275 280 4.985538 AGGAGTAACAATGGAGTAGACG 57.014 45.455 0.00 0.00 0.00 4.18
277 282 3.106672 GAGTAACAATGGAGTAGACGCG 58.893 50.000 3.53 3.53 0.00 6.01
278 283 2.159282 AGTAACAATGGAGTAGACGCGG 60.159 50.000 12.47 0.00 0.00 6.46
279 284 0.892755 AACAATGGAGTAGACGCGGA 59.107 50.000 12.47 0.00 0.00 5.54
281 286 0.249073 CAATGGAGTAGACGCGGAGG 60.249 60.000 12.47 0.00 0.00 4.30
285 290 0.745845 GGAGTAGACGCGGAGGTGTA 60.746 60.000 12.47 0.00 36.92 2.90
286 291 0.656785 GAGTAGACGCGGAGGTGTAG 59.343 60.000 12.47 0.00 36.92 2.74
287 292 0.747283 AGTAGACGCGGAGGTGTAGG 60.747 60.000 12.47 0.00 36.92 3.18
288 293 0.745845 GTAGACGCGGAGGTGTAGGA 60.746 60.000 12.47 0.00 36.92 2.94
321 347 3.177884 AGCAGCACAGGGGTTGGA 61.178 61.111 0.00 0.00 0.00 3.53
333 359 1.492764 GGGTTGGAAGGAGATCCGTA 58.507 55.000 0.00 0.00 42.76 4.02
344 378 2.032620 GAGATCCGTATGGTGTGGAGT 58.967 52.381 0.00 0.00 34.75 3.85
347 381 0.892755 TCCGTATGGTGTGGAGTGTC 59.107 55.000 0.00 0.00 36.30 3.67
669 1173 2.261671 GGCAGCGAGTCGGAGAAA 59.738 61.111 15.52 0.00 39.69 2.52
676 1180 1.002366 CGAGTCGGAGAAAATGCAGG 58.998 55.000 4.10 0.00 39.69 4.85
677 1181 1.404181 CGAGTCGGAGAAAATGCAGGA 60.404 52.381 4.10 0.00 39.69 3.86
679 1183 1.065854 AGTCGGAGAAAATGCAGGAGG 60.066 52.381 0.00 0.00 39.69 4.30
680 1184 1.066143 GTCGGAGAAAATGCAGGAGGA 60.066 52.381 0.00 0.00 39.69 3.71
681 1185 1.208052 TCGGAGAAAATGCAGGAGGAG 59.792 52.381 0.00 0.00 0.00 3.69
682 1186 1.065854 CGGAGAAAATGCAGGAGGAGT 60.066 52.381 0.00 0.00 0.00 3.85
683 1187 2.168521 CGGAGAAAATGCAGGAGGAGTA 59.831 50.000 0.00 0.00 0.00 2.59
685 1189 3.452627 GGAGAAAATGCAGGAGGAGTAGA 59.547 47.826 0.00 0.00 0.00 2.59
686 1190 4.102367 GGAGAAAATGCAGGAGGAGTAGAT 59.898 45.833 0.00 0.00 0.00 1.98
687 1191 5.033589 AGAAAATGCAGGAGGAGTAGATG 57.966 43.478 0.00 0.00 0.00 2.90
763 1275 0.896226 GCTACCTCGGTTCTCCTTGT 59.104 55.000 0.00 0.00 0.00 3.16
960 1475 4.697756 CCCGCCACCGCTTCAAGA 62.698 66.667 0.00 0.00 0.00 3.02
964 1479 2.970974 GCCACCGCTTCAAGACTGC 61.971 63.158 0.00 0.00 0.00 4.40
965 1480 1.597854 CCACCGCTTCAAGACTGCA 60.598 57.895 0.00 0.00 0.00 4.41
966 1481 1.572085 CCACCGCTTCAAGACTGCAG 61.572 60.000 13.48 13.48 0.00 4.41
967 1482 1.963338 ACCGCTTCAAGACTGCAGC 60.963 57.895 15.27 6.85 38.33 5.25
986 1501 2.601666 AGCCACTGACCGAGCTGA 60.602 61.111 0.00 0.00 33.41 4.26
1022 1562 3.780173 GAGAGGAAGCGCTGCCCT 61.780 66.667 31.70 28.48 0.00 5.19
1068 1608 2.046507 GTGCTCCTCCTGCTGGTG 60.047 66.667 9.73 7.12 34.23 4.17
1233 1773 2.897969 GTCCTCCAAGAAGGTACTGTGA 59.102 50.000 0.00 0.00 40.86 3.58
1234 1774 2.897969 TCCTCCAAGAAGGTACTGTGAC 59.102 50.000 0.00 0.00 40.86 3.67
1256 1810 3.703556 CTCTTCTGCTCATCTGGTTAGGA 59.296 47.826 0.00 0.00 0.00 2.94
1260 1814 1.008327 TGCTCATCTGGTTAGGAGGGA 59.992 52.381 0.00 0.00 0.00 4.20
1272 1826 1.506025 AGGAGGGAGAATTCTGAGCC 58.494 55.000 14.00 7.94 0.00 4.70
1275 1829 1.524849 GGGAGAATTCTGAGCCGGC 60.525 63.158 21.89 21.89 0.00 6.13
1292 1846 2.490328 GGCTGATGAAGTCGAGAGAG 57.510 55.000 0.00 0.00 43.49 3.20
1415 1969 1.360551 CATCGTCGAGAAGGGCGAT 59.639 57.895 0.00 0.99 43.63 4.58
1417 1971 1.001706 CATCGTCGAGAAGGGCGATAA 60.002 52.381 6.10 0.00 41.35 1.75
1437 1991 0.933796 GCTCGAGGTAAATCTGCTGC 59.066 55.000 15.58 0.00 0.00 5.25
1442 1996 2.744202 CGAGGTAAATCTGCTGCAACTT 59.256 45.455 3.02 0.00 0.00 2.66
1458 2012 1.518572 CTTAGGCGGATTCGTGCGT 60.519 57.895 0.00 1.34 38.89 5.24
1490 2045 1.945819 GCTGACGGGAAATTGCTCTGA 60.946 52.381 0.00 0.00 0.00 3.27
1491 2046 2.005451 CTGACGGGAAATTGCTCTGAG 58.995 52.381 0.00 0.00 0.00 3.35
1492 2047 1.347707 TGACGGGAAATTGCTCTGAGT 59.652 47.619 6.53 0.00 0.00 3.41
1493 2048 1.734465 GACGGGAAATTGCTCTGAGTG 59.266 52.381 6.53 0.00 0.00 3.51
1544 2112 2.757314 CCTCCAGGCTCCAAAAGATTTC 59.243 50.000 0.00 0.00 0.00 2.17
1563 2131 0.169672 CAAATCTGCTTCACCGCCAG 59.830 55.000 0.00 0.00 0.00 4.85
1576 2144 2.340809 GCCAGCAAGTGCAATGCA 59.659 55.556 23.19 2.72 46.22 3.96
1587 2182 4.261578 AGTGCAATGCAAAATGCTAAGT 57.738 36.364 10.44 4.80 45.31 2.24
1618 2213 5.295045 TGCGACTCAGATCGTATACTTTGTA 59.705 40.000 0.56 0.00 44.13 2.41
1623 2218 8.687292 ACTCAGATCGTATACTTTGTATACCA 57.313 34.615 17.15 9.06 0.00 3.25
1624 2219 9.128404 ACTCAGATCGTATACTTTGTATACCAA 57.872 33.333 17.15 9.64 0.00 3.67
1643 2238 4.535692 ACCAAAGTGGCCATAATTGGAATT 59.464 37.500 35.10 20.61 45.48 2.17
1648 2243 4.111916 GTGGCCATAATTGGAATTCAACG 58.888 43.478 9.72 0.00 46.92 4.10
1656 2251 7.598493 CCATAATTGGAATTCAACGAAACAGTT 59.402 33.333 7.93 0.37 46.92 3.16
1670 2265 6.668323 ACGAAACAGTTATCAAACAGATTGG 58.332 36.000 0.00 0.00 39.62 3.16
1724 2319 8.182227 GGTTTCATTTAGGAAGTTCCTTATTCG 58.818 37.037 29.09 14.20 46.91 3.34
1727 2322 8.263940 TCATTTAGGAAGTTCCTTATTCGTTG 57.736 34.615 29.09 16.07 46.91 4.10
1732 2327 5.011738 AGGAAGTTCCTTATTCGTTGACTCA 59.988 40.000 19.27 0.00 46.91 3.41
1734 2329 5.470047 AGTTCCTTATTCGTTGACTCAGT 57.530 39.130 0.00 0.00 0.00 3.41
1736 2331 4.188247 TCCTTATTCGTTGACTCAGTGG 57.812 45.455 0.00 0.00 0.00 4.00
1753 2348 7.509546 ACTCAGTGGAGAAATTGACTCTTTTA 58.490 34.615 11.09 0.00 44.26 1.52
1797 2400 3.971245 AGCTAGTTCTGTTTCCTCCTG 57.029 47.619 0.00 0.00 0.00 3.86
1888 2510 6.867816 CCTAGCATCTCAGTCACATTCTAATC 59.132 42.308 0.00 0.00 0.00 1.75
2121 2747 9.671279 ACTGTTGAGTAAATGATATTGTGATGA 57.329 29.630 0.00 0.00 0.00 2.92
2175 2801 8.469200 TCTATGCCAATTCTTCAAATTAGTTGG 58.531 33.333 0.00 0.00 37.85 3.77
2176 2802 6.418057 TGCCAATTCTTCAAATTAGTTGGT 57.582 33.333 0.00 0.00 37.52 3.67
2251 2877 9.466497 ACCATTATTTCTGTTGAACTATGTGAT 57.534 29.630 0.00 0.00 31.02 3.06
2262 2888 7.174772 TGTTGAACTATGTGATATGTTGTGCTT 59.825 33.333 0.00 0.00 0.00 3.91
2263 2889 7.686438 TGAACTATGTGATATGTTGTGCTTT 57.314 32.000 0.00 0.00 0.00 3.51
2426 3052 5.453198 CCACCAGTTCCAAAAGTAAGCATTT 60.453 40.000 0.00 0.00 0.00 2.32
2445 3071 0.110486 TCCAGTCTTGTTTCTGCCCC 59.890 55.000 0.00 0.00 0.00 5.80
2489 3115 0.106719 TATTGGGCAAGTAGGCAGGC 60.107 55.000 0.00 0.00 46.44 4.85
2561 3187 2.477754 CACTGAGTACACGTCGTAGTGA 59.522 50.000 15.43 2.49 44.43 3.41
2610 3237 5.244851 TGGCTTTATTTTGGTACTTGCATCA 59.755 36.000 0.00 0.00 0.00 3.07
2632 3259 4.842531 AGGAAATAGGGGCAAATTTTGG 57.157 40.909 10.96 0.00 0.00 3.28
2635 3262 3.348647 AATAGGGGCAAATTTTGGTGC 57.651 42.857 10.96 0.00 40.14 5.01
2671 3298 8.637196 TGGACATGGATACTATACTAGTCTTG 57.363 38.462 0.00 0.00 40.14 3.02
2748 3375 2.231235 CAGGTTTACTTCCATGTTGGCC 59.769 50.000 0.00 0.00 37.47 5.36
2763 3390 2.814336 GTTGGCCAACTTAACTCAGAGG 59.186 50.000 36.26 0.00 38.25 3.69
2831 3476 2.203401 GCATCTGATCTGTCTGCTGTC 58.797 52.381 16.61 0.00 0.00 3.51
2928 3587 9.916360 AAAGAAACCTTTCCTAGAAGTAAAAGA 57.084 29.630 0.00 0.00 37.92 2.52
2929 3588 9.916360 AAGAAACCTTTCCTAGAAGTAAAAGAA 57.084 29.630 0.00 0.00 37.92 2.52
2930 3589 9.562408 AGAAACCTTTCCTAGAAGTAAAAGAAG 57.438 33.333 0.00 0.00 37.92 2.85
3011 3771 5.653255 AGGACCTGATTATAATGCCTGTT 57.347 39.130 1.78 0.00 0.00 3.16
3058 4080 4.917887 CAGTTAACTGTCTGCTGCTAAG 57.082 45.455 24.70 0.00 39.09 2.18
3073 4095 5.104776 TGCTGCTAAGAAGTATCTGGATGTT 60.105 40.000 0.00 0.00 35.59 2.71
3077 4099 6.611642 TGCTAAGAAGTATCTGGATGTTAGGT 59.388 38.462 0.00 0.00 35.59 3.08
3079 4101 7.988028 GCTAAGAAGTATCTGGATGTTAGGTTT 59.012 37.037 0.00 0.00 35.59 3.27
3082 4104 7.918076 AGAAGTATCTGGATGTTAGGTTTTGA 58.082 34.615 0.00 0.00 33.59 2.69
3087 4109 5.313712 TCTGGATGTTAGGTTTTGAGAACC 58.686 41.667 0.00 0.00 40.58 3.62
3088 4110 4.403734 TGGATGTTAGGTTTTGAGAACCC 58.596 43.478 0.70 0.00 41.18 4.11
3092 4117 5.845391 TGTTAGGTTTTGAGAACCCTTTG 57.155 39.130 0.70 0.00 41.18 2.77
3095 4120 2.695147 AGGTTTTGAGAACCCTTTGCAG 59.305 45.455 0.70 0.00 41.18 4.41
3106 4131 1.829222 CCCTTTGCAGGCATTTCTGAT 59.171 47.619 0.00 0.00 39.20 2.90
3136 4161 5.698545 TCAATTTTAAAAATTGCAGGACCGG 59.301 36.000 4.44 0.00 37.50 5.28
3137 4162 3.669251 TTTAAAAATTGCAGGACCGGG 57.331 42.857 6.32 0.00 0.00 5.73
3166 4197 2.043604 AACCCTTTGCAGCAAAGCCC 62.044 55.000 34.01 0.00 46.44 5.19
3212 4270 8.592809 AGAAGATAATGAGATCAATGGAGGTAC 58.407 37.037 0.00 0.00 0.00 3.34
3228 4287 8.904099 ATGGAGGTACATATTTTAGCTGTAAC 57.096 34.615 0.00 0.00 34.08 2.50
3302 4693 0.966875 GTTGATGACAGGGCATGCCA 60.967 55.000 36.56 17.73 37.98 4.92
3545 4953 3.526931 TCGTATTTCCTCTGCTCCTTG 57.473 47.619 0.00 0.00 0.00 3.61
3732 5142 4.437930 GCAAAAGCGAGCTATGAAGAACAT 60.438 41.667 12.92 0.00 42.39 2.71
3759 5176 1.511887 CTCAAATTGGTTCGGCGCG 60.512 57.895 0.00 0.00 0.00 6.86
3772 5189 2.551270 GCGCGTCAACCTTCTGTG 59.449 61.111 8.43 0.00 0.00 3.66
3780 5200 2.289002 GTCAACCTTCTGTGCAGAACTG 59.711 50.000 10.26 8.45 42.06 3.16
3892 5314 2.484264 CTCAAAGGGAGGTAGTTTTGCG 59.516 50.000 0.00 0.00 40.13 4.85
3893 5315 2.158726 TCAAAGGGAGGTAGTTTTGCGT 60.159 45.455 0.00 0.00 32.14 5.24
3899 5321 1.944709 GAGGTAGTTTTGCGTGGTTGT 59.055 47.619 0.00 0.00 0.00 3.32
3952 5374 3.678056 ACTCTGTAAATGAGCGGACAA 57.322 42.857 0.00 0.00 35.12 3.18
3958 5380 3.994392 TGTAAATGAGCGGACAAACTCTC 59.006 43.478 0.00 0.00 33.92 3.20
3963 5385 4.537135 TGAGCGGACAAACTCTCTAAAT 57.463 40.909 0.00 0.00 33.92 1.40
3964 5386 4.245660 TGAGCGGACAAACTCTCTAAATG 58.754 43.478 0.00 0.00 33.92 2.32
3966 5388 4.499183 AGCGGACAAACTCTCTAAATGAG 58.501 43.478 0.00 0.00 43.96 2.90
3967 5389 3.062774 GCGGACAAACTCTCTAAATGAGC 59.937 47.826 0.00 0.00 42.38 4.26
3968 5390 3.304559 CGGACAAACTCTCTAAATGAGCG 59.695 47.826 0.00 0.00 42.38 5.03
3969 5391 4.495422 GGACAAACTCTCTAAATGAGCGA 58.505 43.478 0.00 0.00 42.38 4.93
3970 5392 4.327627 GGACAAACTCTCTAAATGAGCGAC 59.672 45.833 0.00 0.00 42.38 5.19
3971 5393 4.246458 ACAAACTCTCTAAATGAGCGACC 58.754 43.478 0.00 0.00 42.38 4.79
3973 5395 2.093106 ACTCTCTAAATGAGCGACCGT 58.907 47.619 0.00 0.00 42.38 4.83
3974 5396 2.159366 ACTCTCTAAATGAGCGACCGTG 60.159 50.000 0.00 0.00 42.38 4.94
3975 5397 0.924090 CTCTAAATGAGCGACCGTGC 59.076 55.000 0.00 0.00 35.84 5.34
3993 5419 3.822594 TGCTATTTAACGTGCACAAGG 57.177 42.857 18.64 2.84 0.00 3.61
4017 5444 1.012841 GAAGCAAATCGAGAGGCAGG 58.987 55.000 7.57 0.00 0.00 4.85
4019 5446 1.221840 GCAAATCGAGAGGCAGGGA 59.778 57.895 0.00 0.00 0.00 4.20
4023 5450 3.808728 CAAATCGAGAGGCAGGGAAATA 58.191 45.455 0.00 0.00 0.00 1.40
4026 5453 1.070758 TCGAGAGGCAGGGAAATATGC 59.929 52.381 0.00 0.00 41.80 3.14
4029 5456 1.845809 GAGGCAGGGAAATATGCGCG 61.846 60.000 0.00 0.00 43.49 6.86
4033 5460 4.025401 GGGAAATATGCGCGGCGG 62.025 66.667 25.03 5.97 0.00 6.13
4050 5477 3.568686 GCCGATGTGTGGCGTAAA 58.431 55.556 0.00 0.00 43.70 2.01
4051 5478 1.423845 GCCGATGTGTGGCGTAAAG 59.576 57.895 0.00 0.00 43.70 1.85
4052 5479 2.577763 GCCGATGTGTGGCGTAAAGC 62.578 60.000 0.00 0.00 43.70 3.51
4063 5490 2.431539 CGTAAAGCAGCGAACTCGT 58.568 52.632 0.51 0.00 42.22 4.18
4064 5491 1.609932 CGTAAAGCAGCGAACTCGTA 58.390 50.000 0.51 0.00 42.22 3.43
4065 5492 1.578023 CGTAAAGCAGCGAACTCGTAG 59.422 52.381 0.51 0.00 42.22 3.51
4066 5493 1.320852 GTAAAGCAGCGAACTCGTAGC 59.679 52.381 9.03 9.03 42.22 3.58
4067 5494 0.319555 AAAGCAGCGAACTCGTAGCA 60.320 50.000 16.25 0.00 41.28 3.49
4068 5495 0.319555 AAGCAGCGAACTCGTAGCAA 60.320 50.000 16.25 0.00 41.28 3.91
4069 5496 0.319555 AGCAGCGAACTCGTAGCAAA 60.320 50.000 16.25 0.00 41.28 3.68
4070 5497 0.721718 GCAGCGAACTCGTAGCAAAT 59.278 50.000 11.29 0.00 42.22 2.32
4071 5498 1.267087 GCAGCGAACTCGTAGCAAATC 60.267 52.381 11.29 0.00 42.22 2.17
4072 5499 1.992667 CAGCGAACTCGTAGCAAATCA 59.007 47.619 0.51 0.00 42.22 2.57
4073 5500 2.604914 CAGCGAACTCGTAGCAAATCAT 59.395 45.455 0.51 0.00 42.22 2.45
4074 5501 3.796717 CAGCGAACTCGTAGCAAATCATA 59.203 43.478 0.51 0.00 42.22 2.15
4075 5502 4.267690 CAGCGAACTCGTAGCAAATCATAA 59.732 41.667 0.51 0.00 42.22 1.90
4076 5503 5.050490 AGCGAACTCGTAGCAAATCATAAT 58.950 37.500 0.51 0.00 42.22 1.28
4077 5504 5.523916 AGCGAACTCGTAGCAAATCATAATT 59.476 36.000 0.51 0.00 42.22 1.40
4078 5505 6.700081 AGCGAACTCGTAGCAAATCATAATTA 59.300 34.615 0.51 0.00 42.22 1.40
4079 5506 7.223971 AGCGAACTCGTAGCAAATCATAATTAA 59.776 33.333 0.51 0.00 42.22 1.40
4080 5507 7.318205 GCGAACTCGTAGCAAATCATAATTAAC 59.682 37.037 0.51 0.00 42.22 2.01
4081 5508 8.540492 CGAACTCGTAGCAAATCATAATTAACT 58.460 33.333 0.00 0.00 34.11 2.24
4082 5509 9.638300 GAACTCGTAGCAAATCATAATTAACTG 57.362 33.333 0.00 0.00 0.00 3.16
4083 5510 7.630924 ACTCGTAGCAAATCATAATTAACTGC 58.369 34.615 0.00 0.00 0.00 4.40
4084 5511 6.954944 TCGTAGCAAATCATAATTAACTGCC 58.045 36.000 0.00 0.00 29.94 4.85
4085 5512 6.765989 TCGTAGCAAATCATAATTAACTGCCT 59.234 34.615 0.00 0.00 29.94 4.75
4086 5513 7.282224 TCGTAGCAAATCATAATTAACTGCCTT 59.718 33.333 0.00 0.00 29.94 4.35
4087 5514 8.556194 CGTAGCAAATCATAATTAACTGCCTTA 58.444 33.333 0.00 0.00 29.94 2.69
4090 5517 7.922811 AGCAAATCATAATTAACTGCCTTAAGC 59.077 33.333 0.00 0.00 44.14 3.09
4102 5529 2.666989 CTTAAGCGAAGGACCGAGC 58.333 57.895 0.00 1.40 0.00 5.03
4103 5530 0.108804 CTTAAGCGAAGGACCGAGCA 60.109 55.000 10.61 0.00 0.00 4.26
4104 5531 0.108804 TTAAGCGAAGGACCGAGCAG 60.109 55.000 10.61 0.00 0.00 4.24
4105 5532 2.558554 TAAGCGAAGGACCGAGCAGC 62.559 60.000 10.61 2.79 0.00 5.25
4107 5534 4.821589 CGAAGGACCGAGCAGCCC 62.822 72.222 0.00 0.00 0.00 5.19
4108 5535 3.394836 GAAGGACCGAGCAGCCCT 61.395 66.667 0.00 0.00 0.00 5.19
4109 5536 3.378399 GAAGGACCGAGCAGCCCTC 62.378 68.421 0.00 0.00 37.22 4.30
4115 5542 3.905678 CGAGCAGCCCTCCGGTAG 61.906 72.222 0.00 0.00 37.27 3.18
4116 5543 4.228567 GAGCAGCCCTCCGGTAGC 62.229 72.222 0.00 2.78 34.35 3.58
4119 5546 4.208686 CAGCCCTCCGGTAGCGTC 62.209 72.222 13.99 0.00 0.00 5.19
4122 5549 2.758737 CCCTCCGGTAGCGTCCTT 60.759 66.667 13.99 0.00 0.00 3.36
4123 5550 2.356780 CCCTCCGGTAGCGTCCTTT 61.357 63.158 13.99 0.00 0.00 3.11
4124 5551 1.039233 CCCTCCGGTAGCGTCCTTTA 61.039 60.000 13.99 0.00 0.00 1.85
4125 5552 0.384669 CCTCCGGTAGCGTCCTTTAG 59.615 60.000 13.99 0.00 0.00 1.85
4126 5553 0.248949 CTCCGGTAGCGTCCTTTAGC 60.249 60.000 13.99 0.00 0.00 3.09
4127 5554 0.966875 TCCGGTAGCGTCCTTTAGCA 60.967 55.000 13.99 0.00 35.48 3.49
4128 5555 0.108520 CCGGTAGCGTCCTTTAGCAA 60.109 55.000 13.99 0.00 35.48 3.91
4129 5556 1.673626 CCGGTAGCGTCCTTTAGCAAA 60.674 52.381 13.99 0.00 35.48 3.68
4130 5557 2.277084 CGGTAGCGTCCTTTAGCAAAT 58.723 47.619 6.07 0.00 35.48 2.32
4131 5558 2.284417 CGGTAGCGTCCTTTAGCAAATC 59.716 50.000 6.07 0.00 35.48 2.17
4132 5559 3.267483 GGTAGCGTCCTTTAGCAAATCA 58.733 45.455 0.00 0.00 35.48 2.57
4133 5560 3.309954 GGTAGCGTCCTTTAGCAAATCAG 59.690 47.826 0.00 0.00 35.48 2.90
4134 5561 1.740025 AGCGTCCTTTAGCAAATCAGC 59.260 47.619 0.00 0.00 35.48 4.26
4135 5562 1.468520 GCGTCCTTTAGCAAATCAGCA 59.531 47.619 0.00 0.00 36.85 4.41
4136 5563 2.729156 GCGTCCTTTAGCAAATCAGCAC 60.729 50.000 0.00 0.00 36.85 4.40
4137 5564 2.159517 CGTCCTTTAGCAAATCAGCACC 60.160 50.000 0.00 0.00 36.85 5.01
4138 5565 2.083774 TCCTTTAGCAAATCAGCACCG 58.916 47.619 0.00 0.00 36.85 4.94
4139 5566 1.812571 CCTTTAGCAAATCAGCACCGT 59.187 47.619 0.00 0.00 36.85 4.83
4140 5567 2.228822 CCTTTAGCAAATCAGCACCGTT 59.771 45.455 0.00 0.00 36.85 4.44
4141 5568 3.305335 CCTTTAGCAAATCAGCACCGTTT 60.305 43.478 0.00 0.00 36.85 3.60
4142 5569 4.083003 CCTTTAGCAAATCAGCACCGTTTA 60.083 41.667 0.00 0.00 36.85 2.01
4143 5570 5.440234 TTTAGCAAATCAGCACCGTTTAA 57.560 34.783 0.00 0.00 36.85 1.52
4144 5571 3.559238 AGCAAATCAGCACCGTTTAAG 57.441 42.857 0.00 0.00 36.85 1.85
4145 5572 3.146066 AGCAAATCAGCACCGTTTAAGA 58.854 40.909 0.00 0.00 36.85 2.10
4146 5573 3.758554 AGCAAATCAGCACCGTTTAAGAT 59.241 39.130 0.00 0.00 36.85 2.40
4147 5574 3.853671 GCAAATCAGCACCGTTTAAGATG 59.146 43.478 0.00 0.00 0.00 2.90
4148 5575 4.414852 CAAATCAGCACCGTTTAAGATGG 58.585 43.478 0.00 0.00 40.53 3.51
4149 5576 3.627395 ATCAGCACCGTTTAAGATGGA 57.373 42.857 0.00 0.00 37.88 3.41
4150 5577 2.695359 TCAGCACCGTTTAAGATGGAC 58.305 47.619 0.00 0.00 37.88 4.02
4151 5578 1.393539 CAGCACCGTTTAAGATGGACG 59.606 52.381 0.00 0.00 37.88 4.79
4152 5579 1.001633 AGCACCGTTTAAGATGGACGT 59.998 47.619 0.00 0.00 37.88 4.34
4153 5580 1.127951 GCACCGTTTAAGATGGACGTG 59.872 52.381 0.00 0.00 37.88 4.49
4154 5581 2.679450 CACCGTTTAAGATGGACGTGA 58.321 47.619 0.00 0.00 37.88 4.35
4155 5582 3.259064 CACCGTTTAAGATGGACGTGAT 58.741 45.455 0.00 0.00 37.88 3.06
4156 5583 3.306166 CACCGTTTAAGATGGACGTGATC 59.694 47.826 0.00 0.00 37.88 2.92
4157 5584 2.534349 CCGTTTAAGATGGACGTGATCG 59.466 50.000 0.00 0.00 43.34 3.69
4158 5585 3.431856 CGTTTAAGATGGACGTGATCGA 58.568 45.455 0.00 0.00 40.62 3.59
4159 5586 3.482472 CGTTTAAGATGGACGTGATCGAG 59.518 47.826 0.00 0.00 40.62 4.04
4160 5587 4.669318 GTTTAAGATGGACGTGATCGAGA 58.331 43.478 0.00 0.00 40.62 4.04
4161 5588 5.282510 GTTTAAGATGGACGTGATCGAGAT 58.717 41.667 0.00 0.00 40.62 2.75
4162 5589 5.515797 TTAAGATGGACGTGATCGAGATT 57.484 39.130 0.00 0.00 40.62 2.40
4163 5590 4.392921 AAGATGGACGTGATCGAGATTT 57.607 40.909 0.00 0.00 40.62 2.17
4164 5591 3.971150 AGATGGACGTGATCGAGATTTC 58.029 45.455 0.00 0.00 40.62 2.17
4166 5593 1.471287 TGGACGTGATCGAGATTTCGT 59.529 47.619 5.47 13.07 46.72 3.85
4167 5594 2.110226 GGACGTGATCGAGATTTCGTC 58.890 52.381 22.48 22.48 46.72 4.20
4168 5595 2.110226 GACGTGATCGAGATTTCGTCC 58.890 52.381 21.22 0.00 46.72 4.79
4169 5596 1.113253 CGTGATCGAGATTTCGTCCG 58.887 55.000 5.47 5.51 46.72 4.79
4170 5597 1.531264 CGTGATCGAGATTTCGTCCGT 60.531 52.381 5.47 0.00 46.72 4.69
4171 5598 1.846782 GTGATCGAGATTTCGTCCGTG 59.153 52.381 5.47 0.00 46.72 4.94
4172 5599 0.847035 GATCGAGATTTCGTCCGTGC 59.153 55.000 5.47 0.00 46.72 5.34
4173 5600 0.172578 ATCGAGATTTCGTCCGTGCA 59.827 50.000 5.47 0.00 46.72 4.57
4174 5601 0.731514 TCGAGATTTCGTCCGTGCAC 60.732 55.000 6.82 6.82 46.72 4.57
4175 5602 1.683790 CGAGATTTCGTCCGTGCACC 61.684 60.000 12.15 0.00 41.84 5.01
4176 5603 1.683790 GAGATTTCGTCCGTGCACCG 61.684 60.000 12.15 9.55 0.00 4.94
4177 5604 2.025418 GATTTCGTCCGTGCACCGT 61.025 57.895 12.15 0.00 33.66 4.83
4178 5605 1.952266 GATTTCGTCCGTGCACCGTC 61.952 60.000 12.15 1.54 33.66 4.79
4179 5606 4.986587 TTCGTCCGTGCACCGTCG 62.987 66.667 12.15 14.40 34.79 5.12
4182 5609 4.936823 GTCCGTGCACCGTCGTGT 62.937 66.667 12.15 0.00 42.39 4.49
4183 5610 4.934942 TCCGTGCACCGTCGTGTG 62.935 66.667 12.15 8.85 42.39 3.82
4189 5616 4.000557 CACCGTCGTGTGCACAGC 62.001 66.667 22.40 14.14 35.10 4.40
4190 5617 4.522689 ACCGTCGTGTGCACAGCA 62.523 61.111 22.40 6.68 35.60 4.41
4191 5618 3.705638 CCGTCGTGTGCACAGCAG 61.706 66.667 22.40 14.88 40.08 4.24
4192 5619 2.961721 CGTCGTGTGCACAGCAGT 60.962 61.111 22.40 0.00 40.08 4.40
4193 5620 2.525248 CGTCGTGTGCACAGCAGTT 61.525 57.895 22.40 0.00 40.08 3.16
4194 5621 1.721487 GTCGTGTGCACAGCAGTTT 59.279 52.632 22.40 0.00 40.08 2.66
4195 5622 0.316196 GTCGTGTGCACAGCAGTTTC 60.316 55.000 22.40 5.45 40.08 2.78
4196 5623 1.368019 CGTGTGCACAGCAGTTTCG 60.368 57.895 22.40 14.60 40.08 3.46
4197 5624 1.761244 CGTGTGCACAGCAGTTTCGA 61.761 55.000 22.40 0.00 40.08 3.71
4198 5625 0.041839 GTGTGCACAGCAGTTTCGAG 60.042 55.000 22.40 0.00 40.08 4.04
4199 5626 1.159713 TGTGCACAGCAGTTTCGAGG 61.160 55.000 17.42 0.00 40.08 4.63
4200 5627 2.253758 TGCACAGCAGTTTCGAGGC 61.254 57.895 0.00 0.00 33.32 4.70
4201 5628 2.253758 GCACAGCAGTTTCGAGGCA 61.254 57.895 3.83 0.00 0.00 4.75
4202 5629 1.785041 GCACAGCAGTTTCGAGGCAA 61.785 55.000 3.83 0.00 0.00 4.52
4203 5630 0.662619 CACAGCAGTTTCGAGGCAAA 59.337 50.000 3.83 0.00 0.00 3.68
4204 5631 1.065401 CACAGCAGTTTCGAGGCAAAA 59.935 47.619 3.83 0.00 0.00 2.44
4205 5632 1.065551 ACAGCAGTTTCGAGGCAAAAC 59.934 47.619 3.83 2.97 36.97 2.43
4206 5633 1.334869 CAGCAGTTTCGAGGCAAAACT 59.665 47.619 6.80 6.80 45.41 2.66
4207 5634 2.548057 CAGCAGTTTCGAGGCAAAACTA 59.452 45.455 10.89 0.00 43.31 2.24
4208 5635 3.003275 CAGCAGTTTCGAGGCAAAACTAA 59.997 43.478 10.89 0.00 43.31 2.24
4209 5636 3.821033 AGCAGTTTCGAGGCAAAACTAAT 59.179 39.130 10.89 2.95 43.31 1.73
4210 5637 4.278419 AGCAGTTTCGAGGCAAAACTAATT 59.722 37.500 10.89 0.00 43.31 1.40
4211 5638 4.982295 GCAGTTTCGAGGCAAAACTAATTT 59.018 37.500 10.89 0.00 43.31 1.82
4212 5639 5.462068 GCAGTTTCGAGGCAAAACTAATTTT 59.538 36.000 10.89 0.00 43.31 1.82
4213 5640 6.639279 GCAGTTTCGAGGCAAAACTAATTTTA 59.361 34.615 10.89 0.00 43.31 1.52
4214 5641 7.148967 GCAGTTTCGAGGCAAAACTAATTTTAG 60.149 37.037 10.89 0.00 43.31 1.85
4215 5642 8.073768 CAGTTTCGAGGCAAAACTAATTTTAGA 58.926 33.333 10.89 0.00 43.31 2.10
4216 5643 8.290325 AGTTTCGAGGCAAAACTAATTTTAGAG 58.710 33.333 9.91 0.00 43.33 2.43
4217 5644 7.972832 TTCGAGGCAAAACTAATTTTAGAGA 57.027 32.000 4.40 0.00 35.79 3.10
4218 5645 7.596749 TCGAGGCAAAACTAATTTTAGAGAG 57.403 36.000 4.40 0.00 35.79 3.20
4219 5646 7.383687 TCGAGGCAAAACTAATTTTAGAGAGA 58.616 34.615 4.40 0.00 35.79 3.10
4220 5647 7.876068 TCGAGGCAAAACTAATTTTAGAGAGAA 59.124 33.333 4.40 0.00 35.79 2.87
4221 5648 8.504005 CGAGGCAAAACTAATTTTAGAGAGAAA 58.496 33.333 4.40 0.00 35.79 2.52
4230 5657 8.961634 ACTAATTTTAGAGAGAAAAAGCATCCC 58.038 33.333 4.40 0.00 32.29 3.85
4231 5658 7.781324 AATTTTAGAGAGAAAAAGCATCCCA 57.219 32.000 0.00 0.00 32.29 4.37
4232 5659 7.781324 ATTTTAGAGAGAAAAAGCATCCCAA 57.219 32.000 0.00 0.00 32.29 4.12
4233 5660 7.595819 TTTTAGAGAGAAAAAGCATCCCAAA 57.404 32.000 0.00 0.00 0.00 3.28
4234 5661 6.575162 TTAGAGAGAAAAAGCATCCCAAAC 57.425 37.500 0.00 0.00 0.00 2.93
4235 5662 4.473444 AGAGAGAAAAAGCATCCCAAACA 58.527 39.130 0.00 0.00 0.00 2.83
4236 5663 5.082425 AGAGAGAAAAAGCATCCCAAACAT 58.918 37.500 0.00 0.00 0.00 2.71
4237 5664 5.047519 AGAGAGAAAAAGCATCCCAAACATG 60.048 40.000 0.00 0.00 0.00 3.21
4238 5665 4.590222 AGAGAAAAAGCATCCCAAACATGT 59.410 37.500 0.00 0.00 0.00 3.21
4239 5666 5.070847 AGAGAAAAAGCATCCCAAACATGTT 59.929 36.000 4.92 4.92 0.00 2.71
4240 5667 5.683681 AGAAAAAGCATCCCAAACATGTTT 58.316 33.333 18.13 18.13 0.00 2.83
4241 5668 5.528320 AGAAAAAGCATCCCAAACATGTTTG 59.472 36.000 34.51 34.51 46.93 2.93
4255 5682 6.670695 AACATGTTTGAGAAAAATAGGGCT 57.329 33.333 4.92 0.00 0.00 5.19
4256 5683 6.670695 ACATGTTTGAGAAAAATAGGGCTT 57.329 33.333 0.00 0.00 0.00 4.35
4257 5684 6.458210 ACATGTTTGAGAAAAATAGGGCTTG 58.542 36.000 0.00 0.00 0.00 4.01
4258 5685 4.881920 TGTTTGAGAAAAATAGGGCTTGC 58.118 39.130 0.00 0.00 0.00 4.01
4259 5686 4.343526 TGTTTGAGAAAAATAGGGCTTGCA 59.656 37.500 0.00 0.00 0.00 4.08
4260 5687 4.519540 TTGAGAAAAATAGGGCTTGCAC 57.480 40.909 0.00 0.00 0.00 4.57
4261 5688 2.825532 TGAGAAAAATAGGGCTTGCACC 59.174 45.455 0.00 0.00 0.00 5.01
4262 5689 1.818674 AGAAAAATAGGGCTTGCACCG 59.181 47.619 0.00 0.00 0.00 4.94
4263 5690 0.894835 AAAAATAGGGCTTGCACCGG 59.105 50.000 0.00 0.00 0.00 5.28
4264 5691 0.251608 AAAATAGGGCTTGCACCGGT 60.252 50.000 0.00 0.00 0.00 5.28
4265 5692 0.965363 AAATAGGGCTTGCACCGGTG 60.965 55.000 30.66 30.66 0.00 4.94
4266 5693 2.137177 AATAGGGCTTGCACCGGTGT 62.137 55.000 33.92 16.10 0.00 4.16
4267 5694 1.268992 ATAGGGCTTGCACCGGTGTA 61.269 55.000 33.92 28.63 0.00 2.90
4268 5695 1.481901 TAGGGCTTGCACCGGTGTAA 61.482 55.000 32.02 32.02 34.18 2.41
4269 5696 1.677633 GGGCTTGCACCGGTGTAAT 60.678 57.895 33.78 0.00 34.80 1.89
4270 5697 1.654023 GGGCTTGCACCGGTGTAATC 61.654 60.000 33.78 29.38 34.80 1.75
4271 5698 0.676782 GGCTTGCACCGGTGTAATCT 60.677 55.000 33.78 0.00 34.80 2.40
4272 5699 1.406341 GGCTTGCACCGGTGTAATCTA 60.406 52.381 33.78 15.72 34.80 1.98
4273 5700 2.561569 GCTTGCACCGGTGTAATCTAT 58.438 47.619 33.78 0.00 34.80 1.98
4274 5701 2.943033 GCTTGCACCGGTGTAATCTATT 59.057 45.455 33.78 0.00 34.80 1.73
4275 5702 3.377172 GCTTGCACCGGTGTAATCTATTT 59.623 43.478 33.78 0.00 34.80 1.40
4276 5703 4.142469 GCTTGCACCGGTGTAATCTATTTT 60.142 41.667 33.78 0.00 34.80 1.82
4277 5704 4.955925 TGCACCGGTGTAATCTATTTTG 57.044 40.909 33.92 5.95 0.00 2.44
4278 5705 4.328536 TGCACCGGTGTAATCTATTTTGT 58.671 39.130 33.92 0.00 0.00 2.83
4279 5706 4.393680 TGCACCGGTGTAATCTATTTTGTC 59.606 41.667 33.92 13.58 0.00 3.18
4280 5707 4.393680 GCACCGGTGTAATCTATTTTGTCA 59.606 41.667 33.92 0.00 0.00 3.58
4281 5708 5.106475 GCACCGGTGTAATCTATTTTGTCAA 60.106 40.000 33.92 0.00 0.00 3.18
4282 5709 6.311723 CACCGGTGTAATCTATTTTGTCAAC 58.688 40.000 26.95 0.00 0.00 3.18
4283 5710 6.148811 CACCGGTGTAATCTATTTTGTCAACT 59.851 38.462 26.95 0.00 0.00 3.16
4284 5711 6.713450 ACCGGTGTAATCTATTTTGTCAACTT 59.287 34.615 6.12 0.00 0.00 2.66
4285 5712 7.879160 ACCGGTGTAATCTATTTTGTCAACTTA 59.121 33.333 6.12 0.00 0.00 2.24
4286 5713 8.388103 CCGGTGTAATCTATTTTGTCAACTTAG 58.612 37.037 0.00 0.00 0.00 2.18
4287 5714 7.903431 CGGTGTAATCTATTTTGTCAACTTAGC 59.097 37.037 0.00 0.00 0.00 3.09
4288 5715 8.182227 GGTGTAATCTATTTTGTCAACTTAGCC 58.818 37.037 0.00 0.00 0.00 3.93
4289 5716 7.903431 GTGTAATCTATTTTGTCAACTTAGCCG 59.097 37.037 0.00 0.00 0.00 5.52
4290 5717 7.604927 TGTAATCTATTTTGTCAACTTAGCCGT 59.395 33.333 0.00 0.00 0.00 5.68
4291 5718 9.090692 GTAATCTATTTTGTCAACTTAGCCGTA 57.909 33.333 0.00 0.00 0.00 4.02
4292 5719 8.556213 AATCTATTTTGTCAACTTAGCCGTAA 57.444 30.769 0.00 0.00 0.00 3.18
4293 5720 8.732746 ATCTATTTTGTCAACTTAGCCGTAAT 57.267 30.769 0.00 0.00 0.00 1.89
4294 5721 8.556213 TCTATTTTGTCAACTTAGCCGTAATT 57.444 30.769 0.00 0.00 0.00 1.40
4295 5722 9.656040 TCTATTTTGTCAACTTAGCCGTAATTA 57.344 29.630 0.00 0.00 0.00 1.40
4300 5727 7.416154 TGTCAACTTAGCCGTAATTATATGC 57.584 36.000 0.00 0.00 0.00 3.14
4301 5728 6.987404 TGTCAACTTAGCCGTAATTATATGCA 59.013 34.615 0.00 0.00 0.00 3.96
4302 5729 7.496263 TGTCAACTTAGCCGTAATTATATGCAA 59.504 33.333 0.00 0.00 0.00 4.08
4303 5730 8.009974 GTCAACTTAGCCGTAATTATATGCAAG 58.990 37.037 0.00 8.98 0.00 4.01
4304 5731 7.713507 TCAACTTAGCCGTAATTATATGCAAGT 59.286 33.333 0.00 9.40 0.00 3.16
4305 5732 8.984764 CAACTTAGCCGTAATTATATGCAAGTA 58.015 33.333 0.00 0.00 0.00 2.24
4306 5733 9.720769 AACTTAGCCGTAATTATATGCAAGTAT 57.279 29.630 0.00 0.00 0.00 2.12
4311 5738 9.151471 AGCCGTAATTATATGCAAGTATACAAG 57.849 33.333 5.50 0.00 0.00 3.16
4312 5739 8.932791 GCCGTAATTATATGCAAGTATACAAGT 58.067 33.333 5.50 0.00 0.00 3.16
4321 5748 9.760077 ATATGCAAGTATACAAGTTACCACTAC 57.240 33.333 5.50 0.00 30.68 2.73
4322 5749 7.235935 TGCAAGTATACAAGTTACCACTACT 57.764 36.000 5.50 0.00 30.68 2.57
4323 5750 7.094631 TGCAAGTATACAAGTTACCACTACTG 58.905 38.462 5.50 0.00 30.68 2.74
4324 5751 7.039574 TGCAAGTATACAAGTTACCACTACTGA 60.040 37.037 5.50 0.00 30.68 3.41
4325 5752 7.816031 GCAAGTATACAAGTTACCACTACTGAA 59.184 37.037 5.50 0.00 30.68 3.02
4326 5753 9.701098 CAAGTATACAAGTTACCACTACTGAAA 57.299 33.333 5.50 0.00 30.68 2.69
4346 5773 2.825861 AAATCGTGTGGTTACCGAGT 57.174 45.000 0.00 0.00 34.58 4.18
4347 5774 2.825861 AATCGTGTGGTTACCGAGTT 57.174 45.000 0.00 0.00 34.58 3.01
4348 5775 2.825861 ATCGTGTGGTTACCGAGTTT 57.174 45.000 0.00 0.00 34.58 2.66
4349 5776 2.600470 TCGTGTGGTTACCGAGTTTT 57.400 45.000 0.00 0.00 0.00 2.43
4350 5777 2.903798 TCGTGTGGTTACCGAGTTTTT 58.096 42.857 0.00 0.00 0.00 1.94
4378 5805 2.503061 CCATGCGTGGCTAGCTCT 59.497 61.111 13.11 0.00 39.01 4.09
4405 5832 2.943978 CGTCACCACCACCTCCTCC 61.944 68.421 0.00 0.00 0.00 4.30
4406 5833 2.203938 TCACCACCACCTCCTCCC 60.204 66.667 0.00 0.00 0.00 4.30
4407 5834 3.706373 CACCACCACCTCCTCCCG 61.706 72.222 0.00 0.00 0.00 5.14
4410 5837 3.775654 CACCACCTCCTCCCGCTC 61.776 72.222 0.00 0.00 0.00 5.03
4412 5839 4.787280 CCACCTCCTCCCGCTCCT 62.787 72.222 0.00 0.00 0.00 3.69
4413 5840 2.685380 CACCTCCTCCCGCTCCTT 60.685 66.667 0.00 0.00 0.00 3.36
4417 5844 4.798682 TCCTCCCGCTCCTTCCCC 62.799 72.222 0.00 0.00 0.00 4.81
4453 5880 4.069232 CCGAAGGCGTCAGAGGCA 62.069 66.667 16.73 0.00 46.14 4.75
4455 5882 1.448540 CGAAGGCGTCAGAGGCATT 60.449 57.895 14.46 14.46 35.63 3.56
4456 5883 1.021390 CGAAGGCGTCAGAGGCATTT 61.021 55.000 15.55 9.61 32.99 2.32
4468 5895 2.560861 GCATTTGCGTCTGCGGAA 59.439 55.556 0.00 0.00 46.23 4.30
4532 5959 4.715523 AACACATGGTCGGGGCGG 62.716 66.667 0.00 0.00 0.00 6.13
4566 5993 2.942879 GACGCATGCCACGAACAA 59.057 55.556 13.15 0.00 0.00 2.83
4570 5997 1.210155 GCATGCCACGAACAAGGAC 59.790 57.895 6.36 0.00 0.00 3.85
4573 6000 0.108585 ATGCCACGAACAAGGACAGT 59.891 50.000 0.00 0.00 0.00 3.55
4583 6010 1.913762 AAGGACAGTGAGACGGGGG 60.914 63.158 0.00 0.00 0.00 5.40
4614 6047 1.484240 CAGAGAGGGGAAAAGCTCGAT 59.516 52.381 0.00 0.00 32.80 3.59
4615 6048 2.695666 CAGAGAGGGGAAAAGCTCGATA 59.304 50.000 0.00 0.00 32.80 2.92
4645 6078 2.033602 GGCGGCAACCACCTTACT 59.966 61.111 3.07 0.00 0.00 2.24
4717 6150 4.150454 CCTCCTCCTCCTCCGCCT 62.150 72.222 0.00 0.00 0.00 5.52
4718 6151 2.769120 CCTCCTCCTCCTCCGCCTA 61.769 68.421 0.00 0.00 0.00 3.93
4719 6152 1.228429 CTCCTCCTCCTCCGCCTAG 60.228 68.421 0.00 0.00 0.00 3.02
4720 6153 1.696674 TCCTCCTCCTCCGCCTAGA 60.697 63.158 0.00 0.00 0.00 2.43
4721 6154 1.228429 CCTCCTCCTCCGCCTAGAG 60.228 68.421 0.00 0.00 0.00 2.43
4722 6155 1.710996 CCTCCTCCTCCGCCTAGAGA 61.711 65.000 0.00 0.00 35.82 3.10
4723 6156 0.250727 CTCCTCCTCCGCCTAGAGAG 60.251 65.000 0.00 0.00 35.82 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 1.305219 AATGTGTTCGCATGACGGGG 61.305 55.000 0.00 0.00 43.89 5.73
37 38 2.233355 GTCAAATGTGTTCGCATGACG 58.767 47.619 0.00 0.00 45.62 4.35
106 107 2.093921 GCTTCTCCTGAGGTCAAGGTAC 60.094 54.545 12.14 0.00 0.00 3.34
153 154 4.320788 CCAGTCAGGTCTCATTTTTCTTGC 60.321 45.833 0.00 0.00 0.00 4.01
189 194 4.050553 CACTGCCACAACATTTAAACCAG 58.949 43.478 0.00 0.00 0.00 4.00
205 210 0.737219 GCCATGAATGTCTCACTGCC 59.263 55.000 0.00 0.00 36.69 4.85
235 240 2.180159 TAGCCGCAAACCTGACCTCC 62.180 60.000 0.00 0.00 0.00 4.30
240 245 1.192146 ACTCCTAGCCGCAAACCTGA 61.192 55.000 0.00 0.00 0.00 3.86
250 255 4.894114 TCTACTCCATTGTTACTCCTAGCC 59.106 45.833 0.00 0.00 0.00 3.93
260 265 0.892755 TCCGCGTCTACTCCATTGTT 59.107 50.000 4.92 0.00 0.00 2.83
270 275 0.463295 CTCCTACACCTCCGCGTCTA 60.463 60.000 4.92 0.00 0.00 2.59
273 278 0.747283 CTACTCCTACACCTCCGCGT 60.747 60.000 4.92 0.00 0.00 6.01
274 279 0.747283 ACTACTCCTACACCTCCGCG 60.747 60.000 0.00 0.00 0.00 6.46
275 280 2.338577 TACTACTCCTACACCTCCGC 57.661 55.000 0.00 0.00 0.00 5.54
277 282 3.629087 TGCTTACTACTCCTACACCTCC 58.371 50.000 0.00 0.00 0.00 4.30
278 283 3.067040 GCTGCTTACTACTCCTACACCTC 59.933 52.174 0.00 0.00 0.00 3.85
279 284 3.025262 GCTGCTTACTACTCCTACACCT 58.975 50.000 0.00 0.00 0.00 4.00
281 286 3.735514 GCTGCTGCTTACTACTCCTACAC 60.736 52.174 8.53 0.00 36.03 2.90
285 290 1.480137 CTGCTGCTGCTTACTACTCCT 59.520 52.381 17.00 0.00 40.48 3.69
286 291 1.933247 CTGCTGCTGCTTACTACTCC 58.067 55.000 17.00 0.00 40.48 3.85
287 292 1.285578 GCTGCTGCTGCTTACTACTC 58.714 55.000 22.10 0.00 40.48 2.59
288 293 0.610174 TGCTGCTGCTGCTTACTACT 59.390 50.000 27.67 0.00 40.48 2.57
316 342 2.434702 ACCATACGGATCTCCTTCCAAC 59.565 50.000 0.00 0.00 35.34 3.77
321 347 1.762957 CCACACCATACGGATCTCCTT 59.237 52.381 0.00 0.00 35.59 3.36
333 359 0.606604 GTACGGACACTCCACACCAT 59.393 55.000 0.00 0.00 35.91 3.55
344 378 3.376078 GGGACGCAGGTACGGACA 61.376 66.667 0.00 0.00 37.37 4.02
530 564 3.522731 CTCACCCGCCTCCTCTCG 61.523 72.222 0.00 0.00 0.00 4.04
552 586 4.436998 CCTGGTCGCCGTCACCTC 62.437 72.222 0.00 0.00 34.66 3.85
664 1168 4.744795 TCTACTCCTCCTGCATTTTCTC 57.255 45.455 0.00 0.00 0.00 2.87
669 1173 4.851639 AAACATCTACTCCTCCTGCATT 57.148 40.909 0.00 0.00 0.00 3.56
718 1230 1.436336 GGTCCGGTCGATGGTGTAG 59.564 63.158 0.00 0.00 0.00 2.74
742 1254 0.252103 AAGGAGAACCGAGGTAGCCA 60.252 55.000 0.00 0.00 41.83 4.75
811 1326 2.504244 GTTCGACGGAGGAGCACG 60.504 66.667 0.00 0.00 0.00 5.34
960 1475 3.563224 TCAGTGGCTGGCTGCAGT 61.563 61.111 16.64 4.74 45.15 4.40
964 1479 3.947132 CTCGGTCAGTGGCTGGCTG 62.947 68.421 3.17 3.37 43.13 4.85
965 1480 3.699894 CTCGGTCAGTGGCTGGCT 61.700 66.667 3.17 0.00 36.22 4.75
967 1482 3.699894 AGCTCGGTCAGTGGCTGG 61.700 66.667 3.17 0.00 33.50 4.85
986 1501 2.430332 CTCGCCATCTCTTCTTCCTCTT 59.570 50.000 0.00 0.00 0.00 2.85
1203 1743 2.203938 TTGGAGGACGGAAGGGCT 60.204 61.111 0.00 0.00 0.00 5.19
1206 1746 0.250513 CCTTCTTGGAGGACGGAAGG 59.749 60.000 6.25 6.25 45.49 3.46
1209 1749 1.076677 AGTACCTTCTTGGAGGACGGA 59.923 52.381 1.27 0.00 39.25 4.69
1213 1753 2.897969 GTCACAGTACCTTCTTGGAGGA 59.102 50.000 1.27 0.00 39.25 3.71
1233 1773 3.450457 CCTAACCAGATGAGCAGAAGAGT 59.550 47.826 0.00 0.00 0.00 3.24
1234 1774 3.703556 TCCTAACCAGATGAGCAGAAGAG 59.296 47.826 0.00 0.00 0.00 2.85
1256 1810 1.977293 GCCGGCTCAGAATTCTCCCT 61.977 60.000 22.15 0.00 0.00 4.20
1260 1814 0.835941 ATCAGCCGGCTCAGAATTCT 59.164 50.000 30.29 3.62 0.00 2.40
1272 1826 0.735471 TCTCTCGACTTCATCAGCCG 59.265 55.000 0.00 0.00 0.00 5.52
1275 1829 6.471841 CACATAAACTCTCTCGACTTCATCAG 59.528 42.308 0.00 0.00 0.00 2.90
1291 1845 6.208599 CACCTAAAATCCCACACACATAAACT 59.791 38.462 0.00 0.00 0.00 2.66
1292 1846 6.386654 CACCTAAAATCCCACACACATAAAC 58.613 40.000 0.00 0.00 0.00 2.01
1415 1969 3.738281 GCAGCAGATTTACCTCGAGCTTA 60.738 47.826 6.99 0.00 31.83 3.09
1417 1971 1.472376 GCAGCAGATTTACCTCGAGCT 60.472 52.381 6.99 0.00 33.58 4.09
1431 1985 0.745845 ATCCGCCTAAGTTGCAGCAG 60.746 55.000 2.55 0.00 0.00 4.24
1432 1986 0.322456 AATCCGCCTAAGTTGCAGCA 60.322 50.000 2.55 0.00 0.00 4.41
1433 1987 0.378610 GAATCCGCCTAAGTTGCAGC 59.621 55.000 0.00 0.00 0.00 5.25
1437 1991 0.373716 GCACGAATCCGCCTAAGTTG 59.626 55.000 0.00 0.00 39.95 3.16
1442 1996 0.671163 AAAACGCACGAATCCGCCTA 60.671 50.000 0.00 0.00 39.95 3.93
1476 2030 2.746362 CTCACACTCAGAGCAATTTCCC 59.254 50.000 0.00 0.00 0.00 3.97
1490 2045 3.692257 AAGCAGTTCATAGCTCACACT 57.308 42.857 0.00 0.00 40.90 3.55
1491 2046 4.328440 CAGTAAGCAGTTCATAGCTCACAC 59.672 45.833 0.00 0.00 40.90 3.82
1492 2047 4.498241 CAGTAAGCAGTTCATAGCTCACA 58.502 43.478 0.00 0.00 40.90 3.58
1493 2048 3.308323 GCAGTAAGCAGTTCATAGCTCAC 59.692 47.826 0.00 0.00 44.79 3.51
1544 2112 0.169672 CTGGCGGTGAAGCAGATTTG 59.830 55.000 0.00 0.00 39.27 2.32
1563 2131 1.958417 GCATTTTGCATTGCACTTGC 58.042 45.000 11.66 15.88 44.26 4.01
1576 2144 8.673711 TGAGTCGCATTATTTACTTAGCATTTT 58.326 29.630 0.00 0.00 0.00 1.82
1587 2182 8.727910 AGTATACGATCTGAGTCGCATTATTTA 58.272 33.333 0.00 0.00 45.12 1.40
1643 2238 6.912203 TCTGTTTGATAACTGTTTCGTTGA 57.088 33.333 0.00 0.00 35.44 3.18
1648 2243 6.446318 TGCCAATCTGTTTGATAACTGTTTC 58.554 36.000 0.00 0.00 37.53 2.78
1670 2265 5.725110 ATTCATACTGTCGTTCAGATTGC 57.275 39.130 14.79 0.00 46.27 3.56
1677 2272 4.876107 ACCATCCAATTCATACTGTCGTTC 59.124 41.667 0.00 0.00 0.00 3.95
1724 2319 5.059833 AGTCAATTTCTCCACTGAGTCAAC 58.940 41.667 0.00 0.00 39.75 3.18
1727 2322 5.146010 AGAGTCAATTTCTCCACTGAGTC 57.854 43.478 0.00 0.00 39.75 3.36
1732 2327 7.993183 TGAACTAAAAGAGTCAATTTCTCCACT 59.007 33.333 0.00 0.00 37.44 4.00
1734 2329 8.924511 ATGAACTAAAAGAGTCAATTTCTCCA 57.075 30.769 0.00 0.00 37.44 3.86
1753 2348 9.003658 GCTACATGTGGCTATAAATTATGAACT 57.996 33.333 25.31 0.00 34.00 3.01
1770 2365 5.482908 AGGAAACAGAACTAGCTACATGTG 58.517 41.667 9.11 0.00 0.00 3.21
1826 2429 6.401394 TCACACCTACTGAAGATGAATTCTG 58.599 40.000 7.05 0.00 33.93 3.02
1831 2434 7.323420 CAAGTATCACACCTACTGAAGATGAA 58.677 38.462 0.00 0.00 30.00 2.57
1888 2510 5.119588 CACAAGCTGCAAAATACTTTGATGG 59.880 40.000 0.00 0.00 44.03 3.51
2214 2840 5.068198 ACAGAAATAATGGTGCTGCCTTATG 59.932 40.000 0.00 0.00 38.35 1.90
2251 2877 7.767261 AGTTTTGTTCAGTAAAGCACAACATA 58.233 30.769 0.00 0.00 0.00 2.29
2252 2878 6.630071 AGTTTTGTTCAGTAAAGCACAACAT 58.370 32.000 0.00 0.00 0.00 2.71
2253 2879 6.019779 AGTTTTGTTCAGTAAAGCACAACA 57.980 33.333 0.00 0.00 0.00 3.33
2262 2888 9.233649 TCACCTAAAAAGAGTTTTGTTCAGTAA 57.766 29.630 0.00 0.00 37.51 2.24
2263 2889 8.795842 TCACCTAAAAAGAGTTTTGTTCAGTA 57.204 30.769 0.00 0.00 37.51 2.74
2395 3021 1.444933 TTGGAACTGGTGGTGGATCT 58.555 50.000 0.00 0.00 0.00 2.75
2426 3052 0.110486 GGGGCAGAAACAAGACTGGA 59.890 55.000 0.00 0.00 35.05 3.86
2610 3237 4.601420 ACCAAAATTTGCCCCTATTTCCTT 59.399 37.500 0.00 0.00 0.00 3.36
2632 3259 3.067180 CCATGTCCATATTTGACCTGCAC 59.933 47.826 0.00 0.00 30.03 4.57
2635 3262 6.537355 AGTATCCATGTCCATATTTGACCTG 58.463 40.000 0.00 1.60 31.60 4.00
2671 3298 6.201234 GGAAAGATAACAGATAAAGCTCGACC 59.799 42.308 0.00 0.00 0.00 4.79
2777 3404 7.124298 TGTGGTCTAGTGTTCTGCTCTTAATAT 59.876 37.037 0.00 0.00 0.00 1.28
2820 3454 6.393990 ACTGAATTTACTAGACAGCAGACAG 58.606 40.000 0.00 0.00 32.67 3.51
2865 3524 5.008619 TGGAATTTGTATCAATGCGCATT 57.991 34.783 29.36 29.36 0.00 3.56
2946 3606 3.482156 AGTATCTGCTTACATGGCTGG 57.518 47.619 0.00 0.00 0.00 4.85
3011 3771 4.580167 ACAACTTACAAGCAGAGCATTCAA 59.420 37.500 0.00 0.00 0.00 2.69
3058 4080 8.041323 TCTCAAAACCTAACATCCAGATACTTC 58.959 37.037 0.00 0.00 0.00 3.01
3077 4099 1.412343 GCCTGCAAAGGGTTCTCAAAA 59.588 47.619 0.00 0.00 0.00 2.44
3079 4101 0.106268 TGCCTGCAAAGGGTTCTCAA 60.106 50.000 0.00 0.00 0.00 3.02
3082 4104 1.620323 GAAATGCCTGCAAAGGGTTCT 59.380 47.619 0.00 0.00 0.00 3.01
3087 4109 3.444742 TGTATCAGAAATGCCTGCAAAGG 59.555 43.478 0.00 0.00 34.28 3.11
3088 4110 4.418392 GTGTATCAGAAATGCCTGCAAAG 58.582 43.478 0.00 0.00 34.28 2.77
3092 4117 2.009774 ACGTGTATCAGAAATGCCTGC 58.990 47.619 0.00 0.00 34.28 4.85
3095 4120 4.882671 ATTGACGTGTATCAGAAATGCC 57.117 40.909 0.00 0.00 0.00 4.40
3106 4131 7.921214 TCCTGCAATTTTTAAAATTGACGTGTA 59.079 29.630 33.83 17.42 39.36 2.90
3136 4161 0.038310 CAAAGGGTTCTCCAGGGACC 59.962 60.000 0.00 0.00 38.24 4.46
3137 4162 0.609406 GCAAAGGGTTCTCCAGGGAC 60.609 60.000 0.00 0.00 38.24 4.46
3142 4167 0.106268 TTGCTGCAAAGGGTTCTCCA 60.106 50.000 13.51 0.00 38.24 3.86
3166 4197 3.134262 TCTCCATCTCAGCATCCTTTGAG 59.866 47.826 0.00 0.00 41.67 3.02
3302 4693 1.075601 TCTTCATGTTTGGGGCTCCT 58.924 50.000 3.07 0.00 0.00 3.69
3545 4953 4.692228 TGTTTTTCAGAATGTTTCCCTGC 58.308 39.130 0.00 0.00 37.40 4.85
3732 5142 3.689161 CGAACCAATTTGAGGATGCTGTA 59.311 43.478 0.00 0.00 0.00 2.74
3759 5176 2.289002 CAGTTCTGCACAGAAGGTTGAC 59.711 50.000 13.21 1.91 46.93 3.18
3772 5189 1.623811 TGTTCTCTACCCCAGTTCTGC 59.376 52.381 0.00 0.00 0.00 4.26
3780 5200 0.543749 ATGCAGCTGTTCTCTACCCC 59.456 55.000 16.64 0.00 0.00 4.95
3816 5238 6.664384 AGTGTACACCAAAAGTCCCTTAAAAA 59.336 34.615 22.28 0.00 0.00 1.94
3876 5298 0.036306 CCACGCAAAACTACCTCCCT 59.964 55.000 0.00 0.00 0.00 4.20
3890 5312 2.617274 GGAGCCTGAACAACCACGC 61.617 63.158 0.00 0.00 0.00 5.34
3892 5314 0.179018 ACTGGAGCCTGAACAACCAC 60.179 55.000 0.08 0.00 0.00 4.16
3893 5315 0.550914 AACTGGAGCCTGAACAACCA 59.449 50.000 0.08 0.00 0.00 3.67
3899 5321 3.321682 CCAAAAATCAACTGGAGCCTGAA 59.678 43.478 0.08 0.00 31.38 3.02
3958 5380 2.203800 TAGCACGGTCGCTCATTTAG 57.796 50.000 8.07 0.00 42.62 1.85
3963 5385 2.264813 GTTAAATAGCACGGTCGCTCA 58.735 47.619 8.07 0.00 42.62 4.26
3964 5386 1.254570 CGTTAAATAGCACGGTCGCTC 59.745 52.381 8.07 0.00 42.62 5.03
3966 5388 0.994263 ACGTTAAATAGCACGGTCGC 59.006 50.000 0.00 0.00 40.84 5.19
3967 5389 1.266696 GCACGTTAAATAGCACGGTCG 60.267 52.381 0.00 0.00 40.84 4.79
3968 5390 1.727880 TGCACGTTAAATAGCACGGTC 59.272 47.619 0.00 0.00 40.84 4.79
3969 5391 1.461897 GTGCACGTTAAATAGCACGGT 59.538 47.619 10.18 0.00 46.35 4.83
3970 5392 2.153680 GTGCACGTTAAATAGCACGG 57.846 50.000 10.18 0.00 46.35 4.94
3973 5395 2.486203 CCCTTGTGCACGTTAAATAGCA 59.514 45.455 13.13 0.00 34.10 3.49
3974 5396 2.731027 GCCCTTGTGCACGTTAAATAGC 60.731 50.000 13.13 3.19 0.00 2.97
3975 5397 2.747446 AGCCCTTGTGCACGTTAAATAG 59.253 45.455 13.13 0.78 0.00 1.73
3993 5419 1.012841 CTCTCGATTTGCTTCCAGCC 58.987 55.000 0.00 0.00 41.51 4.85
4006 5433 1.070758 GCATATTTCCCTGCCTCTCGA 59.929 52.381 0.00 0.00 32.15 4.04
4017 5444 4.683334 GCCGCCGCGCATATTTCC 62.683 66.667 8.75 0.00 0.00 3.13
4033 5460 1.423845 CTTTACGCCACACATCGGC 59.576 57.895 0.00 0.00 46.62 5.54
4037 5464 1.875963 GCTGCTTTACGCCACACAT 59.124 52.632 0.00 0.00 38.05 3.21
4038 5465 2.603247 CGCTGCTTTACGCCACACA 61.603 57.895 0.00 0.00 38.05 3.72
4039 5466 1.837538 TTCGCTGCTTTACGCCACAC 61.838 55.000 0.00 0.00 38.05 3.82
4040 5467 1.595655 TTCGCTGCTTTACGCCACA 60.596 52.632 0.00 0.00 38.05 4.17
4041 5468 1.154469 GTTCGCTGCTTTACGCCAC 60.154 57.895 0.00 0.00 38.05 5.01
4042 5469 1.289109 GAGTTCGCTGCTTTACGCCA 61.289 55.000 0.00 0.00 38.05 5.69
4043 5470 1.420312 GAGTTCGCTGCTTTACGCC 59.580 57.895 0.00 0.00 38.05 5.68
4044 5471 1.057361 CGAGTTCGCTGCTTTACGC 59.943 57.895 0.00 0.00 39.77 4.42
4045 5472 1.578023 CTACGAGTTCGCTGCTTTACG 59.422 52.381 0.73 0.11 44.43 3.18
4046 5473 1.320852 GCTACGAGTTCGCTGCTTTAC 59.679 52.381 0.73 0.00 44.43 2.01
4047 5474 1.068125 TGCTACGAGTTCGCTGCTTTA 60.068 47.619 16.16 0.00 44.43 1.85
4048 5475 0.319555 TGCTACGAGTTCGCTGCTTT 60.320 50.000 16.16 0.00 44.43 3.51
4049 5476 0.319555 TTGCTACGAGTTCGCTGCTT 60.320 50.000 16.16 0.00 44.43 3.91
4050 5477 0.319555 TTTGCTACGAGTTCGCTGCT 60.320 50.000 16.16 0.00 44.43 4.24
4051 5478 0.721718 ATTTGCTACGAGTTCGCTGC 59.278 50.000 0.73 6.89 44.43 5.25
4052 5479 1.992667 TGATTTGCTACGAGTTCGCTG 59.007 47.619 0.73 0.00 44.43 5.18
4053 5480 2.363788 TGATTTGCTACGAGTTCGCT 57.636 45.000 0.73 0.00 44.43 4.93
4054 5481 4.772046 TTATGATTTGCTACGAGTTCGC 57.228 40.909 0.73 0.00 44.43 4.70
4055 5482 8.540492 AGTTAATTATGATTTGCTACGAGTTCG 58.460 33.333 0.00 0.00 46.33 3.95
4056 5483 9.638300 CAGTTAATTATGATTTGCTACGAGTTC 57.362 33.333 0.00 0.00 0.00 3.01
4057 5484 8.122952 GCAGTTAATTATGATTTGCTACGAGTT 58.877 33.333 0.00 0.00 0.00 3.01
4058 5485 7.254795 GGCAGTTAATTATGATTTGCTACGAGT 60.255 37.037 5.62 0.00 30.73 4.18
4059 5486 7.041780 AGGCAGTTAATTATGATTTGCTACGAG 60.042 37.037 5.62 0.00 30.73 4.18
4060 5487 6.765989 AGGCAGTTAATTATGATTTGCTACGA 59.234 34.615 5.62 0.00 30.73 3.43
4061 5488 6.959361 AGGCAGTTAATTATGATTTGCTACG 58.041 36.000 5.62 0.00 30.73 3.51
4064 5491 7.922811 GCTTAAGGCAGTTAATTATGATTTGCT 59.077 33.333 4.29 0.00 41.35 3.91
4065 5492 7.096477 CGCTTAAGGCAGTTAATTATGATTTGC 60.096 37.037 4.29 0.00 41.91 3.68
4066 5493 8.128582 TCGCTTAAGGCAGTTAATTATGATTTG 58.871 33.333 4.29 0.00 41.91 2.32
4067 5494 8.220755 TCGCTTAAGGCAGTTAATTATGATTT 57.779 30.769 4.29 0.00 41.91 2.17
4068 5495 7.801716 TCGCTTAAGGCAGTTAATTATGATT 57.198 32.000 4.29 0.00 41.91 2.57
4069 5496 7.801716 TTCGCTTAAGGCAGTTAATTATGAT 57.198 32.000 4.29 0.00 41.91 2.45
4070 5497 7.246674 CTTCGCTTAAGGCAGTTAATTATGA 57.753 36.000 4.29 0.00 41.91 2.15
4084 5511 0.108804 TGCTCGGTCCTTCGCTTAAG 60.109 55.000 0.00 0.00 34.73 1.85
4085 5512 0.108804 CTGCTCGGTCCTTCGCTTAA 60.109 55.000 0.00 0.00 0.00 1.85
4086 5513 1.511305 CTGCTCGGTCCTTCGCTTA 59.489 57.895 0.00 0.00 0.00 3.09
4087 5514 2.262915 CTGCTCGGTCCTTCGCTT 59.737 61.111 0.00 0.00 0.00 4.68
4088 5515 4.443266 GCTGCTCGGTCCTTCGCT 62.443 66.667 0.00 0.00 0.00 4.93
4090 5517 4.821589 GGGCTGCTCGGTCCTTCG 62.822 72.222 0.00 0.00 0.00 3.79
4091 5518 3.378399 GAGGGCTGCTCGGTCCTTC 62.378 68.421 3.03 0.00 41.96 3.46
4092 5519 3.394836 GAGGGCTGCTCGGTCCTT 61.395 66.667 3.03 0.00 41.96 3.36
4107 5534 0.248949 GCTAAAGGACGCTACCGGAG 60.249 60.000 9.46 1.84 39.22 4.63
4108 5535 0.966875 TGCTAAAGGACGCTACCGGA 60.967 55.000 9.46 0.00 39.22 5.14
4109 5536 0.108520 TTGCTAAAGGACGCTACCGG 60.109 55.000 0.00 0.00 39.22 5.28
4110 5537 1.717194 TTTGCTAAAGGACGCTACCG 58.283 50.000 0.00 0.00 41.14 4.02
4111 5538 3.267483 TGATTTGCTAAAGGACGCTACC 58.733 45.455 0.00 0.00 0.00 3.18
4112 5539 3.242446 GCTGATTTGCTAAAGGACGCTAC 60.242 47.826 0.00 0.00 0.00 3.58
4113 5540 2.936498 GCTGATTTGCTAAAGGACGCTA 59.064 45.455 0.00 0.00 0.00 4.26
4114 5541 1.740025 GCTGATTTGCTAAAGGACGCT 59.260 47.619 0.00 0.00 0.00 5.07
4115 5542 1.468520 TGCTGATTTGCTAAAGGACGC 59.531 47.619 0.00 0.00 0.00 5.19
4116 5543 2.159517 GGTGCTGATTTGCTAAAGGACG 60.160 50.000 0.00 0.00 32.34 4.79
4117 5544 2.159517 CGGTGCTGATTTGCTAAAGGAC 60.160 50.000 0.00 0.00 0.00 3.85
4118 5545 2.083774 CGGTGCTGATTTGCTAAAGGA 58.916 47.619 0.00 0.00 0.00 3.36
4119 5546 1.812571 ACGGTGCTGATTTGCTAAAGG 59.187 47.619 0.00 0.00 0.00 3.11
4120 5547 3.559238 AACGGTGCTGATTTGCTAAAG 57.441 42.857 0.00 0.00 0.00 1.85
4121 5548 5.239744 TCTTAAACGGTGCTGATTTGCTAAA 59.760 36.000 0.00 0.00 0.00 1.85
4122 5549 4.757657 TCTTAAACGGTGCTGATTTGCTAA 59.242 37.500 0.00 0.00 0.00 3.09
4123 5550 4.320023 TCTTAAACGGTGCTGATTTGCTA 58.680 39.130 0.00 0.00 0.00 3.49
4124 5551 3.146066 TCTTAAACGGTGCTGATTTGCT 58.854 40.909 0.00 0.00 0.00 3.91
4125 5552 3.552604 TCTTAAACGGTGCTGATTTGC 57.447 42.857 0.00 0.00 0.00 3.68
4126 5553 4.155826 TCCATCTTAAACGGTGCTGATTTG 59.844 41.667 0.00 0.00 0.00 2.32
4127 5554 4.156008 GTCCATCTTAAACGGTGCTGATTT 59.844 41.667 0.00 0.00 0.00 2.17
4128 5555 3.689649 GTCCATCTTAAACGGTGCTGATT 59.310 43.478 0.00 0.00 0.00 2.57
4129 5556 3.270877 GTCCATCTTAAACGGTGCTGAT 58.729 45.455 0.00 0.00 0.00 2.90
4130 5557 2.695359 GTCCATCTTAAACGGTGCTGA 58.305 47.619 0.00 0.00 0.00 4.26
4131 5558 1.393539 CGTCCATCTTAAACGGTGCTG 59.606 52.381 0.00 0.00 32.96 4.41
4132 5559 1.001633 ACGTCCATCTTAAACGGTGCT 59.998 47.619 2.10 0.00 40.58 4.40
4133 5560 1.127951 CACGTCCATCTTAAACGGTGC 59.872 52.381 2.10 0.00 40.58 5.01
4134 5561 2.679450 TCACGTCCATCTTAAACGGTG 58.321 47.619 2.10 0.00 40.58 4.94
4135 5562 3.518590 GATCACGTCCATCTTAAACGGT 58.481 45.455 2.10 0.00 40.58 4.83
4136 5563 2.534349 CGATCACGTCCATCTTAAACGG 59.466 50.000 2.10 0.00 40.58 4.44
4137 5564 3.431856 TCGATCACGTCCATCTTAAACG 58.568 45.455 0.00 0.00 41.93 3.60
4138 5565 4.669318 TCTCGATCACGTCCATCTTAAAC 58.331 43.478 0.00 0.00 40.69 2.01
4139 5566 4.976224 TCTCGATCACGTCCATCTTAAA 57.024 40.909 0.00 0.00 40.69 1.52
4140 5567 5.515797 AATCTCGATCACGTCCATCTTAA 57.484 39.130 0.00 0.00 40.69 1.85
4141 5568 5.515797 AAATCTCGATCACGTCCATCTTA 57.484 39.130 0.00 0.00 40.69 2.10
4142 5569 4.363999 GAAATCTCGATCACGTCCATCTT 58.636 43.478 0.00 0.00 40.69 2.40
4143 5570 3.971150 GAAATCTCGATCACGTCCATCT 58.029 45.455 0.00 0.00 40.69 2.90
4157 5584 1.683790 CGGTGCACGGACGAAATCTC 61.684 60.000 18.87 0.00 39.42 2.75
4158 5585 1.736645 CGGTGCACGGACGAAATCT 60.737 57.895 18.87 0.00 39.42 2.40
4159 5586 2.776072 CGGTGCACGGACGAAATC 59.224 61.111 18.87 0.00 39.42 2.17
4173 5600 4.522689 TGCTGTGCACACGACGGT 62.523 61.111 17.42 0.00 31.71 4.83
4174 5601 3.705638 CTGCTGTGCACACGACGG 61.706 66.667 17.42 9.74 33.79 4.79
4175 5602 2.035617 AAACTGCTGTGCACACGACG 62.036 55.000 17.42 7.51 33.79 5.12
4176 5603 0.316196 GAAACTGCTGTGCACACGAC 60.316 55.000 17.42 9.14 33.79 4.34
4177 5604 1.761244 CGAAACTGCTGTGCACACGA 61.761 55.000 17.42 3.99 33.79 4.35
4178 5605 1.368019 CGAAACTGCTGTGCACACG 60.368 57.895 17.42 12.47 33.79 4.49
4179 5606 0.041839 CTCGAAACTGCTGTGCACAC 60.042 55.000 17.42 13.56 33.79 3.82
4180 5607 1.159713 CCTCGAAACTGCTGTGCACA 61.160 55.000 20.37 20.37 33.79 4.57
4181 5608 1.571460 CCTCGAAACTGCTGTGCAC 59.429 57.895 10.75 10.75 33.79 4.57
4182 5609 2.253758 GCCTCGAAACTGCTGTGCA 61.254 57.895 0.00 0.00 36.92 4.57
4183 5610 1.785041 TTGCCTCGAAACTGCTGTGC 61.785 55.000 0.00 0.00 0.00 4.57
4184 5611 0.662619 TTTGCCTCGAAACTGCTGTG 59.337 50.000 0.00 0.00 0.00 3.66
4185 5612 1.065551 GTTTTGCCTCGAAACTGCTGT 59.934 47.619 0.00 0.00 35.52 4.40
4186 5613 1.334869 AGTTTTGCCTCGAAACTGCTG 59.665 47.619 10.46 0.00 43.80 4.41
4187 5614 1.680338 AGTTTTGCCTCGAAACTGCT 58.320 45.000 10.46 0.00 43.80 4.24
4188 5615 3.619233 TTAGTTTTGCCTCGAAACTGC 57.381 42.857 17.82 0.11 44.71 4.40
4189 5616 8.073768 TCTAAAATTAGTTTTGCCTCGAAACTG 58.926 33.333 17.82 4.42 44.71 3.16
4190 5617 8.161699 TCTAAAATTAGTTTTGCCTCGAAACT 57.838 30.769 14.44 14.44 46.17 2.66
4191 5618 8.287503 TCTCTAAAATTAGTTTTGCCTCGAAAC 58.712 33.333 6.23 2.31 38.01 2.78
4192 5619 8.385898 TCTCTAAAATTAGTTTTGCCTCGAAA 57.614 30.769 6.23 0.00 38.01 3.46
4193 5620 7.876068 TCTCTCTAAAATTAGTTTTGCCTCGAA 59.124 33.333 6.23 0.00 38.01 3.71
4194 5621 7.383687 TCTCTCTAAAATTAGTTTTGCCTCGA 58.616 34.615 6.23 0.00 38.01 4.04
4195 5622 7.596749 TCTCTCTAAAATTAGTTTTGCCTCG 57.403 36.000 6.23 0.00 38.01 4.63
4204 5631 8.961634 GGGATGCTTTTTCTCTCTAAAATTAGT 58.038 33.333 0.46 0.00 32.61 2.24
4205 5632 8.960591 TGGGATGCTTTTTCTCTCTAAAATTAG 58.039 33.333 0.00 0.00 0.00 1.73
4206 5633 8.877864 TGGGATGCTTTTTCTCTCTAAAATTA 57.122 30.769 0.00 0.00 0.00 1.40
4207 5634 7.781324 TGGGATGCTTTTTCTCTCTAAAATT 57.219 32.000 0.00 0.00 0.00 1.82
4208 5635 7.781324 TTGGGATGCTTTTTCTCTCTAAAAT 57.219 32.000 0.00 0.00 0.00 1.82
4209 5636 7.069331 TGTTTGGGATGCTTTTTCTCTCTAAAA 59.931 33.333 0.00 0.00 0.00 1.52
4210 5637 6.549364 TGTTTGGGATGCTTTTTCTCTCTAAA 59.451 34.615 0.00 0.00 0.00 1.85
4211 5638 6.068010 TGTTTGGGATGCTTTTTCTCTCTAA 58.932 36.000 0.00 0.00 0.00 2.10
4212 5639 5.630121 TGTTTGGGATGCTTTTTCTCTCTA 58.370 37.500 0.00 0.00 0.00 2.43
4213 5640 4.473444 TGTTTGGGATGCTTTTTCTCTCT 58.527 39.130 0.00 0.00 0.00 3.10
4214 5641 4.853924 TGTTTGGGATGCTTTTTCTCTC 57.146 40.909 0.00 0.00 0.00 3.20
4215 5642 4.590222 ACATGTTTGGGATGCTTTTTCTCT 59.410 37.500 0.00 0.00 0.00 3.10
4216 5643 4.886579 ACATGTTTGGGATGCTTTTTCTC 58.113 39.130 0.00 0.00 0.00 2.87
4217 5644 4.961438 ACATGTTTGGGATGCTTTTTCT 57.039 36.364 0.00 0.00 0.00 2.52
4218 5645 5.750650 CAAACATGTTTGGGATGCTTTTTC 58.249 37.500 34.07 0.00 44.47 2.29
4219 5646 5.754543 CAAACATGTTTGGGATGCTTTTT 57.245 34.783 34.07 4.26 44.47 1.94
4231 5658 7.066307 AGCCCTATTTTTCTCAAACATGTTT 57.934 32.000 18.13 18.13 0.00 2.83
4232 5659 6.670695 AGCCCTATTTTTCTCAAACATGTT 57.329 33.333 4.92 4.92 0.00 2.71
4233 5660 6.458210 CAAGCCCTATTTTTCTCAAACATGT 58.542 36.000 0.00 0.00 0.00 3.21
4234 5661 5.349543 GCAAGCCCTATTTTTCTCAAACATG 59.650 40.000 0.00 0.00 0.00 3.21
4235 5662 5.011943 TGCAAGCCCTATTTTTCTCAAACAT 59.988 36.000 0.00 0.00 0.00 2.71
4236 5663 4.343526 TGCAAGCCCTATTTTTCTCAAACA 59.656 37.500 0.00 0.00 0.00 2.83
4237 5664 4.686091 GTGCAAGCCCTATTTTTCTCAAAC 59.314 41.667 0.00 0.00 0.00 2.93
4238 5665 4.262420 GGTGCAAGCCCTATTTTTCTCAAA 60.262 41.667 0.00 0.00 0.00 2.69
4239 5666 3.258123 GGTGCAAGCCCTATTTTTCTCAA 59.742 43.478 0.00 0.00 0.00 3.02
4240 5667 2.825532 GGTGCAAGCCCTATTTTTCTCA 59.174 45.455 0.00 0.00 0.00 3.27
4241 5668 2.159379 CGGTGCAAGCCCTATTTTTCTC 60.159 50.000 0.00 0.00 0.00 2.87
4242 5669 1.818674 CGGTGCAAGCCCTATTTTTCT 59.181 47.619 0.00 0.00 0.00 2.52
4243 5670 1.135112 CCGGTGCAAGCCCTATTTTTC 60.135 52.381 0.00 0.00 0.00 2.29
4244 5671 0.894835 CCGGTGCAAGCCCTATTTTT 59.105 50.000 0.00 0.00 0.00 1.94
4245 5672 0.251608 ACCGGTGCAAGCCCTATTTT 60.252 50.000 6.12 0.00 0.00 1.82
4246 5673 0.965363 CACCGGTGCAAGCCCTATTT 60.965 55.000 24.02 0.00 0.00 1.40
4247 5674 1.378514 CACCGGTGCAAGCCCTATT 60.379 57.895 24.02 0.00 0.00 1.73
4248 5675 1.268992 TACACCGGTGCAAGCCCTAT 61.269 55.000 34.26 13.99 0.00 2.57
4249 5676 1.481901 TTACACCGGTGCAAGCCCTA 61.482 55.000 34.26 14.43 0.00 3.53
4250 5677 2.137177 ATTACACCGGTGCAAGCCCT 62.137 55.000 34.26 15.54 0.00 5.19
4251 5678 1.654023 GATTACACCGGTGCAAGCCC 61.654 60.000 34.26 16.47 0.00 5.19
4252 5679 0.676782 AGATTACACCGGTGCAAGCC 60.677 55.000 34.26 21.64 0.00 4.35
4253 5680 2.018542 TAGATTACACCGGTGCAAGC 57.981 50.000 34.26 29.35 0.00 4.01
4254 5681 5.106317 ACAAAATAGATTACACCGGTGCAAG 60.106 40.000 34.26 15.07 0.00 4.01
4255 5682 4.762765 ACAAAATAGATTACACCGGTGCAA 59.237 37.500 34.26 28.15 0.00 4.08
4256 5683 4.328536 ACAAAATAGATTACACCGGTGCA 58.671 39.130 34.26 20.45 0.00 4.57
4257 5684 4.393680 TGACAAAATAGATTACACCGGTGC 59.606 41.667 34.26 17.88 0.00 5.01
4258 5685 6.148811 AGTTGACAAAATAGATTACACCGGTG 59.851 38.462 32.83 32.83 0.00 4.94
4259 5686 6.235664 AGTTGACAAAATAGATTACACCGGT 58.764 36.000 0.00 0.00 0.00 5.28
4260 5687 6.737254 AGTTGACAAAATAGATTACACCGG 57.263 37.500 0.00 0.00 0.00 5.28
4261 5688 7.903431 GCTAAGTTGACAAAATAGATTACACCG 59.097 37.037 11.00 0.00 0.00 4.94
4262 5689 8.182227 GGCTAAGTTGACAAAATAGATTACACC 58.818 37.037 11.00 1.18 0.00 4.16
4263 5690 7.903431 CGGCTAAGTTGACAAAATAGATTACAC 59.097 37.037 11.00 0.00 0.00 2.90
4264 5691 7.604927 ACGGCTAAGTTGACAAAATAGATTACA 59.395 33.333 11.00 0.00 0.00 2.41
4265 5692 7.971455 ACGGCTAAGTTGACAAAATAGATTAC 58.029 34.615 11.00 0.00 0.00 1.89
4266 5693 9.656040 TTACGGCTAAGTTGACAAAATAGATTA 57.344 29.630 11.00 0.00 0.00 1.75
4267 5694 8.556213 TTACGGCTAAGTTGACAAAATAGATT 57.444 30.769 11.00 0.40 0.00 2.40
4268 5695 8.732746 ATTACGGCTAAGTTGACAAAATAGAT 57.267 30.769 11.00 1.58 0.00 1.98
4269 5696 8.556213 AATTACGGCTAAGTTGACAAAATAGA 57.444 30.769 11.00 0.00 0.00 1.98
4274 5701 8.339714 GCATATAATTACGGCTAAGTTGACAAA 58.660 33.333 0.00 0.00 0.00 2.83
4275 5702 7.496263 TGCATATAATTACGGCTAAGTTGACAA 59.504 33.333 6.45 0.00 0.00 3.18
4276 5703 6.987404 TGCATATAATTACGGCTAAGTTGACA 59.013 34.615 6.45 0.00 0.00 3.58
4277 5704 7.416154 TGCATATAATTACGGCTAAGTTGAC 57.584 36.000 6.45 0.00 0.00 3.18
4278 5705 7.713507 ACTTGCATATAATTACGGCTAAGTTGA 59.286 33.333 0.00 0.00 0.00 3.18
4279 5706 7.861630 ACTTGCATATAATTACGGCTAAGTTG 58.138 34.615 0.00 0.00 0.00 3.16
4280 5707 9.720769 ATACTTGCATATAATTACGGCTAAGTT 57.279 29.630 17.31 0.00 32.41 2.66
4285 5712 9.151471 CTTGTATACTTGCATATAATTACGGCT 57.849 33.333 4.17 0.00 0.00 5.52
4286 5713 8.932791 ACTTGTATACTTGCATATAATTACGGC 58.067 33.333 4.17 0.00 0.00 5.68
4295 5722 9.760077 GTAGTGGTAACTTGTATACTTGCATAT 57.240 33.333 4.17 0.00 37.88 1.78
4296 5723 8.974238 AGTAGTGGTAACTTGTATACTTGCATA 58.026 33.333 4.17 0.00 37.88 3.14
4297 5724 7.764443 CAGTAGTGGTAACTTGTATACTTGCAT 59.236 37.037 4.17 0.00 37.88 3.96
4298 5725 7.039574 TCAGTAGTGGTAACTTGTATACTTGCA 60.040 37.037 4.17 0.00 37.88 4.08
4299 5726 7.318141 TCAGTAGTGGTAACTTGTATACTTGC 58.682 38.462 4.17 0.00 37.88 4.01
4300 5727 9.701098 TTTCAGTAGTGGTAACTTGTATACTTG 57.299 33.333 4.17 0.00 37.88 3.16
4325 5752 3.469739 ACTCGGTAACCACACGATTTTT 58.530 40.909 0.00 0.00 35.93 1.94
4326 5753 3.116079 ACTCGGTAACCACACGATTTT 57.884 42.857 0.00 0.00 35.93 1.82
4327 5754 2.825861 ACTCGGTAACCACACGATTT 57.174 45.000 0.00 0.00 35.93 2.17
4328 5755 2.825861 AACTCGGTAACCACACGATT 57.174 45.000 0.00 0.00 35.93 3.34
4329 5756 2.825861 AAACTCGGTAACCACACGAT 57.174 45.000 0.00 0.00 35.93 3.73
4330 5757 2.600470 AAAACTCGGTAACCACACGA 57.400 45.000 0.00 0.00 35.14 4.35
4353 5780 2.972267 CCACGCATGGGCAAACAT 59.028 55.556 10.10 0.00 43.04 2.71
4362 5789 1.886313 CCAGAGCTAGCCACGCATG 60.886 63.158 12.13 1.42 0.00 4.06
4363 5790 2.503061 CCAGAGCTAGCCACGCAT 59.497 61.111 12.13 0.00 0.00 4.73
4397 5824 2.364448 GAAGGAGCGGGAGGAGGT 60.364 66.667 0.00 0.00 0.00 3.85
4406 5833 4.148825 CACGGAGGGGAAGGAGCG 62.149 72.222 0.00 0.00 0.00 5.03
4407 5834 4.475135 GCACGGAGGGGAAGGAGC 62.475 72.222 0.00 0.00 0.00 4.70
4408 5835 3.787001 GGCACGGAGGGGAAGGAG 61.787 72.222 0.00 0.00 0.00 3.69
4439 5866 1.589716 GCAAATGCCTCTGACGCCTT 61.590 55.000 0.00 0.00 34.31 4.35
4447 5874 2.393768 CGCAGACGCAAATGCCTCT 61.394 57.895 0.00 0.44 39.30 3.69
4453 5880 1.965930 TGCTTCCGCAGACGCAAAT 60.966 52.632 0.00 0.00 43.61 2.32
4469 5896 3.145551 CAGCCAGGAGCCCAATGC 61.146 66.667 0.00 0.00 45.47 3.56
4470 5897 1.751927 GTCAGCCAGGAGCCCAATG 60.752 63.158 0.00 0.00 45.47 2.82
4471 5898 2.679716 GTCAGCCAGGAGCCCAAT 59.320 61.111 0.00 0.00 45.47 3.16
4472 5899 3.650950 GGTCAGCCAGGAGCCCAA 61.651 66.667 0.00 0.00 45.47 4.12
4511 5938 2.345991 CCCGACCATGTGTTCGGT 59.654 61.111 20.25 0.00 43.50 4.69
4555 5982 0.813610 CACTGTCCTTGTTCGTGGCA 60.814 55.000 0.00 0.00 0.00 4.92
4561 5988 1.605712 CCCGTCTCACTGTCCTTGTTC 60.606 57.143 0.00 0.00 0.00 3.18
4566 5993 2.283966 CCCCCGTCTCACTGTCCT 60.284 66.667 0.00 0.00 0.00 3.85
4570 5997 4.742201 CACGCCCCCGTCTCACTG 62.742 72.222 0.00 0.00 46.39 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.