Multiple sequence alignment - TraesCS7A01G094400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G094400 chr7A 100.000 3263 0 0 1 3263 57801476 57804738 0.000000e+00 6026
1 TraesCS7A01G094400 chr7A 93.057 1253 73 6 1382 2622 57864260 57865510 0.000000e+00 1820
2 TraesCS7A01G094400 chr7A 85.329 927 56 30 377 1245 57863232 57864136 0.000000e+00 885
3 TraesCS7A01G094400 chr7A 97.177 248 6 1 1 247 665759710 665759957 5.040000e-113 418
4 TraesCS7A01G094400 chr7D 86.826 2634 193 49 268 2818 54318411 54320973 0.000000e+00 2800
5 TraesCS7A01G094400 chr7D 86.497 2007 157 31 856 2822 54353115 54355047 0.000000e+00 2100
6 TraesCS7A01G094400 chr7D 86.815 1934 149 35 440 2307 54335503 54337396 0.000000e+00 2061
7 TraesCS7A01G094400 chr7D 91.166 1132 64 10 1428 2527 54310821 54311948 0.000000e+00 1504
8 TraesCS7A01G094400 chr7D 84.833 389 35 14 849 1225 54310435 54310811 1.430000e-98 370
9 TraesCS7A01G094400 chr7D 86.425 221 13 10 404 608 54309759 54309978 3.280000e-55 226
10 TraesCS7A01G094400 chr7D 80.645 248 18 19 604 836 54310151 54310383 7.240000e-37 165
11 TraesCS7A01G094400 chrUn 92.168 881 62 3 1428 2307 49139893 49140767 0.000000e+00 1238
12 TraesCS7A01G094400 chrUn 91.714 881 66 3 1428 2307 49113054 49113928 0.000000e+00 1216
13 TraesCS7A01G094400 chrUn 91.629 884 67 3 1428 2310 384624768 384623891 0.000000e+00 1216
14 TraesCS7A01G094400 chrUn 87.719 912 50 26 365 1225 49112126 49113026 0.000000e+00 1007
15 TraesCS7A01G094400 chrUn 87.836 781 44 22 485 1225 49139096 49139865 0.000000e+00 869
16 TraesCS7A01G094400 chrUn 92.290 441 21 6 789 1225 384625227 384624796 5.980000e-172 614
17 TraesCS7A01G094400 chrUn 84.144 637 43 23 365 954 329825441 329826066 6.110000e-157 564
18 TraesCS7A01G094400 chrUn 84.144 637 43 23 365 954 329829698 329829073 6.110000e-157 564
19 TraesCS7A01G094400 chr4A 92.164 855 64 1 1428 2282 669898188 669899039 0.000000e+00 1205
20 TraesCS7A01G094400 chr4A 87.836 781 44 22 485 1225 669891511 669892280 0.000000e+00 869
21 TraesCS7A01G094400 chr4A 85.399 589 70 7 2345 2929 669899081 669899657 6.030000e-167 597
22 TraesCS7A01G094400 chr4A 90.419 334 30 2 2930 3263 673183472 673183141 3.870000e-119 438
23 TraesCS7A01G094400 chr6A 94.801 327 15 2 2930 3255 100673038 100672713 2.900000e-140 508
24 TraesCS7A01G094400 chr6A 85.714 175 24 1 1246 1419 598186852 598186678 2.000000e-42 183
25 TraesCS7A01G094400 chr6A 86.585 164 21 1 1248 1410 316927885 316928048 2.590000e-41 180
26 TraesCS7A01G094400 chr3A 93.558 326 20 1 2930 3255 647791326 647791650 4.890000e-133 484
27 TraesCS7A01G094400 chr6D 92.073 328 25 1 2930 3257 281869827 281870153 8.250000e-126 460
28 TraesCS7A01G094400 chr1A 92.049 327 24 1 2930 3256 17872151 17871827 2.970000e-125 459
29 TraesCS7A01G094400 chr5B 91.768 328 25 2 2930 3256 583611078 583610752 3.840000e-124 455
30 TraesCS7A01G094400 chr5B 91.768 328 23 4 2930 3255 660154729 660154404 1.380000e-123 453
31 TraesCS7A01G094400 chr5B 90.476 252 18 5 1 248 13614787 13615036 8.730000e-86 327
32 TraesCS7A01G094400 chr5B 90.119 253 18 6 1 247 530931817 530931566 4.060000e-84 322
33 TraesCS7A01G094400 chr5B 90.040 251 18 6 1 247 13647523 13647770 5.250000e-83 318
34 TraesCS7A01G094400 chr5B 89.723 253 19 6 1 248 546904046 546903796 1.890000e-82 316
35 TraesCS7A01G094400 chr5B 86.047 172 23 1 1249 1419 497782031 497781860 2.000000e-42 183
36 TraesCS7A01G094400 chr7B 91.265 332 26 3 2930 3259 580154731 580155061 1.790000e-122 449
37 TraesCS7A01G094400 chr7B 89.412 255 19 7 1 249 594051462 594051714 6.800000e-82 315
38 TraesCS7A01G094400 chr1D 90.909 330 28 2 2930 3259 420656393 420656720 2.990000e-120 442
39 TraesCS7A01G094400 chr1B 89.600 250 20 5 1 246 645097428 645097181 2.440000e-81 313
40 TraesCS7A01G094400 chr1B 90.129 233 19 3 19 248 583851382 583851151 1.900000e-77 300
41 TraesCS7A01G094400 chr3B 89.286 252 19 6 1 246 139472823 139473072 3.160000e-80 309
42 TraesCS7A01G094400 chr4B 86.127 173 23 1 1248 1419 544132971 544132799 5.560000e-43 185
43 TraesCS7A01G094400 chr2A 87.195 164 20 1 1248 1410 249493041 249493204 5.560000e-43 185
44 TraesCS7A01G094400 chr2A 87.195 164 20 1 1248 1410 336818998 336819161 5.560000e-43 185
45 TraesCS7A01G094400 chr2A 85.965 171 22 2 1248 1417 252896021 252896190 7.190000e-42 182


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G094400 chr7A 57801476 57804738 3262 False 6026.00 6026 100.00000 1 3263 1 chr7A.!!$F1 3262
1 TraesCS7A01G094400 chr7A 57863232 57865510 2278 False 1352.50 1820 89.19300 377 2622 2 chr7A.!!$F3 2245
2 TraesCS7A01G094400 chr7D 54318411 54320973 2562 False 2800.00 2800 86.82600 268 2818 1 chr7D.!!$F1 2550
3 TraesCS7A01G094400 chr7D 54353115 54355047 1932 False 2100.00 2100 86.49700 856 2822 1 chr7D.!!$F3 1966
4 TraesCS7A01G094400 chr7D 54335503 54337396 1893 False 2061.00 2061 86.81500 440 2307 1 chr7D.!!$F2 1867
5 TraesCS7A01G094400 chr7D 54309759 54311948 2189 False 566.25 1504 85.76725 404 2527 4 chr7D.!!$F4 2123
6 TraesCS7A01G094400 chrUn 49112126 49113928 1802 False 1111.50 1216 89.71650 365 2307 2 chrUn.!!$F2 1942
7 TraesCS7A01G094400 chrUn 49139096 49140767 1671 False 1053.50 1238 90.00200 485 2307 2 chrUn.!!$F3 1822
8 TraesCS7A01G094400 chrUn 384623891 384625227 1336 True 915.00 1216 91.95950 789 2310 2 chrUn.!!$R2 1521
9 TraesCS7A01G094400 chrUn 329825441 329826066 625 False 564.00 564 84.14400 365 954 1 chrUn.!!$F1 589
10 TraesCS7A01G094400 chrUn 329829073 329829698 625 True 564.00 564 84.14400 365 954 1 chrUn.!!$R1 589
11 TraesCS7A01G094400 chr4A 669898188 669899657 1469 False 901.00 1205 88.78150 1428 2929 2 chr4A.!!$F2 1501
12 TraesCS7A01G094400 chr4A 669891511 669892280 769 False 869.00 869 87.83600 485 1225 1 chr4A.!!$F1 740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
228 229 0.239347 AATCAGCTGACGTGCAAAGC 59.761 50.0 20.97 0.0 37.2 3.51 F
527 545 0.309302 CGGGAAAACATGCGTCAACA 59.691 50.0 0.00 0.0 0.0 3.33 F
716 953 0.318784 GTATCATCACCGACGCCCTC 60.319 60.0 0.00 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2134 2522 0.819582 GGGATGTTGGCATTGTCCAG 59.180 55.000 12.64 0.0 37.44 3.86 R
2157 2545 1.679898 GAACCTGTCCTCCCACCAG 59.320 63.158 0.00 0.0 0.00 4.00 R
2658 3092 1.153568 GCATGTAGCTGCCGAGTCA 60.154 57.895 0.00 0.0 41.15 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.829373 AAAAGGGCAAAGATTCTATCTAATGT 57.171 30.769 0.00 0.00 39.08 2.71
28 29 8.829373 AAAGGGCAAAGATTCTATCTAATGTT 57.171 30.769 0.00 0.00 39.08 2.71
29 30 8.829373 AAGGGCAAAGATTCTATCTAATGTTT 57.171 30.769 0.00 0.00 39.08 2.83
30 31 8.457238 AGGGCAAAGATTCTATCTAATGTTTC 57.543 34.615 0.00 0.00 39.08 2.78
31 32 8.055181 AGGGCAAAGATTCTATCTAATGTTTCA 58.945 33.333 0.00 0.00 39.08 2.69
32 33 8.854117 GGGCAAAGATTCTATCTAATGTTTCAT 58.146 33.333 0.00 0.00 39.08 2.57
63 64 9.927668 AGAAAATCATTGTACTATGTTTTTGGG 57.072 29.630 28.12 3.34 37.46 4.12
64 65 9.150348 GAAAATCATTGTACTATGTTTTTGGGG 57.850 33.333 28.12 2.78 37.46 4.96
65 66 6.790232 ATCATTGTACTATGTTTTTGGGGG 57.210 37.500 15.44 0.00 0.00 5.40
66 67 5.893500 TCATTGTACTATGTTTTTGGGGGA 58.106 37.500 15.44 0.00 0.00 4.81
67 68 6.315714 TCATTGTACTATGTTTTTGGGGGAA 58.684 36.000 15.44 0.00 0.00 3.97
68 69 6.957020 TCATTGTACTATGTTTTTGGGGGAAT 59.043 34.615 15.44 0.00 0.00 3.01
69 70 8.116669 TCATTGTACTATGTTTTTGGGGGAATA 58.883 33.333 15.44 0.00 0.00 1.75
70 71 7.948034 TTGTACTATGTTTTTGGGGGAATAG 57.052 36.000 0.00 0.00 0.00 1.73
71 72 7.034967 TGTACTATGTTTTTGGGGGAATAGT 57.965 36.000 0.00 0.00 35.57 2.12
72 73 7.471890 TGTACTATGTTTTTGGGGGAATAGTT 58.528 34.615 0.00 0.00 33.90 2.24
73 74 6.850752 ACTATGTTTTTGGGGGAATAGTTG 57.149 37.500 0.00 0.00 28.85 3.16
74 75 6.319715 ACTATGTTTTTGGGGGAATAGTTGT 58.680 36.000 0.00 0.00 28.85 3.32
75 76 6.785466 ACTATGTTTTTGGGGGAATAGTTGTT 59.215 34.615 0.00 0.00 28.85 2.83
76 77 7.951245 ACTATGTTTTTGGGGGAATAGTTGTTA 59.049 33.333 0.00 0.00 28.85 2.41
77 78 7.806680 ATGTTTTTGGGGGAATAGTTGTTAT 57.193 32.000 0.00 0.00 0.00 1.89
78 79 6.998802 TGTTTTTGGGGGAATAGTTGTTATG 58.001 36.000 0.00 0.00 0.00 1.90
79 80 5.669164 TTTTGGGGGAATAGTTGTTATGC 57.331 39.130 0.00 0.00 0.00 3.14
80 81 2.925724 TGGGGGAATAGTTGTTATGCG 58.074 47.619 0.00 0.00 0.00 4.73
81 82 2.227194 GGGGGAATAGTTGTTATGCGG 58.773 52.381 0.00 0.00 0.00 5.69
82 83 1.607148 GGGGAATAGTTGTTATGCGGC 59.393 52.381 0.00 0.00 0.00 6.53
83 84 1.607148 GGGAATAGTTGTTATGCGGCC 59.393 52.381 0.00 0.00 0.00 6.13
84 85 2.572290 GGAATAGTTGTTATGCGGCCT 58.428 47.619 0.00 0.00 0.00 5.19
85 86 2.949644 GGAATAGTTGTTATGCGGCCTT 59.050 45.455 0.00 0.00 0.00 4.35
86 87 3.243068 GGAATAGTTGTTATGCGGCCTTG 60.243 47.826 0.00 0.00 0.00 3.61
87 88 1.091537 TAGTTGTTATGCGGCCTTGC 58.908 50.000 0.00 0.00 0.00 4.01
95 96 3.061848 GCGGCCTTGCAAAGCCTA 61.062 61.111 31.10 0.00 44.44 3.93
96 97 2.635443 GCGGCCTTGCAAAGCCTAA 61.635 57.895 31.10 0.00 44.44 2.69
97 98 1.963679 CGGCCTTGCAAAGCCTAAA 59.036 52.632 31.10 0.00 44.44 1.85
98 99 0.316841 CGGCCTTGCAAAGCCTAAAA 59.683 50.000 31.10 0.00 44.44 1.52
99 100 1.270041 CGGCCTTGCAAAGCCTAAAAA 60.270 47.619 31.10 0.00 44.44 1.94
100 101 2.612721 CGGCCTTGCAAAGCCTAAAAAT 60.613 45.455 31.10 0.00 44.44 1.82
101 102 2.743664 GGCCTTGCAAAGCCTAAAAATG 59.256 45.455 28.33 0.00 44.44 2.32
102 103 3.556843 GGCCTTGCAAAGCCTAAAAATGA 60.557 43.478 28.33 0.00 44.44 2.57
103 104 4.256110 GCCTTGCAAAGCCTAAAAATGAT 58.744 39.130 8.95 0.00 44.44 2.45
104 105 4.696877 GCCTTGCAAAGCCTAAAAATGATT 59.303 37.500 8.95 0.00 44.44 2.57
105 106 5.163824 GCCTTGCAAAGCCTAAAAATGATTC 60.164 40.000 8.95 0.00 44.44 2.52
106 107 5.352293 CCTTGCAAAGCCTAAAAATGATTCC 59.648 40.000 0.00 0.00 44.44 3.01
107 108 5.480642 TGCAAAGCCTAAAAATGATTCCA 57.519 34.783 0.00 0.00 0.00 3.53
108 109 5.862845 TGCAAAGCCTAAAAATGATTCCAA 58.137 33.333 0.00 0.00 0.00 3.53
109 110 6.294473 TGCAAAGCCTAAAAATGATTCCAAA 58.706 32.000 0.00 0.00 0.00 3.28
110 111 6.769822 TGCAAAGCCTAAAAATGATTCCAAAA 59.230 30.769 0.00 0.00 0.00 2.44
111 112 7.447853 TGCAAAGCCTAAAAATGATTCCAAAAT 59.552 29.630 0.00 0.00 0.00 1.82
112 113 7.751793 GCAAAGCCTAAAAATGATTCCAAAATG 59.248 33.333 0.00 0.00 0.00 2.32
113 114 6.990341 AGCCTAAAAATGATTCCAAAATGC 57.010 33.333 0.00 0.00 0.00 3.56
114 115 6.714278 AGCCTAAAAATGATTCCAAAATGCT 58.286 32.000 0.00 0.00 0.00 3.79
115 116 7.170277 AGCCTAAAAATGATTCCAAAATGCTT 58.830 30.769 0.00 0.00 0.00 3.91
116 117 8.320617 AGCCTAAAAATGATTCCAAAATGCTTA 58.679 29.630 0.00 0.00 0.00 3.09
117 118 9.112725 GCCTAAAAATGATTCCAAAATGCTTAT 57.887 29.630 0.00 0.00 0.00 1.73
140 141 4.978099 TGGATATCTCCATTTGAAGCCTC 58.022 43.478 2.05 0.00 46.95 4.70
141 142 4.413189 TGGATATCTCCATTTGAAGCCTCA 59.587 41.667 2.05 0.00 46.95 3.86
142 143 5.103982 TGGATATCTCCATTTGAAGCCTCAA 60.104 40.000 2.05 0.00 46.95 3.02
143 144 6.008960 GGATATCTCCATTTGAAGCCTCAAT 58.991 40.000 0.00 0.00 40.13 2.57
144 145 6.072064 GGATATCTCCATTTGAAGCCTCAATG 60.072 42.308 0.00 0.38 40.13 2.82
145 146 4.305539 TCTCCATTTGAAGCCTCAATGA 57.694 40.909 0.00 0.00 41.22 2.57
146 147 4.665451 TCTCCATTTGAAGCCTCAATGAA 58.335 39.130 0.00 0.00 41.22 2.57
147 148 5.078949 TCTCCATTTGAAGCCTCAATGAAA 58.921 37.500 0.00 0.00 41.22 2.69
148 149 5.539574 TCTCCATTTGAAGCCTCAATGAAAA 59.460 36.000 0.00 0.00 41.22 2.29
149 150 6.041865 TCTCCATTTGAAGCCTCAATGAAAAA 59.958 34.615 0.00 0.00 41.22 1.94
217 218 9.597170 AGTATGATGCTTATATGTAATCAGCTG 57.403 33.333 7.63 7.63 0.00 4.24
218 219 9.591792 GTATGATGCTTATATGTAATCAGCTGA 57.408 33.333 20.79 20.79 0.00 4.26
219 220 7.895975 TGATGCTTATATGTAATCAGCTGAC 57.104 36.000 20.97 7.93 0.00 3.51
220 221 6.587608 TGATGCTTATATGTAATCAGCTGACG 59.412 38.462 20.97 0.00 0.00 4.35
221 222 5.842907 TGCTTATATGTAATCAGCTGACGT 58.157 37.500 20.97 12.85 0.00 4.34
222 223 5.691754 TGCTTATATGTAATCAGCTGACGTG 59.308 40.000 20.97 0.00 0.00 4.49
223 224 5.388890 GCTTATATGTAATCAGCTGACGTGC 60.389 44.000 20.97 14.08 0.00 5.34
224 225 2.385013 ATGTAATCAGCTGACGTGCA 57.615 45.000 20.97 19.31 34.99 4.57
225 226 2.162319 TGTAATCAGCTGACGTGCAA 57.838 45.000 20.97 0.00 34.99 4.08
226 227 2.488952 TGTAATCAGCTGACGTGCAAA 58.511 42.857 20.97 0.00 34.99 3.68
227 228 2.480037 TGTAATCAGCTGACGTGCAAAG 59.520 45.455 20.97 0.00 34.99 2.77
228 229 0.239347 AATCAGCTGACGTGCAAAGC 59.761 50.000 20.97 0.00 37.20 3.51
229 230 0.886043 ATCAGCTGACGTGCAAAGCA 60.886 50.000 20.97 0.00 39.47 3.91
242 243 4.822036 TGCAAAGCACGTACAAATTACT 57.178 36.364 0.00 0.00 31.71 2.24
243 244 5.926214 TGCAAAGCACGTACAAATTACTA 57.074 34.783 0.00 0.00 31.71 1.82
244 245 5.922546 TGCAAAGCACGTACAAATTACTAG 58.077 37.500 0.00 0.00 31.71 2.57
245 246 5.467399 TGCAAAGCACGTACAAATTACTAGT 59.533 36.000 0.00 0.00 31.71 2.57
246 247 6.645827 TGCAAAGCACGTACAAATTACTAGTA 59.354 34.615 0.00 0.00 31.71 1.82
247 248 7.332430 TGCAAAGCACGTACAAATTACTAGTAT 59.668 33.333 2.79 0.00 31.71 2.12
248 249 8.173130 GCAAAGCACGTACAAATTACTAGTATT 58.827 33.333 2.79 0.00 0.00 1.89
249 250 9.472995 CAAAGCACGTACAAATTACTAGTATTG 57.527 33.333 12.64 12.64 0.00 1.90
250 251 7.230466 AGCACGTACAAATTACTAGTATTGC 57.770 36.000 13.72 7.56 33.39 3.56
251 252 6.814644 AGCACGTACAAATTACTAGTATTGCA 59.185 34.615 13.72 1.70 34.58 4.08
252 253 6.898189 GCACGTACAAATTACTAGTATTGCAC 59.102 38.462 13.72 11.06 33.41 4.57
253 254 7.201496 GCACGTACAAATTACTAGTATTGCACT 60.201 37.037 13.72 1.38 41.62 4.40
254 255 9.292846 CACGTACAAATTACTAGTATTGCACTA 57.707 33.333 13.72 0.63 38.80 2.74
255 256 9.859427 ACGTACAAATTACTAGTATTGCACTAA 57.141 29.630 13.72 0.00 39.28 2.24
259 260 9.226606 ACAAATTACTAGTATTGCACTAAAGCA 57.773 29.630 13.72 0.00 43.99 3.91
315 316 8.219105 GCTGATCTTGATTTTCATGTTTTCAAC 58.781 33.333 0.00 0.00 0.00 3.18
316 317 9.251792 CTGATCTTGATTTTCATGTTTTCAACA 57.748 29.630 0.00 0.00 46.94 3.33
317 318 9.251792 TGATCTTGATTTTCATGTTTTCAACAG 57.748 29.630 0.00 0.00 45.95 3.16
360 361 4.188247 TGATTTCCAAGAGAGTACACCG 57.812 45.455 0.00 0.00 0.00 4.94
361 362 3.576982 TGATTTCCAAGAGAGTACACCGT 59.423 43.478 0.00 0.00 0.00 4.83
482 494 5.106317 ACACACAGACAGAAATGAAACGTTT 60.106 36.000 14.57 14.57 0.00 3.60
515 533 0.887387 CTTCTCAACGGCCGGGAAAA 60.887 55.000 31.76 18.07 0.00 2.29
524 542 2.622011 GCCGGGAAAACATGCGTCA 61.622 57.895 2.18 0.00 0.00 4.35
525 543 1.953017 CCGGGAAAACATGCGTCAA 59.047 52.632 0.00 0.00 0.00 3.18
527 545 0.309302 CGGGAAAACATGCGTCAACA 59.691 50.000 0.00 0.00 0.00 3.33
535 553 2.435422 ACATGCGTCAACATCAATCCA 58.565 42.857 0.00 0.00 0.00 3.41
557 575 7.178573 TCCACTGCTTGATCTAGCTACTATAT 58.821 38.462 25.85 5.05 41.76 0.86
558 576 7.671819 TCCACTGCTTGATCTAGCTACTATATT 59.328 37.037 25.85 0.72 41.76 1.28
559 577 8.961634 CCACTGCTTGATCTAGCTACTATATTA 58.038 37.037 25.85 5.49 41.76 0.98
560 578 9.781834 CACTGCTTGATCTAGCTACTATATTAC 57.218 37.037 25.85 0.00 41.76 1.89
561 579 9.747898 ACTGCTTGATCTAGCTACTATATTACT 57.252 33.333 25.85 0.00 41.76 2.24
607 804 3.436704 CCGGTTCATGCATATGTACATCC 59.563 47.826 12.68 3.00 36.60 3.51
615 832 4.244862 TGCATATGTACATCCGCATGTAG 58.755 43.478 21.88 0.00 44.61 2.74
716 953 0.318784 GTATCATCACCGACGCCCTC 60.319 60.000 0.00 0.00 0.00 4.30
734 986 3.286751 CGGTGCCACTGGGTTGTG 61.287 66.667 0.00 0.00 37.66 3.33
765 1017 1.000394 TGAGCCAATTGAACGACGAGA 60.000 47.619 7.12 0.00 0.00 4.04
882 1184 1.066858 TGCTCGCCTATATAAGCAGCC 60.067 52.381 17.59 2.90 39.69 4.85
1059 1387 1.844771 CGTGTGCTTTGCTGCTGCTA 61.845 55.000 17.00 6.36 40.48 3.49
1236 1564 4.758688 TCGTCGAGGTATGTACTACTCAA 58.241 43.478 4.85 0.00 0.00 3.02
1238 1566 6.515832 TCGTCGAGGTATGTACTACTCAATA 58.484 40.000 4.85 0.00 0.00 1.90
1245 1573 9.733219 GAGGTATGTACTACTCAATACAAGAAC 57.267 37.037 0.00 0.00 35.05 3.01
1246 1574 9.476928 AGGTATGTACTACTCAATACAAGAACT 57.523 33.333 0.00 0.00 35.05 3.01
1270 1614 6.978343 TGTTCAAGAATTCGTCCGATTAAT 57.022 33.333 0.00 0.00 0.00 1.40
1275 1619 7.485810 TCAAGAATTCGTCCGATTAATCAGTA 58.514 34.615 15.57 0.00 0.00 2.74
1277 1621 8.765219 CAAGAATTCGTCCGATTAATCAGTAAT 58.235 33.333 15.57 4.89 34.97 1.89
1281 1625 6.281848 TCGTCCGATTAATCAGTAATTTGC 57.718 37.500 15.57 0.00 32.26 3.68
1311 1685 1.679944 CCTACTCGTAGGGTCACCGAA 60.680 57.143 14.08 0.00 46.96 4.30
1323 1697 4.163458 AGGGTCACCGAATAGCTGATAAAA 59.837 41.667 0.00 0.00 43.47 1.52
1325 1699 5.531287 GGGTCACCGAATAGCTGATAAAATT 59.469 40.000 0.00 0.00 0.00 1.82
1386 1764 2.158505 TGCCGACTAGCCTACTAATCCT 60.159 50.000 0.00 0.00 0.00 3.24
1387 1765 2.229302 GCCGACTAGCCTACTAATCCTG 59.771 54.545 0.00 0.00 0.00 3.86
1404 1782 2.046604 GTACTCACCGGCCAACCC 60.047 66.667 0.00 0.00 0.00 4.11
1413 1791 2.276740 GGCCAACCCAGCAGCTAT 59.723 61.111 0.00 0.00 0.00 2.97
1416 1794 0.680921 GCCAACCCAGCAGCTATCAA 60.681 55.000 0.00 0.00 0.00 2.57
1421 1799 2.659428 ACCCAGCAGCTATCAATTTCC 58.341 47.619 0.00 0.00 0.00 3.13
1422 1800 2.243221 ACCCAGCAGCTATCAATTTCCT 59.757 45.455 0.00 0.00 0.00 3.36
1423 1801 2.883386 CCCAGCAGCTATCAATTTCCTC 59.117 50.000 0.00 0.00 0.00 3.71
1424 1802 2.883386 CCAGCAGCTATCAATTTCCTCC 59.117 50.000 0.00 0.00 0.00 4.30
1765 2153 0.605589 CTTCTCCAACGCCTCTGAGT 59.394 55.000 3.66 0.00 0.00 3.41
1806 2194 1.300620 CACGTCCAACCTCAGCGAA 60.301 57.895 0.00 0.00 0.00 4.70
2134 2522 4.148825 AGACGGCGAGGATGGTGC 62.149 66.667 16.62 0.00 0.00 5.01
2331 2723 2.106166 AGGATCACTCCATCTCCATTGC 59.894 50.000 0.00 0.00 44.79 3.56
2335 2727 2.306805 TCACTCCATCTCCATTGCTTGT 59.693 45.455 0.00 0.00 0.00 3.16
2352 2760 3.751698 GCTTGTTTTCATCCGAGTTACCT 59.248 43.478 0.00 0.00 0.00 3.08
2365 2795 4.151867 CCGAGTTACCTCTGTAAAGTTTGC 59.848 45.833 0.00 0.00 38.62 3.68
2383 2816 3.763097 TGCTTGTTTTAGCATCCATCG 57.237 42.857 0.00 0.00 45.72 3.84
2396 2829 4.037923 AGCATCCATCGTTGTTGTCTTTTT 59.962 37.500 0.00 0.00 0.00 1.94
2465 2898 4.319139 ACATGTGTAAATGTGCTGCAAA 57.681 36.364 2.77 0.00 39.32 3.68
2471 2904 4.511082 GTGTAAATGTGCTGCAAACCAATT 59.489 37.500 2.77 0.40 0.00 2.32
2478 2911 4.094590 TGTGCTGCAAACCAATTTTCTTTG 59.905 37.500 2.77 0.00 0.00 2.77
2586 3019 1.281656 GGAAAGTTGGTCGTTGGCG 59.718 57.895 0.00 0.00 39.92 5.69
2588 3021 0.379316 GAAAGTTGGTCGTTGGCGTT 59.621 50.000 0.00 0.00 39.49 4.84
2610 3043 2.542020 TGCCGAGAGTCAAATCACAA 57.458 45.000 0.00 0.00 0.00 3.33
2625 3058 6.253298 TCAAATCACAAAAGCTCGACAAAAAG 59.747 34.615 0.00 0.00 0.00 2.27
2689 3123 2.930887 GCTACATGCCGTTGTTGAGAGA 60.931 50.000 0.00 0.00 35.15 3.10
2739 3173 6.830873 ATAAACTCGGCTTATACGGACTAT 57.169 37.500 0.00 0.00 0.00 2.12
2771 3205 2.283966 ACTGGCAGGCCGTACTCT 60.284 61.111 20.34 0.00 39.42 3.24
2772 3206 1.000019 ACTGGCAGGCCGTACTCTA 60.000 57.895 20.34 0.00 39.42 2.43
2780 3214 3.251571 CAGGCCGTACTCTACAAAGTTC 58.748 50.000 0.00 0.00 0.00 3.01
2825 3259 1.897133 TGTTGTGTAGTCCGCTATGGT 59.103 47.619 0.00 0.00 39.52 3.55
2838 3272 3.119101 CCGCTATGGTAGACTGAGTTTGT 60.119 47.826 0.00 0.00 0.00 2.83
2839 3273 4.495422 CGCTATGGTAGACTGAGTTTGTT 58.505 43.478 0.00 0.00 0.00 2.83
2851 3285 0.250901 AGTTTGTTGAGCTCCCGCAT 60.251 50.000 12.15 0.00 39.10 4.73
2869 3303 4.271687 CGCATTACGGAACTTGAAATAGC 58.728 43.478 0.00 0.00 38.44 2.97
2876 3310 4.514066 ACGGAACTTGAAATAGCTTTCGTT 59.486 37.500 0.00 0.00 43.10 3.85
2880 3314 8.056571 CGGAACTTGAAATAGCTTTCGTTATAG 58.943 37.037 0.00 0.00 43.10 1.31
2929 3363 2.254350 GTTTTGCCGAGTTCCCGC 59.746 61.111 0.00 0.00 0.00 6.13
2930 3364 3.350612 TTTTGCCGAGTTCCCGCG 61.351 61.111 0.00 0.00 0.00 6.46
2931 3365 3.811118 TTTTGCCGAGTTCCCGCGA 62.811 57.895 8.23 0.00 35.78 5.87
2932 3366 4.735132 TTGCCGAGTTCCCGCGAG 62.735 66.667 8.23 0.00 35.78 5.03
2952 3386 4.872664 GAGGATTCTCGTAGGTGGTAATG 58.127 47.826 0.00 0.00 0.00 1.90
2953 3387 3.641906 AGGATTCTCGTAGGTGGTAATGG 59.358 47.826 0.00 0.00 0.00 3.16
2954 3388 3.640029 GGATTCTCGTAGGTGGTAATGGA 59.360 47.826 0.00 0.00 0.00 3.41
2955 3389 4.262079 GGATTCTCGTAGGTGGTAATGGAG 60.262 50.000 0.00 0.00 0.00 3.86
2956 3390 3.657398 TCTCGTAGGTGGTAATGGAGA 57.343 47.619 0.00 0.00 0.00 3.71
2957 3391 3.285484 TCTCGTAGGTGGTAATGGAGAC 58.715 50.000 0.00 0.00 0.00 3.36
2958 3392 3.053842 TCTCGTAGGTGGTAATGGAGACT 60.054 47.826 0.00 0.00 0.00 3.24
2959 3393 3.021695 TCGTAGGTGGTAATGGAGACTG 58.978 50.000 0.00 0.00 0.00 3.51
2960 3394 3.021695 CGTAGGTGGTAATGGAGACTGA 58.978 50.000 0.00 0.00 0.00 3.41
2961 3395 3.637229 CGTAGGTGGTAATGGAGACTGAT 59.363 47.826 0.00 0.00 0.00 2.90
2962 3396 4.099573 CGTAGGTGGTAATGGAGACTGATT 59.900 45.833 0.00 0.00 0.00 2.57
2963 3397 4.494091 AGGTGGTAATGGAGACTGATTG 57.506 45.455 0.00 0.00 0.00 2.67
2964 3398 2.945668 GGTGGTAATGGAGACTGATTGC 59.054 50.000 0.00 0.00 0.00 3.56
2965 3399 3.370953 GGTGGTAATGGAGACTGATTGCT 60.371 47.826 0.00 0.00 0.00 3.91
2966 3400 4.265073 GTGGTAATGGAGACTGATTGCTT 58.735 43.478 0.00 0.00 0.00 3.91
2967 3401 4.095483 GTGGTAATGGAGACTGATTGCTTG 59.905 45.833 0.00 0.00 0.00 4.01
2968 3402 3.629398 GGTAATGGAGACTGATTGCTTGG 59.371 47.826 0.00 0.00 0.00 3.61
2969 3403 3.726557 AATGGAGACTGATTGCTTGGA 57.273 42.857 0.00 0.00 0.00 3.53
2970 3404 2.775911 TGGAGACTGATTGCTTGGAG 57.224 50.000 0.00 0.00 0.00 3.86
2971 3405 2.259917 TGGAGACTGATTGCTTGGAGA 58.740 47.619 0.00 0.00 0.00 3.71
2972 3406 2.842496 TGGAGACTGATTGCTTGGAGAT 59.158 45.455 0.00 0.00 0.00 2.75
2973 3407 3.204526 GGAGACTGATTGCTTGGAGATG 58.795 50.000 0.00 0.00 0.00 2.90
2974 3408 3.204526 GAGACTGATTGCTTGGAGATGG 58.795 50.000 0.00 0.00 0.00 3.51
2975 3409 2.575279 AGACTGATTGCTTGGAGATGGT 59.425 45.455 0.00 0.00 0.00 3.55
2976 3410 2.681848 GACTGATTGCTTGGAGATGGTG 59.318 50.000 0.00 0.00 0.00 4.17
2977 3411 2.306805 ACTGATTGCTTGGAGATGGTGA 59.693 45.455 0.00 0.00 0.00 4.02
2978 3412 2.681848 CTGATTGCTTGGAGATGGTGAC 59.318 50.000 0.00 0.00 0.00 3.67
2979 3413 2.306805 TGATTGCTTGGAGATGGTGACT 59.693 45.455 0.00 0.00 0.00 3.41
2980 3414 2.479566 TTGCTTGGAGATGGTGACTC 57.520 50.000 0.00 0.00 0.00 3.36
2981 3415 1.649321 TGCTTGGAGATGGTGACTCT 58.351 50.000 0.00 0.00 35.10 3.24
2982 3416 1.552337 TGCTTGGAGATGGTGACTCTC 59.448 52.381 0.00 0.00 38.74 3.20
2983 3417 1.830477 GCTTGGAGATGGTGACTCTCT 59.170 52.381 2.48 0.00 39.30 3.10
2984 3418 2.418471 GCTTGGAGATGGTGACTCTCTG 60.418 54.545 2.48 0.00 39.30 3.35
2985 3419 1.857965 TGGAGATGGTGACTCTCTGG 58.142 55.000 2.48 0.00 39.30 3.86
2986 3420 1.359130 TGGAGATGGTGACTCTCTGGA 59.641 52.381 2.48 0.00 39.30 3.86
2987 3421 2.225369 TGGAGATGGTGACTCTCTGGAA 60.225 50.000 2.48 0.00 39.30 3.53
2988 3422 2.167487 GGAGATGGTGACTCTCTGGAAC 59.833 54.545 2.48 0.00 39.30 3.62
2989 3423 2.828520 GAGATGGTGACTCTCTGGAACA 59.171 50.000 0.00 0.00 36.91 3.18
2990 3424 2.564947 AGATGGTGACTCTCTGGAACAC 59.435 50.000 0.00 0.00 0.00 3.32
2991 3425 2.088104 TGGTGACTCTCTGGAACACT 57.912 50.000 0.00 0.00 33.08 3.55
2992 3426 1.964223 TGGTGACTCTCTGGAACACTC 59.036 52.381 0.00 0.00 33.08 3.51
2993 3427 1.068194 GGTGACTCTCTGGAACACTCG 60.068 57.143 0.00 0.00 33.08 4.18
2994 3428 0.598562 TGACTCTCTGGAACACTCGC 59.401 55.000 0.00 0.00 0.00 5.03
2995 3429 0.109039 GACTCTCTGGAACACTCGCC 60.109 60.000 0.00 0.00 0.00 5.54
2996 3430 0.827925 ACTCTCTGGAACACTCGCCA 60.828 55.000 0.00 0.00 0.00 5.69
2997 3431 0.389166 CTCTCTGGAACACTCGCCAC 60.389 60.000 0.00 0.00 0.00 5.01
2998 3432 1.112916 TCTCTGGAACACTCGCCACA 61.113 55.000 0.00 0.00 0.00 4.17
2999 3433 0.249868 CTCTGGAACACTCGCCACAA 60.250 55.000 0.00 0.00 0.00 3.33
3000 3434 0.396435 TCTGGAACACTCGCCACAAT 59.604 50.000 0.00 0.00 0.00 2.71
3001 3435 1.202758 TCTGGAACACTCGCCACAATT 60.203 47.619 0.00 0.00 0.00 2.32
3002 3436 1.197721 CTGGAACACTCGCCACAATTC 59.802 52.381 0.00 0.00 0.00 2.17
3003 3437 1.202758 TGGAACACTCGCCACAATTCT 60.203 47.619 0.00 0.00 0.00 2.40
3004 3438 1.464997 GGAACACTCGCCACAATTCTC 59.535 52.381 0.00 0.00 0.00 2.87
3005 3439 1.126846 GAACACTCGCCACAATTCTCG 59.873 52.381 0.00 0.00 0.00 4.04
3006 3440 0.670546 ACACTCGCCACAATTCTCGG 60.671 55.000 0.00 0.00 0.00 4.63
3007 3441 0.670546 CACTCGCCACAATTCTCGGT 60.671 55.000 0.00 0.00 0.00 4.69
3008 3442 0.389948 ACTCGCCACAATTCTCGGTC 60.390 55.000 0.00 0.00 0.00 4.79
3009 3443 0.389817 CTCGCCACAATTCTCGGTCA 60.390 55.000 0.00 0.00 0.00 4.02
3010 3444 0.034198 TCGCCACAATTCTCGGTCAA 59.966 50.000 0.00 0.00 0.00 3.18
3011 3445 1.086696 CGCCACAATTCTCGGTCAAT 58.913 50.000 0.00 0.00 0.00 2.57
3012 3446 1.468520 CGCCACAATTCTCGGTCAATT 59.531 47.619 0.00 0.00 0.00 2.32
3013 3447 2.728846 CGCCACAATTCTCGGTCAATTG 60.729 50.000 0.00 0.00 43.89 2.32
3084 3518 9.846248 ACTCTTTTTGATATTCAGCATGTAAAC 57.154 29.630 0.00 0.00 37.40 2.01
3085 3519 9.844790 CTCTTTTTGATATTCAGCATGTAAACA 57.155 29.630 0.00 0.00 37.40 2.83
3086 3520 9.844790 TCTTTTTGATATTCAGCATGTAAACAG 57.155 29.630 0.00 0.00 37.40 3.16
3087 3521 8.984891 TTTTTGATATTCAGCATGTAAACAGG 57.015 30.769 0.00 0.00 37.40 4.00
3088 3522 7.701539 TTTGATATTCAGCATGTAAACAGGT 57.298 32.000 0.00 0.00 37.40 4.00
3089 3523 6.925610 TGATATTCAGCATGTAAACAGGTC 57.074 37.500 0.00 0.00 37.40 3.85
3090 3524 6.413892 TGATATTCAGCATGTAAACAGGTCA 58.586 36.000 0.00 0.00 37.40 4.02
3091 3525 6.539826 TGATATTCAGCATGTAAACAGGTCAG 59.460 38.462 0.00 0.00 37.40 3.51
3092 3526 2.426522 TCAGCATGTAAACAGGTCAGC 58.573 47.619 0.00 0.00 37.40 4.26
3093 3527 2.038952 TCAGCATGTAAACAGGTCAGCT 59.961 45.455 0.00 0.00 37.40 4.24
3094 3528 3.260632 TCAGCATGTAAACAGGTCAGCTA 59.739 43.478 0.00 0.00 37.40 3.32
3095 3529 4.002982 CAGCATGTAAACAGGTCAGCTAA 58.997 43.478 0.00 0.00 0.00 3.09
3096 3530 4.637534 CAGCATGTAAACAGGTCAGCTAAT 59.362 41.667 0.00 0.00 0.00 1.73
3097 3531 5.817296 CAGCATGTAAACAGGTCAGCTAATA 59.183 40.000 0.00 0.00 0.00 0.98
3098 3532 6.484643 CAGCATGTAAACAGGTCAGCTAATAT 59.515 38.462 0.00 0.00 0.00 1.28
3099 3533 6.708054 AGCATGTAAACAGGTCAGCTAATATC 59.292 38.462 0.00 0.00 0.00 1.63
3100 3534 6.073003 GCATGTAAACAGGTCAGCTAATATCC 60.073 42.308 0.00 0.00 0.00 2.59
3101 3535 5.925509 TGTAAACAGGTCAGCTAATATCCC 58.074 41.667 0.00 0.00 0.00 3.85
3102 3536 3.753294 AACAGGTCAGCTAATATCCCG 57.247 47.619 0.00 0.00 0.00 5.14
3103 3537 1.971357 ACAGGTCAGCTAATATCCCGG 59.029 52.381 0.00 0.00 0.00 5.73
3104 3538 0.977395 AGGTCAGCTAATATCCCGGC 59.023 55.000 0.00 0.00 0.00 6.13
3105 3539 0.389948 GGTCAGCTAATATCCCGGCG 60.390 60.000 0.00 0.00 0.00 6.46
3106 3540 1.014564 GTCAGCTAATATCCCGGCGC 61.015 60.000 0.00 0.00 0.00 6.53
3107 3541 1.005037 CAGCTAATATCCCGGCGCA 60.005 57.895 10.83 0.00 0.00 6.09
3108 3542 0.391661 CAGCTAATATCCCGGCGCAT 60.392 55.000 10.83 0.00 0.00 4.73
3109 3543 0.108138 AGCTAATATCCCGGCGCATC 60.108 55.000 10.83 0.00 0.00 3.91
3110 3544 0.108138 GCTAATATCCCGGCGCATCT 60.108 55.000 10.83 0.00 0.00 2.90
3111 3545 1.676014 GCTAATATCCCGGCGCATCTT 60.676 52.381 10.83 0.00 0.00 2.40
3112 3546 2.699954 CTAATATCCCGGCGCATCTTT 58.300 47.619 10.83 0.00 0.00 2.52
3113 3547 1.238439 AATATCCCGGCGCATCTTTG 58.762 50.000 10.83 0.00 0.00 2.77
3114 3548 0.108585 ATATCCCGGCGCATCTTTGT 59.891 50.000 10.83 0.00 0.00 2.83
3115 3549 0.813610 TATCCCGGCGCATCTTTGTG 60.814 55.000 10.83 0.00 36.41 3.33
3122 3556 3.182538 CGCATCTTTGTGCAAAGCA 57.817 47.368 17.16 8.78 45.48 3.91
3140 3574 2.624316 CACGCTTGCATTCTGAATGT 57.376 45.000 26.22 7.51 41.01 2.71
3141 3575 2.247637 CACGCTTGCATTCTGAATGTG 58.752 47.619 26.22 18.61 41.01 3.21
3142 3576 2.095617 CACGCTTGCATTCTGAATGTGA 60.096 45.455 26.22 16.27 41.01 3.58
3143 3577 2.095567 ACGCTTGCATTCTGAATGTGAC 60.096 45.455 26.22 13.77 41.01 3.67
3144 3578 2.730090 CGCTTGCATTCTGAATGTGACC 60.730 50.000 26.22 13.47 41.01 4.02
3145 3579 2.730090 GCTTGCATTCTGAATGTGACCG 60.730 50.000 26.22 14.22 41.01 4.79
3146 3580 2.470983 TGCATTCTGAATGTGACCGA 57.529 45.000 26.22 6.34 41.01 4.69
3147 3581 2.989909 TGCATTCTGAATGTGACCGAT 58.010 42.857 26.22 0.00 41.01 4.18
3148 3582 4.135747 TGCATTCTGAATGTGACCGATA 57.864 40.909 26.22 5.76 41.01 2.92
3149 3583 4.122046 TGCATTCTGAATGTGACCGATAG 58.878 43.478 26.22 3.11 41.01 2.08
3150 3584 3.059325 GCATTCTGAATGTGACCGATAGC 60.059 47.826 26.22 8.75 41.01 2.97
3151 3585 4.375272 CATTCTGAATGTGACCGATAGCT 58.625 43.478 19.74 0.00 34.18 3.32
3152 3586 3.443099 TCTGAATGTGACCGATAGCTG 57.557 47.619 0.00 0.00 0.00 4.24
3153 3587 2.101415 TCTGAATGTGACCGATAGCTGG 59.899 50.000 0.00 0.00 0.00 4.85
3154 3588 1.221414 GAATGTGACCGATAGCTGGC 58.779 55.000 0.00 0.00 0.00 4.85
3155 3589 0.833287 AATGTGACCGATAGCTGGCT 59.167 50.000 0.00 0.00 0.00 4.75
3156 3590 0.833287 ATGTGACCGATAGCTGGCTT 59.167 50.000 0.00 0.00 0.00 4.35
3157 3591 1.480789 TGTGACCGATAGCTGGCTTA 58.519 50.000 0.00 0.00 0.00 3.09
3158 3592 1.828595 TGTGACCGATAGCTGGCTTAA 59.171 47.619 0.00 0.00 0.00 1.85
3159 3593 2.159099 TGTGACCGATAGCTGGCTTAAG 60.159 50.000 0.00 0.00 0.00 1.85
3160 3594 1.412710 TGACCGATAGCTGGCTTAAGG 59.587 52.381 4.29 4.63 0.00 2.69
3161 3595 1.687123 GACCGATAGCTGGCTTAAGGA 59.313 52.381 4.29 0.00 0.00 3.36
3162 3596 1.689273 ACCGATAGCTGGCTTAAGGAG 59.311 52.381 4.29 0.00 0.00 3.69
3163 3597 1.964223 CCGATAGCTGGCTTAAGGAGA 59.036 52.381 4.29 0.00 0.00 3.71
3164 3598 2.288518 CCGATAGCTGGCTTAAGGAGAC 60.289 54.545 4.29 0.00 0.00 3.36
3166 3600 3.305064 CGATAGCTGGCTTAAGGAGACTC 60.305 52.174 4.29 0.00 42.68 3.36
3167 3601 1.199615 AGCTGGCTTAAGGAGACTCC 58.800 55.000 14.15 14.15 42.68 3.85
3168 3602 0.179097 GCTGGCTTAAGGAGACTCCG 60.179 60.000 15.97 2.83 42.75 4.63
3169 3603 0.461961 CTGGCTTAAGGAGACTCCGG 59.538 60.000 15.97 0.00 42.75 5.14
3170 3604 0.252103 TGGCTTAAGGAGACTCCGGT 60.252 55.000 15.97 10.55 42.75 5.28
3171 3605 0.903236 GGCTTAAGGAGACTCCGGTT 59.097 55.000 15.97 8.42 42.75 4.44
3172 3606 1.278413 GGCTTAAGGAGACTCCGGTTT 59.722 52.381 15.97 7.71 42.75 3.27
3173 3607 2.290134 GGCTTAAGGAGACTCCGGTTTT 60.290 50.000 15.97 7.35 42.75 2.43
3174 3608 3.409570 GCTTAAGGAGACTCCGGTTTTT 58.590 45.455 15.97 6.98 42.75 1.94
3193 3627 2.977772 TTTTGGTGACCAGCCTTTTG 57.022 45.000 3.77 0.00 33.81 2.44
3194 3628 1.118838 TTTGGTGACCAGCCTTTTGG 58.881 50.000 3.77 0.00 44.09 3.28
3206 3640 1.631405 CCTTTTGGCTGATTGTCCCA 58.369 50.000 0.00 0.00 0.00 4.37
3207 3641 1.969923 CCTTTTGGCTGATTGTCCCAA 59.030 47.619 0.00 0.00 36.88 4.12
3208 3642 2.028748 CCTTTTGGCTGATTGTCCCAAG 60.029 50.000 0.00 0.00 39.56 3.61
3209 3643 2.673775 TTTGGCTGATTGTCCCAAGA 57.326 45.000 0.00 0.00 39.56 3.02
3210 3644 2.673775 TTGGCTGATTGTCCCAAGAA 57.326 45.000 0.00 0.00 33.92 2.52
3211 3645 1.909700 TGGCTGATTGTCCCAAGAAC 58.090 50.000 0.00 0.00 0.00 3.01
3212 3646 1.144708 TGGCTGATTGTCCCAAGAACA 59.855 47.619 0.00 0.00 0.00 3.18
3213 3647 1.541588 GGCTGATTGTCCCAAGAACAC 59.458 52.381 0.00 0.00 0.00 3.32
3214 3648 1.541588 GCTGATTGTCCCAAGAACACC 59.458 52.381 0.00 0.00 0.00 4.16
3215 3649 2.815589 GCTGATTGTCCCAAGAACACCT 60.816 50.000 0.00 0.00 0.00 4.00
3216 3650 3.490348 CTGATTGTCCCAAGAACACCTT 58.510 45.455 0.00 0.00 34.91 3.50
3217 3651 3.486383 TGATTGTCCCAAGAACACCTTC 58.514 45.455 0.00 0.00 31.42 3.46
3218 3652 3.117701 TGATTGTCCCAAGAACACCTTCA 60.118 43.478 0.00 0.00 31.42 3.02
3219 3653 3.593442 TTGTCCCAAGAACACCTTCAT 57.407 42.857 0.00 0.00 31.42 2.57
3220 3654 4.715534 TTGTCCCAAGAACACCTTCATA 57.284 40.909 0.00 0.00 31.42 2.15
3221 3655 4.927267 TGTCCCAAGAACACCTTCATAT 57.073 40.909 0.00 0.00 31.42 1.78
3222 3656 4.588899 TGTCCCAAGAACACCTTCATATG 58.411 43.478 0.00 0.00 31.42 1.78
3223 3657 4.288366 TGTCCCAAGAACACCTTCATATGA 59.712 41.667 0.00 0.00 31.42 2.15
3224 3658 5.222027 TGTCCCAAGAACACCTTCATATGAA 60.222 40.000 17.07 17.07 31.42 2.57
3225 3659 5.888161 GTCCCAAGAACACCTTCATATGAAT 59.112 40.000 18.26 3.40 33.01 2.57
3226 3660 7.054124 GTCCCAAGAACACCTTCATATGAATA 58.946 38.462 18.26 0.00 33.01 1.75
3227 3661 7.556275 GTCCCAAGAACACCTTCATATGAATAA 59.444 37.037 18.26 0.00 33.01 1.40
3228 3662 8.112822 TCCCAAGAACACCTTCATATGAATAAA 58.887 33.333 18.26 0.00 33.01 1.40
3229 3663 8.408601 CCCAAGAACACCTTCATATGAATAAAG 58.591 37.037 18.26 6.87 33.01 1.85
3230 3664 7.917505 CCAAGAACACCTTCATATGAATAAAGC 59.082 37.037 18.26 7.28 33.01 3.51
3231 3665 8.680903 CAAGAACACCTTCATATGAATAAAGCT 58.319 33.333 18.26 9.20 33.01 3.74
3232 3666 8.814038 AGAACACCTTCATATGAATAAAGCTT 57.186 30.769 18.26 0.00 33.01 3.74
3233 3667 9.247861 AGAACACCTTCATATGAATAAAGCTTT 57.752 29.630 18.26 17.30 33.01 3.51
3234 3668 9.508567 GAACACCTTCATATGAATAAAGCTTTC 57.491 33.333 16.57 1.81 33.01 2.62
3235 3669 8.814038 ACACCTTCATATGAATAAAGCTTTCT 57.186 30.769 16.57 2.47 33.01 2.52
3236 3670 8.680903 ACACCTTCATATGAATAAAGCTTTCTG 58.319 33.333 16.57 2.74 33.01 3.02
3237 3671 8.133627 CACCTTCATATGAATAAAGCTTTCTGG 58.866 37.037 16.57 13.05 33.01 3.86
3238 3672 7.836183 ACCTTCATATGAATAAAGCTTTCTGGT 59.164 33.333 16.57 13.63 33.01 4.00
3239 3673 8.689972 CCTTCATATGAATAAAGCTTTCTGGTT 58.310 33.333 16.57 6.85 33.97 3.67
3242 3676 8.686334 TCATATGAATAAAGCTTTCTGGTTTCC 58.314 33.333 16.57 0.00 44.18 3.13
3243 3677 5.722021 TGAATAAAGCTTTCTGGTTTCCC 57.278 39.130 16.57 0.00 44.18 3.97
3244 3678 5.393866 TGAATAAAGCTTTCTGGTTTCCCT 58.606 37.500 16.57 0.00 44.18 4.20
3245 3679 5.243730 TGAATAAAGCTTTCTGGTTTCCCTG 59.756 40.000 16.57 0.00 44.18 4.45
3246 3680 1.332195 AAGCTTTCTGGTTTCCCTGC 58.668 50.000 0.00 0.00 31.57 4.85
3247 3681 0.185901 AGCTTTCTGGTTTCCCTGCA 59.814 50.000 0.00 0.00 0.00 4.41
3248 3682 1.039856 GCTTTCTGGTTTCCCTGCAA 58.960 50.000 0.00 0.00 0.00 4.08
3249 3683 1.412343 GCTTTCTGGTTTCCCTGCAAA 59.588 47.619 0.00 0.00 0.00 3.68
3250 3684 2.158971 GCTTTCTGGTTTCCCTGCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
3251 3685 3.681313 GCTTTCTGGTTTCCCTGCAAAAA 60.681 43.478 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.920946 ACATTAGATAGAATCTTTGCCCTTTTA 57.079 29.630 0.00 0.00 40.76 1.52
2 3 8.829373 ACATTAGATAGAATCTTTGCCCTTTT 57.171 30.769 0.00 0.00 40.76 2.27
3 4 8.829373 AACATTAGATAGAATCTTTGCCCTTT 57.171 30.769 0.00 0.00 40.76 3.11
4 5 8.829373 AAACATTAGATAGAATCTTTGCCCTT 57.171 30.769 0.00 0.00 40.76 3.95
5 6 8.055181 TGAAACATTAGATAGAATCTTTGCCCT 58.945 33.333 0.00 0.00 40.76 5.19
6 7 8.225603 TGAAACATTAGATAGAATCTTTGCCC 57.774 34.615 0.00 0.00 40.76 5.36
37 38 9.927668 CCCAAAAACATAGTACAATGATTTTCT 57.072 29.630 0.00 0.00 38.81 2.52
38 39 9.150348 CCCCAAAAACATAGTACAATGATTTTC 57.850 33.333 0.00 0.00 38.81 2.29
39 40 8.100164 CCCCCAAAAACATAGTACAATGATTTT 58.900 33.333 0.00 0.00 40.41 1.82
40 41 7.456269 TCCCCCAAAAACATAGTACAATGATTT 59.544 33.333 0.00 0.00 34.46 2.17
41 42 6.957020 TCCCCCAAAAACATAGTACAATGATT 59.043 34.615 0.00 0.00 0.00 2.57
42 43 6.498538 TCCCCCAAAAACATAGTACAATGAT 58.501 36.000 0.00 0.00 0.00 2.45
43 44 5.893500 TCCCCCAAAAACATAGTACAATGA 58.106 37.500 0.00 0.00 0.00 2.57
44 45 6.597832 TTCCCCCAAAAACATAGTACAATG 57.402 37.500 0.00 0.00 0.00 2.82
45 46 8.119891 ACTATTCCCCCAAAAACATAGTACAAT 58.880 33.333 0.00 0.00 0.00 2.71
46 47 7.471890 ACTATTCCCCCAAAAACATAGTACAA 58.528 34.615 0.00 0.00 0.00 2.41
47 48 7.034967 ACTATTCCCCCAAAAACATAGTACA 57.965 36.000 0.00 0.00 0.00 2.90
48 49 7.395206 ACAACTATTCCCCCAAAAACATAGTAC 59.605 37.037 0.00 0.00 29.29 2.73
49 50 7.471890 ACAACTATTCCCCCAAAAACATAGTA 58.528 34.615 0.00 0.00 29.29 1.82
50 51 6.319715 ACAACTATTCCCCCAAAAACATAGT 58.680 36.000 0.00 0.00 0.00 2.12
51 52 6.850752 ACAACTATTCCCCCAAAAACATAG 57.149 37.500 0.00 0.00 0.00 2.23
52 53 8.754080 CATAACAACTATTCCCCCAAAAACATA 58.246 33.333 0.00 0.00 0.00 2.29
53 54 7.619965 CATAACAACTATTCCCCCAAAAACAT 58.380 34.615 0.00 0.00 0.00 2.71
54 55 6.519213 GCATAACAACTATTCCCCCAAAAACA 60.519 38.462 0.00 0.00 0.00 2.83
55 56 5.872617 GCATAACAACTATTCCCCCAAAAAC 59.127 40.000 0.00 0.00 0.00 2.43
56 57 5.336849 CGCATAACAACTATTCCCCCAAAAA 60.337 40.000 0.00 0.00 0.00 1.94
57 58 4.158764 CGCATAACAACTATTCCCCCAAAA 59.841 41.667 0.00 0.00 0.00 2.44
58 59 3.697045 CGCATAACAACTATTCCCCCAAA 59.303 43.478 0.00 0.00 0.00 3.28
59 60 3.283751 CGCATAACAACTATTCCCCCAA 58.716 45.455 0.00 0.00 0.00 4.12
60 61 2.422235 CCGCATAACAACTATTCCCCCA 60.422 50.000 0.00 0.00 0.00 4.96
61 62 2.227194 CCGCATAACAACTATTCCCCC 58.773 52.381 0.00 0.00 0.00 5.40
62 63 1.607148 GCCGCATAACAACTATTCCCC 59.393 52.381 0.00 0.00 0.00 4.81
63 64 1.607148 GGCCGCATAACAACTATTCCC 59.393 52.381 0.00 0.00 0.00 3.97
64 65 2.572290 AGGCCGCATAACAACTATTCC 58.428 47.619 0.00 0.00 0.00 3.01
65 66 3.792124 GCAAGGCCGCATAACAACTATTC 60.792 47.826 0.00 0.00 0.00 1.75
66 67 2.099098 GCAAGGCCGCATAACAACTATT 59.901 45.455 0.00 0.00 0.00 1.73
67 68 1.676006 GCAAGGCCGCATAACAACTAT 59.324 47.619 0.00 0.00 0.00 2.12
68 69 1.091537 GCAAGGCCGCATAACAACTA 58.908 50.000 0.00 0.00 0.00 2.24
69 70 0.893270 TGCAAGGCCGCATAACAACT 60.893 50.000 0.59 0.00 36.86 3.16
70 71 0.038709 TTGCAAGGCCGCATAACAAC 60.039 50.000 6.12 0.00 42.62 3.32
71 72 0.676184 TTTGCAAGGCCGCATAACAA 59.324 45.000 6.12 0.00 42.62 2.83
72 73 0.243365 CTTTGCAAGGCCGCATAACA 59.757 50.000 6.12 0.00 42.62 2.41
73 74 1.078201 GCTTTGCAAGGCCGCATAAC 61.078 55.000 22.03 0.00 42.62 1.89
74 75 1.215117 GCTTTGCAAGGCCGCATAA 59.785 52.632 22.03 3.75 42.62 1.90
75 76 2.884367 GCTTTGCAAGGCCGCATA 59.116 55.556 22.03 1.05 42.62 3.14
82 83 5.352293 GGAATCATTTTTAGGCTTTGCAAGG 59.648 40.000 3.80 3.80 0.00 3.61
83 84 5.933463 TGGAATCATTTTTAGGCTTTGCAAG 59.067 36.000 0.00 0.00 0.00 4.01
84 85 5.862845 TGGAATCATTTTTAGGCTTTGCAA 58.137 33.333 0.00 0.00 0.00 4.08
85 86 5.480642 TGGAATCATTTTTAGGCTTTGCA 57.519 34.783 0.00 0.00 0.00 4.08
86 87 6.799926 TTTGGAATCATTTTTAGGCTTTGC 57.200 33.333 0.00 0.00 0.00 3.68
87 88 7.751793 GCATTTTGGAATCATTTTTAGGCTTTG 59.248 33.333 0.00 0.00 0.00 2.77
88 89 7.666804 AGCATTTTGGAATCATTTTTAGGCTTT 59.333 29.630 0.00 0.00 0.00 3.51
89 90 7.170277 AGCATTTTGGAATCATTTTTAGGCTT 58.830 30.769 0.00 0.00 0.00 4.35
90 91 6.714278 AGCATTTTGGAATCATTTTTAGGCT 58.286 32.000 0.00 0.00 0.00 4.58
91 92 6.990341 AGCATTTTGGAATCATTTTTAGGC 57.010 33.333 0.00 0.00 0.00 3.93
95 96 9.517868 TCCAATAAGCATTTTGGAATCATTTTT 57.482 25.926 10.83 0.00 46.36 1.94
105 106 7.528996 TGGAGATATCCAATAAGCATTTTGG 57.471 36.000 6.60 4.95 43.10 3.28
106 107 9.991906 AAATGGAGATATCCAATAAGCATTTTG 57.008 29.630 14.17 0.00 43.83 2.44
107 108 9.991906 CAAATGGAGATATCCAATAAGCATTTT 57.008 29.630 14.17 3.89 43.83 1.82
108 109 9.370930 TCAAATGGAGATATCCAATAAGCATTT 57.629 29.630 14.17 4.64 43.83 2.32
109 110 8.945195 TCAAATGGAGATATCCAATAAGCATT 57.055 30.769 14.17 0.00 43.83 3.56
110 111 8.945195 TTCAAATGGAGATATCCAATAAGCAT 57.055 30.769 14.17 0.00 43.83 3.79
111 112 7.040201 GCTTCAAATGGAGATATCCAATAAGCA 60.040 37.037 26.61 9.17 43.83 3.91
112 113 7.311408 GCTTCAAATGGAGATATCCAATAAGC 58.689 38.462 21.87 21.87 43.83 3.09
113 114 7.668886 AGGCTTCAAATGGAGATATCCAATAAG 59.331 37.037 14.17 14.26 43.83 1.73
114 115 7.529555 AGGCTTCAAATGGAGATATCCAATAA 58.470 34.615 14.17 4.73 43.83 1.40
115 116 7.095183 AGGCTTCAAATGGAGATATCCAATA 57.905 36.000 14.17 0.00 43.83 1.90
116 117 5.961897 AGGCTTCAAATGGAGATATCCAAT 58.038 37.500 14.17 1.15 43.83 3.16
117 118 5.103982 TGAGGCTTCAAATGGAGATATCCAA 60.104 40.000 14.17 0.00 43.83 3.53
118 119 4.413189 TGAGGCTTCAAATGGAGATATCCA 59.587 41.667 12.35 12.35 44.85 3.41
119 120 4.978099 TGAGGCTTCAAATGGAGATATCC 58.022 43.478 0.00 0.00 0.00 2.59
120 121 6.713903 TCATTGAGGCTTCAAATGGAGATATC 59.286 38.462 15.81 0.00 45.82 1.63
121 122 6.607970 TCATTGAGGCTTCAAATGGAGATAT 58.392 36.000 15.81 0.00 45.82 1.63
122 123 6.005066 TCATTGAGGCTTCAAATGGAGATA 57.995 37.500 15.81 0.00 45.82 1.98
123 124 4.863548 TCATTGAGGCTTCAAATGGAGAT 58.136 39.130 15.81 0.00 45.82 2.75
124 125 4.305539 TCATTGAGGCTTCAAATGGAGA 57.694 40.909 15.81 6.21 45.82 3.71
125 126 5.395682 TTTCATTGAGGCTTCAAATGGAG 57.604 39.130 15.81 4.04 45.82 3.86
126 127 5.804944 TTTTCATTGAGGCTTCAAATGGA 57.195 34.783 15.81 10.53 45.82 3.41
191 192 9.597170 CAGCTGATTACATATAAGCATCATACT 57.403 33.333 8.42 0.00 36.17 2.12
192 193 9.591792 TCAGCTGATTACATATAAGCATCATAC 57.408 33.333 13.74 0.00 36.17 2.39
193 194 9.591792 GTCAGCTGATTACATATAAGCATCATA 57.408 33.333 21.47 0.00 36.17 2.15
194 195 7.277319 CGTCAGCTGATTACATATAAGCATCAT 59.723 37.037 21.47 0.00 36.17 2.45
195 196 6.587608 CGTCAGCTGATTACATATAAGCATCA 59.412 38.462 21.47 0.00 36.17 3.07
196 197 6.587990 ACGTCAGCTGATTACATATAAGCATC 59.412 38.462 21.47 0.00 36.17 3.91
197 198 6.367149 CACGTCAGCTGATTACATATAAGCAT 59.633 38.462 21.47 0.00 36.17 3.79
198 199 5.691754 CACGTCAGCTGATTACATATAAGCA 59.308 40.000 21.47 0.00 34.34 3.91
199 200 5.388890 GCACGTCAGCTGATTACATATAAGC 60.389 44.000 21.47 8.69 0.00 3.09
200 201 5.691754 TGCACGTCAGCTGATTACATATAAG 59.308 40.000 21.47 0.00 34.99 1.73
201 202 5.596845 TGCACGTCAGCTGATTACATATAA 58.403 37.500 21.47 0.00 34.99 0.98
202 203 5.195001 TGCACGTCAGCTGATTACATATA 57.805 39.130 21.47 0.00 34.99 0.86
203 204 4.058721 TGCACGTCAGCTGATTACATAT 57.941 40.909 21.47 0.00 34.99 1.78
204 205 3.518634 TGCACGTCAGCTGATTACATA 57.481 42.857 21.47 2.56 34.99 2.29
205 206 2.385013 TGCACGTCAGCTGATTACAT 57.615 45.000 21.47 0.86 34.99 2.29
206 207 2.162319 TTGCACGTCAGCTGATTACA 57.838 45.000 21.47 13.12 34.99 2.41
207 208 2.726066 GCTTTGCACGTCAGCTGATTAC 60.726 50.000 21.47 10.60 34.99 1.89
208 209 1.464608 GCTTTGCACGTCAGCTGATTA 59.535 47.619 21.47 1.98 34.99 1.75
209 210 0.239347 GCTTTGCACGTCAGCTGATT 59.761 50.000 21.47 7.38 34.99 2.57
210 211 0.886043 TGCTTTGCACGTCAGCTGAT 60.886 50.000 21.47 0.83 34.42 2.90
211 212 1.523484 TGCTTTGCACGTCAGCTGA 60.523 52.632 13.74 13.74 34.42 4.26
212 213 3.024784 TGCTTTGCACGTCAGCTG 58.975 55.556 7.63 7.63 34.42 4.24
221 222 4.822036 AGTAATTTGTACGTGCTTTGCA 57.178 36.364 4.97 0.00 35.60 4.08
222 223 5.923665 ACTAGTAATTTGTACGTGCTTTGC 58.076 37.500 4.97 0.47 0.00 3.68
223 224 9.472995 CAATACTAGTAATTTGTACGTGCTTTG 57.527 33.333 6.70 0.00 0.00 2.77
224 225 8.173130 GCAATACTAGTAATTTGTACGTGCTTT 58.827 33.333 6.70 0.00 33.04 3.51
225 226 7.332430 TGCAATACTAGTAATTTGTACGTGCTT 59.668 33.333 6.70 0.00 34.93 3.91
226 227 6.814644 TGCAATACTAGTAATTTGTACGTGCT 59.185 34.615 6.70 0.00 34.93 4.40
227 228 6.898189 GTGCAATACTAGTAATTTGTACGTGC 59.102 38.462 16.58 0.00 34.69 5.34
228 229 8.181487 AGTGCAATACTAGTAATTTGTACGTG 57.819 34.615 21.54 7.29 38.96 4.49
229 230 9.859427 TTAGTGCAATACTAGTAATTTGTACGT 57.141 29.630 21.54 15.83 42.57 3.57
233 234 9.226606 TGCTTTAGTGCAATACTAGTAATTTGT 57.773 29.630 6.70 0.00 42.57 2.83
248 249 4.024048 GCAGTTAACTCTTGCTTTAGTGCA 60.024 41.667 4.77 0.00 41.65 4.57
249 250 4.024048 TGCAGTTAACTCTTGCTTTAGTGC 60.024 41.667 16.46 9.59 0.00 4.40
250 251 5.673337 TGCAGTTAACTCTTGCTTTAGTG 57.327 39.130 16.46 0.48 0.00 2.74
251 252 7.979444 TTATGCAGTTAACTCTTGCTTTAGT 57.021 32.000 16.46 4.10 0.00 2.24
252 253 9.846248 AATTTATGCAGTTAACTCTTGCTTTAG 57.154 29.630 16.46 0.73 0.00 1.85
253 254 9.624697 CAATTTATGCAGTTAACTCTTGCTTTA 57.375 29.630 16.46 8.04 0.00 1.85
254 255 7.599998 CCAATTTATGCAGTTAACTCTTGCTTT 59.400 33.333 16.46 8.79 0.00 3.51
255 256 7.092716 CCAATTTATGCAGTTAACTCTTGCTT 58.907 34.615 16.46 13.28 0.00 3.91
256 257 6.624423 CCAATTTATGCAGTTAACTCTTGCT 58.376 36.000 16.46 7.37 0.00 3.91
257 258 5.289434 GCCAATTTATGCAGTTAACTCTTGC 59.711 40.000 4.77 8.25 0.00 4.01
258 259 5.512788 CGCCAATTTATGCAGTTAACTCTTG 59.487 40.000 4.77 0.00 0.00 3.02
259 260 5.183140 ACGCCAATTTATGCAGTTAACTCTT 59.817 36.000 4.77 2.50 0.00 2.85
260 261 4.700213 ACGCCAATTTATGCAGTTAACTCT 59.300 37.500 4.77 0.00 0.00 3.24
261 262 4.981794 ACGCCAATTTATGCAGTTAACTC 58.018 39.130 4.77 1.77 0.00 3.01
262 263 5.048364 TCAACGCCAATTTATGCAGTTAACT 60.048 36.000 1.12 1.12 0.00 2.24
263 264 5.157781 TCAACGCCAATTTATGCAGTTAAC 58.842 37.500 0.00 0.00 0.00 2.01
264 265 5.378292 TCAACGCCAATTTATGCAGTTAA 57.622 34.783 0.00 0.00 0.00 2.01
265 266 5.574891 ATCAACGCCAATTTATGCAGTTA 57.425 34.783 0.00 0.00 0.00 2.24
266 267 3.932545 TCAACGCCAATTTATGCAGTT 57.067 38.095 0.00 0.00 0.00 3.16
349 350 4.346734 TCGATGTAAACGGTGTACTCTC 57.653 45.455 9.74 5.96 30.83 3.20
353 354 5.279384 AGATGATCGATGTAAACGGTGTAC 58.721 41.667 0.54 1.35 30.83 2.90
354 355 5.509716 AGATGATCGATGTAAACGGTGTA 57.490 39.130 0.54 0.00 30.83 2.90
360 361 7.595502 CCTAACAGGTAGATGATCGATGTAAAC 59.404 40.741 0.54 0.00 30.50 2.01
361 362 7.658261 CCTAACAGGTAGATGATCGATGTAAA 58.342 38.462 0.54 0.00 30.50 2.01
482 494 7.357303 GCCGTTGAGAAGTCAAGTTAATTAAA 58.643 34.615 0.00 0.00 43.55 1.52
515 533 2.162208 GTGGATTGATGTTGACGCATGT 59.838 45.455 0.00 0.00 0.00 3.21
535 553 9.747898 AGTAATATAGTAGCTAGATCAAGCAGT 57.252 33.333 0.00 0.00 45.30 4.40
557 575 9.797556 CATGTGTAAGCTATTGTGTAGTAGTAA 57.202 33.333 0.00 0.00 0.00 2.24
558 576 9.181061 TCATGTGTAAGCTATTGTGTAGTAGTA 57.819 33.333 0.00 0.00 0.00 1.82
559 577 7.974501 GTCATGTGTAAGCTATTGTGTAGTAGT 59.025 37.037 0.00 0.00 0.00 2.73
560 578 7.435488 GGTCATGTGTAAGCTATTGTGTAGTAG 59.565 40.741 0.00 0.00 0.00 2.57
561 579 7.262772 GGTCATGTGTAAGCTATTGTGTAGTA 58.737 38.462 0.00 0.00 0.00 1.82
563 581 5.232202 CGGTCATGTGTAAGCTATTGTGTAG 59.768 44.000 0.00 0.00 0.00 2.74
564 582 5.106442 CGGTCATGTGTAAGCTATTGTGTA 58.894 41.667 0.00 0.00 0.00 2.90
566 584 3.309682 CCGGTCATGTGTAAGCTATTGTG 59.690 47.826 0.00 0.00 0.00 3.33
569 587 3.906720 ACCGGTCATGTGTAAGCTATT 57.093 42.857 0.00 0.00 0.00 1.73
570 588 3.196901 TGAACCGGTCATGTGTAAGCTAT 59.803 43.478 8.04 0.00 0.00 2.97
607 804 0.464373 AACCCTGATGGCTACATGCG 60.464 55.000 0.00 0.00 44.05 4.73
615 832 0.464554 GGCTCACTAACCCTGATGGC 60.465 60.000 0.00 0.00 37.83 4.40
695 929 0.179094 GGGCGTCGGTGATGATACAA 60.179 55.000 0.00 0.00 0.00 2.41
696 930 1.040893 AGGGCGTCGGTGATGATACA 61.041 55.000 0.00 0.00 0.00 2.29
697 931 0.318784 GAGGGCGTCGGTGATGATAC 60.319 60.000 0.00 0.00 0.00 2.24
716 953 4.579384 ACAACCCAGTGGCACCGG 62.579 66.667 15.27 14.13 33.59 5.28
803 1055 1.128147 GCGGATCTTTTTGCTTCGCG 61.128 55.000 0.00 0.00 32.72 5.87
804 1056 0.109781 TGCGGATCTTTTTGCTTCGC 60.110 50.000 0.00 0.00 41.68 4.70
805 1057 2.330231 TTGCGGATCTTTTTGCTTCG 57.670 45.000 0.00 0.00 0.00 3.79
844 1096 3.379452 AGCAATCCAAGACCTAGCTAGT 58.621 45.455 19.31 7.69 0.00 2.57
847 1138 1.137872 CGAGCAATCCAAGACCTAGCT 59.862 52.381 0.00 0.00 0.00 3.32
861 1152 2.612972 GGCTGCTTATATAGGCGAGCAA 60.613 50.000 26.63 8.02 43.75 3.91
988 1313 0.319813 GCCGCCATTGTTTCAAGCTT 60.320 50.000 0.00 0.00 0.00 3.74
1225 1553 9.472361 GAACAAGTTCTTGTATTGAGTAGTACA 57.528 33.333 16.84 0.00 36.69 2.90
1236 1564 8.154649 ACGAATTCTTGAACAAGTTCTTGTAT 57.845 30.769 16.84 8.71 40.14 2.29
1238 1566 6.436843 ACGAATTCTTGAACAAGTTCTTGT 57.563 33.333 11.75 11.75 40.14 3.16
1245 1573 4.928661 ATCGGACGAATTCTTGAACAAG 57.071 40.909 3.52 8.09 39.71 3.16
1246 1574 6.788684 TTAATCGGACGAATTCTTGAACAA 57.211 33.333 3.52 0.00 0.00 2.83
1247 1575 6.592220 TGATTAATCGGACGAATTCTTGAACA 59.408 34.615 10.80 0.00 0.00 3.18
1248 1576 7.000575 TGATTAATCGGACGAATTCTTGAAC 57.999 36.000 10.80 0.00 0.00 3.18
1275 1619 6.357367 ACGAGTAGGGATTAATCAGCAAATT 58.643 36.000 17.07 0.00 0.00 1.82
1277 1621 5.353394 ACGAGTAGGGATTAATCAGCAAA 57.647 39.130 17.07 0.00 0.00 3.68
1343 1717 8.579682 GGCAAGTTAATCAGCCATTTAATTAG 57.420 34.615 9.35 0.00 46.26 1.73
1371 1745 5.474189 GGTGAGTACAGGATTAGTAGGCTAG 59.526 48.000 0.00 0.00 0.00 3.42
1386 1764 2.745037 GGTTGGCCGGTGAGTACA 59.255 61.111 1.90 0.00 0.00 2.90
1387 1765 2.046604 GGGTTGGCCGGTGAGTAC 60.047 66.667 1.90 0.00 34.97 2.73
1404 1782 3.818180 AGGAGGAAATTGATAGCTGCTG 58.182 45.455 13.43 0.00 0.00 4.41
1413 1791 8.359875 TGCATTGTAATTAAGGAGGAAATTGA 57.640 30.769 0.00 0.00 0.00 2.57
1416 1794 8.592809 TGTTTGCATTGTAATTAAGGAGGAAAT 58.407 29.630 0.00 0.00 0.00 2.17
1482 1867 1.762957 CAACCCTAGGTGACCATCGAT 59.237 52.381 8.29 0.00 35.34 3.59
1486 1871 2.038863 TCACAACCCTAGGTGACCAT 57.961 50.000 8.29 0.00 39.00 3.55
1545 1933 4.443266 GCGCTGAGCTTCTCCGGT 62.443 66.667 1.78 0.00 44.04 5.28
1653 2041 1.926561 CCGAGAAAGCGATGATGTCA 58.073 50.000 0.00 0.00 0.00 3.58
1765 2153 0.890683 GGGACGAGGAACTTAACCGA 59.109 55.000 0.00 0.00 41.55 4.69
1806 2194 1.286260 GACGAAGCTGTCCACGAGT 59.714 57.895 0.00 0.00 32.61 4.18
1845 2233 1.144093 CCGGAGAGGATGACTAGGTCT 59.856 57.143 0.00 0.00 45.00 3.85
2134 2522 0.819582 GGGATGTTGGCATTGTCCAG 59.180 55.000 12.64 0.00 37.44 3.86
2157 2545 1.679898 GAACCTGTCCTCCCACCAG 59.320 63.158 0.00 0.00 0.00 4.00
2289 2678 2.098871 CCATGCATGCACGTCGTG 59.901 61.111 25.37 21.02 36.51 4.35
2365 2795 5.046910 ACAACGATGGATGCTAAAACAAG 57.953 39.130 0.00 0.00 0.00 3.16
2397 2830 9.541143 GAGAATTGAACCAAGGAATAACAAAAA 57.459 29.630 0.00 0.00 0.00 1.94
2465 2898 8.765488 ATTTTCCCAAATCAAAGAAAATTGGT 57.235 26.923 4.23 0.00 43.07 3.67
2500 2933 7.658179 TGTTCAAAACATGTTACAGCAAAAA 57.342 28.000 12.39 0.00 36.25 1.94
2534 2967 6.115446 GGTTGAGATGTCATGTTGGAAGATA 58.885 40.000 0.00 0.00 30.85 1.98
2586 3019 2.548057 TGATTTGACTCTCGGCAACAAC 59.452 45.455 0.00 0.00 0.00 3.32
2588 3021 2.143122 GTGATTTGACTCTCGGCAACA 58.857 47.619 0.00 0.00 0.00 3.33
2610 3043 4.789802 GCTTACTGCTTTTTGTCGAGCTTT 60.790 41.667 0.00 0.00 39.60 3.51
2625 3058 2.593257 AGAAACGTACTCGCTTACTGC 58.407 47.619 0.00 0.00 41.18 4.40
2658 3092 1.153568 GCATGTAGCTGCCGAGTCA 60.154 57.895 0.00 0.00 41.15 3.41
2669 3103 2.959516 TCTCTCAACAACGGCATGTAG 58.040 47.619 0.00 0.00 32.02 2.74
2671 3105 2.254546 TTCTCTCAACAACGGCATGT 57.745 45.000 0.00 0.00 34.24 3.21
2689 3123 1.422402 TGCCGAGTTCCCTTTACCTTT 59.578 47.619 0.00 0.00 0.00 3.11
2755 3189 1.320344 TGTAGAGTACGGCCTGCCAG 61.320 60.000 9.17 3.86 35.37 4.85
2771 3205 1.876799 CCACGTGGCATGAACTTTGTA 59.123 47.619 24.02 0.00 0.00 2.41
2772 3206 0.667993 CCACGTGGCATGAACTTTGT 59.332 50.000 24.02 0.00 0.00 2.83
2799 3233 4.267349 AGCGGACTACACAACAACTATT 57.733 40.909 0.00 0.00 0.00 1.73
2800 3234 3.955650 AGCGGACTACACAACAACTAT 57.044 42.857 0.00 0.00 0.00 2.12
2814 3248 2.299521 ACTCAGTCTACCATAGCGGAC 58.700 52.381 0.00 0.00 38.63 4.79
2825 3259 3.006967 GGGAGCTCAACAAACTCAGTCTA 59.993 47.826 17.19 0.00 31.88 2.59
2851 3285 5.697633 ACGAAAGCTATTTCAAGTTCCGTAA 59.302 36.000 0.00 0.00 44.27 3.18
2868 3302 9.865484 GAAAAAGGATACATCTATAACGAAAGC 57.135 33.333 0.00 0.00 41.41 3.51
2880 3314 8.306761 ACATGGTGAAAAGAAAAAGGATACATC 58.693 33.333 0.00 0.00 41.41 3.06
2883 3317 9.010029 TCTACATGGTGAAAAGAAAAAGGATAC 57.990 33.333 0.00 0.00 0.00 2.24
2898 3332 2.147958 GCAAAACCGTCTACATGGTGA 58.852 47.619 0.00 0.00 41.58 4.02
2930 3364 4.262079 CCATTACCACCTACGAGAATCCTC 60.262 50.000 0.00 0.00 36.08 3.71
2931 3365 3.641906 CCATTACCACCTACGAGAATCCT 59.358 47.826 0.00 0.00 0.00 3.24
2932 3366 3.640029 TCCATTACCACCTACGAGAATCC 59.360 47.826 0.00 0.00 0.00 3.01
2933 3367 4.583489 TCTCCATTACCACCTACGAGAATC 59.417 45.833 0.00 0.00 0.00 2.52
2934 3368 4.341520 GTCTCCATTACCACCTACGAGAAT 59.658 45.833 0.00 0.00 0.00 2.40
2935 3369 3.698040 GTCTCCATTACCACCTACGAGAA 59.302 47.826 0.00 0.00 0.00 2.87
2936 3370 3.053842 AGTCTCCATTACCACCTACGAGA 60.054 47.826 0.00 0.00 0.00 4.04
2937 3371 3.066900 CAGTCTCCATTACCACCTACGAG 59.933 52.174 0.00 0.00 0.00 4.18
2938 3372 3.021695 CAGTCTCCATTACCACCTACGA 58.978 50.000 0.00 0.00 0.00 3.43
2939 3373 3.021695 TCAGTCTCCATTACCACCTACG 58.978 50.000 0.00 0.00 0.00 3.51
2940 3374 5.360591 CAATCAGTCTCCATTACCACCTAC 58.639 45.833 0.00 0.00 0.00 3.18
2941 3375 4.141711 GCAATCAGTCTCCATTACCACCTA 60.142 45.833 0.00 0.00 0.00 3.08
2942 3376 3.370953 GCAATCAGTCTCCATTACCACCT 60.371 47.826 0.00 0.00 0.00 4.00
2943 3377 2.945668 GCAATCAGTCTCCATTACCACC 59.054 50.000 0.00 0.00 0.00 4.61
2944 3378 3.878778 AGCAATCAGTCTCCATTACCAC 58.121 45.455 0.00 0.00 0.00 4.16
2945 3379 4.264253 CAAGCAATCAGTCTCCATTACCA 58.736 43.478 0.00 0.00 0.00 3.25
2946 3380 3.629398 CCAAGCAATCAGTCTCCATTACC 59.371 47.826 0.00 0.00 0.00 2.85
2947 3381 4.517285 TCCAAGCAATCAGTCTCCATTAC 58.483 43.478 0.00 0.00 0.00 1.89
2948 3382 4.471025 TCTCCAAGCAATCAGTCTCCATTA 59.529 41.667 0.00 0.00 0.00 1.90
2949 3383 3.265221 TCTCCAAGCAATCAGTCTCCATT 59.735 43.478 0.00 0.00 0.00 3.16
2950 3384 2.842496 TCTCCAAGCAATCAGTCTCCAT 59.158 45.455 0.00 0.00 0.00 3.41
2951 3385 2.259917 TCTCCAAGCAATCAGTCTCCA 58.740 47.619 0.00 0.00 0.00 3.86
2952 3386 3.204526 CATCTCCAAGCAATCAGTCTCC 58.795 50.000 0.00 0.00 0.00 3.71
2953 3387 3.204526 CCATCTCCAAGCAATCAGTCTC 58.795 50.000 0.00 0.00 0.00 3.36
2954 3388 2.575279 ACCATCTCCAAGCAATCAGTCT 59.425 45.455 0.00 0.00 0.00 3.24
2955 3389 2.681848 CACCATCTCCAAGCAATCAGTC 59.318 50.000 0.00 0.00 0.00 3.51
2956 3390 2.306805 TCACCATCTCCAAGCAATCAGT 59.693 45.455 0.00 0.00 0.00 3.41
2957 3391 2.681848 GTCACCATCTCCAAGCAATCAG 59.318 50.000 0.00 0.00 0.00 2.90
2958 3392 2.306805 AGTCACCATCTCCAAGCAATCA 59.693 45.455 0.00 0.00 0.00 2.57
2959 3393 2.941720 GAGTCACCATCTCCAAGCAATC 59.058 50.000 0.00 0.00 0.00 2.67
2960 3394 2.575279 AGAGTCACCATCTCCAAGCAAT 59.425 45.455 0.00 0.00 32.93 3.56
2961 3395 1.980765 AGAGTCACCATCTCCAAGCAA 59.019 47.619 0.00 0.00 32.93 3.91
2962 3396 1.552337 GAGAGTCACCATCTCCAAGCA 59.448 52.381 0.00 0.00 37.77 3.91
2963 3397 1.830477 AGAGAGTCACCATCTCCAAGC 59.170 52.381 0.00 0.00 43.53 4.01
2964 3398 2.168106 CCAGAGAGTCACCATCTCCAAG 59.832 54.545 0.00 0.00 43.53 3.61
2965 3399 2.182827 CCAGAGAGTCACCATCTCCAA 58.817 52.381 0.00 0.00 43.53 3.53
2966 3400 1.359130 TCCAGAGAGTCACCATCTCCA 59.641 52.381 0.00 0.00 43.53 3.86
2967 3401 2.151502 TCCAGAGAGTCACCATCTCC 57.848 55.000 0.00 0.00 43.53 3.71
2968 3402 2.828520 TGTTCCAGAGAGTCACCATCTC 59.171 50.000 0.00 0.00 42.95 2.75
2969 3403 2.564947 GTGTTCCAGAGAGTCACCATCT 59.435 50.000 0.00 0.00 0.00 2.90
2970 3404 2.564947 AGTGTTCCAGAGAGTCACCATC 59.435 50.000 0.00 0.00 32.61 3.51
2971 3405 2.564947 GAGTGTTCCAGAGAGTCACCAT 59.435 50.000 0.00 0.00 32.61 3.55
2972 3406 1.964223 GAGTGTTCCAGAGAGTCACCA 59.036 52.381 0.00 0.00 32.61 4.17
2973 3407 1.068194 CGAGTGTTCCAGAGAGTCACC 60.068 57.143 0.00 0.00 32.61 4.02
2974 3408 1.667467 GCGAGTGTTCCAGAGAGTCAC 60.667 57.143 0.00 0.00 0.00 3.67
2975 3409 0.598562 GCGAGTGTTCCAGAGAGTCA 59.401 55.000 0.00 0.00 0.00 3.41
2976 3410 0.109039 GGCGAGTGTTCCAGAGAGTC 60.109 60.000 0.00 0.00 0.00 3.36
2977 3411 0.827925 TGGCGAGTGTTCCAGAGAGT 60.828 55.000 0.00 0.00 0.00 3.24
2978 3412 0.389166 GTGGCGAGTGTTCCAGAGAG 60.389 60.000 0.00 0.00 32.15 3.20
2979 3413 1.112916 TGTGGCGAGTGTTCCAGAGA 61.113 55.000 0.00 0.00 32.15 3.10
2980 3414 0.249868 TTGTGGCGAGTGTTCCAGAG 60.250 55.000 0.00 0.00 32.15 3.35
2981 3415 0.396435 ATTGTGGCGAGTGTTCCAGA 59.604 50.000 0.00 0.00 32.15 3.86
2982 3416 1.197721 GAATTGTGGCGAGTGTTCCAG 59.802 52.381 0.00 0.00 32.15 3.86
2983 3417 1.202758 AGAATTGTGGCGAGTGTTCCA 60.203 47.619 0.00 0.00 0.00 3.53
2984 3418 1.464997 GAGAATTGTGGCGAGTGTTCC 59.535 52.381 0.00 0.00 0.00 3.62
2985 3419 1.126846 CGAGAATTGTGGCGAGTGTTC 59.873 52.381 0.00 0.00 0.00 3.18
2986 3420 1.148310 CGAGAATTGTGGCGAGTGTT 58.852 50.000 0.00 0.00 0.00 3.32
2987 3421 0.670546 CCGAGAATTGTGGCGAGTGT 60.671 55.000 0.00 0.00 0.00 3.55
2988 3422 0.670546 ACCGAGAATTGTGGCGAGTG 60.671 55.000 0.00 0.00 0.00 3.51
2989 3423 0.389948 GACCGAGAATTGTGGCGAGT 60.390 55.000 0.00 0.00 0.00 4.18
2990 3424 0.389817 TGACCGAGAATTGTGGCGAG 60.390 55.000 0.00 0.00 0.00 5.03
2991 3425 0.034198 TTGACCGAGAATTGTGGCGA 59.966 50.000 0.00 0.00 0.00 5.54
2992 3426 1.086696 ATTGACCGAGAATTGTGGCG 58.913 50.000 0.00 0.00 0.00 5.69
2993 3427 2.867429 CAATTGACCGAGAATTGTGGC 58.133 47.619 0.00 0.00 36.47 5.01
3058 3492 9.846248 GTTTACATGCTGAATATCAAAAAGAGT 57.154 29.630 0.00 0.00 0.00 3.24
3059 3493 9.844790 TGTTTACATGCTGAATATCAAAAAGAG 57.155 29.630 0.00 0.00 0.00 2.85
3060 3494 9.844790 CTGTTTACATGCTGAATATCAAAAAGA 57.155 29.630 0.00 0.00 0.00 2.52
3061 3495 9.079833 CCTGTTTACATGCTGAATATCAAAAAG 57.920 33.333 0.00 0.00 0.00 2.27
3062 3496 8.584157 ACCTGTTTACATGCTGAATATCAAAAA 58.416 29.630 0.00 0.00 0.00 1.94
3063 3497 8.121305 ACCTGTTTACATGCTGAATATCAAAA 57.879 30.769 0.00 0.00 0.00 2.44
3064 3498 7.392953 TGACCTGTTTACATGCTGAATATCAAA 59.607 33.333 0.00 0.00 0.00 2.69
3065 3499 6.883756 TGACCTGTTTACATGCTGAATATCAA 59.116 34.615 0.00 0.00 0.00 2.57
3066 3500 6.413892 TGACCTGTTTACATGCTGAATATCA 58.586 36.000 0.00 0.00 0.00 2.15
3067 3501 6.512415 GCTGACCTGTTTACATGCTGAATATC 60.512 42.308 0.00 0.00 0.00 1.63
3068 3502 5.297776 GCTGACCTGTTTACATGCTGAATAT 59.702 40.000 0.00 0.00 0.00 1.28
3069 3503 4.635765 GCTGACCTGTTTACATGCTGAATA 59.364 41.667 0.00 0.00 0.00 1.75
3070 3504 3.441572 GCTGACCTGTTTACATGCTGAAT 59.558 43.478 0.00 0.00 0.00 2.57
3071 3505 2.813754 GCTGACCTGTTTACATGCTGAA 59.186 45.455 0.00 0.00 0.00 3.02
3072 3506 2.038952 AGCTGACCTGTTTACATGCTGA 59.961 45.455 0.00 0.00 0.00 4.26
3073 3507 2.430465 AGCTGACCTGTTTACATGCTG 58.570 47.619 0.00 0.00 0.00 4.41
3074 3508 2.867109 AGCTGACCTGTTTACATGCT 57.133 45.000 0.00 0.00 0.00 3.79
3075 3509 6.073003 GGATATTAGCTGACCTGTTTACATGC 60.073 42.308 0.00 0.00 0.00 4.06
3076 3510 6.428159 GGGATATTAGCTGACCTGTTTACATG 59.572 42.308 0.00 0.00 0.00 3.21
3077 3511 6.534634 GGGATATTAGCTGACCTGTTTACAT 58.465 40.000 0.00 0.00 0.00 2.29
3078 3512 5.452776 CGGGATATTAGCTGACCTGTTTACA 60.453 44.000 0.00 0.00 0.00 2.41
3079 3513 4.989168 CGGGATATTAGCTGACCTGTTTAC 59.011 45.833 0.00 0.00 0.00 2.01
3080 3514 4.039973 CCGGGATATTAGCTGACCTGTTTA 59.960 45.833 0.00 0.00 0.00 2.01
3081 3515 3.181454 CCGGGATATTAGCTGACCTGTTT 60.181 47.826 0.00 0.00 0.00 2.83
3082 3516 2.368875 CCGGGATATTAGCTGACCTGTT 59.631 50.000 0.00 0.00 0.00 3.16
3083 3517 1.971357 CCGGGATATTAGCTGACCTGT 59.029 52.381 0.00 0.00 0.00 4.00
3084 3518 1.338200 GCCGGGATATTAGCTGACCTG 60.338 57.143 2.18 0.00 0.00 4.00
3085 3519 0.977395 GCCGGGATATTAGCTGACCT 59.023 55.000 2.18 0.00 0.00 3.85
3086 3520 0.389948 CGCCGGGATATTAGCTGACC 60.390 60.000 2.18 0.00 0.00 4.02
3087 3521 1.014564 GCGCCGGGATATTAGCTGAC 61.015 60.000 2.18 0.00 0.00 3.51
3088 3522 1.292223 GCGCCGGGATATTAGCTGA 59.708 57.895 2.18 0.00 0.00 4.26
3089 3523 0.391661 ATGCGCCGGGATATTAGCTG 60.392 55.000 4.18 0.00 0.00 4.24
3090 3524 0.108138 GATGCGCCGGGATATTAGCT 60.108 55.000 4.18 0.00 0.00 3.32
3091 3525 0.108138 AGATGCGCCGGGATATTAGC 60.108 55.000 4.18 0.00 0.00 3.09
3092 3526 2.386661 AAGATGCGCCGGGATATTAG 57.613 50.000 4.18 0.00 0.00 1.73
3093 3527 2.224426 ACAAAGATGCGCCGGGATATTA 60.224 45.455 4.18 0.00 0.00 0.98
3094 3528 1.238439 CAAAGATGCGCCGGGATATT 58.762 50.000 4.18 0.00 0.00 1.28
3095 3529 0.108585 ACAAAGATGCGCCGGGATAT 59.891 50.000 4.18 0.00 0.00 1.63
3096 3530 0.813610 CACAAAGATGCGCCGGGATA 60.814 55.000 4.18 0.00 0.00 2.59
3097 3531 2.114670 CACAAAGATGCGCCGGGAT 61.115 57.895 4.18 0.00 0.00 3.85
3098 3532 2.745884 CACAAAGATGCGCCGGGA 60.746 61.111 4.18 0.00 0.00 5.14
3099 3533 4.481112 GCACAAAGATGCGCCGGG 62.481 66.667 4.18 0.00 35.50 5.73
3121 3555 2.095617 TCACATTCAGAATGCAAGCGTG 60.096 45.455 21.22 11.81 42.69 5.34
3122 3556 2.095567 GTCACATTCAGAATGCAAGCGT 60.096 45.455 21.22 0.00 42.69 5.07
3123 3557 2.512885 GTCACATTCAGAATGCAAGCG 58.487 47.619 21.22 6.85 42.69 4.68
3124 3558 2.730090 CGGTCACATTCAGAATGCAAGC 60.730 50.000 21.22 16.92 42.69 4.01
3125 3559 2.743664 TCGGTCACATTCAGAATGCAAG 59.256 45.455 21.22 12.41 42.69 4.01
3126 3560 2.777094 TCGGTCACATTCAGAATGCAA 58.223 42.857 21.22 8.28 42.69 4.08
3127 3561 2.470983 TCGGTCACATTCAGAATGCA 57.529 45.000 21.22 7.11 42.69 3.96
3128 3562 3.059325 GCTATCGGTCACATTCAGAATGC 60.059 47.826 21.22 6.84 42.69 3.56
3129 3563 4.210746 CAGCTATCGGTCACATTCAGAATG 59.789 45.833 19.93 19.93 44.48 2.67
3130 3564 4.375272 CAGCTATCGGTCACATTCAGAAT 58.625 43.478 0.00 0.00 0.00 2.40
3131 3565 3.430790 CCAGCTATCGGTCACATTCAGAA 60.431 47.826 0.00 0.00 0.00 3.02
3132 3566 2.101415 CCAGCTATCGGTCACATTCAGA 59.899 50.000 0.00 0.00 0.00 3.27
3133 3567 2.477825 CCAGCTATCGGTCACATTCAG 58.522 52.381 0.00 0.00 0.00 3.02
3134 3568 1.473257 GCCAGCTATCGGTCACATTCA 60.473 52.381 0.00 0.00 0.00 2.57
3135 3569 1.202580 AGCCAGCTATCGGTCACATTC 60.203 52.381 0.00 0.00 0.00 2.67
3136 3570 0.833287 AGCCAGCTATCGGTCACATT 59.167 50.000 0.00 0.00 0.00 2.71
3137 3571 0.833287 AAGCCAGCTATCGGTCACAT 59.167 50.000 0.00 0.00 0.00 3.21
3138 3572 1.480789 TAAGCCAGCTATCGGTCACA 58.519 50.000 0.00 0.00 0.00 3.58
3139 3573 2.474816 CTTAAGCCAGCTATCGGTCAC 58.525 52.381 0.00 0.00 0.00 3.67
3140 3574 1.412710 CCTTAAGCCAGCTATCGGTCA 59.587 52.381 0.00 0.00 0.00 4.02
3141 3575 1.687123 TCCTTAAGCCAGCTATCGGTC 59.313 52.381 0.00 0.00 0.00 4.79
3142 3576 1.689273 CTCCTTAAGCCAGCTATCGGT 59.311 52.381 0.00 0.00 0.00 4.69
3143 3577 1.964223 TCTCCTTAAGCCAGCTATCGG 59.036 52.381 0.00 0.00 0.00 4.18
3144 3578 2.625790 AGTCTCCTTAAGCCAGCTATCG 59.374 50.000 0.00 0.00 0.00 2.92
3145 3579 3.006430 GGAGTCTCCTTAAGCCAGCTATC 59.994 52.174 12.02 0.00 32.53 2.08
3146 3580 2.969262 GGAGTCTCCTTAAGCCAGCTAT 59.031 50.000 12.02 0.00 32.53 2.97
3147 3581 2.389715 GGAGTCTCCTTAAGCCAGCTA 58.610 52.381 12.02 0.00 32.53 3.32
3148 3582 1.199615 GGAGTCTCCTTAAGCCAGCT 58.800 55.000 12.02 0.00 32.53 4.24
3149 3583 0.179097 CGGAGTCTCCTTAAGCCAGC 60.179 60.000 17.00 0.00 33.30 4.85
3150 3584 0.461961 CCGGAGTCTCCTTAAGCCAG 59.538 60.000 17.00 0.00 33.30 4.85
3151 3585 0.252103 ACCGGAGTCTCCTTAAGCCA 60.252 55.000 17.00 0.00 33.30 4.75
3152 3586 0.903236 AACCGGAGTCTCCTTAAGCC 59.097 55.000 17.00 0.00 33.30 4.35
3153 3587 2.764439 AAACCGGAGTCTCCTTAAGC 57.236 50.000 17.00 0.00 33.30 3.09
3173 3607 2.093235 CCAAAAGGCTGGTCACCAAAAA 60.093 45.455 0.00 0.00 30.80 1.94
3174 3608 1.484240 CCAAAAGGCTGGTCACCAAAA 59.516 47.619 0.00 0.00 30.80 2.44
3175 3609 1.118838 CCAAAAGGCTGGTCACCAAA 58.881 50.000 0.00 0.00 30.80 3.28
3176 3610 1.398958 GCCAAAAGGCTGGTCACCAA 61.399 55.000 0.00 0.00 38.86 3.67
3177 3611 1.832167 GCCAAAAGGCTGGTCACCA 60.832 57.895 0.00 0.00 38.86 4.17
3178 3612 1.531602 AGCCAAAAGGCTGGTCACC 60.532 57.895 8.44 0.00 44.22 4.02
3179 3613 4.181051 AGCCAAAAGGCTGGTCAC 57.819 55.556 8.44 0.00 44.22 3.67
3185 3619 4.757746 TGGGACAATCAGCCAAAAGGCT 62.758 50.000 2.59 2.59 40.48 4.58
3186 3620 0.247460 GGGACAATCAGCCAAAAGGC 59.753 55.000 0.00 0.00 0.00 4.35
3187 3621 1.631405 TGGGACAATCAGCCAAAAGG 58.369 50.000 0.00 0.00 31.92 3.11
3199 3633 7.967197 ATTCATATGAAGGTGTTCTTGGGACAA 60.967 37.037 21.97 0.00 39.95 3.18
3200 3634 4.288366 TCATATGAAGGTGTTCTTGGGACA 59.712 41.667 1.98 0.00 35.50 4.02
3201 3635 4.843728 TCATATGAAGGTGTTCTTGGGAC 58.156 43.478 1.98 0.00 35.50 4.46
3202 3636 5.512942 TTCATATGAAGGTGTTCTTGGGA 57.487 39.130 14.23 0.00 35.50 4.37
3203 3637 7.880160 TTATTCATATGAAGGTGTTCTTGGG 57.120 36.000 21.97 0.00 37.48 4.12
3204 3638 7.917505 GCTTTATTCATATGAAGGTGTTCTTGG 59.082 37.037 21.97 6.47 37.48 3.61
3205 3639 8.680903 AGCTTTATTCATATGAAGGTGTTCTTG 58.319 33.333 21.97 7.56 36.91 3.02
3206 3640 8.814038 AGCTTTATTCATATGAAGGTGTTCTT 57.186 30.769 21.97 6.71 36.91 2.52
3207 3641 8.814038 AAGCTTTATTCATATGAAGGTGTTCT 57.186 30.769 21.97 12.00 37.90 3.01
3208 3642 9.508567 GAAAGCTTTATTCATATGAAGGTGTTC 57.491 33.333 21.97 14.14 37.90 3.18
3209 3643 9.247861 AGAAAGCTTTATTCATATGAAGGTGTT 57.752 29.630 21.97 8.73 37.90 3.32
3210 3644 8.680903 CAGAAAGCTTTATTCATATGAAGGTGT 58.319 33.333 21.97 10.02 37.90 4.16
3211 3645 8.133627 CCAGAAAGCTTTATTCATATGAAGGTG 58.866 37.037 21.97 13.15 37.90 4.00
3212 3646 7.836183 ACCAGAAAGCTTTATTCATATGAAGGT 59.164 33.333 21.97 15.52 39.06 3.50
3213 3647 8.230472 ACCAGAAAGCTTTATTCATATGAAGG 57.770 34.615 21.97 14.96 37.48 3.46
3216 3650 8.686334 GGAAACCAGAAAGCTTTATTCATATGA 58.314 33.333 12.68 0.00 0.00 2.15
3217 3651 8.862550 GGAAACCAGAAAGCTTTATTCATATG 57.137 34.615 12.68 0.00 0.00 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.