Multiple sequence alignment - TraesCS7A01G094300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G094300 chr7A 100.000 3428 0 0 1 3428 57744134 57747561 0.000000e+00 6331.0
1 TraesCS7A01G094300 chr7A 81.935 155 21 5 2212 2363 57885092 57884942 1.290000e-24 124.0
2 TraesCS7A01G094300 chr7D 90.541 2421 177 27 1 2400 54233719 54236108 0.000000e+00 3155.0
3 TraesCS7A01G094300 chr7D 96.130 646 22 3 2785 3428 617969812 617969168 0.000000e+00 1051.0
4 TraesCS7A01G094300 chr7D 80.609 1346 208 35 1080 2385 54258363 54259695 0.000000e+00 990.0
5 TraesCS7A01G094300 chr7D 81.681 797 136 7 991 1784 54585209 54584420 0.000000e+00 654.0
6 TraesCS7A01G094300 chr7D 87.124 466 53 5 1931 2393 54576477 54576016 3.920000e-144 521.0
7 TraesCS7A01G094300 chr7D 72.885 461 92 25 1947 2394 54369988 54369548 9.990000e-26 128.0
8 TraesCS7A01G094300 chr4A 91.643 1077 77 6 750 1815 669820679 669821753 0.000000e+00 1478.0
9 TraesCS7A01G094300 chr4A 95.975 646 24 2 2785 3428 154356648 154357293 0.000000e+00 1048.0
10 TraesCS7A01G094300 chr4A 79.151 1343 223 36 1085 2393 669835438 669836757 0.000000e+00 876.0
11 TraesCS7A01G094300 chr4A 91.077 594 41 9 1810 2400 669822208 669822792 0.000000e+00 793.0
12 TraesCS7A01G094300 chr4A 84.279 617 56 22 1 608 669820092 669820676 6.420000e-157 564.0
13 TraesCS7A01G094300 chr2D 95.672 647 25 3 2784 3428 394097235 394097880 0.000000e+00 1037.0
14 TraesCS7A01G094300 chr2D 95.659 645 25 3 2785 3428 638286056 638285414 0.000000e+00 1033.0
15 TraesCS7A01G094300 chr2D 95.511 646 26 3 2784 3428 23546703 23546060 0.000000e+00 1029.0
16 TraesCS7A01G094300 chr2D 80.392 306 43 8 152 448 448197467 448197170 2.070000e-52 217.0
17 TraesCS7A01G094300 chr3D 95.518 647 27 2 2783 3428 577540426 577539781 0.000000e+00 1033.0
18 TraesCS7A01G094300 chr3D 82.386 176 21 8 270 440 290593865 290593695 9.910000e-31 145.0
19 TraesCS7A01G094300 chr6D 95.504 645 27 2 2785 3428 121261870 121262513 0.000000e+00 1029.0
20 TraesCS7A01G094300 chr6D 95.349 645 28 2 2785 3428 4175476 4174833 0.000000e+00 1024.0
21 TraesCS7A01G094300 chr1D 95.356 646 27 3 2785 3428 79781225 79780581 0.000000e+00 1024.0
22 TraesCS7A01G094300 chr1D 78.713 202 28 9 183 374 265679690 265679886 1.670000e-23 121.0
23 TraesCS7A01G094300 chr3B 82.486 177 20 9 270 440 382709216 382709045 9.910000e-31 145.0
24 TraesCS7A01G094300 chr3B 85.333 75 7 3 2581 2653 644143322 644143394 1.320000e-09 75.0
25 TraesCS7A01G094300 chr3A 82.386 176 21 8 270 440 383096638 383096468 9.910000e-31 145.0
26 TraesCS7A01G094300 chr3A 94.444 36 2 0 2618 2653 401697980 401698015 4.780000e-04 56.5
27 TraesCS7A01G094300 chr6A 75.000 320 52 19 84 381 615435330 615435643 4.650000e-24 122.0
28 TraesCS7A01G094300 chr1A 78.283 198 28 9 183 370 324863285 324863477 2.800000e-21 113.0
29 TraesCS7A01G094300 chrUn 84.906 106 12 3 271 375 355692448 355692550 1.680000e-18 104.0
30 TraesCS7A01G094300 chrUn 85.437 103 11 3 274 375 389176228 389176129 1.680000e-18 104.0
31 TraesCS7A01G094300 chr7B 85.437 103 11 3 274 375 611251231 611251132 1.680000e-18 104.0
32 TraesCS7A01G094300 chr7B 100.000 29 0 0 2625 2653 663596130 663596158 2.000000e-03 54.7
33 TraesCS7A01G094300 chr4D 94.872 39 2 0 2615 2653 469616807 469616769 1.030000e-05 62.1
34 TraesCS7A01G094300 chr5D 96.875 32 1 0 2625 2656 264501084 264501053 2.000000e-03 54.7
35 TraesCS7A01G094300 chr5A 100.000 29 0 0 88 116 589374069 589374097 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G094300 chr7A 57744134 57747561 3427 False 6331 6331 100.000000 1 3428 1 chr7A.!!$F1 3427
1 TraesCS7A01G094300 chr7D 54233719 54236108 2389 False 3155 3155 90.541000 1 2400 1 chr7D.!!$F1 2399
2 TraesCS7A01G094300 chr7D 617969168 617969812 644 True 1051 1051 96.130000 2785 3428 1 chr7D.!!$R4 643
3 TraesCS7A01G094300 chr7D 54258363 54259695 1332 False 990 990 80.609000 1080 2385 1 chr7D.!!$F2 1305
4 TraesCS7A01G094300 chr7D 54584420 54585209 789 True 654 654 81.681000 991 1784 1 chr7D.!!$R3 793
5 TraesCS7A01G094300 chr4A 154356648 154357293 645 False 1048 1048 95.975000 2785 3428 1 chr4A.!!$F1 643
6 TraesCS7A01G094300 chr4A 669820092 669822792 2700 False 945 1478 88.999667 1 2400 3 chr4A.!!$F3 2399
7 TraesCS7A01G094300 chr4A 669835438 669836757 1319 False 876 876 79.151000 1085 2393 1 chr4A.!!$F2 1308
8 TraesCS7A01G094300 chr2D 394097235 394097880 645 False 1037 1037 95.672000 2784 3428 1 chr2D.!!$F1 644
9 TraesCS7A01G094300 chr2D 638285414 638286056 642 True 1033 1033 95.659000 2785 3428 1 chr2D.!!$R3 643
10 TraesCS7A01G094300 chr2D 23546060 23546703 643 True 1029 1029 95.511000 2784 3428 1 chr2D.!!$R1 644
11 TraesCS7A01G094300 chr3D 577539781 577540426 645 True 1033 1033 95.518000 2783 3428 1 chr3D.!!$R2 645
12 TraesCS7A01G094300 chr6D 121261870 121262513 643 False 1029 1029 95.504000 2785 3428 1 chr6D.!!$F1 643
13 TraesCS7A01G094300 chr6D 4174833 4175476 643 True 1024 1024 95.349000 2785 3428 1 chr6D.!!$R1 643
14 TraesCS7A01G094300 chr1D 79780581 79781225 644 True 1024 1024 95.356000 2785 3428 1 chr1D.!!$R1 643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
762 807 0.250513 GTCCGGCCTCTTCATTCAGT 59.749 55.0 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2700 3263 0.03601 AGATTCCAACTCGGCACCTG 60.036 55.0 0.0 0.0 33.14 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.095059 GTGCCACATGACATTCTTGACC 60.095 50.000 0.00 0.00 0.00 4.02
34 35 6.375174 CCACATGACATTCTTGACCTATGAAA 59.625 38.462 0.00 0.00 0.00 2.69
86 89 3.009723 AGTTTGTGGATATTCAGTGCCG 58.990 45.455 0.00 0.00 0.00 5.69
177 180 0.994263 GCAAAATGATTCAGTGCGCC 59.006 50.000 4.18 0.00 0.00 6.53
211 214 8.039538 TGCAAAATTTCATGGCTAAATGACATA 58.960 29.630 0.00 0.00 43.93 2.29
212 215 9.048446 GCAAAATTTCATGGCTAAATGACATAT 57.952 29.630 0.00 0.00 43.93 1.78
228 231 1.683385 CATATGAGGAGCTCGTGACCA 59.317 52.381 14.78 6.20 32.35 4.02
233 236 2.224523 TGAGGAGCTCGTGACCAAAAAT 60.225 45.455 14.78 0.00 32.35 1.82
268 271 5.853282 CAGTGCTATTTTCAAAAGTTCCTCG 59.147 40.000 0.00 0.00 0.00 4.63
279 282 0.693049 AGTTCCTCGCAGACCCAAAT 59.307 50.000 0.00 0.00 0.00 2.32
282 285 1.533625 TCCTCGCAGACCCAAATTTG 58.466 50.000 11.40 11.40 0.00 2.32
283 286 1.202879 TCCTCGCAGACCCAAATTTGT 60.203 47.619 16.73 0.00 0.00 2.83
284 287 1.200020 CCTCGCAGACCCAAATTTGTC 59.800 52.381 16.73 8.81 0.00 3.18
285 288 2.154462 CTCGCAGACCCAAATTTGTCT 58.846 47.619 16.73 10.89 42.41 3.41
320 323 3.074412 AGCTACCGAAATGTCCAAACTG 58.926 45.455 0.00 0.00 0.00 3.16
344 347 2.231235 GGAAATTTGGCACGGACTTCAT 59.769 45.455 0.00 0.00 0.00 2.57
443 460 0.620556 AGATGCACCCGAGAACCAAT 59.379 50.000 0.00 0.00 0.00 3.16
446 463 0.687920 TGCACCCGAGAACCAATACA 59.312 50.000 0.00 0.00 0.00 2.29
458 475 4.270084 AGAACCAATACACGCACATATTCG 59.730 41.667 0.00 0.00 0.00 3.34
480 497 3.181490 GCGGTTCAAGAGTTGTTTTTCCT 60.181 43.478 0.00 0.00 0.00 3.36
481 498 4.351192 CGGTTCAAGAGTTGTTTTTCCTG 58.649 43.478 0.00 0.00 0.00 3.86
482 499 4.095782 CGGTTCAAGAGTTGTTTTTCCTGA 59.904 41.667 0.00 0.00 0.00 3.86
483 500 5.582550 GGTTCAAGAGTTGTTTTTCCTGAG 58.417 41.667 0.00 0.00 0.00 3.35
484 501 5.125578 GGTTCAAGAGTTGTTTTTCCTGAGT 59.874 40.000 0.00 0.00 0.00 3.41
485 502 6.258899 GTTCAAGAGTTGTTTTTCCTGAGTC 58.741 40.000 0.00 0.00 0.00 3.36
486 503 4.881850 TCAAGAGTTGTTTTTCCTGAGTCC 59.118 41.667 0.00 0.00 0.00 3.85
487 504 4.779993 AGAGTTGTTTTTCCTGAGTCCT 57.220 40.909 0.00 0.00 0.00 3.85
495 512 1.352083 TTCCTGAGTCCTGACAAGGG 58.648 55.000 15.16 7.35 44.62 3.95
539 556 5.999600 TGTATTCATTGCTGGGATATCTGTG 59.000 40.000 2.05 0.00 0.00 3.66
596 613 8.931385 ATTGAAACAACATTATGCATAGTTCC 57.069 30.769 6.50 0.00 0.00 3.62
597 614 6.550843 TGAAACAACATTATGCATAGTTCCG 58.449 36.000 6.50 1.44 0.00 4.30
598 615 6.150307 TGAAACAACATTATGCATAGTTCCGT 59.850 34.615 6.50 2.01 0.00 4.69
599 616 5.734855 ACAACATTATGCATAGTTCCGTC 57.265 39.130 6.50 0.00 0.00 4.79
600 617 5.182487 ACAACATTATGCATAGTTCCGTCA 58.818 37.500 6.50 0.00 0.00 4.35
601 618 5.822519 ACAACATTATGCATAGTTCCGTCAT 59.177 36.000 6.50 0.00 0.00 3.06
602 619 6.318648 ACAACATTATGCATAGTTCCGTCATT 59.681 34.615 6.50 0.00 0.00 2.57
603 620 6.942532 ACATTATGCATAGTTCCGTCATTT 57.057 33.333 6.50 0.00 0.00 2.32
604 621 7.333528 ACATTATGCATAGTTCCGTCATTTT 57.666 32.000 6.50 0.00 0.00 1.82
605 622 7.417612 ACATTATGCATAGTTCCGTCATTTTC 58.582 34.615 6.50 0.00 0.00 2.29
606 623 6.993786 TTATGCATAGTTCCGTCATTTTCA 57.006 33.333 6.50 0.00 0.00 2.69
607 624 7.566760 TTATGCATAGTTCCGTCATTTTCAT 57.433 32.000 6.50 0.00 0.00 2.57
608 625 5.895636 TGCATAGTTCCGTCATTTTCATT 57.104 34.783 0.00 0.00 0.00 2.57
609 626 6.266168 TGCATAGTTCCGTCATTTTCATTT 57.734 33.333 0.00 0.00 0.00 2.32
610 627 6.686630 TGCATAGTTCCGTCATTTTCATTTT 58.313 32.000 0.00 0.00 0.00 1.82
611 628 7.151308 TGCATAGTTCCGTCATTTTCATTTTT 58.849 30.769 0.00 0.00 0.00 1.94
648 665 5.467063 GTCCCGTCATTTTCATATCCTCTTC 59.533 44.000 0.00 0.00 0.00 2.87
658 698 1.112113 TATCCTCTTCCTGACGGCAC 58.888 55.000 0.00 0.00 0.00 5.01
676 716 2.416431 GCACCCAGCATCTTGAATGAAC 60.416 50.000 0.00 0.00 44.79 3.18
731 776 8.666821 TGAATCAATCCTCTTCATATCCTTCAT 58.333 33.333 0.00 0.00 0.00 2.57
732 777 8.865420 AATCAATCCTCTTCATATCCTTCATG 57.135 34.615 0.00 0.00 0.00 3.07
733 778 7.384524 TCAATCCTCTTCATATCCTTCATGT 57.615 36.000 0.00 0.00 0.00 3.21
734 779 7.448420 TCAATCCTCTTCATATCCTTCATGTC 58.552 38.462 0.00 0.00 0.00 3.06
735 780 5.815233 TCCTCTTCATATCCTTCATGTCC 57.185 43.478 0.00 0.00 0.00 4.02
736 781 5.471424 TCCTCTTCATATCCTTCATGTCCT 58.529 41.667 0.00 0.00 0.00 3.85
737 782 5.907662 TCCTCTTCATATCCTTCATGTCCTT 59.092 40.000 0.00 0.00 0.00 3.36
739 784 7.059156 CCTCTTCATATCCTTCATGTCCTTTT 58.941 38.462 0.00 0.00 0.00 2.27
740 785 7.228308 CCTCTTCATATCCTTCATGTCCTTTTC 59.772 40.741 0.00 0.00 0.00 2.29
741 786 7.632861 TCTTCATATCCTTCATGTCCTTTTCA 58.367 34.615 0.00 0.00 0.00 2.69
742 787 8.277197 TCTTCATATCCTTCATGTCCTTTTCAT 58.723 33.333 0.00 0.00 0.00 2.57
743 788 7.812690 TCATATCCTTCATGTCCTTTTCATG 57.187 36.000 0.00 0.00 42.53 3.07
745 790 7.500227 TCATATCCTTCATGTCCTTTTCATGTC 59.500 37.037 5.94 0.00 42.03 3.06
746 791 4.335416 TCCTTCATGTCCTTTTCATGTCC 58.665 43.478 5.94 0.00 42.03 4.02
747 792 3.127548 CCTTCATGTCCTTTTCATGTCCG 59.872 47.826 5.94 0.00 42.03 4.79
756 801 0.690192 TTTCATGTCCGGCCTCTTCA 59.310 50.000 0.00 0.00 0.00 3.02
762 807 0.250513 GTCCGGCCTCTTCATTCAGT 59.749 55.000 0.00 0.00 0.00 3.41
763 808 0.537188 TCCGGCCTCTTCATTCAGTC 59.463 55.000 0.00 0.00 0.00 3.51
858 903 0.389948 AGCTCACGGTCGAATTCACC 60.390 55.000 6.22 10.92 0.00 4.02
904 949 2.012414 CGAGCGGACGACAAACGAA 61.012 57.895 0.00 0.00 45.77 3.85
915 960 2.471749 CGACAAACGAACGGCTCATAAC 60.472 50.000 0.00 0.00 45.77 1.89
955 1000 7.095816 GGTGCAACAAAATAAACCACTTATCAC 60.096 37.037 0.00 0.00 39.98 3.06
1297 1362 4.473520 AATGCTCCCCCGACGCTG 62.474 66.667 0.00 0.00 0.00 5.18
1311 1376 2.357517 GCTGTCCGTCCAGGTGTG 60.358 66.667 1.37 0.00 41.99 3.82
1323 1388 0.663568 CAGGTGTGAGGTTCGTCGTC 60.664 60.000 0.00 0.00 0.00 4.20
1327 1392 2.050714 TGAGGTTCGTCGTCGCAC 60.051 61.111 0.00 0.00 36.96 5.34
1396 1461 1.079819 CATGACACCGAGGCGTTCT 60.080 57.895 0.00 0.00 0.00 3.01
1735 1800 2.279851 CCACGGTGAACACGCTCA 60.280 61.111 10.28 0.00 34.00 4.26
1797 1862 1.304052 CACCGCCTCCCAAATCCAA 60.304 57.895 0.00 0.00 0.00 3.53
1800 1865 0.106519 CCGCCTCCCAAATCCAATCT 60.107 55.000 0.00 0.00 0.00 2.40
1864 2409 1.070786 GAGCCTCCAACCACGTTCA 59.929 57.895 0.00 0.00 0.00 3.18
1935 2492 2.423898 CCACGGGGCTACTGACGAT 61.424 63.158 0.00 0.00 0.00 3.73
2394 2957 2.665000 CTTCGAGGCCAGCTTCCA 59.335 61.111 5.01 0.00 0.00 3.53
2395 2958 1.222936 CTTCGAGGCCAGCTTCCAT 59.777 57.895 5.01 0.00 0.00 3.41
2396 2959 0.813210 CTTCGAGGCCAGCTTCCATC 60.813 60.000 5.01 0.00 0.00 3.51
2397 2960 2.578163 TTCGAGGCCAGCTTCCATCG 62.578 60.000 5.01 10.23 0.00 3.84
2398 2961 2.899339 GAGGCCAGCTTCCATCGC 60.899 66.667 5.01 0.00 0.00 4.58
2399 2962 3.687321 GAGGCCAGCTTCCATCGCA 62.687 63.158 5.01 0.00 0.00 5.10
2400 2963 2.517875 GGCCAGCTTCCATCGCAT 60.518 61.111 0.00 0.00 0.00 4.73
2401 2964 1.227943 GGCCAGCTTCCATCGCATA 60.228 57.895 0.00 0.00 0.00 3.14
2402 2965 0.819259 GGCCAGCTTCCATCGCATAA 60.819 55.000 0.00 0.00 0.00 1.90
2403 2966 0.590195 GCCAGCTTCCATCGCATAAG 59.410 55.000 0.00 0.00 0.00 1.73
2404 2967 1.811558 GCCAGCTTCCATCGCATAAGA 60.812 52.381 0.00 0.00 0.00 2.10
2405 2968 2.141517 CCAGCTTCCATCGCATAAGAG 58.858 52.381 0.00 0.00 0.00 2.85
2406 2969 1.530293 CAGCTTCCATCGCATAAGAGC 59.470 52.381 0.00 0.00 0.00 4.09
2407 2970 0.871057 GCTTCCATCGCATAAGAGCC 59.129 55.000 0.00 0.00 0.00 4.70
2408 2971 1.542108 GCTTCCATCGCATAAGAGCCT 60.542 52.381 0.00 0.00 0.00 4.58
2409 2972 2.411904 CTTCCATCGCATAAGAGCCTC 58.588 52.381 0.00 0.00 0.00 4.70
2410 2973 1.413118 TCCATCGCATAAGAGCCTCA 58.587 50.000 0.00 0.00 0.00 3.86
2411 2974 1.069204 TCCATCGCATAAGAGCCTCAC 59.931 52.381 0.00 0.00 0.00 3.51
2412 2975 1.135046 CATCGCATAAGAGCCTCACG 58.865 55.000 0.00 0.00 0.00 4.35
2413 2976 0.747255 ATCGCATAAGAGCCTCACGT 59.253 50.000 0.00 0.00 0.00 4.49
2414 2977 0.179137 TCGCATAAGAGCCTCACGTG 60.179 55.000 9.94 9.94 0.00 4.49
2415 2978 0.458543 CGCATAAGAGCCTCACGTGT 60.459 55.000 16.51 0.00 0.00 4.49
2416 2979 1.202256 CGCATAAGAGCCTCACGTGTA 60.202 52.381 16.51 1.31 0.00 2.90
2417 2980 2.734175 CGCATAAGAGCCTCACGTGTAA 60.734 50.000 16.51 0.00 0.00 2.41
2418 2981 3.458189 GCATAAGAGCCTCACGTGTAAT 58.542 45.455 16.51 0.00 0.00 1.89
2419 2982 3.871594 GCATAAGAGCCTCACGTGTAATT 59.128 43.478 16.51 6.02 0.00 1.40
2420 2983 4.260375 GCATAAGAGCCTCACGTGTAATTG 60.260 45.833 16.51 2.04 0.00 2.32
2421 2984 2.386661 AGAGCCTCACGTGTAATTGG 57.613 50.000 16.51 11.77 0.00 3.16
2422 2985 1.623811 AGAGCCTCACGTGTAATTGGT 59.376 47.619 16.51 6.23 0.00 3.67
2423 2986 1.732259 GAGCCTCACGTGTAATTGGTG 59.268 52.381 16.51 0.00 0.00 4.17
2424 2987 0.802494 GCCTCACGTGTAATTGGTGG 59.198 55.000 16.51 7.22 32.65 4.61
2425 2988 1.880646 GCCTCACGTGTAATTGGTGGT 60.881 52.381 16.51 0.00 32.65 4.16
2426 2989 1.804151 CCTCACGTGTAATTGGTGGTG 59.196 52.381 16.51 0.00 32.65 4.17
2427 2990 2.549134 CCTCACGTGTAATTGGTGGTGA 60.549 50.000 16.51 0.00 33.77 4.02
2428 2991 2.736721 CTCACGTGTAATTGGTGGTGAG 59.263 50.000 16.51 13.47 43.46 3.51
2429 2992 2.103432 TCACGTGTAATTGGTGGTGAGT 59.897 45.455 16.51 0.00 31.45 3.41
2430 2993 2.223144 CACGTGTAATTGGTGGTGAGTG 59.777 50.000 7.58 0.00 0.00 3.51
2431 2994 1.804151 CGTGTAATTGGTGGTGAGTGG 59.196 52.381 0.00 0.00 0.00 4.00
2432 2995 2.549134 CGTGTAATTGGTGGTGAGTGGA 60.549 50.000 0.00 0.00 0.00 4.02
2433 2996 3.686016 GTGTAATTGGTGGTGAGTGGAT 58.314 45.455 0.00 0.00 0.00 3.41
2434 2997 4.621983 CGTGTAATTGGTGGTGAGTGGATA 60.622 45.833 0.00 0.00 0.00 2.59
2435 2998 5.437060 GTGTAATTGGTGGTGAGTGGATAT 58.563 41.667 0.00 0.00 0.00 1.63
2436 2999 5.296780 GTGTAATTGGTGGTGAGTGGATATG 59.703 44.000 0.00 0.00 0.00 1.78
2437 3000 4.860802 AATTGGTGGTGAGTGGATATGA 57.139 40.909 0.00 0.00 0.00 2.15
2438 3001 5.393068 AATTGGTGGTGAGTGGATATGAT 57.607 39.130 0.00 0.00 0.00 2.45
2439 3002 4.422073 TTGGTGGTGAGTGGATATGATC 57.578 45.455 0.00 0.00 0.00 2.92
2440 3003 3.383223 TGGTGGTGAGTGGATATGATCA 58.617 45.455 0.00 0.00 0.00 2.92
2441 3004 3.975982 TGGTGGTGAGTGGATATGATCAT 59.024 43.478 13.81 13.81 0.00 2.45
2442 3005 5.154418 TGGTGGTGAGTGGATATGATCATA 58.846 41.667 17.56 17.56 0.00 2.15
2443 3006 5.012046 TGGTGGTGAGTGGATATGATCATAC 59.988 44.000 17.60 7.84 0.00 2.39
2444 3007 5.164233 GTGGTGAGTGGATATGATCATACG 58.836 45.833 17.60 0.00 0.00 3.06
2445 3008 5.048013 GTGGTGAGTGGATATGATCATACGA 60.048 44.000 17.60 6.72 0.00 3.43
2446 3009 5.716703 TGGTGAGTGGATATGATCATACGAT 59.283 40.000 17.60 3.26 33.31 3.73
2462 3025 9.653067 GATCATACGATCTAAATCCGTATGTAG 57.347 37.037 24.04 8.16 44.10 2.74
2463 3026 8.557592 TCATACGATCTAAATCCGTATGTAGT 57.442 34.615 24.04 0.00 42.35 2.73
2464 3027 9.006839 TCATACGATCTAAATCCGTATGTAGTT 57.993 33.333 24.04 0.00 42.35 2.24
2465 3028 9.622004 CATACGATCTAAATCCGTATGTAGTTT 57.378 33.333 19.69 0.00 40.19 2.66
2466 3029 7.925703 ACGATCTAAATCCGTATGTAGTTTG 57.074 36.000 0.00 0.00 0.00 2.93
2467 3030 6.921857 ACGATCTAAATCCGTATGTAGTTTGG 59.078 38.462 0.00 0.00 0.00 3.28
2468 3031 6.921857 CGATCTAAATCCGTATGTAGTTTGGT 59.078 38.462 0.00 0.00 0.00 3.67
2469 3032 7.437267 CGATCTAAATCCGTATGTAGTTTGGTT 59.563 37.037 0.00 0.00 0.00 3.67
2470 3033 9.754382 GATCTAAATCCGTATGTAGTTTGGTTA 57.246 33.333 0.00 0.00 0.00 2.85
2472 3035 9.537192 TCTAAATCCGTATGTAGTTTGGTTATG 57.463 33.333 0.00 0.00 0.00 1.90
2473 3036 9.321562 CTAAATCCGTATGTAGTTTGGTTATGT 57.678 33.333 0.00 0.00 0.00 2.29
2474 3037 7.781548 AATCCGTATGTAGTTTGGTTATGTC 57.218 36.000 0.00 0.00 0.00 3.06
2475 3038 6.534475 TCCGTATGTAGTTTGGTTATGTCT 57.466 37.500 0.00 0.00 0.00 3.41
2476 3039 7.643569 TCCGTATGTAGTTTGGTTATGTCTA 57.356 36.000 0.00 0.00 0.00 2.59
2477 3040 8.065473 TCCGTATGTAGTTTGGTTATGTCTAA 57.935 34.615 0.00 0.00 0.00 2.10
2478 3041 8.698210 TCCGTATGTAGTTTGGTTATGTCTAAT 58.302 33.333 0.00 0.00 0.00 1.73
2479 3042 8.761497 CCGTATGTAGTTTGGTTATGTCTAATG 58.239 37.037 0.00 0.00 0.00 1.90
2480 3043 9.524106 CGTATGTAGTTTGGTTATGTCTAATGA 57.476 33.333 0.00 0.00 0.00 2.57
2483 3046 8.246908 TGTAGTTTGGTTATGTCTAATGAACG 57.753 34.615 0.00 0.00 0.00 3.95
2484 3047 8.089597 TGTAGTTTGGTTATGTCTAATGAACGA 58.910 33.333 0.00 0.00 0.00 3.85
2485 3048 7.596749 AGTTTGGTTATGTCTAATGAACGAG 57.403 36.000 0.00 0.00 0.00 4.18
2486 3049 7.383687 AGTTTGGTTATGTCTAATGAACGAGA 58.616 34.615 0.00 0.00 0.00 4.04
2487 3050 7.545965 AGTTTGGTTATGTCTAATGAACGAGAG 59.454 37.037 0.00 0.00 0.00 3.20
2488 3051 5.902681 TGGTTATGTCTAATGAACGAGAGG 58.097 41.667 0.00 0.00 0.00 3.69
2489 3052 5.163447 TGGTTATGTCTAATGAACGAGAGGG 60.163 44.000 0.00 0.00 0.00 4.30
2490 3053 2.961526 TGTCTAATGAACGAGAGGGC 57.038 50.000 0.00 0.00 0.00 5.19
2491 3054 2.457598 TGTCTAATGAACGAGAGGGCT 58.542 47.619 0.00 0.00 0.00 5.19
2492 3055 3.628008 TGTCTAATGAACGAGAGGGCTA 58.372 45.455 0.00 0.00 0.00 3.93
2493 3056 3.380637 TGTCTAATGAACGAGAGGGCTAC 59.619 47.826 0.00 0.00 0.00 3.58
2494 3057 2.617308 TCTAATGAACGAGAGGGCTACG 59.383 50.000 0.00 0.00 0.00 3.51
2495 3058 1.183549 AATGAACGAGAGGGCTACGT 58.816 50.000 0.00 0.00 41.97 3.57
2496 3059 0.456221 ATGAACGAGAGGGCTACGTG 59.544 55.000 0.00 0.00 40.10 4.49
2497 3060 0.892358 TGAACGAGAGGGCTACGTGT 60.892 55.000 0.00 0.00 40.10 4.49
2498 3061 0.179169 GAACGAGAGGGCTACGTGTC 60.179 60.000 0.00 0.00 40.10 3.67
2499 3062 0.892358 AACGAGAGGGCTACGTGTCA 60.892 55.000 0.00 0.00 40.10 3.58
2500 3063 1.306642 ACGAGAGGGCTACGTGTCAG 61.307 60.000 0.00 0.00 38.79 3.51
2501 3064 1.139947 GAGAGGGCTACGTGTCAGC 59.860 63.158 0.00 0.00 38.35 4.26
2506 3069 2.567049 GCTACGTGTCAGCCGACT 59.433 61.111 0.00 0.00 43.06 4.18
2507 3070 1.798735 GCTACGTGTCAGCCGACTA 59.201 57.895 0.00 0.00 43.06 2.59
2508 3071 0.522915 GCTACGTGTCAGCCGACTAC 60.523 60.000 0.00 0.00 43.06 2.73
2509 3072 0.247576 CTACGTGTCAGCCGACTACG 60.248 60.000 17.61 17.61 44.72 3.51
2510 3073 0.670239 TACGTGTCAGCCGACTACGA 60.670 55.000 22.83 10.33 43.33 3.43
2511 3074 1.226046 CGTGTCAGCCGACTACGAG 60.226 63.158 15.46 0.00 43.33 4.18
2512 3075 1.136984 GTGTCAGCCGACTACGAGG 59.863 63.158 1.05 0.00 43.06 4.63
2521 3084 2.404215 CCGACTACGAGGCAATTATGG 58.596 52.381 0.00 0.00 42.66 2.74
2522 3085 2.223971 CCGACTACGAGGCAATTATGGT 60.224 50.000 0.00 0.00 42.66 3.55
2523 3086 2.794910 CGACTACGAGGCAATTATGGTG 59.205 50.000 0.00 0.00 42.66 4.17
2524 3087 3.490249 CGACTACGAGGCAATTATGGTGA 60.490 47.826 0.00 0.00 42.66 4.02
2525 3088 3.793559 ACTACGAGGCAATTATGGTGAC 58.206 45.455 0.00 0.00 0.00 3.67
2526 3089 3.451178 ACTACGAGGCAATTATGGTGACT 59.549 43.478 0.00 0.00 36.92 3.41
2527 3090 3.350219 ACGAGGCAATTATGGTGACTT 57.650 42.857 0.00 0.00 33.24 3.01
2528 3091 3.686016 ACGAGGCAATTATGGTGACTTT 58.314 40.909 0.00 0.00 33.24 2.66
2529 3092 4.839121 ACGAGGCAATTATGGTGACTTTA 58.161 39.130 0.00 0.00 33.24 1.85
2530 3093 5.437060 ACGAGGCAATTATGGTGACTTTAT 58.563 37.500 0.00 0.00 33.24 1.40
2531 3094 6.588204 ACGAGGCAATTATGGTGACTTTATA 58.412 36.000 0.00 0.00 33.24 0.98
2532 3095 7.051623 ACGAGGCAATTATGGTGACTTTATAA 58.948 34.615 0.00 0.00 33.24 0.98
2533 3096 7.554835 ACGAGGCAATTATGGTGACTTTATAAA 59.445 33.333 0.00 0.00 33.24 1.40
2534 3097 8.402472 CGAGGCAATTATGGTGACTTTATAAAA 58.598 33.333 0.00 0.00 33.24 1.52
2545 3108 8.736244 TGGTGACTTTATAAAATCTTAAGGTGC 58.264 33.333 8.05 0.00 0.00 5.01
2546 3109 8.957466 GGTGACTTTATAAAATCTTAAGGTGCT 58.043 33.333 8.05 0.00 0.00 4.40
2552 3115 8.842358 TTATAAAATCTTAAGGTGCTATCCCG 57.158 34.615 1.85 0.00 0.00 5.14
2553 3116 3.771577 AATCTTAAGGTGCTATCCCGG 57.228 47.619 1.85 0.00 0.00 5.73
2554 3117 0.756903 TCTTAAGGTGCTATCCCGGC 59.243 55.000 1.85 0.00 0.00 6.13
2555 3118 0.759346 CTTAAGGTGCTATCCCGGCT 59.241 55.000 0.00 0.00 0.00 5.52
2556 3119 1.141053 CTTAAGGTGCTATCCCGGCTT 59.859 52.381 0.00 0.00 0.00 4.35
2557 3120 2.091098 TAAGGTGCTATCCCGGCTTA 57.909 50.000 0.00 0.00 0.00 3.09
2558 3121 1.209621 AAGGTGCTATCCCGGCTTAA 58.790 50.000 0.00 0.00 0.00 1.85
2559 3122 1.435256 AGGTGCTATCCCGGCTTAAT 58.565 50.000 0.00 0.00 0.00 1.40
2560 3123 1.348036 AGGTGCTATCCCGGCTTAATC 59.652 52.381 0.00 0.00 0.00 1.75
2561 3124 1.348036 GGTGCTATCCCGGCTTAATCT 59.652 52.381 0.00 0.00 0.00 2.40
2562 3125 2.613223 GGTGCTATCCCGGCTTAATCTC 60.613 54.545 0.00 0.00 0.00 2.75
2563 3126 2.300437 GTGCTATCCCGGCTTAATCTCT 59.700 50.000 0.00 0.00 0.00 3.10
2564 3127 2.563179 TGCTATCCCGGCTTAATCTCTC 59.437 50.000 0.00 0.00 0.00 3.20
2565 3128 2.416162 GCTATCCCGGCTTAATCTCTCG 60.416 54.545 0.00 0.00 0.00 4.04
2566 3129 0.969894 ATCCCGGCTTAATCTCTCGG 59.030 55.000 0.00 0.00 40.32 4.63
2567 3130 0.106369 TCCCGGCTTAATCTCTCGGA 60.106 55.000 0.00 0.00 42.94 4.55
2568 3131 0.750850 CCCGGCTTAATCTCTCGGAA 59.249 55.000 0.00 0.00 42.94 4.30
2569 3132 1.138266 CCCGGCTTAATCTCTCGGAAA 59.862 52.381 0.00 0.00 42.94 3.13
2570 3133 2.224305 CCCGGCTTAATCTCTCGGAAAT 60.224 50.000 0.00 0.00 42.94 2.17
2571 3134 2.802816 CCGGCTTAATCTCTCGGAAATG 59.197 50.000 0.00 0.00 42.94 2.32
2572 3135 2.221981 CGGCTTAATCTCTCGGAAATGC 59.778 50.000 0.00 0.00 0.00 3.56
2573 3136 3.471680 GGCTTAATCTCTCGGAAATGCT 58.528 45.455 0.00 0.00 0.00 3.79
2574 3137 3.496507 GGCTTAATCTCTCGGAAATGCTC 59.503 47.826 0.00 0.00 0.00 4.26
2575 3138 4.122776 GCTTAATCTCTCGGAAATGCTCA 58.877 43.478 0.00 0.00 0.00 4.26
2576 3139 4.210955 GCTTAATCTCTCGGAAATGCTCAG 59.789 45.833 0.00 0.00 0.00 3.35
2577 3140 5.595885 CTTAATCTCTCGGAAATGCTCAGA 58.404 41.667 0.00 0.00 0.00 3.27
2578 3141 3.731652 ATCTCTCGGAAATGCTCAGAG 57.268 47.619 0.00 0.00 45.01 3.35
2579 3142 1.753649 TCTCTCGGAAATGCTCAGAGG 59.246 52.381 0.00 0.00 44.11 3.69
2580 3143 0.826715 TCTCGGAAATGCTCAGAGGG 59.173 55.000 0.00 0.00 44.11 4.30
2581 3144 0.826715 CTCGGAAATGCTCAGAGGGA 59.173 55.000 0.00 0.00 41.28 4.20
2582 3145 1.415659 CTCGGAAATGCTCAGAGGGAT 59.584 52.381 0.00 0.00 41.28 3.85
2583 3146 2.630098 CTCGGAAATGCTCAGAGGGATA 59.370 50.000 0.00 0.00 41.28 2.59
2584 3147 2.630098 TCGGAAATGCTCAGAGGGATAG 59.370 50.000 0.00 0.00 0.00 2.08
2585 3148 2.630098 CGGAAATGCTCAGAGGGATAGA 59.370 50.000 0.00 0.00 0.00 1.98
2586 3149 3.305950 CGGAAATGCTCAGAGGGATAGAG 60.306 52.174 0.00 0.00 0.00 2.43
2587 3150 3.900601 GGAAATGCTCAGAGGGATAGAGA 59.099 47.826 0.00 0.00 0.00 3.10
2588 3151 4.021192 GGAAATGCTCAGAGGGATAGAGAG 60.021 50.000 0.00 0.00 0.00 3.20
2589 3152 3.901570 ATGCTCAGAGGGATAGAGAGT 57.098 47.619 0.00 0.00 0.00 3.24
2590 3153 2.942804 TGCTCAGAGGGATAGAGAGTG 58.057 52.381 0.00 0.00 0.00 3.51
2591 3154 2.243478 TGCTCAGAGGGATAGAGAGTGT 59.757 50.000 0.00 0.00 0.00 3.55
2592 3155 2.622942 GCTCAGAGGGATAGAGAGTGTG 59.377 54.545 0.00 0.00 0.00 3.82
2593 3156 3.897239 CTCAGAGGGATAGAGAGTGTGT 58.103 50.000 0.00 0.00 0.00 3.72
2594 3157 3.625853 TCAGAGGGATAGAGAGTGTGTG 58.374 50.000 0.00 0.00 0.00 3.82
2595 3158 2.100584 CAGAGGGATAGAGAGTGTGTGC 59.899 54.545 0.00 0.00 0.00 4.57
2596 3159 2.024464 AGAGGGATAGAGAGTGTGTGCT 60.024 50.000 0.00 0.00 0.00 4.40
2597 3160 2.763448 GAGGGATAGAGAGTGTGTGCTT 59.237 50.000 0.00 0.00 0.00 3.91
2598 3161 2.499289 AGGGATAGAGAGTGTGTGCTTG 59.501 50.000 0.00 0.00 0.00 4.01
2599 3162 2.275318 GGATAGAGAGTGTGTGCTTGC 58.725 52.381 0.00 0.00 0.00 4.01
2600 3163 1.923204 GATAGAGAGTGTGTGCTTGCG 59.077 52.381 0.00 0.00 0.00 4.85
2601 3164 0.673985 TAGAGAGTGTGTGCTTGCGT 59.326 50.000 0.00 0.00 0.00 5.24
2602 3165 0.179073 AGAGAGTGTGTGCTTGCGTT 60.179 50.000 0.00 0.00 0.00 4.84
2603 3166 0.233332 GAGAGTGTGTGCTTGCGTTC 59.767 55.000 0.00 0.00 0.00 3.95
2604 3167 0.461870 AGAGTGTGTGCTTGCGTTCA 60.462 50.000 0.00 0.00 0.00 3.18
2605 3168 0.588252 GAGTGTGTGCTTGCGTTCAT 59.412 50.000 0.00 0.00 0.00 2.57
2606 3169 1.798223 GAGTGTGTGCTTGCGTTCATA 59.202 47.619 0.00 0.00 0.00 2.15
2607 3170 2.416547 GAGTGTGTGCTTGCGTTCATAT 59.583 45.455 0.00 0.00 0.00 1.78
2608 3171 2.160219 AGTGTGTGCTTGCGTTCATATG 59.840 45.455 0.00 0.00 0.00 1.78
2609 3172 2.159430 GTGTGTGCTTGCGTTCATATGA 59.841 45.455 0.00 0.00 0.00 2.15
2610 3173 3.009026 TGTGTGCTTGCGTTCATATGAT 58.991 40.909 6.17 0.00 0.00 2.45
2611 3174 3.439825 TGTGTGCTTGCGTTCATATGATT 59.560 39.130 6.17 0.00 0.00 2.57
2612 3175 3.787634 GTGTGCTTGCGTTCATATGATTG 59.212 43.478 6.17 3.34 0.00 2.67
2613 3176 3.688673 TGTGCTTGCGTTCATATGATTGA 59.311 39.130 6.17 0.00 0.00 2.57
2614 3177 4.201841 TGTGCTTGCGTTCATATGATTGAG 60.202 41.667 6.17 2.54 0.00 3.02
2615 3178 3.940852 TGCTTGCGTTCATATGATTGAGT 59.059 39.130 6.17 0.00 0.00 3.41
2616 3179 4.201841 TGCTTGCGTTCATATGATTGAGTG 60.202 41.667 6.17 0.00 0.00 3.51
2617 3180 4.201851 GCTTGCGTTCATATGATTGAGTGT 60.202 41.667 6.17 0.00 0.00 3.55
2618 3181 5.006649 GCTTGCGTTCATATGATTGAGTGTA 59.993 40.000 6.17 0.00 0.00 2.90
2619 3182 6.293081 GCTTGCGTTCATATGATTGAGTGTAT 60.293 38.462 6.17 0.00 0.00 2.29
2620 3183 7.095649 GCTTGCGTTCATATGATTGAGTGTATA 60.096 37.037 6.17 0.00 0.00 1.47
2621 3184 7.637709 TGCGTTCATATGATTGAGTGTATAC 57.362 36.000 6.17 0.00 0.00 1.47
2622 3185 7.433680 TGCGTTCATATGATTGAGTGTATACT 58.566 34.615 6.17 0.00 40.66 2.12
2623 3186 7.926018 TGCGTTCATATGATTGAGTGTATACTT 59.074 33.333 6.17 0.00 37.25 2.24
2624 3187 8.217115 GCGTTCATATGATTGAGTGTATACTTG 58.783 37.037 6.17 0.00 37.25 3.16
2625 3188 9.249457 CGTTCATATGATTGAGTGTATACTTGT 57.751 33.333 6.17 0.00 37.25 3.16
2632 3195 8.702163 TGATTGAGTGTATACTTGTGTATGTG 57.298 34.615 4.17 0.00 39.49 3.21
2633 3196 8.527810 TGATTGAGTGTATACTTGTGTATGTGA 58.472 33.333 4.17 0.00 39.49 3.58
2634 3197 8.932945 ATTGAGTGTATACTTGTGTATGTGAG 57.067 34.615 4.17 0.00 39.49 3.51
2635 3198 6.330278 TGAGTGTATACTTGTGTATGTGAGC 58.670 40.000 4.17 0.00 39.49 4.26
2636 3199 6.071616 TGAGTGTATACTTGTGTATGTGAGCA 60.072 38.462 4.17 0.00 39.49 4.26
2637 3200 6.697395 AGTGTATACTTGTGTATGTGAGCAA 58.303 36.000 4.17 0.00 39.49 3.91
2638 3201 6.590292 AGTGTATACTTGTGTATGTGAGCAAC 59.410 38.462 4.17 0.00 39.49 4.17
2639 3202 6.590292 GTGTATACTTGTGTATGTGAGCAACT 59.410 38.462 4.17 0.00 39.49 3.16
2640 3203 7.117812 GTGTATACTTGTGTATGTGAGCAACTT 59.882 37.037 4.17 0.00 39.49 2.66
2641 3204 6.727824 ATACTTGTGTATGTGAGCAACTTC 57.272 37.500 0.00 0.00 37.92 3.01
2642 3205 3.494626 ACTTGTGTATGTGAGCAACTTCG 59.505 43.478 0.00 0.00 0.00 3.79
2643 3206 3.378911 TGTGTATGTGAGCAACTTCGA 57.621 42.857 0.00 0.00 0.00 3.71
2644 3207 3.925379 TGTGTATGTGAGCAACTTCGAT 58.075 40.909 0.00 0.00 0.00 3.59
2645 3208 4.314961 TGTGTATGTGAGCAACTTCGATT 58.685 39.130 0.00 0.00 0.00 3.34
2646 3209 4.152223 TGTGTATGTGAGCAACTTCGATTG 59.848 41.667 0.00 0.00 0.00 2.67
2647 3210 4.152402 GTGTATGTGAGCAACTTCGATTGT 59.848 41.667 1.06 0.00 31.83 2.71
2648 3211 5.347635 GTGTATGTGAGCAACTTCGATTGTA 59.652 40.000 1.06 0.00 31.83 2.41
2649 3212 4.928661 ATGTGAGCAACTTCGATTGTAC 57.071 40.909 1.06 0.00 31.83 2.90
2650 3213 3.990092 TGTGAGCAACTTCGATTGTACT 58.010 40.909 1.06 0.00 31.83 2.73
2651 3214 3.740832 TGTGAGCAACTTCGATTGTACTG 59.259 43.478 1.06 0.00 31.83 2.74
2652 3215 3.741344 GTGAGCAACTTCGATTGTACTGT 59.259 43.478 1.06 0.00 31.83 3.55
2653 3216 4.921515 GTGAGCAACTTCGATTGTACTGTA 59.078 41.667 1.06 0.00 31.83 2.74
2654 3217 5.577164 GTGAGCAACTTCGATTGTACTGTAT 59.423 40.000 1.06 0.00 31.83 2.29
2655 3218 5.805486 TGAGCAACTTCGATTGTACTGTATC 59.195 40.000 1.06 0.00 31.83 2.24
2656 3219 5.967088 AGCAACTTCGATTGTACTGTATCT 58.033 37.500 1.06 0.00 31.83 1.98
2657 3220 6.398918 AGCAACTTCGATTGTACTGTATCTT 58.601 36.000 1.06 0.00 31.83 2.40
2658 3221 6.874134 AGCAACTTCGATTGTACTGTATCTTT 59.126 34.615 1.06 0.00 31.83 2.52
2659 3222 7.387948 AGCAACTTCGATTGTACTGTATCTTTT 59.612 33.333 1.06 0.00 31.83 2.27
2660 3223 8.015658 GCAACTTCGATTGTACTGTATCTTTTT 58.984 33.333 1.06 0.00 31.83 1.94
2689 3252 9.901172 AAAATACGTCTTGAATCCTTTATAGGT 57.099 29.630 0.00 0.00 42.60 3.08
2693 3256 6.929606 ACGTCTTGAATCCTTTATAGGTATGC 59.070 38.462 0.00 0.00 42.60 3.14
2694 3257 6.369065 CGTCTTGAATCCTTTATAGGTATGCC 59.631 42.308 0.00 0.00 42.60 4.40
2695 3258 7.224297 GTCTTGAATCCTTTATAGGTATGCCA 58.776 38.462 1.54 0.00 42.60 4.92
2696 3259 7.885399 GTCTTGAATCCTTTATAGGTATGCCAT 59.115 37.037 1.54 0.00 42.60 4.40
2697 3260 8.448008 TCTTGAATCCTTTATAGGTATGCCATT 58.552 33.333 1.54 0.00 42.60 3.16
2698 3261 9.082313 CTTGAATCCTTTATAGGTATGCCATTT 57.918 33.333 1.54 0.00 42.60 2.32
2699 3262 9.432982 TTGAATCCTTTATAGGTATGCCATTTT 57.567 29.630 1.54 0.00 42.60 1.82
2700 3263 9.077885 TGAATCCTTTATAGGTATGCCATTTTC 57.922 33.333 1.54 0.00 42.60 2.29
2701 3264 9.077885 GAATCCTTTATAGGTATGCCATTTTCA 57.922 33.333 1.54 0.00 42.60 2.69
2702 3265 8.641498 ATCCTTTATAGGTATGCCATTTTCAG 57.359 34.615 1.54 0.00 42.60 3.02
2703 3266 7.004086 TCCTTTATAGGTATGCCATTTTCAGG 58.996 38.462 1.54 0.31 42.60 3.86
2704 3267 6.777580 CCTTTATAGGTATGCCATTTTCAGGT 59.222 38.462 1.54 0.00 36.74 4.00
2705 3268 7.255590 CCTTTATAGGTATGCCATTTTCAGGTG 60.256 40.741 1.54 0.00 36.74 4.00
2706 3269 2.102578 AGGTATGCCATTTTCAGGTGC 58.897 47.619 1.54 0.00 37.19 5.01
2707 3270 1.136891 GGTATGCCATTTTCAGGTGCC 59.863 52.381 0.00 0.00 34.09 5.01
2708 3271 1.102154 TATGCCATTTTCAGGTGCCG 58.898 50.000 0.00 0.00 0.00 5.69
2709 3272 0.611618 ATGCCATTTTCAGGTGCCGA 60.612 50.000 0.00 0.00 0.00 5.54
2710 3273 1.243342 TGCCATTTTCAGGTGCCGAG 61.243 55.000 0.00 0.00 0.00 4.63
2711 3274 1.244019 GCCATTTTCAGGTGCCGAGT 61.244 55.000 0.00 0.00 0.00 4.18
2712 3275 1.247567 CCATTTTCAGGTGCCGAGTT 58.752 50.000 0.00 0.00 0.00 3.01
2713 3276 1.068333 CCATTTTCAGGTGCCGAGTTG 60.068 52.381 0.00 0.00 0.00 3.16
2714 3277 1.068333 CATTTTCAGGTGCCGAGTTGG 60.068 52.381 0.00 0.00 42.50 3.77
2715 3278 0.181587 TTTTCAGGTGCCGAGTTGGA 59.818 50.000 0.00 0.00 42.00 3.53
2716 3279 0.181587 TTTCAGGTGCCGAGTTGGAA 59.818 50.000 0.00 0.00 42.00 3.53
2717 3280 0.400213 TTCAGGTGCCGAGTTGGAAT 59.600 50.000 0.00 0.00 42.00 3.01
2718 3281 0.036388 TCAGGTGCCGAGTTGGAATC 60.036 55.000 0.00 0.00 42.00 2.52
2719 3282 0.036010 CAGGTGCCGAGTTGGAATCT 60.036 55.000 0.00 0.00 37.09 2.40
2720 3283 0.250513 AGGTGCCGAGTTGGAATCTC 59.749 55.000 0.00 0.00 24.70 2.75
2721 3284 0.036388 GGTGCCGAGTTGGAATCTCA 60.036 55.000 0.00 0.00 42.00 3.27
2722 3285 1.407437 GGTGCCGAGTTGGAATCTCAT 60.407 52.381 0.00 0.00 42.00 2.90
2723 3286 2.359900 GTGCCGAGTTGGAATCTCATT 58.640 47.619 0.00 0.00 42.00 2.57
2724 3287 2.352960 GTGCCGAGTTGGAATCTCATTC 59.647 50.000 0.00 0.00 42.00 2.67
2725 3288 2.237143 TGCCGAGTTGGAATCTCATTCT 59.763 45.455 0.00 0.00 42.00 2.40
2726 3289 3.450817 TGCCGAGTTGGAATCTCATTCTA 59.549 43.478 0.00 0.00 42.00 2.10
2727 3290 4.054671 GCCGAGTTGGAATCTCATTCTAG 58.945 47.826 0.00 0.00 42.00 2.43
2728 3291 4.202161 GCCGAGTTGGAATCTCATTCTAGA 60.202 45.833 0.00 0.00 42.00 2.43
2729 3292 5.527951 CCGAGTTGGAATCTCATTCTAGAG 58.472 45.833 0.00 0.00 42.00 2.43
2730 3293 5.300539 CCGAGTTGGAATCTCATTCTAGAGA 59.699 44.000 0.00 0.00 44.25 3.10
2731 3294 6.205784 CGAGTTGGAATCTCATTCTAGAGAC 58.794 44.000 0.00 0.00 46.58 3.36
2732 3295 6.183360 CGAGTTGGAATCTCATTCTAGAGACA 60.183 42.308 0.00 0.00 46.58 3.41
2733 3296 6.872920 AGTTGGAATCTCATTCTAGAGACAC 58.127 40.000 0.00 0.00 46.58 3.67
2734 3297 5.506686 TGGAATCTCATTCTAGAGACACG 57.493 43.478 0.00 0.00 46.58 4.49
2735 3298 4.950475 TGGAATCTCATTCTAGAGACACGT 59.050 41.667 0.00 0.00 46.58 4.49
2736 3299 5.419155 TGGAATCTCATTCTAGAGACACGTT 59.581 40.000 0.00 0.00 46.58 3.99
2737 3300 6.071334 TGGAATCTCATTCTAGAGACACGTTT 60.071 38.462 0.00 0.00 46.58 3.60
2738 3301 6.814146 GGAATCTCATTCTAGAGACACGTTTT 59.186 38.462 0.00 0.00 46.58 2.43
2739 3302 7.201478 GGAATCTCATTCTAGAGACACGTTTTG 60.201 40.741 0.00 0.00 46.58 2.44
2740 3303 6.085555 TCTCATTCTAGAGACACGTTTTGT 57.914 37.500 0.00 0.00 39.62 2.83
2751 3314 4.985538 ACACGTTTTGTCAATTGGGTAA 57.014 36.364 5.42 0.00 29.79 2.85
2752 3315 4.927422 ACACGTTTTGTCAATTGGGTAAG 58.073 39.130 5.42 0.00 29.79 2.34
2753 3316 4.641094 ACACGTTTTGTCAATTGGGTAAGA 59.359 37.500 5.42 0.00 29.79 2.10
2754 3317 4.973663 CACGTTTTGTCAATTGGGTAAGAC 59.026 41.667 5.42 3.77 0.00 3.01
2755 3318 4.215965 CGTTTTGTCAATTGGGTAAGACG 58.784 43.478 5.42 11.10 33.83 4.18
2756 3319 4.024725 CGTTTTGTCAATTGGGTAAGACGA 60.025 41.667 18.83 3.94 32.69 4.20
2757 3320 5.449304 GTTTTGTCAATTGGGTAAGACGAG 58.551 41.667 5.42 0.00 33.83 4.18
2758 3321 4.610605 TTGTCAATTGGGTAAGACGAGA 57.389 40.909 5.42 0.00 33.83 4.04
2759 3322 4.819105 TGTCAATTGGGTAAGACGAGAT 57.181 40.909 5.42 0.00 33.83 2.75
2760 3323 4.755411 TGTCAATTGGGTAAGACGAGATC 58.245 43.478 5.42 0.00 33.83 2.75
2761 3324 4.120589 GTCAATTGGGTAAGACGAGATCC 58.879 47.826 5.42 0.00 0.00 3.36
2762 3325 4.030913 TCAATTGGGTAAGACGAGATCCT 58.969 43.478 5.42 0.00 0.00 3.24
2763 3326 5.068723 GTCAATTGGGTAAGACGAGATCCTA 59.931 44.000 5.42 0.00 0.00 2.94
2764 3327 5.068723 TCAATTGGGTAAGACGAGATCCTAC 59.931 44.000 5.42 0.00 0.00 3.18
2765 3328 3.657398 TGGGTAAGACGAGATCCTACA 57.343 47.619 0.00 0.00 0.00 2.74
2766 3329 3.552875 TGGGTAAGACGAGATCCTACAG 58.447 50.000 0.00 0.00 0.00 2.74
2767 3330 3.053842 TGGGTAAGACGAGATCCTACAGT 60.054 47.826 0.00 0.00 0.00 3.55
2768 3331 3.952967 GGGTAAGACGAGATCCTACAGTT 59.047 47.826 0.00 0.00 0.00 3.16
2769 3332 4.036616 GGGTAAGACGAGATCCTACAGTTC 59.963 50.000 0.00 0.00 0.00 3.01
2770 3333 4.639310 GGTAAGACGAGATCCTACAGTTCA 59.361 45.833 0.00 0.00 0.00 3.18
2771 3334 4.705337 AAGACGAGATCCTACAGTTCAC 57.295 45.455 0.00 0.00 0.00 3.18
2772 3335 3.958018 AGACGAGATCCTACAGTTCACT 58.042 45.455 0.00 0.00 0.00 3.41
2797 3360 2.191128 ATCTTTGAGGCTTGCTTCGT 57.809 45.000 0.00 0.00 0.00 3.85
2830 3394 7.367459 CCCTAACTCAATTTCCTAGGGGTATTT 60.367 40.741 9.46 0.00 43.55 1.40
3015 3580 0.532862 GGCCGATCCATCAATCACGT 60.533 55.000 0.00 0.00 34.01 4.49
3106 3671 2.665185 GGCGGCGGCGATCTTATT 60.665 61.111 36.87 0.00 41.24 1.40
3169 3734 4.135153 CCAGCGCTCGCAGGTACT 62.135 66.667 7.13 0.00 41.96 2.73
3200 3765 1.300620 CCCACGTTTGTCTCGCTCA 60.301 57.895 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.739498 ATTTACTAAGATGGTCGTGTGTTTT 57.261 32.000 0.00 0.00 0.00 2.43
38 39 6.961359 TCAATTTACTAAGATGGTCGTGTG 57.039 37.500 0.00 0.00 0.00 3.82
39 40 7.159372 AGTTCAATTTACTAAGATGGTCGTGT 58.841 34.615 0.00 0.00 0.00 4.49
73 76 0.603975 GAGCCCCGGCACTGAATATC 60.604 60.000 8.74 0.00 44.88 1.63
86 89 1.228184 CTGGATGCAGATGAGCCCC 60.228 63.158 8.85 0.00 0.00 5.80
159 162 2.256174 CTGGCGCACTGAATCATTTTG 58.744 47.619 10.83 0.00 0.00 2.44
177 180 1.850377 TGAAATTTTGCACGCACCTG 58.150 45.000 0.00 0.00 0.00 4.00
184 187 6.147492 TGTCATTTAGCCATGAAATTTTGCAC 59.853 34.615 0.00 0.00 34.89 4.57
211 214 0.976641 TTTGGTCACGAGCTCCTCAT 59.023 50.000 8.47 0.00 0.00 2.90
212 215 0.756294 TTTTGGTCACGAGCTCCTCA 59.244 50.000 8.47 0.00 0.00 3.86
228 231 4.964593 AGCACTGCTCATTTTGGATTTTT 58.035 34.783 0.00 0.00 30.62 1.94
233 236 5.243507 TGAAAATAGCACTGCTCATTTTGGA 59.756 36.000 22.44 13.34 40.44 3.53
297 300 2.004583 TTGGACATTTCGGTAGCTCG 57.995 50.000 0.00 0.00 0.00 5.03
305 308 1.879380 TCCAGCAGTTTGGACATTTCG 59.121 47.619 0.00 0.00 42.24 3.46
320 323 0.388520 GTCCGTGCCAAATTTCCAGC 60.389 55.000 0.00 0.00 0.00 4.85
392 409 7.701924 CCGCATGTGAACAGTAAAATCATTAAT 59.298 33.333 8.11 0.00 0.00 1.40
458 475 3.113322 GGAAAAACAACTCTTGAACCGC 58.887 45.455 0.00 0.00 0.00 5.68
480 497 2.435805 GCATATCCCTTGTCAGGACTCA 59.564 50.000 0.65 0.00 44.19 3.41
481 498 2.703007 AGCATATCCCTTGTCAGGACTC 59.297 50.000 0.65 0.00 44.19 3.36
482 499 2.769209 AGCATATCCCTTGTCAGGACT 58.231 47.619 0.65 0.00 44.19 3.85
483 500 3.471680 GAAGCATATCCCTTGTCAGGAC 58.528 50.000 0.00 0.00 44.19 3.85
484 501 2.439507 GGAAGCATATCCCTTGTCAGGA 59.560 50.000 0.00 0.00 44.19 3.86
485 502 2.441001 AGGAAGCATATCCCTTGTCAGG 59.559 50.000 0.09 0.00 40.59 3.86
486 503 3.118112 ACAGGAAGCATATCCCTTGTCAG 60.118 47.826 0.09 0.00 40.59 3.51
487 504 2.846206 ACAGGAAGCATATCCCTTGTCA 59.154 45.455 0.09 0.00 40.59 3.58
495 512 5.841957 ACAAAATGGACAGGAAGCATATC 57.158 39.130 0.00 0.00 0.00 1.63
610 627 5.038651 TGACGGGACTCCTTTTCTAAAAA 57.961 39.130 0.00 0.00 0.00 1.94
611 628 4.693042 TGACGGGACTCCTTTTCTAAAA 57.307 40.909 0.00 0.00 0.00 1.52
612 629 4.903045 ATGACGGGACTCCTTTTCTAAA 57.097 40.909 0.00 0.00 0.00 1.85
613 630 4.903045 AATGACGGGACTCCTTTTCTAA 57.097 40.909 0.00 0.00 0.00 2.10
614 631 4.903045 AAATGACGGGACTCCTTTTCTA 57.097 40.909 0.00 0.00 0.00 2.10
615 632 3.790089 AAATGACGGGACTCCTTTTCT 57.210 42.857 0.00 0.00 0.00 2.52
616 633 3.818773 TGAAAATGACGGGACTCCTTTTC 59.181 43.478 10.52 10.52 34.68 2.29
617 634 3.827722 TGAAAATGACGGGACTCCTTTT 58.172 40.909 0.00 0.00 0.00 2.27
618 635 3.502123 TGAAAATGACGGGACTCCTTT 57.498 42.857 0.00 0.00 0.00 3.11
619 636 3.721087 ATGAAAATGACGGGACTCCTT 57.279 42.857 0.00 0.00 0.00 3.36
620 637 4.202367 GGATATGAAAATGACGGGACTCCT 60.202 45.833 0.00 0.00 0.00 3.69
621 638 4.065789 GGATATGAAAATGACGGGACTCC 58.934 47.826 0.00 0.00 0.00 3.85
622 639 4.962155 AGGATATGAAAATGACGGGACTC 58.038 43.478 0.00 0.00 0.00 3.36
623 640 4.656112 AGAGGATATGAAAATGACGGGACT 59.344 41.667 0.00 0.00 0.00 3.85
624 641 4.962155 AGAGGATATGAAAATGACGGGAC 58.038 43.478 0.00 0.00 0.00 4.46
625 642 5.454755 GGAAGAGGATATGAAAATGACGGGA 60.455 44.000 0.00 0.00 0.00 5.14
626 643 4.757149 GGAAGAGGATATGAAAATGACGGG 59.243 45.833 0.00 0.00 0.00 5.28
648 665 4.415150 ATGCTGGGTGCCGTCAGG 62.415 66.667 0.00 0.00 42.00 3.86
658 698 1.202222 GCGTTCATTCAAGATGCTGGG 60.202 52.381 0.00 0.00 0.00 4.45
676 716 2.153945 GTTTGCATGCATGGTCGCG 61.154 57.895 27.34 0.00 33.35 5.87
731 776 0.608035 GGCCGGACATGAAAAGGACA 60.608 55.000 5.05 0.00 0.00 4.02
732 777 0.322546 AGGCCGGACATGAAAAGGAC 60.323 55.000 11.69 0.00 0.00 3.85
733 778 0.035439 GAGGCCGGACATGAAAAGGA 60.035 55.000 11.69 0.00 0.00 3.36
734 779 0.035056 AGAGGCCGGACATGAAAAGG 60.035 55.000 11.69 0.00 0.00 3.11
735 780 1.740025 GAAGAGGCCGGACATGAAAAG 59.260 52.381 11.69 0.00 0.00 2.27
736 781 1.073125 TGAAGAGGCCGGACATGAAAA 59.927 47.619 11.69 0.00 0.00 2.29
737 782 0.690192 TGAAGAGGCCGGACATGAAA 59.310 50.000 11.69 0.00 0.00 2.69
739 784 0.911769 AATGAAGAGGCCGGACATGA 59.088 50.000 11.69 0.00 0.00 3.07
740 785 1.303309 GAATGAAGAGGCCGGACATG 58.697 55.000 11.69 0.00 0.00 3.21
741 786 0.911769 TGAATGAAGAGGCCGGACAT 59.088 50.000 11.69 0.00 0.00 3.06
742 787 0.250234 CTGAATGAAGAGGCCGGACA 59.750 55.000 11.69 0.00 0.00 4.02
743 788 0.250513 ACTGAATGAAGAGGCCGGAC 59.749 55.000 5.05 0.00 0.00 4.79
745 790 0.539051 AGACTGAATGAAGAGGCCGG 59.461 55.000 0.00 0.00 0.00 6.13
746 791 1.480137 AGAGACTGAATGAAGAGGCCG 59.520 52.381 0.00 0.00 0.00 6.13
747 792 3.490078 CGTAGAGACTGAATGAAGAGGCC 60.490 52.174 0.00 0.00 0.00 5.19
756 801 5.736813 ACTCTAGTGACGTAGAGACTGAAT 58.263 41.667 17.78 0.00 46.32 2.57
762 807 3.192212 TCACGACTCTAGTGACGTAGAGA 59.808 47.826 18.83 11.44 46.32 3.10
800 845 1.353103 GCATGGTCGCCTTCATTCG 59.647 57.895 0.00 0.00 0.00 3.34
898 943 2.172851 TGGTTATGAGCCGTTCGTTT 57.827 45.000 0.00 0.00 0.00 3.60
904 949 2.779755 TGATGTTGGTTATGAGCCGT 57.220 45.000 0.00 0.00 0.00 5.68
915 960 1.381522 TGCACCGATGATGATGTTGG 58.618 50.000 0.00 0.00 0.00 3.77
985 1030 1.606668 GTTCATCACGGCACCAAGAAA 59.393 47.619 0.00 0.00 0.00 2.52
1095 1151 0.037232 GGAACAGGGTGTCGAAGAGG 60.037 60.000 0.00 0.00 36.95 3.69
1219 1284 3.692406 GAGCGGGGTGAAGACGGT 61.692 66.667 0.00 0.00 41.36 4.83
1297 1362 1.755393 AACCTCACACCTGGACGGAC 61.755 60.000 0.00 0.00 36.31 4.79
1311 1376 2.050714 TGTGCGACGACGAACCTC 60.051 61.111 15.68 0.00 46.47 3.85
1323 1388 4.111016 TCGCCGGAGTACTGTGCG 62.111 66.667 18.95 18.95 40.58 5.34
1327 1392 4.849329 GGCGTCGCCGGAGTACTG 62.849 72.222 22.50 0.95 39.62 2.74
1371 1436 3.647649 CTCGGTGTCATGCTCGGCA 62.648 63.158 1.01 1.01 44.86 5.69
1380 1445 1.300620 CAAGAACGCCTCGGTGTCA 60.301 57.895 2.16 0.00 37.94 3.58
1542 1607 2.664851 CAAAGCGACTGCCCGTCA 60.665 61.111 4.43 0.00 42.98 4.35
1626 1691 4.789075 CGGTCGAACATCGGCGGT 62.789 66.667 7.21 0.00 46.90 5.68
1735 1800 3.374402 CGTCCAGTCCGGCTCTGT 61.374 66.667 19.67 0.00 33.14 3.41
1797 1862 1.593750 GATGCGGCGCTTGAGAGAT 60.594 57.895 33.26 16.11 0.00 2.75
1800 1865 3.774528 AGGATGCGGCGCTTGAGA 61.775 61.111 33.26 12.97 0.00 3.27
1935 2492 3.243636 GGAACAGGAAGTACACGTCTTCA 60.244 47.826 15.06 0.00 41.88 3.02
2042 2599 3.753434 CGCAGAGGTCGCCTGTCT 61.753 66.667 2.98 0.00 31.76 3.41
2263 2826 3.141488 ACGATCTCCGCTCGGCTT 61.141 61.111 2.96 0.00 43.32 4.35
2307 2870 4.783621 GCGCTCCCACCAGCATCA 62.784 66.667 0.00 0.00 39.62 3.07
2394 2957 0.747255 ACGTGAGGCTCTTATGCGAT 59.253 50.000 16.72 1.94 0.00 4.58
2395 2958 0.179137 CACGTGAGGCTCTTATGCGA 60.179 55.000 10.90 0.00 0.00 5.10
2396 2959 0.458543 ACACGTGAGGCTCTTATGCG 60.459 55.000 25.01 13.68 0.00 4.73
2397 2960 2.579207 TACACGTGAGGCTCTTATGC 57.421 50.000 25.01 0.32 0.00 3.14
2398 2961 4.271049 CCAATTACACGTGAGGCTCTTATG 59.729 45.833 25.01 12.67 0.00 1.90
2399 2962 4.081087 ACCAATTACACGTGAGGCTCTTAT 60.081 41.667 25.01 0.00 0.00 1.73
2400 2963 3.259876 ACCAATTACACGTGAGGCTCTTA 59.740 43.478 25.01 0.00 0.00 2.10
2401 2964 2.038557 ACCAATTACACGTGAGGCTCTT 59.961 45.455 25.01 0.00 0.00 2.85
2402 2965 1.623811 ACCAATTACACGTGAGGCTCT 59.376 47.619 25.01 0.00 0.00 4.09
2403 2966 1.732259 CACCAATTACACGTGAGGCTC 59.268 52.381 25.01 7.79 0.00 4.70
2404 2967 1.610624 CCACCAATTACACGTGAGGCT 60.611 52.381 25.01 1.30 0.00 4.58
2405 2968 0.802494 CCACCAATTACACGTGAGGC 59.198 55.000 25.01 0.00 0.00 4.70
2406 2969 1.804151 CACCACCAATTACACGTGAGG 59.196 52.381 25.01 16.78 0.00 3.86
2407 2970 2.736721 CTCACCACCAATTACACGTGAG 59.263 50.000 25.01 6.17 40.70 3.51
2408 2971 2.103432 ACTCACCACCAATTACACGTGA 59.897 45.455 25.01 0.00 0.00 4.35
2409 2972 2.223144 CACTCACCACCAATTACACGTG 59.777 50.000 15.48 15.48 0.00 4.49
2410 2973 2.489971 CACTCACCACCAATTACACGT 58.510 47.619 0.00 0.00 0.00 4.49
2411 2974 1.804151 CCACTCACCACCAATTACACG 59.196 52.381 0.00 0.00 0.00 4.49
2412 2975 3.134574 TCCACTCACCACCAATTACAC 57.865 47.619 0.00 0.00 0.00 2.90
2413 2976 5.190726 TCATATCCACTCACCACCAATTACA 59.809 40.000 0.00 0.00 0.00 2.41
2414 2977 5.680619 TCATATCCACTCACCACCAATTAC 58.319 41.667 0.00 0.00 0.00 1.89
2415 2978 5.966853 TCATATCCACTCACCACCAATTA 57.033 39.130 0.00 0.00 0.00 1.40
2416 2979 4.860802 TCATATCCACTCACCACCAATT 57.139 40.909 0.00 0.00 0.00 2.32
2417 2980 4.413189 TGATCATATCCACTCACCACCAAT 59.587 41.667 0.00 0.00 0.00 3.16
2418 2981 3.779738 TGATCATATCCACTCACCACCAA 59.220 43.478 0.00 0.00 0.00 3.67
2419 2982 3.383223 TGATCATATCCACTCACCACCA 58.617 45.455 0.00 0.00 0.00 4.17
2420 2983 4.630644 ATGATCATATCCACTCACCACC 57.369 45.455 6.36 0.00 0.00 4.61
2421 2984 5.048013 TCGTATGATCATATCCACTCACCAC 60.048 44.000 18.18 3.06 0.00 4.16
2422 2985 5.076873 TCGTATGATCATATCCACTCACCA 58.923 41.667 18.18 0.00 0.00 4.17
2423 2986 5.644977 TCGTATGATCATATCCACTCACC 57.355 43.478 18.18 1.93 0.00 4.02
2437 3000 9.175312 ACTACATACGGATTTAGATCGTATGAT 57.825 33.333 29.27 19.75 43.23 2.45
2438 3001 8.557592 ACTACATACGGATTTAGATCGTATGA 57.442 34.615 29.27 17.47 43.23 2.15
2439 3002 9.622004 AAACTACATACGGATTTAGATCGTATG 57.378 33.333 24.18 24.18 44.33 2.39
2440 3003 9.622004 CAAACTACATACGGATTTAGATCGTAT 57.378 33.333 7.83 0.00 34.93 3.06
2441 3004 8.077991 CCAAACTACATACGGATTTAGATCGTA 58.922 37.037 7.83 0.00 32.84 3.43
2442 3005 6.921857 CCAAACTACATACGGATTTAGATCGT 59.078 38.462 7.83 0.00 32.84 3.73
2443 3006 6.921857 ACCAAACTACATACGGATTTAGATCG 59.078 38.462 7.83 0.00 32.84 3.69
2444 3007 8.658499 AACCAAACTACATACGGATTTAGATC 57.342 34.615 7.83 0.00 0.00 2.75
2446 3009 9.537192 CATAACCAAACTACATACGGATTTAGA 57.463 33.333 7.83 0.00 0.00 2.10
2447 3010 9.321562 ACATAACCAAACTACATACGGATTTAG 57.678 33.333 0.00 0.00 0.00 1.85
2448 3011 9.316730 GACATAACCAAACTACATACGGATTTA 57.683 33.333 0.00 0.00 0.00 1.40
2449 3012 8.044908 AGACATAACCAAACTACATACGGATTT 58.955 33.333 0.00 0.00 0.00 2.17
2450 3013 7.562135 AGACATAACCAAACTACATACGGATT 58.438 34.615 0.00 0.00 0.00 3.01
2451 3014 7.120923 AGACATAACCAAACTACATACGGAT 57.879 36.000 0.00 0.00 0.00 4.18
2452 3015 6.534475 AGACATAACCAAACTACATACGGA 57.466 37.500 0.00 0.00 0.00 4.69
2453 3016 8.761497 CATTAGACATAACCAAACTACATACGG 58.239 37.037 0.00 0.00 0.00 4.02
2454 3017 9.524106 TCATTAGACATAACCAAACTACATACG 57.476 33.333 0.00 0.00 0.00 3.06
2457 3020 8.879759 CGTTCATTAGACATAACCAAACTACAT 58.120 33.333 0.00 0.00 0.00 2.29
2458 3021 8.089597 TCGTTCATTAGACATAACCAAACTACA 58.910 33.333 0.00 0.00 0.00 2.74
2459 3022 8.470040 TCGTTCATTAGACATAACCAAACTAC 57.530 34.615 0.00 0.00 0.00 2.73
2460 3023 8.525316 TCTCGTTCATTAGACATAACCAAACTA 58.475 33.333 0.00 0.00 0.00 2.24
2461 3024 7.383687 TCTCGTTCATTAGACATAACCAAACT 58.616 34.615 0.00 0.00 0.00 2.66
2462 3025 7.201530 CCTCTCGTTCATTAGACATAACCAAAC 60.202 40.741 0.00 0.00 0.00 2.93
2463 3026 6.816640 CCTCTCGTTCATTAGACATAACCAAA 59.183 38.462 0.00 0.00 0.00 3.28
2464 3027 6.338146 CCTCTCGTTCATTAGACATAACCAA 58.662 40.000 0.00 0.00 0.00 3.67
2465 3028 5.163447 CCCTCTCGTTCATTAGACATAACCA 60.163 44.000 0.00 0.00 0.00 3.67
2466 3029 5.290386 CCCTCTCGTTCATTAGACATAACC 58.710 45.833 0.00 0.00 0.00 2.85
2467 3030 4.745620 GCCCTCTCGTTCATTAGACATAAC 59.254 45.833 0.00 0.00 0.00 1.89
2468 3031 4.649674 AGCCCTCTCGTTCATTAGACATAA 59.350 41.667 0.00 0.00 0.00 1.90
2469 3032 4.215908 AGCCCTCTCGTTCATTAGACATA 58.784 43.478 0.00 0.00 0.00 2.29
2470 3033 3.034635 AGCCCTCTCGTTCATTAGACAT 58.965 45.455 0.00 0.00 0.00 3.06
2471 3034 2.457598 AGCCCTCTCGTTCATTAGACA 58.542 47.619 0.00 0.00 0.00 3.41
2472 3035 3.548415 CGTAGCCCTCTCGTTCATTAGAC 60.548 52.174 0.00 0.00 0.00 2.59
2473 3036 2.617308 CGTAGCCCTCTCGTTCATTAGA 59.383 50.000 0.00 0.00 0.00 2.10
2474 3037 2.358267 ACGTAGCCCTCTCGTTCATTAG 59.642 50.000 0.00 0.00 34.07 1.73
2475 3038 2.098607 CACGTAGCCCTCTCGTTCATTA 59.901 50.000 0.00 0.00 35.62 1.90
2476 3039 1.135083 CACGTAGCCCTCTCGTTCATT 60.135 52.381 0.00 0.00 35.62 2.57
2477 3040 0.456221 CACGTAGCCCTCTCGTTCAT 59.544 55.000 0.00 0.00 35.62 2.57
2478 3041 0.892358 ACACGTAGCCCTCTCGTTCA 60.892 55.000 0.00 0.00 35.62 3.18
2479 3042 0.179169 GACACGTAGCCCTCTCGTTC 60.179 60.000 0.00 0.00 35.62 3.95
2480 3043 0.892358 TGACACGTAGCCCTCTCGTT 60.892 55.000 0.00 0.00 35.62 3.85
2481 3044 1.303074 TGACACGTAGCCCTCTCGT 60.303 57.895 0.00 0.00 38.34 4.18
2482 3045 1.429825 CTGACACGTAGCCCTCTCG 59.570 63.158 0.00 0.00 0.00 4.04
2483 3046 1.139947 GCTGACACGTAGCCCTCTC 59.860 63.158 0.00 0.00 35.15 3.20
2484 3047 3.289525 GCTGACACGTAGCCCTCT 58.710 61.111 0.00 0.00 35.15 3.69
2496 3059 2.102553 GCCTCGTAGTCGGCTGAC 59.897 66.667 18.39 18.39 45.86 3.51
2497 3060 1.320344 ATTGCCTCGTAGTCGGCTGA 61.320 55.000 0.00 0.00 43.30 4.26
2498 3061 0.460284 AATTGCCTCGTAGTCGGCTG 60.460 55.000 0.00 0.00 43.30 4.85
2499 3062 1.108776 TAATTGCCTCGTAGTCGGCT 58.891 50.000 0.00 0.00 43.30 5.52
2500 3063 1.792949 CATAATTGCCTCGTAGTCGGC 59.207 52.381 0.00 0.00 43.23 5.54
2501 3064 2.223971 ACCATAATTGCCTCGTAGTCGG 60.224 50.000 0.00 0.00 37.69 4.79
2502 3065 2.794910 CACCATAATTGCCTCGTAGTCG 59.205 50.000 0.00 0.00 38.55 4.18
2503 3066 3.802685 GTCACCATAATTGCCTCGTAGTC 59.197 47.826 0.00 0.00 0.00 2.59
2504 3067 3.451178 AGTCACCATAATTGCCTCGTAGT 59.549 43.478 0.00 0.00 0.00 2.73
2505 3068 4.060038 AGTCACCATAATTGCCTCGTAG 57.940 45.455 0.00 0.00 0.00 3.51
2506 3069 4.481368 AAGTCACCATAATTGCCTCGTA 57.519 40.909 0.00 0.00 0.00 3.43
2507 3070 3.350219 AAGTCACCATAATTGCCTCGT 57.650 42.857 0.00 0.00 0.00 4.18
2508 3071 7.490962 TTATAAAGTCACCATAATTGCCTCG 57.509 36.000 0.00 0.00 0.00 4.63
2519 3082 8.736244 GCACCTTAAGATTTTATAAAGTCACCA 58.264 33.333 19.33 4.75 0.00 4.17
2520 3083 8.957466 AGCACCTTAAGATTTTATAAAGTCACC 58.043 33.333 19.33 0.00 0.00 4.02
2526 3089 9.280174 CGGGATAGCACCTTAAGATTTTATAAA 57.720 33.333 3.36 0.00 0.00 1.40
2527 3090 7.881232 CCGGGATAGCACCTTAAGATTTTATAA 59.119 37.037 3.36 0.00 0.00 0.98
2528 3091 7.391620 CCGGGATAGCACCTTAAGATTTTATA 58.608 38.462 3.36 0.00 0.00 0.98
2529 3092 6.238648 CCGGGATAGCACCTTAAGATTTTAT 58.761 40.000 3.36 0.00 0.00 1.40
2530 3093 5.617252 CCGGGATAGCACCTTAAGATTTTA 58.383 41.667 3.36 0.00 0.00 1.52
2531 3094 4.461198 CCGGGATAGCACCTTAAGATTTT 58.539 43.478 3.36 0.00 0.00 1.82
2532 3095 3.747708 GCCGGGATAGCACCTTAAGATTT 60.748 47.826 2.18 0.00 0.00 2.17
2533 3096 2.224548 GCCGGGATAGCACCTTAAGATT 60.225 50.000 2.18 0.00 0.00 2.40
2534 3097 1.348036 GCCGGGATAGCACCTTAAGAT 59.652 52.381 2.18 0.00 0.00 2.40
2535 3098 0.756903 GCCGGGATAGCACCTTAAGA 59.243 55.000 2.18 0.00 0.00 2.10
2536 3099 0.759346 AGCCGGGATAGCACCTTAAG 59.241 55.000 2.18 0.00 0.00 1.85
2537 3100 1.209621 AAGCCGGGATAGCACCTTAA 58.790 50.000 2.18 0.00 0.00 1.85
2538 3101 2.091098 TAAGCCGGGATAGCACCTTA 57.909 50.000 2.18 0.00 0.00 2.69
2539 3102 1.209621 TTAAGCCGGGATAGCACCTT 58.790 50.000 2.18 0.00 0.00 3.50
2540 3103 1.348036 GATTAAGCCGGGATAGCACCT 59.652 52.381 2.18 0.00 0.00 4.00
2541 3104 1.348036 AGATTAAGCCGGGATAGCACC 59.652 52.381 2.18 0.00 0.00 5.01
2542 3105 2.300437 AGAGATTAAGCCGGGATAGCAC 59.700 50.000 2.18 0.00 0.00 4.40
2543 3106 2.563179 GAGAGATTAAGCCGGGATAGCA 59.437 50.000 2.18 0.00 0.00 3.49
2544 3107 2.416162 CGAGAGATTAAGCCGGGATAGC 60.416 54.545 2.18 0.00 0.00 2.97
2545 3108 2.164624 CCGAGAGATTAAGCCGGGATAG 59.835 54.545 2.18 0.00 36.81 2.08
2546 3109 2.168496 CCGAGAGATTAAGCCGGGATA 58.832 52.381 2.18 0.00 36.81 2.59
2547 3110 0.969894 CCGAGAGATTAAGCCGGGAT 59.030 55.000 2.18 0.00 36.81 3.85
2548 3111 0.106369 TCCGAGAGATTAAGCCGGGA 60.106 55.000 2.18 0.00 40.48 5.14
2549 3112 0.750850 TTCCGAGAGATTAAGCCGGG 59.249 55.000 2.18 0.00 40.48 5.73
2550 3113 2.596904 TTTCCGAGAGATTAAGCCGG 57.403 50.000 0.00 0.00 41.36 6.13
2551 3114 2.221981 GCATTTCCGAGAGATTAAGCCG 59.778 50.000 0.00 0.00 0.00 5.52
2552 3115 3.471680 AGCATTTCCGAGAGATTAAGCC 58.528 45.455 0.00 0.00 0.00 4.35
2553 3116 4.122776 TGAGCATTTCCGAGAGATTAAGC 58.877 43.478 0.00 0.00 0.00 3.09
2554 3117 5.595885 TCTGAGCATTTCCGAGAGATTAAG 58.404 41.667 0.00 0.00 0.00 1.85
2555 3118 5.452496 CCTCTGAGCATTTCCGAGAGATTAA 60.452 44.000 0.00 0.00 38.91 1.40
2556 3119 4.038522 CCTCTGAGCATTTCCGAGAGATTA 59.961 45.833 0.00 0.00 38.91 1.75
2557 3120 3.181467 CCTCTGAGCATTTCCGAGAGATT 60.181 47.826 0.00 0.00 38.91 2.40
2558 3121 2.364970 CCTCTGAGCATTTCCGAGAGAT 59.635 50.000 0.00 0.00 38.91 2.75
2559 3122 1.753649 CCTCTGAGCATTTCCGAGAGA 59.246 52.381 0.00 0.00 38.91 3.10
2560 3123 1.202510 CCCTCTGAGCATTTCCGAGAG 60.203 57.143 0.00 0.00 38.91 3.20
2561 3124 0.826715 CCCTCTGAGCATTTCCGAGA 59.173 55.000 0.00 0.00 38.91 4.04
2562 3125 0.826715 TCCCTCTGAGCATTTCCGAG 59.173 55.000 0.00 0.00 37.03 4.63
2563 3126 1.500474 ATCCCTCTGAGCATTTCCGA 58.500 50.000 0.00 0.00 0.00 4.55
2564 3127 2.630098 TCTATCCCTCTGAGCATTTCCG 59.370 50.000 0.00 0.00 0.00 4.30
2565 3128 3.900601 TCTCTATCCCTCTGAGCATTTCC 59.099 47.826 0.00 0.00 0.00 3.13
2566 3129 4.588528 ACTCTCTATCCCTCTGAGCATTTC 59.411 45.833 0.00 0.00 0.00 2.17
2567 3130 4.344679 CACTCTCTATCCCTCTGAGCATTT 59.655 45.833 0.00 0.00 0.00 2.32
2568 3131 3.896888 CACTCTCTATCCCTCTGAGCATT 59.103 47.826 0.00 0.00 0.00 3.56
2569 3132 3.117169 ACACTCTCTATCCCTCTGAGCAT 60.117 47.826 0.00 0.00 0.00 3.79
2570 3133 2.243478 ACACTCTCTATCCCTCTGAGCA 59.757 50.000 0.00 0.00 0.00 4.26
2571 3134 2.622942 CACACTCTCTATCCCTCTGAGC 59.377 54.545 0.00 0.00 0.00 4.26
2572 3135 3.631686 CACACACTCTCTATCCCTCTGAG 59.368 52.174 0.00 0.00 0.00 3.35
2573 3136 3.625853 CACACACTCTCTATCCCTCTGA 58.374 50.000 0.00 0.00 0.00 3.27
2574 3137 2.100584 GCACACACTCTCTATCCCTCTG 59.899 54.545 0.00 0.00 0.00 3.35
2575 3138 2.024464 AGCACACACTCTCTATCCCTCT 60.024 50.000 0.00 0.00 0.00 3.69
2576 3139 2.383855 AGCACACACTCTCTATCCCTC 58.616 52.381 0.00 0.00 0.00 4.30
2577 3140 2.499289 CAAGCACACACTCTCTATCCCT 59.501 50.000 0.00 0.00 0.00 4.20
2578 3141 2.898705 CAAGCACACACTCTCTATCCC 58.101 52.381 0.00 0.00 0.00 3.85
2579 3142 2.275318 GCAAGCACACACTCTCTATCC 58.725 52.381 0.00 0.00 0.00 2.59
2580 3143 1.923204 CGCAAGCACACACTCTCTATC 59.077 52.381 0.00 0.00 0.00 2.08
2581 3144 1.273606 ACGCAAGCACACACTCTCTAT 59.726 47.619 0.00 0.00 45.62 1.98
2582 3145 0.673985 ACGCAAGCACACACTCTCTA 59.326 50.000 0.00 0.00 45.62 2.43
2583 3146 0.179073 AACGCAAGCACACACTCTCT 60.179 50.000 0.00 0.00 45.62 3.10
2584 3147 0.233332 GAACGCAAGCACACACTCTC 59.767 55.000 0.00 0.00 45.62 3.20
2585 3148 0.461870 TGAACGCAAGCACACACTCT 60.462 50.000 0.00 0.00 45.62 3.24
2586 3149 0.588252 ATGAACGCAAGCACACACTC 59.412 50.000 0.00 0.00 45.62 3.51
2587 3150 1.877637 TATGAACGCAAGCACACACT 58.122 45.000 0.00 0.00 45.62 3.55
2588 3151 2.159430 TCATATGAACGCAAGCACACAC 59.841 45.455 1.98 0.00 45.62 3.82
2589 3152 2.421619 TCATATGAACGCAAGCACACA 58.578 42.857 1.98 0.00 45.62 3.72
2590 3153 3.680642 ATCATATGAACGCAAGCACAC 57.319 42.857 9.99 0.00 45.62 3.82
2591 3154 3.688673 TCAATCATATGAACGCAAGCACA 59.311 39.130 9.99 0.00 45.62 4.57
2592 3155 4.201851 ACTCAATCATATGAACGCAAGCAC 60.202 41.667 9.99 0.00 45.62 4.40
2593 3156 3.940852 ACTCAATCATATGAACGCAAGCA 59.059 39.130 9.99 0.00 45.62 3.91
2594 3157 4.201851 ACACTCAATCATATGAACGCAAGC 60.202 41.667 9.99 0.00 45.62 4.01
2596 3159 7.926018 AGTATACACTCAATCATATGAACGCAA 59.074 33.333 9.99 0.00 0.00 4.85
2597 3160 7.433680 AGTATACACTCAATCATATGAACGCA 58.566 34.615 9.99 0.00 0.00 5.24
2598 3161 7.875316 AGTATACACTCAATCATATGAACGC 57.125 36.000 9.99 0.00 0.00 4.84
2599 3162 9.249457 ACAAGTATACACTCAATCATATGAACG 57.751 33.333 9.99 3.96 32.29 3.95
2606 3169 9.317936 CACATACACAAGTATACACTCAATCAT 57.682 33.333 5.50 0.00 38.88 2.45
2607 3170 8.527810 TCACATACACAAGTATACACTCAATCA 58.472 33.333 5.50 0.00 38.88 2.57
2608 3171 8.926715 TCACATACACAAGTATACACTCAATC 57.073 34.615 5.50 0.00 38.88 2.67
2609 3172 7.492669 GCTCACATACACAAGTATACACTCAAT 59.507 37.037 5.50 0.00 38.88 2.57
2610 3173 6.811665 GCTCACATACACAAGTATACACTCAA 59.188 38.462 5.50 0.00 38.88 3.02
2611 3174 6.071616 TGCTCACATACACAAGTATACACTCA 60.072 38.462 5.50 0.00 38.88 3.41
2612 3175 6.330278 TGCTCACATACACAAGTATACACTC 58.670 40.000 5.50 0.00 38.88 3.51
2613 3176 6.280855 TGCTCACATACACAAGTATACACT 57.719 37.500 5.50 0.00 38.88 3.55
2614 3177 6.590292 AGTTGCTCACATACACAAGTATACAC 59.410 38.462 5.50 0.00 38.88 2.90
2615 3178 6.697395 AGTTGCTCACATACACAAGTATACA 58.303 36.000 5.50 0.00 38.88 2.29
2616 3179 7.462856 CGAAGTTGCTCACATACACAAGTATAC 60.463 40.741 0.00 0.00 38.88 1.47
2617 3180 6.530181 CGAAGTTGCTCACATACACAAGTATA 59.470 38.462 0.00 0.00 38.88 1.47
2618 3181 5.348724 CGAAGTTGCTCACATACACAAGTAT 59.651 40.000 0.00 0.00 41.57 2.12
2619 3182 4.684242 CGAAGTTGCTCACATACACAAGTA 59.316 41.667 0.00 0.00 34.10 2.24
2620 3183 3.494626 CGAAGTTGCTCACATACACAAGT 59.505 43.478 0.00 0.00 0.00 3.16
2621 3184 3.740832 TCGAAGTTGCTCACATACACAAG 59.259 43.478 0.00 0.00 0.00 3.16
2622 3185 3.723260 TCGAAGTTGCTCACATACACAA 58.277 40.909 0.00 0.00 0.00 3.33
2623 3186 3.378911 TCGAAGTTGCTCACATACACA 57.621 42.857 0.00 0.00 0.00 3.72
2624 3187 4.152402 ACAATCGAAGTTGCTCACATACAC 59.848 41.667 0.00 0.00 32.32 2.90
2625 3188 4.314961 ACAATCGAAGTTGCTCACATACA 58.685 39.130 0.00 0.00 32.32 2.29
2626 3189 4.928661 ACAATCGAAGTTGCTCACATAC 57.071 40.909 0.00 0.00 32.32 2.39
2627 3190 5.576774 CAGTACAATCGAAGTTGCTCACATA 59.423 40.000 0.00 0.00 32.32 2.29
2628 3191 4.389992 CAGTACAATCGAAGTTGCTCACAT 59.610 41.667 0.00 0.00 32.32 3.21
2629 3192 3.740832 CAGTACAATCGAAGTTGCTCACA 59.259 43.478 0.00 0.00 32.32 3.58
2630 3193 3.741344 ACAGTACAATCGAAGTTGCTCAC 59.259 43.478 0.00 0.00 32.32 3.51
2631 3194 3.990092 ACAGTACAATCGAAGTTGCTCA 58.010 40.909 0.00 0.00 32.32 4.26
2632 3195 6.037098 AGATACAGTACAATCGAAGTTGCTC 58.963 40.000 0.00 0.00 32.32 4.26
2633 3196 5.967088 AGATACAGTACAATCGAAGTTGCT 58.033 37.500 0.00 0.00 32.32 3.91
2634 3197 6.648725 AAGATACAGTACAATCGAAGTTGC 57.351 37.500 0.00 0.00 32.32 4.17
2680 3243 7.651808 CACCTGAAAATGGCATACCTATAAAG 58.348 38.462 0.00 0.00 36.63 1.85
2681 3244 6.040391 GCACCTGAAAATGGCATACCTATAAA 59.960 38.462 0.00 0.00 36.63 1.40
2682 3245 5.534654 GCACCTGAAAATGGCATACCTATAA 59.465 40.000 0.00 0.00 36.63 0.98
2683 3246 5.070001 GCACCTGAAAATGGCATACCTATA 58.930 41.667 0.00 0.00 36.63 1.31
2684 3247 3.891366 GCACCTGAAAATGGCATACCTAT 59.109 43.478 0.00 0.00 36.63 2.57
2685 3248 3.287222 GCACCTGAAAATGGCATACCTA 58.713 45.455 0.00 0.00 36.63 3.08
2686 3249 2.102578 GCACCTGAAAATGGCATACCT 58.897 47.619 0.00 0.00 36.63 3.08
2687 3250 1.136891 GGCACCTGAAAATGGCATACC 59.863 52.381 0.00 0.00 40.91 2.73
2688 3251 1.202290 CGGCACCTGAAAATGGCATAC 60.202 52.381 0.00 0.00 41.28 2.39
2689 3252 1.102154 CGGCACCTGAAAATGGCATA 58.898 50.000 0.00 0.00 41.28 3.14
2690 3253 0.611618 TCGGCACCTGAAAATGGCAT 60.612 50.000 0.00 0.00 41.28 4.40
2691 3254 1.228398 TCGGCACCTGAAAATGGCA 60.228 52.632 0.00 0.00 41.28 4.92
2692 3255 1.244019 ACTCGGCACCTGAAAATGGC 61.244 55.000 0.00 0.00 38.00 4.40
2693 3256 1.068333 CAACTCGGCACCTGAAAATGG 60.068 52.381 0.00 0.00 0.00 3.16
2694 3257 1.068333 CCAACTCGGCACCTGAAAATG 60.068 52.381 0.00 0.00 0.00 2.32
2695 3258 1.202879 TCCAACTCGGCACCTGAAAAT 60.203 47.619 0.00 0.00 33.14 1.82
2696 3259 0.181587 TCCAACTCGGCACCTGAAAA 59.818 50.000 0.00 0.00 33.14 2.29
2697 3260 0.181587 TTCCAACTCGGCACCTGAAA 59.818 50.000 0.00 0.00 33.14 2.69
2698 3261 0.400213 ATTCCAACTCGGCACCTGAA 59.600 50.000 0.00 0.00 33.14 3.02
2699 3262 0.036388 GATTCCAACTCGGCACCTGA 60.036 55.000 0.00 0.00 33.14 3.86
2700 3263 0.036010 AGATTCCAACTCGGCACCTG 60.036 55.000 0.00 0.00 33.14 4.00
2701 3264 0.250513 GAGATTCCAACTCGGCACCT 59.749 55.000 0.00 0.00 33.14 4.00
2702 3265 0.036388 TGAGATTCCAACTCGGCACC 60.036 55.000 0.00 0.00 37.22 5.01
2703 3266 2.029838 ATGAGATTCCAACTCGGCAC 57.970 50.000 0.00 0.00 37.22 5.01
2704 3267 2.237143 AGAATGAGATTCCAACTCGGCA 59.763 45.455 0.00 0.00 40.13 5.69
2705 3268 2.911484 AGAATGAGATTCCAACTCGGC 58.089 47.619 0.00 0.00 40.13 5.54
2706 3269 5.300539 TCTCTAGAATGAGATTCCAACTCGG 59.699 44.000 0.00 0.00 40.13 4.63
2707 3270 6.183360 TGTCTCTAGAATGAGATTCCAACTCG 60.183 42.308 0.00 0.00 43.84 4.18
2708 3271 6.978080 GTGTCTCTAGAATGAGATTCCAACTC 59.022 42.308 0.00 0.00 43.84 3.01
2709 3272 6.405286 CGTGTCTCTAGAATGAGATTCCAACT 60.405 42.308 0.00 0.00 43.84 3.16
2710 3273 5.746245 CGTGTCTCTAGAATGAGATTCCAAC 59.254 44.000 0.00 0.00 43.84 3.77
2711 3274 5.419155 ACGTGTCTCTAGAATGAGATTCCAA 59.581 40.000 0.00 0.00 43.84 3.53
2712 3275 4.950475 ACGTGTCTCTAGAATGAGATTCCA 59.050 41.667 0.00 0.00 43.84 3.53
2713 3276 5.508200 ACGTGTCTCTAGAATGAGATTCC 57.492 43.478 0.00 0.00 43.84 3.01
2714 3277 7.329717 ACAAAACGTGTCTCTAGAATGAGATTC 59.670 37.037 0.00 0.00 43.84 2.52
2715 3278 7.155328 ACAAAACGTGTCTCTAGAATGAGATT 58.845 34.615 0.00 0.00 43.84 2.40
2716 3279 6.692486 ACAAAACGTGTCTCTAGAATGAGAT 58.308 36.000 0.00 0.00 43.84 2.75
2717 3280 6.085555 ACAAAACGTGTCTCTAGAATGAGA 57.914 37.500 0.00 0.00 40.39 3.27
2730 3293 4.641094 TCTTACCCAATTGACAAAACGTGT 59.359 37.500 7.12 0.00 45.74 4.49
2731 3294 4.973663 GTCTTACCCAATTGACAAAACGTG 59.026 41.667 7.12 0.00 0.00 4.49
2732 3295 4.260866 CGTCTTACCCAATTGACAAAACGT 60.261 41.667 7.12 0.00 0.00 3.99
2733 3296 4.024725 TCGTCTTACCCAATTGACAAAACG 60.025 41.667 7.12 9.51 0.00 3.60
2734 3297 5.237779 TCTCGTCTTACCCAATTGACAAAAC 59.762 40.000 7.12 0.00 0.00 2.43
2735 3298 5.369833 TCTCGTCTTACCCAATTGACAAAA 58.630 37.500 7.12 0.00 0.00 2.44
2736 3299 4.963373 TCTCGTCTTACCCAATTGACAAA 58.037 39.130 7.12 0.00 0.00 2.83
2737 3300 4.610605 TCTCGTCTTACCCAATTGACAA 57.389 40.909 7.12 0.00 0.00 3.18
2738 3301 4.382685 GGATCTCGTCTTACCCAATTGACA 60.383 45.833 7.12 0.00 0.00 3.58
2739 3302 4.120589 GGATCTCGTCTTACCCAATTGAC 58.879 47.826 7.12 0.00 0.00 3.18
2740 3303 4.030913 AGGATCTCGTCTTACCCAATTGA 58.969 43.478 7.12 0.00 0.00 2.57
2741 3304 4.408182 AGGATCTCGTCTTACCCAATTG 57.592 45.455 0.00 0.00 0.00 2.32
2742 3305 4.960469 TGTAGGATCTCGTCTTACCCAATT 59.040 41.667 0.00 0.00 38.32 2.32
2743 3306 4.543689 TGTAGGATCTCGTCTTACCCAAT 58.456 43.478 0.00 0.00 38.32 3.16
2744 3307 3.952323 CTGTAGGATCTCGTCTTACCCAA 59.048 47.826 0.00 0.00 38.32 4.12
2745 3308 3.053842 ACTGTAGGATCTCGTCTTACCCA 60.054 47.826 0.00 0.00 38.32 4.51
2746 3309 3.553904 ACTGTAGGATCTCGTCTTACCC 58.446 50.000 0.00 0.00 38.32 3.69
2747 3310 4.639310 TGAACTGTAGGATCTCGTCTTACC 59.361 45.833 0.00 0.00 38.32 2.85
2748 3311 5.354792 AGTGAACTGTAGGATCTCGTCTTAC 59.645 44.000 0.00 0.00 39.24 2.34
2749 3312 5.354513 CAGTGAACTGTAGGATCTCGTCTTA 59.645 44.000 2.14 0.00 39.09 2.10
2750 3313 4.156922 CAGTGAACTGTAGGATCTCGTCTT 59.843 45.833 2.14 0.00 39.09 3.01
2751 3314 3.692101 CAGTGAACTGTAGGATCTCGTCT 59.308 47.826 2.14 0.00 39.09 4.18
2752 3315 4.022464 CAGTGAACTGTAGGATCTCGTC 57.978 50.000 2.14 0.00 39.09 4.20
2765 3328 6.064717 AGCCTCAAAGATAAAACAGTGAACT 58.935 36.000 0.00 0.00 0.00 3.01
2766 3329 6.319141 AGCCTCAAAGATAAAACAGTGAAC 57.681 37.500 0.00 0.00 0.00 3.18
2767 3330 6.735694 GCAAGCCTCAAAGATAAAACAGTGAA 60.736 38.462 0.00 0.00 0.00 3.18
2768 3331 5.278463 GCAAGCCTCAAAGATAAAACAGTGA 60.278 40.000 0.00 0.00 0.00 3.41
2769 3332 4.919754 GCAAGCCTCAAAGATAAAACAGTG 59.080 41.667 0.00 0.00 0.00 3.66
2770 3333 4.829492 AGCAAGCCTCAAAGATAAAACAGT 59.171 37.500 0.00 0.00 0.00 3.55
2771 3334 5.382618 AGCAAGCCTCAAAGATAAAACAG 57.617 39.130 0.00 0.00 0.00 3.16
2772 3335 5.562696 CGAAGCAAGCCTCAAAGATAAAACA 60.563 40.000 0.00 0.00 0.00 2.83
2773 3336 4.853743 CGAAGCAAGCCTCAAAGATAAAAC 59.146 41.667 0.00 0.00 0.00 2.43
2774 3337 4.518970 ACGAAGCAAGCCTCAAAGATAAAA 59.481 37.500 0.00 0.00 0.00 1.52
2775 3338 4.072131 ACGAAGCAAGCCTCAAAGATAAA 58.928 39.130 0.00 0.00 0.00 1.40
2776 3339 3.674997 ACGAAGCAAGCCTCAAAGATAA 58.325 40.909 0.00 0.00 0.00 1.75
2777 3340 3.334583 ACGAAGCAAGCCTCAAAGATA 57.665 42.857 0.00 0.00 0.00 1.98
2778 3341 2.191128 ACGAAGCAAGCCTCAAAGAT 57.809 45.000 0.00 0.00 0.00 2.40
2779 3342 1.603802 CAACGAAGCAAGCCTCAAAGA 59.396 47.619 0.00 0.00 0.00 2.52
2780 3343 1.927710 GCAACGAAGCAAGCCTCAAAG 60.928 52.381 0.00 0.00 0.00 2.77
2781 3344 0.030638 GCAACGAAGCAAGCCTCAAA 59.969 50.000 0.00 0.00 0.00 2.69
2797 3360 2.990740 AATTGAGTTAGGGGGTGCAA 57.009 45.000 0.00 0.00 0.00 4.08
2830 3394 3.673543 AAATAGATGGCGGGGGTTAAA 57.326 42.857 0.00 0.00 0.00 1.52
2833 3397 2.543037 AAAAATAGATGGCGGGGGTT 57.457 45.000 0.00 0.00 0.00 4.11
3015 3580 1.935873 GCTGCGTGATTGATTGAGCTA 59.064 47.619 0.00 0.00 0.00 3.32
3169 3734 1.375396 CGTGGGGAAACGAGATGCA 60.375 57.895 0.00 0.00 46.49 3.96
3203 3768 2.380410 GCGGTTCGTTCGATGCTGT 61.380 57.895 0.00 0.00 0.00 4.40
3211 3776 2.383027 AAAACAGCGGCGGTTCGTTC 62.383 55.000 18.39 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.