Multiple sequence alignment - TraesCS7A01G087800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G087800 chr7A 100.000 3585 0 0 1 3585 52683878 52680294 0.000000e+00 6621.0
1 TraesCS7A01G087800 chr7A 80.620 774 119 13 1597 2345 8372198 8372965 1.440000e-158 569.0
2 TraesCS7A01G087800 chr4A 90.238 2684 156 49 100 2745 664243472 664240857 0.000000e+00 3408.0
3 TraesCS7A01G087800 chr4A 88.816 760 71 10 100 856 664244491 664243743 0.000000e+00 920.0
4 TraesCS7A01G087800 chr4A 82.385 545 78 10 1597 2123 732770176 732770720 3.260000e-125 459.0
5 TraesCS7A01G087800 chr4A 96.154 104 2 2 1 102 247544943 247544840 6.160000e-38 169.0
6 TraesCS7A01G087800 chr7D 88.773 2298 134 55 660 2888 49802977 49800735 0.000000e+00 2700.0
7 TraesCS7A01G087800 chr7D 80.000 775 125 16 1597 2345 7444926 7445696 2.430000e-151 545.0
8 TraesCS7A01G087800 chr7D 89.121 239 21 4 2909 3143 49800609 49800372 3.500000e-75 292.0
9 TraesCS7A01G087800 chr7D 82.286 175 28 2 1152 1326 7444692 7444863 8.020000e-32 148.0
10 TraesCS7A01G087800 chr4B 92.535 710 47 4 1428 2131 86635355 86636064 0.000000e+00 1013.0
11 TraesCS7A01G087800 chr4B 91.477 704 41 10 2134 2818 86636105 86636808 0.000000e+00 950.0
12 TraesCS7A01G087800 chr4B 94.025 318 9 4 1031 1345 86634999 86635309 1.160000e-129 473.0
13 TraesCS7A01G087800 chr4B 87.168 226 19 5 799 1021 86634740 86634958 7.690000e-62 248.0
14 TraesCS7A01G087800 chr3D 82.176 432 74 2 100 530 3008182 3007753 5.650000e-98 368.0
15 TraesCS7A01G087800 chr3D 89.320 103 11 0 2023 2125 179161328 179161226 2.900000e-26 130.0
16 TraesCS7A01G087800 chr5D 92.611 203 13 2 3383 3584 420996397 420996196 1.260000e-74 291.0
17 TraesCS7A01G087800 chr5D 90.521 211 20 0 3374 3584 446037975 446038185 2.730000e-71 279.0
18 TraesCS7A01G087800 chr2B 92.611 203 14 1 3383 3584 757357816 757357614 1.260000e-74 291.0
19 TraesCS7A01G087800 chr2B 91.089 202 18 0 3383 3584 111361965 111361764 1.270000e-69 274.0
20 TraesCS7A01G087800 chr2B 86.792 53 6 1 57 109 706799237 706799186 1.390000e-04 58.4
21 TraesCS7A01G087800 chr3B 91.584 202 17 0 3383 3584 816706052 816705851 2.730000e-71 279.0
22 TraesCS7A01G087800 chr3B 91.133 203 18 0 3383 3585 764108090 764108292 3.530000e-70 276.0
23 TraesCS7A01G087800 chr3B 94.030 67 1 2 44 109 85255180 85255244 8.190000e-17 99.0
24 TraesCS7A01G087800 chr1B 90.865 208 19 0 3377 3584 507923249 507923042 2.730000e-71 279.0
25 TraesCS7A01G087800 chr3A 91.133 203 18 0 3383 3585 379841697 379841495 3.530000e-70 276.0
26 TraesCS7A01G087800 chr3A 91.892 74 2 3 31 100 205316714 205316641 2.280000e-17 100.0
27 TraesCS7A01G087800 chr7B 89.640 222 14 1 1910 2131 649282486 649282698 1.270000e-69 274.0
28 TraesCS7A01G087800 chr7B 94.828 58 2 1 44 100 511467662 511467719 4.930000e-14 89.8
29 TraesCS7A01G087800 chr2D 88.393 224 24 2 3362 3584 632759362 632759584 5.900000e-68 268.0
30 TraesCS7A01G087800 chr5A 97.030 101 2 1 1 100 588664486 588664386 6.160000e-38 169.0
31 TraesCS7A01G087800 chr5A 96.970 99 2 1 1 98 50541995 50541897 7.960000e-37 165.0
32 TraesCS7A01G087800 chr5A 96.040 101 3 1 1 100 15338063 15337963 2.860000e-36 163.0
33 TraesCS7A01G087800 chr6B 89.362 47 4 1 56 102 24748781 24748736 1.390000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G087800 chr7A 52680294 52683878 3584 True 6621.0 6621 100.00000 1 3585 1 chr7A.!!$R1 3584
1 TraesCS7A01G087800 chr7A 8372198 8372965 767 False 569.0 569 80.62000 1597 2345 1 chr7A.!!$F1 748
2 TraesCS7A01G087800 chr4A 664240857 664244491 3634 True 2164.0 3408 89.52700 100 2745 2 chr4A.!!$R2 2645
3 TraesCS7A01G087800 chr4A 732770176 732770720 544 False 459.0 459 82.38500 1597 2123 1 chr4A.!!$F1 526
4 TraesCS7A01G087800 chr7D 49800372 49802977 2605 True 1496.0 2700 88.94700 660 3143 2 chr7D.!!$R1 2483
5 TraesCS7A01G087800 chr7D 7444692 7445696 1004 False 346.5 545 81.14300 1152 2345 2 chr7D.!!$F1 1193
6 TraesCS7A01G087800 chr4B 86634740 86636808 2068 False 671.0 1013 91.30125 799 2818 4 chr4B.!!$F1 2019

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.033011 AGGAGGTGCTGGTCGATAGT 60.033 55.0 0.00 0.00 37.40 2.12 F
518 1541 0.181114 ACGGTCATGCATGCTACCAT 59.819 50.0 27.86 16.63 32.04 3.55 F
1345 2423 0.660595 GTGAGTGAGTCCACACGACG 60.661 60.0 0.00 0.00 46.92 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1107 2181 0.594284 GTCTCGCGCTATACCACCAC 60.594 60.0 5.56 0.0 0.00 4.16 R
1575 2677 1.027357 GCCACCATGCAAGATCGATT 58.973 50.0 0.00 0.0 0.00 3.34 R
3234 4597 0.804364 GCATTCAGCAACCATCACGA 59.196 50.0 0.00 0.0 44.79 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.768633 CATGTAGGAGGTGCTGGTC 57.231 57.895 0.00 0.00 0.00 4.02
19 20 0.179100 CATGTAGGAGGTGCTGGTCG 60.179 60.000 0.00 0.00 0.00 4.79
20 21 0.324368 ATGTAGGAGGTGCTGGTCGA 60.324 55.000 0.00 0.00 0.00 4.20
21 22 0.324368 TGTAGGAGGTGCTGGTCGAT 60.324 55.000 0.00 0.00 0.00 3.59
22 23 1.064240 TGTAGGAGGTGCTGGTCGATA 60.064 52.381 0.00 0.00 0.00 2.92
23 24 1.609555 GTAGGAGGTGCTGGTCGATAG 59.390 57.143 0.00 0.00 0.00 2.08
24 25 0.033011 AGGAGGTGCTGGTCGATAGT 60.033 55.000 0.00 0.00 37.40 2.12
25 26 0.824759 GGAGGTGCTGGTCGATAGTT 59.175 55.000 0.00 0.00 37.40 2.24
26 27 2.029623 GGAGGTGCTGGTCGATAGTTA 58.970 52.381 0.00 0.00 37.40 2.24
27 28 2.223758 GGAGGTGCTGGTCGATAGTTAC 60.224 54.545 0.00 0.00 37.40 2.50
28 29 1.755380 AGGTGCTGGTCGATAGTTACC 59.245 52.381 14.44 14.44 36.24 2.85
29 30 1.479323 GGTGCTGGTCGATAGTTACCA 59.521 52.381 16.02 7.11 43.47 3.25
30 31 2.102588 GGTGCTGGTCGATAGTTACCAT 59.897 50.000 16.02 0.00 44.56 3.55
31 32 3.123804 GTGCTGGTCGATAGTTACCATG 58.876 50.000 0.00 0.00 44.56 3.66
32 33 2.102420 TGCTGGTCGATAGTTACCATGG 59.898 50.000 11.19 11.19 44.56 3.66
33 34 2.548067 GCTGGTCGATAGTTACCATGGG 60.548 54.545 18.09 0.00 44.56 4.00
34 35 2.963101 CTGGTCGATAGTTACCATGGGA 59.037 50.000 18.09 3.85 44.56 4.37
35 36 2.963101 TGGTCGATAGTTACCATGGGAG 59.037 50.000 18.09 0.00 40.84 4.30
36 37 2.963782 GGTCGATAGTTACCATGGGAGT 59.036 50.000 18.09 9.71 35.73 3.85
37 38 3.387050 GGTCGATAGTTACCATGGGAGTT 59.613 47.826 18.09 1.75 35.73 3.01
38 39 4.586001 GGTCGATAGTTACCATGGGAGTTA 59.414 45.833 18.09 4.25 35.73 2.24
39 40 5.069516 GGTCGATAGTTACCATGGGAGTTAA 59.930 44.000 18.09 2.29 35.73 2.01
40 41 6.214399 GTCGATAGTTACCATGGGAGTTAAG 58.786 44.000 18.09 1.12 37.40 1.85
41 42 5.303589 TCGATAGTTACCATGGGAGTTAAGG 59.696 44.000 18.09 0.00 37.40 2.69
42 43 5.303589 CGATAGTTACCATGGGAGTTAAGGA 59.696 44.000 18.09 0.00 0.00 3.36
43 44 4.838904 AGTTACCATGGGAGTTAAGGAC 57.161 45.455 18.09 0.00 0.00 3.85
44 45 4.172807 AGTTACCATGGGAGTTAAGGACA 58.827 43.478 18.09 0.00 0.00 4.02
45 46 4.788617 AGTTACCATGGGAGTTAAGGACAT 59.211 41.667 18.09 0.00 0.00 3.06
46 47 3.933861 ACCATGGGAGTTAAGGACATC 57.066 47.619 18.09 0.00 0.00 3.06
47 48 3.189606 ACCATGGGAGTTAAGGACATCA 58.810 45.455 18.09 0.00 0.00 3.07
48 49 3.200825 ACCATGGGAGTTAAGGACATCAG 59.799 47.826 18.09 0.00 0.00 2.90
49 50 3.455910 CCATGGGAGTTAAGGACATCAGA 59.544 47.826 2.85 0.00 0.00 3.27
50 51 4.444022 CCATGGGAGTTAAGGACATCAGAG 60.444 50.000 2.85 0.00 0.00 3.35
51 52 3.791320 TGGGAGTTAAGGACATCAGAGT 58.209 45.455 0.00 0.00 0.00 3.24
52 53 3.769844 TGGGAGTTAAGGACATCAGAGTC 59.230 47.826 0.00 0.00 37.80 3.36
53 54 3.769844 GGGAGTTAAGGACATCAGAGTCA 59.230 47.826 0.00 0.00 40.29 3.41
54 55 4.223032 GGGAGTTAAGGACATCAGAGTCAA 59.777 45.833 0.00 0.00 40.29 3.18
55 56 5.280011 GGGAGTTAAGGACATCAGAGTCAAA 60.280 44.000 0.00 0.00 40.29 2.69
56 57 6.410540 GGAGTTAAGGACATCAGAGTCAAAT 58.589 40.000 0.00 0.00 40.29 2.32
57 58 7.364762 GGGAGTTAAGGACATCAGAGTCAAATA 60.365 40.741 0.00 0.00 40.29 1.40
58 59 8.041323 GGAGTTAAGGACATCAGAGTCAAATAA 58.959 37.037 0.00 0.00 40.29 1.40
59 60 8.779354 AGTTAAGGACATCAGAGTCAAATAAC 57.221 34.615 0.00 0.00 40.29 1.89
60 61 8.375506 AGTTAAGGACATCAGAGTCAAATAACA 58.624 33.333 1.56 0.00 40.29 2.41
61 62 8.999431 GTTAAGGACATCAGAGTCAAATAACAA 58.001 33.333 0.00 0.00 40.29 2.83
62 63 9.567776 TTAAGGACATCAGAGTCAAATAACAAA 57.432 29.630 0.00 0.00 40.29 2.83
63 64 7.678947 AGGACATCAGAGTCAAATAACAAAG 57.321 36.000 0.00 0.00 40.29 2.77
64 65 7.227156 AGGACATCAGAGTCAAATAACAAAGT 58.773 34.615 0.00 0.00 40.29 2.66
65 66 7.721399 AGGACATCAGAGTCAAATAACAAAGTT 59.279 33.333 0.00 0.00 40.29 2.66
66 67 8.017946 GGACATCAGAGTCAAATAACAAAGTTC 58.982 37.037 0.00 0.00 40.29 3.01
67 68 8.450578 ACATCAGAGTCAAATAACAAAGTTCA 57.549 30.769 0.00 0.00 0.00 3.18
68 69 8.902806 ACATCAGAGTCAAATAACAAAGTTCAA 58.097 29.630 0.00 0.00 0.00 2.69
69 70 9.173939 CATCAGAGTCAAATAACAAAGTTCAAC 57.826 33.333 0.00 0.00 0.00 3.18
70 71 7.703328 TCAGAGTCAAATAACAAAGTTCAACC 58.297 34.615 0.00 0.00 0.00 3.77
71 72 6.632834 CAGAGTCAAATAACAAAGTTCAACCG 59.367 38.462 0.00 0.00 0.00 4.44
72 73 6.317893 AGAGTCAAATAACAAAGTTCAACCGT 59.682 34.615 0.00 0.00 0.00 4.83
73 74 7.496591 AGAGTCAAATAACAAAGTTCAACCGTA 59.503 33.333 0.00 0.00 0.00 4.02
74 75 7.636326 AGTCAAATAACAAAGTTCAACCGTAG 58.364 34.615 0.00 0.00 0.00 3.51
75 76 6.358822 GTCAAATAACAAAGTTCAACCGTAGC 59.641 38.462 0.00 0.00 0.00 3.58
76 77 6.038382 TCAAATAACAAAGTTCAACCGTAGCA 59.962 34.615 0.00 0.00 0.00 3.49
77 78 6.380095 AATAACAAAGTTCAACCGTAGCAA 57.620 33.333 0.00 0.00 0.00 3.91
78 79 3.685836 ACAAAGTTCAACCGTAGCAAC 57.314 42.857 0.00 0.00 0.00 4.17
88 89 3.124921 GTAGCAACGCACGGGCAT 61.125 61.111 11.77 0.00 41.24 4.40
89 90 2.359354 TAGCAACGCACGGGCATT 60.359 55.556 11.77 0.00 41.24 3.56
90 91 1.969064 TAGCAACGCACGGGCATTT 60.969 52.632 11.77 0.00 41.24 2.32
91 92 2.193865 TAGCAACGCACGGGCATTTG 62.194 55.000 11.77 13.80 41.24 2.32
92 93 2.334653 CAACGCACGGGCATTTGT 59.665 55.556 11.77 0.00 41.24 2.83
93 94 2.015627 CAACGCACGGGCATTTGTG 61.016 57.895 11.77 0.00 41.24 3.33
98 99 2.555123 CACGGGCATTTGTGCTAGT 58.445 52.632 0.07 0.00 34.73 2.57
110 111 6.628856 GCATTTGTGCTAGTATTGACAATACG 59.371 38.462 25.40 16.71 46.51 3.06
144 1164 2.448582 TTCCCCCAACAGCGACACT 61.449 57.895 0.00 0.00 0.00 3.55
153 1173 3.100817 CAACAGCGACACTTTCAACAAG 58.899 45.455 0.00 0.00 0.00 3.16
158 1178 3.632145 AGCGACACTTTCAACAAGGAAAT 59.368 39.130 0.00 0.00 36.29 2.17
172 1192 4.468510 ACAAGGAAATGATGCATGGACATT 59.531 37.500 2.46 4.98 36.07 2.71
176 1196 4.142116 GGAAATGATGCATGGACATTGACA 60.142 41.667 2.46 0.00 35.00 3.58
179 1199 2.614983 TGATGCATGGACATTGACATCG 59.385 45.455 2.46 0.00 37.35 3.84
180 1200 2.112380 TGCATGGACATTGACATCGT 57.888 45.000 0.00 0.00 0.00 3.73
183 1203 2.539476 CATGGACATTGACATCGTCGA 58.461 47.619 0.00 0.00 34.95 4.20
190 1210 4.000325 ACATTGACATCGTCGAATCCAAA 59.000 39.130 0.00 0.00 34.95 3.28
197 1217 7.151976 TGACATCGTCGAATCCAAACATATAT 58.848 34.615 0.00 0.00 34.95 0.86
199 1219 6.929049 ACATCGTCGAATCCAAACATATATGT 59.071 34.615 12.75 12.75 44.20 2.29
206 1226 8.367156 TCGAATCCAAACATATATGTCAGATCA 58.633 33.333 18.52 6.78 40.80 2.92
226 1246 6.950041 AGATCATGAATTTTCACCCAGAAGAA 59.050 34.615 0.00 0.00 40.49 2.52
233 1253 2.951229 TCACCCAGAAGAAAAGGACC 57.049 50.000 0.00 0.00 0.00 4.46
290 1310 2.137177 AAACCGCCACTGCCAGGTAT 62.137 55.000 0.00 0.00 35.68 2.73
304 1324 2.966516 CCAGGTATACCCAGAGAAGGTC 59.033 54.545 18.65 0.00 38.89 3.85
346 1366 0.737219 AACTCGAGACCCGGTATTCG 59.263 55.000 21.68 14.77 39.14 3.34
391 1412 0.951558 CTATATTGCCGCCACCAACC 59.048 55.000 0.00 0.00 0.00 3.77
411 1434 2.109126 GCCCGTGGAGAAGTCATGC 61.109 63.158 0.00 0.00 0.00 4.06
418 1441 2.097142 GTGGAGAAGTCATGCAGCAATC 59.903 50.000 0.00 0.00 0.00 2.67
439 1462 1.785321 CCGAACAACACGGGAATCG 59.215 57.895 0.00 0.00 45.65 3.34
448 1471 0.880278 CACGGGAATCGCGGATCAAT 60.880 55.000 22.95 0.00 43.94 2.57
449 1472 0.880278 ACGGGAATCGCGGATCAATG 60.880 55.000 22.95 1.46 43.94 2.82
457 1480 1.078709 CGCGGATCAATGTGAACACT 58.921 50.000 0.00 0.00 0.00 3.55
466 1489 7.224557 CGGATCAATGTGAACACTACATATCAA 59.775 37.037 6.51 0.00 37.77 2.57
478 1501 5.979517 CACTACATATCAATTGCTGAGACGA 59.020 40.000 0.00 0.00 37.52 4.20
480 1503 4.758688 ACATATCAATTGCTGAGACGACA 58.241 39.130 0.00 0.00 37.52 4.35
486 1509 4.399303 TCAATTGCTGAGACGACAGATCTA 59.601 41.667 0.00 0.00 39.94 1.98
487 1510 4.991153 ATTGCTGAGACGACAGATCTAA 57.009 40.909 0.00 0.00 39.94 2.10
488 1511 3.766676 TGCTGAGACGACAGATCTAAC 57.233 47.619 0.00 0.00 39.94 2.34
489 1512 3.081804 TGCTGAGACGACAGATCTAACA 58.918 45.455 0.00 0.00 39.94 2.41
490 1513 3.506067 TGCTGAGACGACAGATCTAACAA 59.494 43.478 0.00 0.00 39.94 2.83
491 1514 4.158579 TGCTGAGACGACAGATCTAACAAT 59.841 41.667 0.00 0.00 39.94 2.71
492 1515 4.502282 GCTGAGACGACAGATCTAACAATG 59.498 45.833 0.00 0.00 39.94 2.82
493 1516 4.424626 TGAGACGACAGATCTAACAATGC 58.575 43.478 0.00 0.00 0.00 3.56
494 1517 4.082245 TGAGACGACAGATCTAACAATGCA 60.082 41.667 0.00 0.00 0.00 3.96
501 1524 4.389992 ACAGATCTAACAATGCAGACAACG 59.610 41.667 0.00 0.00 0.00 4.10
503 1526 3.120321 TCTAACAATGCAGACAACGGT 57.880 42.857 0.00 0.00 0.00 4.83
504 1527 3.064207 TCTAACAATGCAGACAACGGTC 58.936 45.455 0.00 0.00 44.66 4.79
505 1528 1.674359 AACAATGCAGACAACGGTCA 58.326 45.000 0.00 0.00 46.80 4.02
515 1538 1.062587 GACAACGGTCATGCATGCTAC 59.937 52.381 22.25 15.27 43.73 3.58
518 1541 0.181114 ACGGTCATGCATGCTACCAT 59.819 50.000 27.86 16.63 32.04 3.55
552 1583 1.675641 GCACACCCTGACCATCACC 60.676 63.158 0.00 0.00 0.00 4.02
554 1585 2.268920 CACCCTGACCATCACCGG 59.731 66.667 0.00 0.00 0.00 5.28
559 1590 1.448540 CTGACCATCACCGGAGCAC 60.449 63.158 9.46 0.00 0.00 4.40
589 1620 2.069273 CCAGTGAAGACGAACCATCAC 58.931 52.381 0.00 0.00 41.88 3.06
597 1628 2.511600 GAACCATCACGAGGGCGG 60.512 66.667 0.00 0.00 43.17 6.13
651 1682 2.986306 GCCAGGTCACATGCAGCAC 61.986 63.158 0.00 0.00 0.00 4.40
665 1696 3.807538 GCACCACCGAGCATGCAG 61.808 66.667 21.98 13.31 38.00 4.41
734 1767 9.049523 GCATCATATCATGTTCAGTTTCTCTTA 57.950 33.333 0.00 0.00 0.00 2.10
781 1814 3.670627 CGATCGCAATCTCGGTCATCATA 60.671 47.826 0.26 0.00 39.40 2.15
811 1848 8.352942 ACACAATTAAGAGTGGCTAAAGAAAAG 58.647 33.333 12.88 0.00 39.99 2.27
812 1849 8.567948 CACAATTAAGAGTGGCTAAAGAAAAGA 58.432 33.333 2.90 0.00 32.24 2.52
844 1881 3.573538 TGTTTGATTACTGCTGCCATTGT 59.426 39.130 0.00 0.00 0.00 2.71
871 1908 4.501433 AGATCTCCTTCCTATCCTGCATT 58.499 43.478 0.00 0.00 0.00 3.56
872 1909 4.286549 AGATCTCCTTCCTATCCTGCATTG 59.713 45.833 0.00 0.00 0.00 2.82
873 1910 2.105477 TCTCCTTCCTATCCTGCATTGC 59.895 50.000 0.46 0.46 0.00 3.56
874 1911 2.106166 CTCCTTCCTATCCTGCATTGCT 59.894 50.000 10.49 0.00 0.00 3.91
875 1912 2.511218 TCCTTCCTATCCTGCATTGCTT 59.489 45.455 10.49 0.00 0.00 3.91
876 1913 2.883386 CCTTCCTATCCTGCATTGCTTC 59.117 50.000 10.49 0.00 0.00 3.86
1066 2140 0.883833 CTTCTTGTTCCAGCGGCATT 59.116 50.000 1.45 0.00 0.00 3.56
1107 2181 4.005650 TGACTTGGTGTACTCTACTACGG 58.994 47.826 0.00 0.00 0.00 4.02
1224 2302 3.434319 GTGATGGTGGCGCTGGTG 61.434 66.667 7.64 0.00 0.00 4.17
1345 2423 0.660595 GTGAGTGAGTCCACACGACG 60.661 60.000 0.00 0.00 46.92 5.12
1362 2444 2.538037 CGACGTCCATTTCGATTGCATA 59.462 45.455 10.58 0.00 37.43 3.14
1363 2445 3.184379 CGACGTCCATTTCGATTGCATAT 59.816 43.478 10.58 0.00 37.43 1.78
1364 2446 4.318760 CGACGTCCATTTCGATTGCATATT 60.319 41.667 10.58 0.00 37.43 1.28
1365 2447 5.095691 ACGTCCATTTCGATTGCATATTC 57.904 39.130 0.00 0.00 0.00 1.75
1366 2448 4.574421 ACGTCCATTTCGATTGCATATTCA 59.426 37.500 0.00 0.00 0.00 2.57
1367 2449 5.239306 ACGTCCATTTCGATTGCATATTCAT 59.761 36.000 0.00 0.00 0.00 2.57
1368 2450 6.144854 CGTCCATTTCGATTGCATATTCATT 58.855 36.000 0.00 0.00 0.00 2.57
1369 2451 6.087159 CGTCCATTTCGATTGCATATTCATTG 59.913 38.462 0.00 0.00 0.00 2.82
1370 2452 5.921976 TCCATTTCGATTGCATATTCATTGC 59.078 36.000 0.00 0.00 40.55 3.56
1408 2503 6.067217 AGCCTTGTTCTGATTATACTGGTT 57.933 37.500 0.00 0.00 0.00 3.67
1409 2504 6.485171 AGCCTTGTTCTGATTATACTGGTTT 58.515 36.000 0.00 0.00 0.00 3.27
1410 2505 6.599638 AGCCTTGTTCTGATTATACTGGTTTC 59.400 38.462 0.00 0.00 0.00 2.78
1411 2506 6.456988 GCCTTGTTCTGATTATACTGGTTTCG 60.457 42.308 0.00 0.00 0.00 3.46
1413 2508 6.045072 TGTTCTGATTATACTGGTTTCGGT 57.955 37.500 0.00 0.00 36.32 4.69
1415 2510 6.938030 TGTTCTGATTATACTGGTTTCGGTTT 59.062 34.615 0.00 0.00 33.86 3.27
1416 2511 7.118680 TGTTCTGATTATACTGGTTTCGGTTTC 59.881 37.037 0.00 0.00 33.86 2.78
1417 2512 6.703319 TCTGATTATACTGGTTTCGGTTTCA 58.297 36.000 0.00 0.00 33.86 2.69
1418 2513 7.335627 TCTGATTATACTGGTTTCGGTTTCAT 58.664 34.615 0.00 0.00 33.86 2.57
1419 2514 8.479689 TCTGATTATACTGGTTTCGGTTTCATA 58.520 33.333 0.00 0.00 33.86 2.15
1420 2515 8.428186 TGATTATACTGGTTTCGGTTTCATAC 57.572 34.615 0.00 0.00 33.86 2.39
1422 2517 9.106070 GATTATACTGGTTTCGGTTTCATACTT 57.894 33.333 0.00 0.00 33.86 2.24
1423 2518 8.851541 TTATACTGGTTTCGGTTTCATACTTT 57.148 30.769 0.00 0.00 33.86 2.66
1424 2519 5.684550 ACTGGTTTCGGTTTCATACTTTC 57.315 39.130 0.00 0.00 0.00 2.62
1425 2520 5.127491 ACTGGTTTCGGTTTCATACTTTCA 58.873 37.500 0.00 0.00 0.00 2.69
1426 2521 5.768164 ACTGGTTTCGGTTTCATACTTTCAT 59.232 36.000 0.00 0.00 0.00 2.57
1530 2628 8.874744 ATTCTTTCCTTGATCAAATCTTCTCA 57.125 30.769 9.88 0.00 0.00 3.27
1542 2640 7.678947 TCAAATCTTCTCAGTTTGATCTTCC 57.321 36.000 0.00 0.00 37.05 3.46
1550 2652 5.409520 TCTCAGTTTGATCTTCCAATCAACG 59.590 40.000 0.00 0.00 43.48 4.10
1575 2677 5.361571 ACGGTTGGATCATATAGTGTACACA 59.638 40.000 27.06 13.77 0.00 3.72
1736 2868 1.979693 GAGTCGCTCCACCTCAGGT 60.980 63.158 0.00 0.00 35.62 4.00
1872 3016 2.770048 CTCCCCTTCATCCCCGCT 60.770 66.667 0.00 0.00 0.00 5.52
2020 3176 1.302033 CTGCAACGCCTTCCTGTCT 60.302 57.895 0.00 0.00 0.00 3.41
2045 3201 3.706373 GCTTCCTCCAGGTCGCCA 61.706 66.667 0.00 0.00 36.34 5.69
2125 3287 0.989602 TCCTCACCGTCCTCTACTCA 59.010 55.000 0.00 0.00 0.00 3.41
2265 3485 4.681978 GGGGCTGTGTTCGTCGCT 62.682 66.667 0.00 0.00 0.00 4.93
2307 3527 2.549563 GGTCATCGTCTGCATCATGGAT 60.550 50.000 0.00 0.00 0.00 3.41
2371 3596 5.991328 ACACACCTATAGAAATTCATGCG 57.009 39.130 0.00 0.00 0.00 4.73
2375 3600 6.478673 CACACCTATAGAAATTCATGCGTGTA 59.521 38.462 5.68 0.00 0.00 2.90
2469 3704 3.812053 GTGGGATCTGTGATTGTGATAGC 59.188 47.826 0.00 0.00 0.00 2.97
2598 3839 4.321452 GCAGCCATGACTGAAGATTGAAAA 60.321 41.667 13.82 0.00 40.25 2.29
2615 3856 6.824305 TTGAAAAACAGAGATCCTCCATTC 57.176 37.500 0.00 0.00 0.00 2.67
2622 3863 2.896685 AGAGATCCTCCATTCGGTGATC 59.103 50.000 0.00 0.00 39.71 2.92
2643 3884 4.797471 TCTGTTAACATGTGCAGCAAATC 58.203 39.130 9.13 0.00 0.00 2.17
2791 4043 6.116126 ACTATTACCATGTTTCTGGAGAAGC 58.884 40.000 0.00 0.00 39.73 3.86
2795 4047 2.932614 CCATGTTTCTGGAGAAGCGTAG 59.067 50.000 0.00 0.00 38.69 3.51
2857 4112 6.068010 TCTGGCTATACATGTAATTTTGGGG 58.932 40.000 10.14 0.00 0.00 4.96
2867 4122 6.555360 ACATGTAATTTTGGGGGTAAAAGACA 59.445 34.615 0.00 0.00 35.55 3.41
2868 4123 6.658188 TGTAATTTTGGGGGTAAAAGACAG 57.342 37.500 0.00 0.00 33.49 3.51
2869 4124 4.617253 AATTTTGGGGGTAAAAGACAGC 57.383 40.909 0.00 0.00 33.49 4.40
2875 4164 2.963101 GGGGGTAAAAGACAGCTGTTTT 59.037 45.455 22.65 19.29 0.00 2.43
2902 4191 2.610859 AACCAGCCCACGGGAGAT 60.611 61.111 6.21 0.00 37.50 2.75
2903 4192 1.306654 AACCAGCCCACGGGAGATA 60.307 57.895 6.21 0.00 37.50 1.98
2904 4193 1.623542 AACCAGCCCACGGGAGATAC 61.624 60.000 6.21 0.00 37.50 2.24
2905 4194 2.063979 CCAGCCCACGGGAGATACA 61.064 63.158 6.21 0.00 37.50 2.29
2907 4196 0.250038 CAGCCCACGGGAGATACATG 60.250 60.000 6.21 0.00 37.50 3.21
2934 4294 0.179137 CTTGATCGCACGAGTAGGCA 60.179 55.000 0.00 0.00 0.00 4.75
2938 4298 2.296814 ATCGCACGAGTAGGCATGCA 62.297 55.000 21.36 0.00 37.97 3.96
2992 4352 9.449719 AAAAATCCAAGAATTAGTAGACATCGT 57.550 29.630 0.00 0.00 0.00 3.73
2998 4358 7.706607 CCAAGAATTAGTAGACATCGTCATTCA 59.293 37.037 0.00 0.00 34.60 2.57
3009 4369 2.905075 TCGTCATTCAATTGCTCGGAT 58.095 42.857 0.00 0.00 0.00 4.18
3010 4370 3.270027 TCGTCATTCAATTGCTCGGATT 58.730 40.909 0.00 0.00 0.00 3.01
3015 4375 6.456853 CGTCATTCAATTGCTCGGATTTCTTA 60.457 38.462 0.00 0.00 0.00 2.10
3016 4376 6.688813 GTCATTCAATTGCTCGGATTTCTTAC 59.311 38.462 0.00 0.00 0.00 2.34
3017 4377 6.599244 TCATTCAATTGCTCGGATTTCTTACT 59.401 34.615 0.00 0.00 0.00 2.24
3019 4379 6.182039 TCAATTGCTCGGATTTCTTACTTG 57.818 37.500 0.00 0.00 0.00 3.16
3020 4380 4.622701 ATTGCTCGGATTTCTTACTTGC 57.377 40.909 0.00 0.00 0.00 4.01
3021 4381 3.334583 TGCTCGGATTTCTTACTTGCT 57.665 42.857 0.00 0.00 0.00 3.91
3023 4383 3.684788 TGCTCGGATTTCTTACTTGCTTC 59.315 43.478 0.00 0.00 0.00 3.86
3024 4384 3.684788 GCTCGGATTTCTTACTTGCTTCA 59.315 43.478 0.00 0.00 0.00 3.02
3025 4385 4.154195 GCTCGGATTTCTTACTTGCTTCAA 59.846 41.667 0.00 0.00 0.00 2.69
3080 4441 9.630098 CAATCTAAATTTCAGTACAACTTGCAT 57.370 29.630 0.00 0.00 0.00 3.96
3129 4492 9.911788 AGATTGGATAGACACAAATTCATAACT 57.088 29.630 0.00 0.00 0.00 2.24
3194 4557 9.139174 AGCGATATTTTTAGAAATTTTGTGTGG 57.861 29.630 0.00 0.00 36.82 4.17
3195 4558 8.921670 GCGATATTTTTAGAAATTTTGTGTGGT 58.078 29.630 0.00 0.00 36.82 4.16
3200 4563 8.472683 TTTTTAGAAATTTTGTGTGGTCAGTG 57.527 30.769 0.00 0.00 0.00 3.66
3201 4564 6.767524 TTAGAAATTTTGTGTGGTCAGTGT 57.232 33.333 0.00 0.00 0.00 3.55
3202 4565 7.867305 TTAGAAATTTTGTGTGGTCAGTGTA 57.133 32.000 0.00 0.00 0.00 2.90
3203 4566 6.767524 AGAAATTTTGTGTGGTCAGTGTAA 57.232 33.333 0.00 0.00 0.00 2.41
3204 4567 6.795399 AGAAATTTTGTGTGGTCAGTGTAAG 58.205 36.000 0.00 0.00 0.00 2.34
3205 4568 6.377146 AGAAATTTTGTGTGGTCAGTGTAAGT 59.623 34.615 0.00 0.00 0.00 2.24
3206 4569 6.524101 AATTTTGTGTGGTCAGTGTAAGTT 57.476 33.333 0.00 0.00 0.00 2.66
3207 4570 7.633193 AATTTTGTGTGGTCAGTGTAAGTTA 57.367 32.000 0.00 0.00 0.00 2.24
3208 4571 7.817418 ATTTTGTGTGGTCAGTGTAAGTTAT 57.183 32.000 0.00 0.00 0.00 1.89
3209 4572 6.854496 TTTGTGTGGTCAGTGTAAGTTATC 57.146 37.500 0.00 0.00 0.00 1.75
3210 4573 5.538849 TGTGTGGTCAGTGTAAGTTATCA 57.461 39.130 0.00 0.00 0.00 2.15
3211 4574 6.109156 TGTGTGGTCAGTGTAAGTTATCAT 57.891 37.500 0.00 0.00 0.00 2.45
3212 4575 5.931724 TGTGTGGTCAGTGTAAGTTATCATG 59.068 40.000 0.00 0.00 0.00 3.07
3213 4576 5.932303 GTGTGGTCAGTGTAAGTTATCATGT 59.068 40.000 0.00 0.00 0.00 3.21
3214 4577 5.931724 TGTGGTCAGTGTAAGTTATCATGTG 59.068 40.000 0.00 0.00 0.00 3.21
3215 4578 6.163476 GTGGTCAGTGTAAGTTATCATGTGA 58.837 40.000 0.00 0.00 0.00 3.58
3216 4579 6.090898 GTGGTCAGTGTAAGTTATCATGTGAC 59.909 42.308 14.41 14.41 33.54 3.67
3217 4580 6.014584 TGGTCAGTGTAAGTTATCATGTGACT 60.015 38.462 17.91 0.00 34.15 3.41
3218 4581 7.177744 TGGTCAGTGTAAGTTATCATGTGACTA 59.822 37.037 17.91 14.05 34.15 2.59
3219 4582 7.488471 GGTCAGTGTAAGTTATCATGTGACTAC 59.512 40.741 17.91 0.00 34.15 2.73
3220 4583 8.027189 GTCAGTGTAAGTTATCATGTGACTACA 58.973 37.037 14.91 0.00 41.89 2.74
3221 4584 8.581578 TCAGTGTAAGTTATCATGTGACTACAA 58.418 33.333 0.00 0.00 40.84 2.41
3222 4585 9.371136 CAGTGTAAGTTATCATGTGACTACAAT 57.629 33.333 0.00 0.00 40.84 2.71
3223 4586 9.944376 AGTGTAAGTTATCATGTGACTACAATT 57.056 29.630 0.00 0.00 40.84 2.32
3236 4599 9.684448 ATGTGACTACAATTAGAAGATATGTCG 57.316 33.333 0.00 0.00 40.84 4.35
3237 4600 8.683615 TGTGACTACAATTAGAAGATATGTCGT 58.316 33.333 0.00 0.00 32.88 4.34
3238 4601 8.959058 GTGACTACAATTAGAAGATATGTCGTG 58.041 37.037 0.00 0.00 0.00 4.35
3239 4602 8.899771 TGACTACAATTAGAAGATATGTCGTGA 58.100 33.333 0.00 0.00 0.00 4.35
3240 4603 9.900710 GACTACAATTAGAAGATATGTCGTGAT 57.099 33.333 0.00 0.00 0.00 3.06
3241 4604 9.684448 ACTACAATTAGAAGATATGTCGTGATG 57.316 33.333 0.00 0.00 0.00 3.07
3242 4605 7.953158 ACAATTAGAAGATATGTCGTGATGG 57.047 36.000 0.00 0.00 0.00 3.51
3243 4606 7.500992 ACAATTAGAAGATATGTCGTGATGGT 58.499 34.615 0.00 0.00 0.00 3.55
3244 4607 7.987458 ACAATTAGAAGATATGTCGTGATGGTT 59.013 33.333 0.00 0.00 0.00 3.67
3245 4608 7.953158 ATTAGAAGATATGTCGTGATGGTTG 57.047 36.000 0.00 0.00 0.00 3.77
3246 4609 4.122776 AGAAGATATGTCGTGATGGTTGC 58.877 43.478 0.00 0.00 0.00 4.17
3247 4610 3.827008 AGATATGTCGTGATGGTTGCT 57.173 42.857 0.00 0.00 0.00 3.91
3248 4611 3.461061 AGATATGTCGTGATGGTTGCTG 58.539 45.455 0.00 0.00 0.00 4.41
3249 4612 3.132824 AGATATGTCGTGATGGTTGCTGA 59.867 43.478 0.00 0.00 0.00 4.26
3250 4613 2.183478 ATGTCGTGATGGTTGCTGAA 57.817 45.000 0.00 0.00 0.00 3.02
3251 4614 2.183478 TGTCGTGATGGTTGCTGAAT 57.817 45.000 0.00 0.00 0.00 2.57
3252 4615 1.805943 TGTCGTGATGGTTGCTGAATG 59.194 47.619 0.00 0.00 0.00 2.67
3253 4616 0.804364 TCGTGATGGTTGCTGAATGC 59.196 50.000 0.00 0.00 43.25 3.56
3269 4632 7.766219 GCTGAATGCAATAGATTTGAATTGT 57.234 32.000 0.00 0.00 42.31 2.71
3270 4633 7.618442 GCTGAATGCAATAGATTTGAATTGTG 58.382 34.615 0.00 0.00 42.31 3.33
3271 4634 7.254319 GCTGAATGCAATAGATTTGAATTGTGG 60.254 37.037 0.00 0.00 42.31 4.17
3272 4635 7.042950 TGAATGCAATAGATTTGAATTGTGGG 58.957 34.615 0.00 0.00 35.86 4.61
3273 4636 5.999205 TGCAATAGATTTGAATTGTGGGT 57.001 34.783 0.00 0.00 35.86 4.51
3274 4637 6.357579 TGCAATAGATTTGAATTGTGGGTT 57.642 33.333 0.00 0.00 35.86 4.11
3275 4638 6.767456 TGCAATAGATTTGAATTGTGGGTTT 58.233 32.000 0.00 0.00 35.86 3.27
3276 4639 7.222872 TGCAATAGATTTGAATTGTGGGTTTT 58.777 30.769 0.00 0.00 35.86 2.43
3277 4640 8.370940 TGCAATAGATTTGAATTGTGGGTTTTA 58.629 29.630 0.00 0.00 35.86 1.52
3278 4641 9.213799 GCAATAGATTTGAATTGTGGGTTTTAA 57.786 29.630 0.00 0.00 35.86 1.52
3282 4645 8.846943 AGATTTGAATTGTGGGTTTTAAATCC 57.153 30.769 0.00 0.00 35.16 3.01
3283 4646 8.659527 AGATTTGAATTGTGGGTTTTAAATCCT 58.340 29.630 8.57 0.00 35.16 3.24
3284 4647 9.283768 GATTTGAATTGTGGGTTTTAAATCCTT 57.716 29.630 8.57 0.00 30.88 3.36
3287 4650 9.936759 TTGAATTGTGGGTTTTAAATCCTTATC 57.063 29.630 8.57 1.29 0.00 1.75
3288 4651 9.320295 TGAATTGTGGGTTTTAAATCCTTATCT 57.680 29.630 8.57 0.00 0.00 1.98
3291 4654 8.950007 TTGTGGGTTTTAAATCCTTATCTTCT 57.050 30.769 8.57 0.00 0.00 2.85
3292 4655 8.575649 TGTGGGTTTTAAATCCTTATCTTCTC 57.424 34.615 8.57 0.07 0.00 2.87
3293 4656 8.390921 TGTGGGTTTTAAATCCTTATCTTCTCT 58.609 33.333 8.57 0.00 0.00 3.10
3294 4657 8.894731 GTGGGTTTTAAATCCTTATCTTCTCTC 58.105 37.037 8.57 0.00 0.00 3.20
3295 4658 8.836735 TGGGTTTTAAATCCTTATCTTCTCTCT 58.163 33.333 8.57 0.00 0.00 3.10
3330 4693 8.666129 AAGTTATCCTCTCCCGATATTAATCA 57.334 34.615 0.00 0.00 31.93 2.57
3331 4694 8.846423 AGTTATCCTCTCCCGATATTAATCAT 57.154 34.615 0.00 0.00 31.93 2.45
3332 4695 8.919145 AGTTATCCTCTCCCGATATTAATCATC 58.081 37.037 0.00 0.00 31.93 2.92
3333 4696 8.696374 GTTATCCTCTCCCGATATTAATCATCA 58.304 37.037 0.00 0.00 31.93 3.07
3334 4697 7.927683 ATCCTCTCCCGATATTAATCATCAT 57.072 36.000 0.00 0.00 31.93 2.45
3336 4699 8.470657 TCCTCTCCCGATATTAATCATCATAG 57.529 38.462 0.00 0.00 31.93 2.23
3337 4700 7.014711 TCCTCTCCCGATATTAATCATCATAGC 59.985 40.741 0.00 0.00 31.93 2.97
3338 4701 7.015098 CCTCTCCCGATATTAATCATCATAGCT 59.985 40.741 0.00 0.00 31.93 3.32
3339 4702 8.996651 TCTCCCGATATTAATCATCATAGCTA 57.003 34.615 0.00 0.00 31.93 3.32
3340 4703 9.593565 TCTCCCGATATTAATCATCATAGCTAT 57.406 33.333 0.00 0.00 31.93 2.97
3379 4742 8.783660 TCTATATCTATACAAAGGGGCTATGG 57.216 38.462 0.00 0.00 0.00 2.74
3380 4743 6.831664 ATATCTATACAAAGGGGCTATGGG 57.168 41.667 0.00 0.00 0.00 4.00
3381 4744 3.949430 TCTATACAAAGGGGCTATGGGT 58.051 45.455 0.00 0.00 0.00 4.51
3382 4745 3.650942 TCTATACAAAGGGGCTATGGGTG 59.349 47.826 0.00 0.00 0.00 4.61
3383 4746 1.974028 TACAAAGGGGCTATGGGTGA 58.026 50.000 0.00 0.00 0.00 4.02
3384 4747 1.080638 ACAAAGGGGCTATGGGTGAA 58.919 50.000 0.00 0.00 0.00 3.18
3385 4748 1.272480 ACAAAGGGGCTATGGGTGAAC 60.272 52.381 0.00 0.00 0.00 3.18
3386 4749 0.335019 AAAGGGGCTATGGGTGAACC 59.665 55.000 0.00 0.00 40.81 3.62
3407 4770 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
3408 4771 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
3409 4772 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
3410 4773 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
3411 4774 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
3412 4775 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
3413 4776 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
3415 4778 3.246203 TGGTTGGATGGTTAGAGGGACTA 60.246 47.826 0.00 0.00 41.55 2.59
3416 4779 3.974642 GGTTGGATGGTTAGAGGGACTAT 59.025 47.826 0.00 0.00 41.55 2.12
3417 4780 4.202367 GGTTGGATGGTTAGAGGGACTATG 60.202 50.000 0.00 0.00 41.55 2.23
3418 4781 3.587498 TGGATGGTTAGAGGGACTATGG 58.413 50.000 0.00 0.00 41.55 2.74
3419 4782 3.051341 TGGATGGTTAGAGGGACTATGGT 60.051 47.826 0.00 0.00 41.55 3.55
3420 4783 4.171243 TGGATGGTTAGAGGGACTATGGTA 59.829 45.833 0.00 0.00 41.55 3.25
3421 4784 5.162760 TGGATGGTTAGAGGGACTATGGTAT 60.163 44.000 0.00 0.00 41.55 2.73
3422 4785 5.422650 GGATGGTTAGAGGGACTATGGTATC 59.577 48.000 0.00 0.00 41.55 2.24
3423 4786 4.748701 TGGTTAGAGGGACTATGGTATCC 58.251 47.826 0.00 0.00 41.55 2.59
3433 4796 4.430388 TGGTATCCCCACCCCATC 57.570 61.111 0.00 0.00 38.72 3.51
3434 4797 1.402375 TGGTATCCCCACCCCATCA 59.598 57.895 0.00 0.00 38.72 3.07
3435 4798 0.697511 TGGTATCCCCACCCCATCAG 60.698 60.000 0.00 0.00 38.72 2.90
3436 4799 1.427072 GGTATCCCCACCCCATCAGG 61.427 65.000 0.00 0.00 31.91 3.86
3454 4817 3.010200 AGGGTTCAAATCCTGATGCTC 57.990 47.619 0.00 0.00 38.36 4.26
3455 4818 1.672881 GGGTTCAAATCCTGATGCTCG 59.327 52.381 0.00 0.00 32.78 5.03
3456 4819 1.064654 GGTTCAAATCCTGATGCTCGC 59.935 52.381 0.00 0.00 32.78 5.03
3457 4820 1.739466 GTTCAAATCCTGATGCTCGCA 59.261 47.619 0.00 0.00 32.78 5.10
3458 4821 2.336945 TCAAATCCTGATGCTCGCAT 57.663 45.000 3.70 3.70 39.69 4.73
3459 4822 2.646930 TCAAATCCTGATGCTCGCATT 58.353 42.857 5.79 0.00 36.70 3.56
3460 4823 3.018856 TCAAATCCTGATGCTCGCATTT 58.981 40.909 5.79 0.00 36.70 2.32
3461 4824 4.198530 TCAAATCCTGATGCTCGCATTTA 58.801 39.130 5.79 0.00 36.70 1.40
3462 4825 4.823442 TCAAATCCTGATGCTCGCATTTAT 59.177 37.500 5.79 0.00 36.70 1.40
3463 4826 5.300034 TCAAATCCTGATGCTCGCATTTATT 59.700 36.000 5.79 1.98 36.70 1.40
3464 4827 5.368256 AATCCTGATGCTCGCATTTATTC 57.632 39.130 5.79 0.00 36.70 1.75
3465 4828 3.141398 TCCTGATGCTCGCATTTATTCC 58.859 45.455 5.79 0.00 36.70 3.01
3466 4829 3.144506 CCTGATGCTCGCATTTATTCCT 58.855 45.455 5.79 0.00 36.70 3.36
3467 4830 4.040339 TCCTGATGCTCGCATTTATTCCTA 59.960 41.667 5.79 0.00 36.70 2.94
3468 4831 4.940046 CCTGATGCTCGCATTTATTCCTAT 59.060 41.667 5.79 0.00 36.70 2.57
3469 4832 6.070824 TCCTGATGCTCGCATTTATTCCTATA 60.071 38.462 5.79 0.00 36.70 1.31
3470 4833 6.765036 CCTGATGCTCGCATTTATTCCTATAT 59.235 38.462 5.79 0.00 36.70 0.86
3471 4834 7.281774 CCTGATGCTCGCATTTATTCCTATATT 59.718 37.037 5.79 0.00 36.70 1.28
3472 4835 8.565896 TGATGCTCGCATTTATTCCTATATTT 57.434 30.769 5.79 0.00 36.70 1.40
3473 4836 9.665719 TGATGCTCGCATTTATTCCTATATTTA 57.334 29.630 5.79 0.00 36.70 1.40
3496 4859 3.079960 TCAGGATTTCTGACGATACGC 57.920 47.619 0.00 0.00 46.71 4.42
3497 4860 2.425668 TCAGGATTTCTGACGATACGCA 59.574 45.455 0.00 0.00 46.71 5.24
3498 4861 3.068165 TCAGGATTTCTGACGATACGCAT 59.932 43.478 0.00 0.00 46.71 4.73
3499 4862 3.804325 CAGGATTTCTGACGATACGCATT 59.196 43.478 0.00 0.00 46.18 3.56
3500 4863 4.271049 CAGGATTTCTGACGATACGCATTT 59.729 41.667 0.00 0.00 46.18 2.32
3501 4864 5.462068 CAGGATTTCTGACGATACGCATTTA 59.538 40.000 0.00 0.00 46.18 1.40
3502 4865 6.019075 CAGGATTTCTGACGATACGCATTTAA 60.019 38.462 0.00 0.00 46.18 1.52
3503 4866 6.706270 AGGATTTCTGACGATACGCATTTAAT 59.294 34.615 0.00 0.00 0.00 1.40
3504 4867 6.792250 GGATTTCTGACGATACGCATTTAATG 59.208 38.462 0.00 0.00 0.00 1.90
3505 4868 5.651172 TTCTGACGATACGCATTTAATGG 57.349 39.130 7.08 0.03 0.00 3.16
3507 4870 4.055360 CTGACGATACGCATTTAATGGGA 58.945 43.478 25.11 11.46 45.09 4.37
3508 4871 4.055360 TGACGATACGCATTTAATGGGAG 58.945 43.478 25.11 15.66 45.09 4.30
3509 4872 4.202172 TGACGATACGCATTTAATGGGAGA 60.202 41.667 25.11 14.21 45.09 3.71
3510 4873 4.699637 ACGATACGCATTTAATGGGAGAA 58.300 39.130 25.11 12.24 45.09 2.87
3511 4874 4.750098 ACGATACGCATTTAATGGGAGAAG 59.250 41.667 25.11 15.93 45.09 2.85
3512 4875 4.988540 CGATACGCATTTAATGGGAGAAGA 59.011 41.667 25.11 7.96 45.09 2.87
3513 4876 5.107453 CGATACGCATTTAATGGGAGAAGAC 60.107 44.000 25.11 10.80 45.09 3.01
3514 4877 2.936498 ACGCATTTAATGGGAGAAGACG 59.064 45.455 25.11 11.30 45.09 4.18
3515 4878 2.936498 CGCATTTAATGGGAGAAGACGT 59.064 45.455 15.57 0.00 45.09 4.34
3516 4879 3.374058 CGCATTTAATGGGAGAAGACGTT 59.626 43.478 15.57 0.00 45.09 3.99
3517 4880 4.494199 CGCATTTAATGGGAGAAGACGTTC 60.494 45.833 15.57 0.00 45.09 3.95
3518 4881 4.201920 GCATTTAATGGGAGAAGACGTTCC 60.202 45.833 7.08 0.00 32.48 3.62
3529 4892 2.353839 ACGTTCCCGTCGACAACG 60.354 61.111 27.79 27.79 46.28 4.10
3538 4901 4.084265 TCGACAACGAGGCACCTA 57.916 55.556 0.00 0.00 43.81 3.08
3539 4902 1.582968 TCGACAACGAGGCACCTAC 59.417 57.895 0.00 0.00 43.81 3.18
3540 4903 1.800315 CGACAACGAGGCACCTACG 60.800 63.158 0.00 0.00 42.66 3.51
3541 4904 1.445582 GACAACGAGGCACCTACGG 60.446 63.158 11.43 0.00 0.00 4.02
3542 4905 2.151049 GACAACGAGGCACCTACGGT 62.151 60.000 11.43 4.08 35.62 4.83
3555 4918 4.102035 ACCTACGGTGACTTCGTAAATC 57.898 45.455 0.00 0.00 41.62 2.17
3556 4919 3.760684 ACCTACGGTGACTTCGTAAATCT 59.239 43.478 0.00 0.00 41.62 2.40
3557 4920 4.142513 ACCTACGGTGACTTCGTAAATCTC 60.143 45.833 0.00 0.00 41.62 2.75
3558 4921 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
3559 4922 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
3560 4923 3.985925 ACGGTGACTTCGTAAATCTCAAC 59.014 43.478 0.00 0.00 39.22 3.18
3561 4924 3.985279 CGGTGACTTCGTAAATCTCAACA 59.015 43.478 0.00 0.00 0.00 3.33
3562 4925 4.625742 CGGTGACTTCGTAAATCTCAACAT 59.374 41.667 0.00 0.00 0.00 2.71
3563 4926 5.444613 CGGTGACTTCGTAAATCTCAACATG 60.445 44.000 0.00 0.00 0.00 3.21
3564 4927 5.637810 GGTGACTTCGTAAATCTCAACATGA 59.362 40.000 0.00 0.00 0.00 3.07
3565 4928 6.313905 GGTGACTTCGTAAATCTCAACATGAT 59.686 38.462 0.00 0.00 0.00 2.45
3566 4929 7.491372 GGTGACTTCGTAAATCTCAACATGATA 59.509 37.037 0.00 0.00 0.00 2.15
3567 4930 9.035607 GTGACTTCGTAAATCTCAACATGATAT 57.964 33.333 0.00 0.00 0.00 1.63
3568 4931 9.034544 TGACTTCGTAAATCTCAACATGATATG 57.965 33.333 0.00 0.00 0.00 1.78
3569 4932 7.855545 ACTTCGTAAATCTCAACATGATATGC 58.144 34.615 0.00 0.00 0.00 3.14
3570 4933 7.712639 ACTTCGTAAATCTCAACATGATATGCT 59.287 33.333 0.00 0.00 0.00 3.79
3571 4934 7.412137 TCGTAAATCTCAACATGATATGCTG 57.588 36.000 0.00 0.00 0.00 4.41
3572 4935 6.424812 TCGTAAATCTCAACATGATATGCTGG 59.575 38.462 0.00 0.00 0.00 4.85
3573 4936 5.449107 AAATCTCAACATGATATGCTGGC 57.551 39.130 0.00 0.00 0.00 4.85
3574 4937 3.851458 TCTCAACATGATATGCTGGCT 57.149 42.857 0.00 0.00 0.00 4.75
3575 4938 3.736720 TCTCAACATGATATGCTGGCTC 58.263 45.455 0.00 0.00 0.00 4.70
3576 4939 3.135167 TCTCAACATGATATGCTGGCTCA 59.865 43.478 0.00 0.00 0.00 4.26
3577 4940 3.473625 TCAACATGATATGCTGGCTCAG 58.526 45.455 0.00 0.00 34.12 3.35
3578 4941 3.118149 TCAACATGATATGCTGGCTCAGT 60.118 43.478 0.00 0.00 33.43 3.41
3579 4942 3.123157 ACATGATATGCTGGCTCAGTC 57.877 47.619 0.00 0.00 33.43 3.51
3580 4943 2.704596 ACATGATATGCTGGCTCAGTCT 59.295 45.455 0.00 0.00 33.43 3.24
3581 4944 3.136077 ACATGATATGCTGGCTCAGTCTT 59.864 43.478 0.00 0.00 33.43 3.01
3582 4945 3.920231 TGATATGCTGGCTCAGTCTTT 57.080 42.857 4.45 0.00 33.43 2.52
3583 4946 3.801698 TGATATGCTGGCTCAGTCTTTC 58.198 45.455 4.45 0.00 33.43 2.62
3584 4947 3.198417 TGATATGCTGGCTCAGTCTTTCA 59.802 43.478 4.45 1.87 33.43 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.179100 CGACCAGCACCTCCTACATG 60.179 60.000 0.00 0.00 0.00 3.21
1 2 0.324368 TCGACCAGCACCTCCTACAT 60.324 55.000 0.00 0.00 0.00 2.29
2 3 0.324368 ATCGACCAGCACCTCCTACA 60.324 55.000 0.00 0.00 0.00 2.74
5 6 0.033011 ACTATCGACCAGCACCTCCT 60.033 55.000 0.00 0.00 0.00 3.69
7 8 2.223758 GGTAACTATCGACCAGCACCTC 60.224 54.545 10.69 0.00 35.65 3.85
8 9 1.755380 GGTAACTATCGACCAGCACCT 59.245 52.381 10.69 0.00 35.65 4.00
9 10 1.479323 TGGTAACTATCGACCAGCACC 59.521 52.381 10.91 10.91 40.87 5.01
10 11 2.953466 TGGTAACTATCGACCAGCAC 57.047 50.000 0.00 0.00 40.87 4.40
15 16 2.963782 ACTCCCATGGTAACTATCGACC 59.036 50.000 11.73 0.00 36.17 4.79
16 17 4.667519 AACTCCCATGGTAACTATCGAC 57.332 45.455 11.73 0.00 37.61 4.20
17 18 5.303589 CCTTAACTCCCATGGTAACTATCGA 59.696 44.000 11.73 0.00 37.61 3.59
18 19 5.303589 TCCTTAACTCCCATGGTAACTATCG 59.696 44.000 11.73 0.00 37.61 2.92
19 20 6.099269 TGTCCTTAACTCCCATGGTAACTATC 59.901 42.308 11.73 0.00 37.61 2.08
20 21 5.968167 TGTCCTTAACTCCCATGGTAACTAT 59.032 40.000 11.73 0.00 37.61 2.12
21 22 5.343715 TGTCCTTAACTCCCATGGTAACTA 58.656 41.667 11.73 0.00 37.61 2.24
22 23 4.172807 TGTCCTTAACTCCCATGGTAACT 58.827 43.478 11.73 0.00 37.61 2.24
23 24 4.563140 TGTCCTTAACTCCCATGGTAAC 57.437 45.455 11.73 0.00 0.00 2.50
24 25 4.785914 TGATGTCCTTAACTCCCATGGTAA 59.214 41.667 11.73 1.58 0.00 2.85
25 26 4.367166 TGATGTCCTTAACTCCCATGGTA 58.633 43.478 11.73 0.00 0.00 3.25
26 27 3.189606 TGATGTCCTTAACTCCCATGGT 58.810 45.455 11.73 0.00 0.00 3.55
27 28 3.455910 TCTGATGTCCTTAACTCCCATGG 59.544 47.826 4.14 4.14 0.00 3.66
28 29 4.163078 ACTCTGATGTCCTTAACTCCCATG 59.837 45.833 0.00 0.00 0.00 3.66
29 30 4.366267 ACTCTGATGTCCTTAACTCCCAT 58.634 43.478 0.00 0.00 0.00 4.00
30 31 3.769844 GACTCTGATGTCCTTAACTCCCA 59.230 47.826 0.00 0.00 0.00 4.37
31 32 3.769844 TGACTCTGATGTCCTTAACTCCC 59.230 47.826 0.00 0.00 36.21 4.30
32 33 5.407407 TTGACTCTGATGTCCTTAACTCC 57.593 43.478 0.00 0.00 36.21 3.85
33 34 8.874816 GTTATTTGACTCTGATGTCCTTAACTC 58.125 37.037 0.00 0.00 36.21 3.01
34 35 8.375506 TGTTATTTGACTCTGATGTCCTTAACT 58.624 33.333 15.05 0.00 36.21 2.24
35 36 8.547967 TGTTATTTGACTCTGATGTCCTTAAC 57.452 34.615 0.00 0.00 36.21 2.01
36 37 9.567776 TTTGTTATTTGACTCTGATGTCCTTAA 57.432 29.630 0.00 0.00 36.21 1.85
37 38 9.219603 CTTTGTTATTTGACTCTGATGTCCTTA 57.780 33.333 0.00 0.00 36.21 2.69
38 39 7.721399 ACTTTGTTATTTGACTCTGATGTCCTT 59.279 33.333 0.00 0.00 36.21 3.36
39 40 7.227156 ACTTTGTTATTTGACTCTGATGTCCT 58.773 34.615 0.00 0.00 36.21 3.85
40 41 7.440523 ACTTTGTTATTTGACTCTGATGTCC 57.559 36.000 0.00 0.00 36.21 4.02
41 42 8.559536 TGAACTTTGTTATTTGACTCTGATGTC 58.440 33.333 0.00 0.00 37.47 3.06
42 43 8.450578 TGAACTTTGTTATTTGACTCTGATGT 57.549 30.769 0.00 0.00 0.00 3.06
43 44 9.173939 GTTGAACTTTGTTATTTGACTCTGATG 57.826 33.333 0.00 0.00 0.00 3.07
44 45 8.352942 GGTTGAACTTTGTTATTTGACTCTGAT 58.647 33.333 0.00 0.00 0.00 2.90
45 46 7.466725 CGGTTGAACTTTGTTATTTGACTCTGA 60.467 37.037 0.00 0.00 0.00 3.27
46 47 6.632834 CGGTTGAACTTTGTTATTTGACTCTG 59.367 38.462 0.00 0.00 0.00 3.35
47 48 6.317893 ACGGTTGAACTTTGTTATTTGACTCT 59.682 34.615 0.00 0.00 0.00 3.24
48 49 6.492254 ACGGTTGAACTTTGTTATTTGACTC 58.508 36.000 0.00 0.00 0.00 3.36
49 50 6.445357 ACGGTTGAACTTTGTTATTTGACT 57.555 33.333 0.00 0.00 0.00 3.41
50 51 6.358822 GCTACGGTTGAACTTTGTTATTTGAC 59.641 38.462 0.00 0.00 0.00 3.18
51 52 6.038382 TGCTACGGTTGAACTTTGTTATTTGA 59.962 34.615 0.00 0.00 0.00 2.69
52 53 6.202937 TGCTACGGTTGAACTTTGTTATTTG 58.797 36.000 0.00 0.00 0.00 2.32
53 54 6.380095 TGCTACGGTTGAACTTTGTTATTT 57.620 33.333 0.00 0.00 0.00 1.40
54 55 6.203647 GTTGCTACGGTTGAACTTTGTTATT 58.796 36.000 0.00 0.00 0.00 1.40
55 56 5.559417 CGTTGCTACGGTTGAACTTTGTTAT 60.559 40.000 13.04 0.00 43.94 1.89
56 57 4.260294 CGTTGCTACGGTTGAACTTTGTTA 60.260 41.667 13.04 0.00 43.94 2.41
57 58 3.486209 CGTTGCTACGGTTGAACTTTGTT 60.486 43.478 13.04 0.00 43.94 2.83
58 59 2.031191 CGTTGCTACGGTTGAACTTTGT 59.969 45.455 13.04 0.00 43.94 2.83
59 60 2.635444 CGTTGCTACGGTTGAACTTTG 58.365 47.619 13.04 0.00 43.94 2.77
71 72 2.195123 AAATGCCCGTGCGTTGCTAC 62.195 55.000 0.00 0.00 45.88 3.58
72 73 1.969064 AAATGCCCGTGCGTTGCTA 60.969 52.632 0.00 0.00 45.88 3.49
73 74 3.294493 AAATGCCCGTGCGTTGCT 61.294 55.556 0.00 0.00 45.88 3.91
74 75 3.105157 CAAATGCCCGTGCGTTGC 61.105 61.111 0.00 0.00 45.88 4.17
75 76 2.015627 CACAAATGCCCGTGCGTTG 61.016 57.895 0.00 1.29 45.88 4.10
83 84 7.943639 GTATTGTCAATACTAGCACAAATGCCC 60.944 40.741 23.04 0.00 44.95 5.36
84 85 6.912591 GTATTGTCAATACTAGCACAAATGCC 59.087 38.462 23.04 0.00 44.95 4.40
85 86 6.628856 CGTATTGTCAATACTAGCACAAATGC 59.371 38.462 25.86 3.49 45.18 3.56
86 87 7.635973 CACGTATTGTCAATACTAGCACAAATG 59.364 37.037 25.86 13.26 41.22 2.32
87 88 7.201609 CCACGTATTGTCAATACTAGCACAAAT 60.202 37.037 25.86 5.03 41.22 2.32
88 89 6.091577 CCACGTATTGTCAATACTAGCACAAA 59.908 38.462 25.86 0.00 41.22 2.83
89 90 5.579119 CCACGTATTGTCAATACTAGCACAA 59.421 40.000 25.86 2.73 41.22 3.33
90 91 5.105675 TCCACGTATTGTCAATACTAGCACA 60.106 40.000 25.86 8.65 41.22 4.57
91 92 5.231568 GTCCACGTATTGTCAATACTAGCAC 59.768 44.000 25.86 14.70 41.22 4.40
92 93 5.345702 GTCCACGTATTGTCAATACTAGCA 58.654 41.667 25.86 8.40 41.22 3.49
93 94 4.440103 CGTCCACGTATTGTCAATACTAGC 59.560 45.833 25.86 14.15 41.22 3.42
94 95 5.680229 GTCGTCCACGTATTGTCAATACTAG 59.320 44.000 25.86 19.25 41.22 2.57
95 96 5.572211 GTCGTCCACGTATTGTCAATACTA 58.428 41.667 25.86 11.43 41.22 1.82
96 97 4.418392 GTCGTCCACGTATTGTCAATACT 58.582 43.478 25.86 14.56 41.22 2.12
97 98 3.239026 CGTCGTCCACGTATTGTCAATAC 59.761 47.826 21.21 21.21 44.07 1.89
98 99 3.428163 CGTCGTCCACGTATTGTCAATA 58.572 45.455 0.89 0.89 44.07 1.90
110 111 0.942884 GGAACCTTCACGTCGTCCAC 60.943 60.000 0.00 0.00 0.00 4.02
144 1164 5.011840 TCCATGCATCATTTCCTTGTTGAAA 59.988 36.000 0.00 0.00 38.51 2.69
153 1173 4.142116 TGTCAATGTCCATGCATCATTTCC 60.142 41.667 8.88 4.61 30.74 3.13
158 1178 2.614983 CGATGTCAATGTCCATGCATCA 59.385 45.455 0.00 0.00 34.18 3.07
172 1192 3.033368 TGTTTGGATTCGACGATGTCA 57.967 42.857 0.00 0.00 32.09 3.58
176 1196 7.151976 TGACATATATGTTTGGATTCGACGAT 58.848 34.615 19.19 0.00 41.95 3.73
179 1199 7.946655 TCTGACATATATGTTTGGATTCGAC 57.053 36.000 19.19 3.73 41.95 4.20
180 1200 8.367156 TGATCTGACATATATGTTTGGATTCGA 58.633 33.333 19.19 7.90 41.95 3.71
197 1217 5.323581 TGGGTGAAAATTCATGATCTGACA 58.676 37.500 0.00 0.00 39.73 3.58
199 1219 5.818887 TCTGGGTGAAAATTCATGATCTGA 58.181 37.500 0.00 0.00 39.73 3.27
206 1226 6.554605 TCCTTTTCTTCTGGGTGAAAATTCAT 59.445 34.615 0.00 0.00 40.11 2.57
209 1229 5.070446 GGTCCTTTTCTTCTGGGTGAAAATT 59.930 40.000 0.00 0.00 40.11 1.82
233 1253 1.734047 GCACTGTCTGGAGCTTACTCG 60.734 57.143 0.00 0.00 44.48 4.18
265 1285 1.296727 GGCAGTGGCGGTTTATACTC 58.703 55.000 0.00 0.00 42.47 2.59
268 1288 0.107410 CCTGGCAGTGGCGGTTTATA 60.107 55.000 22.79 0.00 42.47 0.98
290 1310 2.233305 GGTCTGACCTTCTCTGGGTA 57.767 55.000 19.53 0.00 37.17 3.69
304 1324 2.491675 GGGTGAAAACCCTAGGTCTG 57.508 55.000 8.29 0.00 46.39 3.51
324 1344 3.593096 GAATACCGGGTCTCGAGTTTTT 58.407 45.455 13.13 0.00 42.43 1.94
325 1345 2.416431 CGAATACCGGGTCTCGAGTTTT 60.416 50.000 20.99 0.00 42.43 2.43
346 1366 1.471119 TCGTCTATGGTGGTGTCTCC 58.529 55.000 0.00 0.00 0.00 3.71
355 1376 6.071840 GCAATATAGAGGACTTCGTCTATGGT 60.072 42.308 22.95 13.40 46.97 3.55
391 1412 0.742281 CATGACTTCTCCACGGGCAG 60.742 60.000 0.00 0.00 0.00 4.85
396 1417 0.671472 TGCTGCATGACTTCTCCACG 60.671 55.000 0.00 0.00 0.00 4.94
411 1434 1.197721 GTGTTGTTCGGGAGATTGCTG 59.802 52.381 0.00 0.00 39.57 4.41
439 1462 3.000041 TGTAGTGTTCACATTGATCCGC 59.000 45.455 5.74 0.00 0.00 5.54
448 1471 6.878389 TCAGCAATTGATATGTAGTGTTCACA 59.122 34.615 10.34 0.00 0.00 3.58
449 1472 7.278646 TCTCAGCAATTGATATGTAGTGTTCAC 59.721 37.037 10.34 0.00 34.68 3.18
457 1480 5.901552 TGTCGTCTCAGCAATTGATATGTA 58.098 37.500 10.34 0.00 34.68 2.29
466 1489 4.158579 TGTTAGATCTGTCGTCTCAGCAAT 59.841 41.667 5.18 0.00 35.63 3.56
478 1501 4.389992 CGTTGTCTGCATTGTTAGATCTGT 59.610 41.667 5.18 0.00 0.00 3.41
480 1503 3.935203 CCGTTGTCTGCATTGTTAGATCT 59.065 43.478 0.00 0.00 0.00 2.75
486 1509 1.674359 TGACCGTTGTCTGCATTGTT 58.326 45.000 0.00 0.00 42.28 2.83
487 1510 1.536766 CATGACCGTTGTCTGCATTGT 59.463 47.619 0.00 0.00 42.28 2.71
488 1511 1.730121 GCATGACCGTTGTCTGCATTG 60.730 52.381 0.00 0.00 41.36 2.82
489 1512 0.523072 GCATGACCGTTGTCTGCATT 59.477 50.000 0.00 0.00 41.36 3.56
490 1513 0.606130 TGCATGACCGTTGTCTGCAT 60.606 50.000 0.00 0.00 43.86 3.96
491 1514 1.227793 TGCATGACCGTTGTCTGCA 60.228 52.632 0.00 12.51 45.15 4.41
492 1515 0.179181 CATGCATGACCGTTGTCTGC 60.179 55.000 22.59 8.96 42.28 4.26
493 1516 0.179181 GCATGCATGACCGTTGTCTG 60.179 55.000 30.64 0.46 42.28 3.51
494 1517 0.321919 AGCATGCATGACCGTTGTCT 60.322 50.000 30.64 11.85 42.28 3.41
501 1524 2.800629 GCAAATGGTAGCATGCATGACC 60.801 50.000 30.64 26.88 38.63 4.02
503 1526 1.065851 CGCAAATGGTAGCATGCATGA 59.934 47.619 30.64 9.30 38.69 3.07
504 1527 1.483316 CGCAAATGGTAGCATGCATG 58.517 50.000 22.70 22.70 38.69 4.06
505 1528 0.249155 GCGCAAATGGTAGCATGCAT 60.249 50.000 21.98 7.68 38.69 3.96
515 1538 1.448189 CCCACATTGGCGCAAATGG 60.448 57.895 34.61 23.09 41.06 3.16
518 1541 4.001226 GCCCCACATTGGCGCAAA 62.001 61.111 10.83 3.91 40.89 3.68
552 1583 0.668535 TGGATATCTGTCGTGCTCCG 59.331 55.000 2.05 0.00 38.13 4.63
554 1585 2.359214 TCACTGGATATCTGTCGTGCTC 59.641 50.000 2.05 0.00 0.00 4.26
559 1590 3.312697 TCGTCTTCACTGGATATCTGTCG 59.687 47.826 2.05 2.79 0.00 4.35
563 1594 4.023980 TGGTTCGTCTTCACTGGATATCT 58.976 43.478 2.05 0.00 0.00 1.98
637 1668 2.629656 GGTGGTGCTGCATGTGACC 61.630 63.158 5.27 6.12 0.00 4.02
665 1696 0.249238 TTTTGGTCCACGCATTGCAC 60.249 50.000 9.69 0.00 0.00 4.57
707 1738 6.202379 AGAGAAACTGAACATGATATGATGCG 59.798 38.462 0.00 0.00 0.00 4.73
781 1814 4.357918 AGCCACTCTTAATTGTGTGTCT 57.642 40.909 7.06 0.00 32.76 3.41
811 1848 7.540055 CAGCAGTAATCAAACAAGATCCTTTTC 59.460 37.037 0.00 0.00 0.00 2.29
812 1849 7.373493 CAGCAGTAATCAAACAAGATCCTTTT 58.627 34.615 0.00 0.00 0.00 2.27
816 1853 4.439289 GGCAGCAGTAATCAAACAAGATCC 60.439 45.833 0.00 0.00 0.00 3.36
844 1881 5.163258 GCAGGATAGGAAGGAGATCTTTCAA 60.163 44.000 8.94 0.00 35.50 2.69
871 1908 3.058016 GCAACAGTAATCAAGCAGAAGCA 60.058 43.478 0.00 0.00 45.49 3.91
872 1909 3.058016 TGCAACAGTAATCAAGCAGAAGC 60.058 43.478 0.00 0.00 42.56 3.86
873 1910 4.754372 TGCAACAGTAATCAAGCAGAAG 57.246 40.909 0.00 0.00 0.00 2.85
874 1911 5.463286 CAATGCAACAGTAATCAAGCAGAA 58.537 37.500 0.00 0.00 35.26 3.02
875 1912 4.616604 GCAATGCAACAGTAATCAAGCAGA 60.617 41.667 0.00 0.00 35.26 4.26
876 1913 3.611113 GCAATGCAACAGTAATCAAGCAG 59.389 43.478 0.00 0.00 35.26 4.24
1066 2140 3.326981 CAAGACGCACACGCACGA 61.327 61.111 0.00 0.00 45.53 4.35
1107 2181 0.594284 GTCTCGCGCTATACCACCAC 60.594 60.000 5.56 0.00 0.00 4.16
1345 2423 6.129009 GCAATGAATATGCAATCGAAATGGAC 60.129 38.462 0.00 0.00 43.29 4.02
1391 2486 6.980051 AACCGAAACCAGTATAATCAGAAC 57.020 37.500 0.00 0.00 0.00 3.01
1396 2491 8.658499 AGTATGAAACCGAAACCAGTATAATC 57.342 34.615 0.00 0.00 0.00 1.75
1399 2494 8.095792 TGAAAGTATGAAACCGAAACCAGTATA 58.904 33.333 0.00 0.00 0.00 1.47
1400 2495 6.938030 TGAAAGTATGAAACCGAAACCAGTAT 59.062 34.615 0.00 0.00 0.00 2.12
1402 2497 5.127491 TGAAAGTATGAAACCGAAACCAGT 58.873 37.500 0.00 0.00 0.00 4.00
1403 2498 5.682943 TGAAAGTATGAAACCGAAACCAG 57.317 39.130 0.00 0.00 0.00 4.00
1406 2501 7.981142 TGGATATGAAAGTATGAAACCGAAAC 58.019 34.615 0.00 0.00 0.00 2.78
1408 2503 7.990314 TGATGGATATGAAAGTATGAAACCGAA 59.010 33.333 0.00 0.00 0.00 4.30
1409 2504 7.505258 TGATGGATATGAAAGTATGAAACCGA 58.495 34.615 0.00 0.00 0.00 4.69
1410 2505 7.571983 GCTGATGGATATGAAAGTATGAAACCG 60.572 40.741 0.00 0.00 0.00 4.44
1411 2506 7.229306 TGCTGATGGATATGAAAGTATGAAACC 59.771 37.037 0.00 0.00 0.00 3.27
1413 2508 8.750515 TTGCTGATGGATATGAAAGTATGAAA 57.249 30.769 0.00 0.00 0.00 2.69
1415 2510 7.512130 ACTTGCTGATGGATATGAAAGTATGA 58.488 34.615 0.00 0.00 0.00 2.15
1416 2511 7.359849 CGACTTGCTGATGGATATGAAAGTATG 60.360 40.741 0.00 0.00 0.00 2.39
1417 2512 6.648310 CGACTTGCTGATGGATATGAAAGTAT 59.352 38.462 0.00 0.00 0.00 2.12
1418 2513 5.985530 CGACTTGCTGATGGATATGAAAGTA 59.014 40.000 0.00 0.00 0.00 2.24
1419 2514 4.813161 CGACTTGCTGATGGATATGAAAGT 59.187 41.667 0.00 0.00 0.00 2.66
1420 2515 5.052481 TCGACTTGCTGATGGATATGAAAG 58.948 41.667 0.00 0.00 0.00 2.62
1422 2517 4.502087 CCTCGACTTGCTGATGGATATGAA 60.502 45.833 0.00 0.00 0.00 2.57
1423 2518 3.006217 CCTCGACTTGCTGATGGATATGA 59.994 47.826 0.00 0.00 0.00 2.15
1424 2519 3.324117 CCTCGACTTGCTGATGGATATG 58.676 50.000 0.00 0.00 0.00 1.78
1425 2520 2.289320 GCCTCGACTTGCTGATGGATAT 60.289 50.000 0.00 0.00 0.00 1.63
1426 2521 1.069204 GCCTCGACTTGCTGATGGATA 59.931 52.381 0.00 0.00 0.00 2.59
1505 2600 8.874744 TGAGAAGATTTGATCAAGGAAAGAAT 57.125 30.769 8.41 0.00 0.00 2.40
1530 2628 4.152402 CGTCGTTGATTGGAAGATCAAACT 59.848 41.667 0.00 0.00 44.92 2.66
1550 2652 5.919141 GTGTACACTATATGATCCAACCGTC 59.081 44.000 18.92 0.00 0.00 4.79
1575 2677 1.027357 GCCACCATGCAAGATCGATT 58.973 50.000 0.00 0.00 0.00 3.34
1715 2847 4.500116 GAGGTGGAGCGACTCGGC 62.500 72.222 0.00 0.00 0.00 5.54
2020 3176 1.203313 ACCTGGAGGAAGCTGAAGGTA 60.203 52.381 0.00 0.00 36.28 3.08
2045 3201 4.498520 CACGCAGAGGCCGACGAT 62.499 66.667 15.02 0.00 36.38 3.73
2125 3287 6.347725 CGTTGCAAGTAATTCAGAAGCTTACT 60.348 38.462 0.00 4.05 37.31 2.24
2265 3485 2.668632 GACACCGGGATGAAGGCA 59.331 61.111 6.32 0.00 0.00 4.75
2307 3527 1.234821 GTTCATGCAGGACGGTGAAA 58.765 50.000 0.00 0.00 32.93 2.69
2362 3587 5.065988 GGGTAAACAGATACACGCATGAATT 59.934 40.000 0.00 0.00 0.00 2.17
2371 3596 3.616219 TGCCATGGGTAAACAGATACAC 58.384 45.455 15.13 0.00 0.00 2.90
2375 3600 3.668141 TCATGCCATGGGTAAACAGAT 57.332 42.857 15.13 0.00 0.00 2.90
2399 3634 5.063180 TGCAAAGCATAAGTTTCAGATGG 57.937 39.130 0.00 0.00 31.71 3.51
2469 3704 1.209019 ACAGCAGAAGATACAGGCCAG 59.791 52.381 5.01 0.00 0.00 4.85
2598 3839 2.169352 CACCGAATGGAGGATCTCTGTT 59.831 50.000 0.00 0.00 39.21 3.16
2615 3856 2.741517 TGCACATGTTAACAGATCACCG 59.258 45.455 14.65 0.00 0.00 4.94
2622 3863 4.548494 TGATTTGCTGCACATGTTAACAG 58.452 39.130 14.65 13.50 0.00 3.16
2643 3884 9.143631 GAACATGGAAAAATTATTGGAGAACTG 57.856 33.333 0.00 0.00 0.00 3.16
2689 3930 2.102578 AGCCTAATTTGCGCCAGAATT 58.897 42.857 4.18 11.48 0.00 2.17
2791 4043 7.383687 ACATATATATGTCCCCACAAACTACG 58.616 38.462 20.49 0.00 42.96 3.51
2833 4085 6.068010 CCCCAAAATTACATGTATAGCCAGA 58.932 40.000 6.36 0.00 0.00 3.86
2834 4086 5.243730 CCCCCAAAATTACATGTATAGCCAG 59.756 44.000 6.36 0.00 0.00 4.85
2835 4087 5.144100 CCCCCAAAATTACATGTATAGCCA 58.856 41.667 6.36 0.00 0.00 4.75
2836 4088 5.144832 ACCCCCAAAATTACATGTATAGCC 58.855 41.667 6.36 0.00 0.00 3.93
2837 4089 7.826918 TTACCCCCAAAATTACATGTATAGC 57.173 36.000 6.36 0.00 0.00 2.97
2854 4109 2.287977 AACAGCTGTCTTTTACCCCC 57.712 50.000 21.95 0.00 0.00 5.40
2884 4173 1.622607 TATCTCCCGTGGGCTGGTTG 61.623 60.000 0.00 0.00 34.68 3.77
2892 4181 2.037121 TGTATGCATGTATCTCCCGTGG 59.963 50.000 10.16 0.00 0.00 4.94
2898 4187 6.237781 GCGATCAAGATGTATGCATGTATCTC 60.238 42.308 20.87 11.92 35.07 2.75
2902 4191 4.448732 GTGCGATCAAGATGTATGCATGTA 59.551 41.667 10.16 0.00 35.07 2.29
2903 4192 3.249320 GTGCGATCAAGATGTATGCATGT 59.751 43.478 10.16 0.00 35.07 3.21
2904 4193 3.663493 CGTGCGATCAAGATGTATGCATG 60.663 47.826 10.16 0.00 35.07 4.06
2905 4194 2.477754 CGTGCGATCAAGATGTATGCAT 59.522 45.455 3.79 3.79 38.18 3.96
2907 4196 2.127251 TCGTGCGATCAAGATGTATGC 58.873 47.619 0.00 0.00 0.00 3.14
2938 4298 2.436417 ACACTTTCTGTTGCACTGTGT 58.564 42.857 9.86 0.00 33.15 3.72
2970 4330 7.348080 TGACGATGTCTACTAATTCTTGGAT 57.652 36.000 0.00 0.00 33.15 3.41
2988 4348 2.905075 TCCGAGCAATTGAATGACGAT 58.095 42.857 10.34 0.00 0.00 3.73
2991 4351 5.240713 AGAAATCCGAGCAATTGAATGAC 57.759 39.130 10.34 0.00 0.00 3.06
2992 4352 5.902613 AAGAAATCCGAGCAATTGAATGA 57.097 34.783 10.34 0.00 0.00 2.57
2998 4358 4.702131 AGCAAGTAAGAAATCCGAGCAATT 59.298 37.500 0.00 0.00 0.00 2.32
3017 4377 9.959721 AGAAATTAGTAGGATTACTTGAAGCAA 57.040 29.630 0.00 0.00 40.55 3.91
3063 4424 9.979578 ATTCAATAAATGCAAGTTGTACTGAAA 57.020 25.926 4.48 0.00 0.00 2.69
3168 4531 9.139174 CCACACAAAATTTCTAAAAATATCGCT 57.861 29.630 0.00 0.00 33.93 4.93
3169 4532 8.921670 ACCACACAAAATTTCTAAAAATATCGC 58.078 29.630 0.00 0.00 33.93 4.58
3174 4537 9.097257 CACTGACCACACAAAATTTCTAAAAAT 57.903 29.630 0.00 0.00 36.64 1.82
3175 4538 8.091449 ACACTGACCACACAAAATTTCTAAAAA 58.909 29.630 0.00 0.00 0.00 1.94
3176 4539 7.607250 ACACTGACCACACAAAATTTCTAAAA 58.393 30.769 0.00 0.00 0.00 1.52
3177 4540 7.164230 ACACTGACCACACAAAATTTCTAAA 57.836 32.000 0.00 0.00 0.00 1.85
3178 4541 6.767524 ACACTGACCACACAAAATTTCTAA 57.232 33.333 0.00 0.00 0.00 2.10
3179 4542 7.554835 ACTTACACTGACCACACAAAATTTCTA 59.445 33.333 0.00 0.00 0.00 2.10
3180 4543 6.377146 ACTTACACTGACCACACAAAATTTCT 59.623 34.615 0.00 0.00 0.00 2.52
3181 4544 6.560711 ACTTACACTGACCACACAAAATTTC 58.439 36.000 0.00 0.00 0.00 2.17
3182 4545 6.524101 ACTTACACTGACCACACAAAATTT 57.476 33.333 0.00 0.00 0.00 1.82
3183 4546 6.524101 AACTTACACTGACCACACAAAATT 57.476 33.333 0.00 0.00 0.00 1.82
3184 4547 7.500892 TGATAACTTACACTGACCACACAAAAT 59.499 33.333 0.00 0.00 0.00 1.82
3185 4548 6.824196 TGATAACTTACACTGACCACACAAAA 59.176 34.615 0.00 0.00 0.00 2.44
3186 4549 6.350103 TGATAACTTACACTGACCACACAAA 58.650 36.000 0.00 0.00 0.00 2.83
3187 4550 5.919755 TGATAACTTACACTGACCACACAA 58.080 37.500 0.00 0.00 0.00 3.33
3188 4551 5.538849 TGATAACTTACACTGACCACACA 57.461 39.130 0.00 0.00 0.00 3.72
3189 4552 5.932303 ACATGATAACTTACACTGACCACAC 59.068 40.000 0.00 0.00 0.00 3.82
3190 4553 5.931724 CACATGATAACTTACACTGACCACA 59.068 40.000 0.00 0.00 0.00 4.17
3191 4554 6.090898 GTCACATGATAACTTACACTGACCAC 59.909 42.308 0.00 0.00 0.00 4.16
3192 4555 6.014584 AGTCACATGATAACTTACACTGACCA 60.015 38.462 0.00 0.00 32.27 4.02
3193 4556 6.398918 AGTCACATGATAACTTACACTGACC 58.601 40.000 0.00 0.00 32.27 4.02
3194 4557 8.027189 TGTAGTCACATGATAACTTACACTGAC 58.973 37.037 0.00 0.00 32.15 3.51
3195 4558 8.117813 TGTAGTCACATGATAACTTACACTGA 57.882 34.615 0.00 0.00 0.00 3.41
3196 4559 8.757164 TTGTAGTCACATGATAACTTACACTG 57.243 34.615 0.00 0.00 33.76 3.66
3197 4560 9.944376 AATTGTAGTCACATGATAACTTACACT 57.056 29.630 0.00 0.00 33.76 3.55
3210 4573 9.684448 CGACATATCTTCTAATTGTAGTCACAT 57.316 33.333 0.00 0.00 33.76 3.21
3211 4574 8.683615 ACGACATATCTTCTAATTGTAGTCACA 58.316 33.333 0.00 0.00 0.00 3.58
3212 4575 8.959058 CACGACATATCTTCTAATTGTAGTCAC 58.041 37.037 0.00 0.00 0.00 3.67
3213 4576 8.899771 TCACGACATATCTTCTAATTGTAGTCA 58.100 33.333 0.00 0.00 0.00 3.41
3214 4577 9.900710 ATCACGACATATCTTCTAATTGTAGTC 57.099 33.333 0.00 0.00 0.00 2.59
3215 4578 9.684448 CATCACGACATATCTTCTAATTGTAGT 57.316 33.333 0.00 0.00 0.00 2.73
3216 4579 9.133627 CCATCACGACATATCTTCTAATTGTAG 57.866 37.037 0.00 0.00 0.00 2.74
3217 4580 8.638873 ACCATCACGACATATCTTCTAATTGTA 58.361 33.333 0.00 0.00 0.00 2.41
3218 4581 7.500992 ACCATCACGACATATCTTCTAATTGT 58.499 34.615 0.00 0.00 0.00 2.71
3219 4582 7.953158 ACCATCACGACATATCTTCTAATTG 57.047 36.000 0.00 0.00 0.00 2.32
3220 4583 7.041780 GCAACCATCACGACATATCTTCTAATT 60.042 37.037 0.00 0.00 0.00 1.40
3221 4584 6.425114 GCAACCATCACGACATATCTTCTAAT 59.575 38.462 0.00 0.00 0.00 1.73
3222 4585 5.753438 GCAACCATCACGACATATCTTCTAA 59.247 40.000 0.00 0.00 0.00 2.10
3223 4586 5.069119 AGCAACCATCACGACATATCTTCTA 59.931 40.000 0.00 0.00 0.00 2.10
3224 4587 4.122776 GCAACCATCACGACATATCTTCT 58.877 43.478 0.00 0.00 0.00 2.85
3225 4588 4.025396 CAGCAACCATCACGACATATCTTC 60.025 45.833 0.00 0.00 0.00 2.87
3226 4589 3.873361 CAGCAACCATCACGACATATCTT 59.127 43.478 0.00 0.00 0.00 2.40
3227 4590 3.132824 TCAGCAACCATCACGACATATCT 59.867 43.478 0.00 0.00 0.00 1.98
3228 4591 3.457234 TCAGCAACCATCACGACATATC 58.543 45.455 0.00 0.00 0.00 1.63
3229 4592 3.541996 TCAGCAACCATCACGACATAT 57.458 42.857 0.00 0.00 0.00 1.78
3230 4593 3.326836 TTCAGCAACCATCACGACATA 57.673 42.857 0.00 0.00 0.00 2.29
3231 4594 2.183478 TTCAGCAACCATCACGACAT 57.817 45.000 0.00 0.00 0.00 3.06
3232 4595 1.805943 CATTCAGCAACCATCACGACA 59.194 47.619 0.00 0.00 0.00 4.35
3233 4596 1.466360 GCATTCAGCAACCATCACGAC 60.466 52.381 0.00 0.00 44.79 4.34
3234 4597 0.804364 GCATTCAGCAACCATCACGA 59.196 50.000 0.00 0.00 44.79 4.35
3235 4598 3.317608 GCATTCAGCAACCATCACG 57.682 52.632 0.00 0.00 44.79 4.35
3245 4608 7.254319 CCACAATTCAAATCTATTGCATTCAGC 60.254 37.037 0.00 0.00 45.96 4.26
3246 4609 7.223971 CCCACAATTCAAATCTATTGCATTCAG 59.776 37.037 0.00 0.00 35.63 3.02
3247 4610 7.042950 CCCACAATTCAAATCTATTGCATTCA 58.957 34.615 0.00 0.00 35.63 2.57
3248 4611 7.043565 ACCCACAATTCAAATCTATTGCATTC 58.956 34.615 0.00 0.00 35.63 2.67
3249 4612 6.949715 ACCCACAATTCAAATCTATTGCATT 58.050 32.000 0.00 0.00 35.63 3.56
3250 4613 6.549433 ACCCACAATTCAAATCTATTGCAT 57.451 33.333 0.00 0.00 35.63 3.96
3251 4614 5.999205 ACCCACAATTCAAATCTATTGCA 57.001 34.783 0.00 0.00 35.63 4.08
3252 4615 7.671495 AAAACCCACAATTCAAATCTATTGC 57.329 32.000 0.00 0.00 35.63 3.56
3256 4619 9.936759 GGATTTAAAACCCACAATTCAAATCTA 57.063 29.630 3.13 0.00 33.65 1.98
3257 4620 8.659527 AGGATTTAAAACCCACAATTCAAATCT 58.340 29.630 10.67 0.00 33.65 2.40
3258 4621 8.846943 AGGATTTAAAACCCACAATTCAAATC 57.153 30.769 10.67 0.00 32.81 2.17
3261 4624 9.936759 GATAAGGATTTAAAACCCACAATTCAA 57.063 29.630 10.67 0.00 0.00 2.69
3262 4625 9.320295 AGATAAGGATTTAAAACCCACAATTCA 57.680 29.630 10.67 0.00 0.00 2.57
3265 4628 9.547279 AGAAGATAAGGATTTAAAACCCACAAT 57.453 29.630 10.67 0.57 0.00 2.71
3266 4629 8.950007 AGAAGATAAGGATTTAAAACCCACAA 57.050 30.769 10.67 0.00 0.00 3.33
3267 4630 8.390921 AGAGAAGATAAGGATTTAAAACCCACA 58.609 33.333 10.67 0.00 0.00 4.17
3268 4631 8.809468 AGAGAAGATAAGGATTTAAAACCCAC 57.191 34.615 10.67 1.42 0.00 4.61
3269 4632 8.836735 AGAGAGAAGATAAGGATTTAAAACCCA 58.163 33.333 10.67 0.40 0.00 4.51
3304 4667 9.763837 TGATTAATATCGGGAGAGGATAACTTA 57.236 33.333 0.00 0.00 45.48 2.24
3305 4668 8.666129 TGATTAATATCGGGAGAGGATAACTT 57.334 34.615 0.00 0.00 45.48 2.66
3306 4669 8.846423 ATGATTAATATCGGGAGAGGATAACT 57.154 34.615 0.00 0.00 45.48 2.24
3307 4670 8.696374 TGATGATTAATATCGGGAGAGGATAAC 58.304 37.037 0.00 0.00 45.48 1.89
3308 4671 8.838649 TGATGATTAATATCGGGAGAGGATAA 57.161 34.615 0.00 0.00 45.48 1.75
3310 4673 7.927683 ATGATGATTAATATCGGGAGAGGAT 57.072 36.000 0.00 0.00 45.48 3.24
3311 4674 7.014711 GCTATGATGATTAATATCGGGAGAGGA 59.985 40.741 0.00 0.00 45.48 3.71
3312 4675 7.015098 AGCTATGATGATTAATATCGGGAGAGG 59.985 40.741 0.00 0.00 45.48 3.69
3313 4676 7.950512 AGCTATGATGATTAATATCGGGAGAG 58.049 38.462 0.00 0.00 45.48 3.20
3314 4677 7.904558 AGCTATGATGATTAATATCGGGAGA 57.095 36.000 0.00 0.00 46.90 3.71
3353 4716 9.386122 CCATAGCCCCTTTGTATAGATATAGAT 57.614 37.037 0.00 0.00 0.00 1.98
3354 4717 7.789831 CCCATAGCCCCTTTGTATAGATATAGA 59.210 40.741 0.00 0.00 0.00 1.98
3355 4718 7.569111 ACCCATAGCCCCTTTGTATAGATATAG 59.431 40.741 0.00 0.00 0.00 1.31
3356 4719 7.347222 CACCCATAGCCCCTTTGTATAGATATA 59.653 40.741 0.00 0.00 0.00 0.86
3357 4720 6.158695 CACCCATAGCCCCTTTGTATAGATAT 59.841 42.308 0.00 0.00 0.00 1.63
3358 4721 5.487488 CACCCATAGCCCCTTTGTATAGATA 59.513 44.000 0.00 0.00 0.00 1.98
3359 4722 4.289672 CACCCATAGCCCCTTTGTATAGAT 59.710 45.833 0.00 0.00 0.00 1.98
3360 4723 3.650942 CACCCATAGCCCCTTTGTATAGA 59.349 47.826 0.00 0.00 0.00 1.98
3361 4724 3.650942 TCACCCATAGCCCCTTTGTATAG 59.349 47.826 0.00 0.00 0.00 1.31
3362 4725 3.671079 TCACCCATAGCCCCTTTGTATA 58.329 45.455 0.00 0.00 0.00 1.47
3363 4726 2.498441 TCACCCATAGCCCCTTTGTAT 58.502 47.619 0.00 0.00 0.00 2.29
3364 4727 1.974028 TCACCCATAGCCCCTTTGTA 58.026 50.000 0.00 0.00 0.00 2.41
3365 4728 1.080638 TTCACCCATAGCCCCTTTGT 58.919 50.000 0.00 0.00 0.00 2.83
3366 4729 1.474330 GTTCACCCATAGCCCCTTTG 58.526 55.000 0.00 0.00 0.00 2.77
3367 4730 0.335019 GGTTCACCCATAGCCCCTTT 59.665 55.000 0.00 0.00 0.00 3.11
3368 4731 0.849094 TGGTTCACCCATAGCCCCTT 60.849 55.000 0.00 0.00 38.72 3.95
3369 4732 0.849094 TTGGTTCACCCATAGCCCCT 60.849 55.000 0.00 0.00 44.74 4.79
3370 4733 0.683179 GTTGGTTCACCCATAGCCCC 60.683 60.000 0.00 0.00 44.74 5.80
3371 4734 0.683179 GGTTGGTTCACCCATAGCCC 60.683 60.000 0.00 0.00 44.74 5.19
3372 4735 0.331616 AGGTTGGTTCACCCATAGCC 59.668 55.000 0.00 0.00 44.74 3.93
3373 4736 1.271926 ACAGGTTGGTTCACCCATAGC 60.272 52.381 0.00 0.00 44.74 2.97
3374 4737 2.436417 CACAGGTTGGTTCACCCATAG 58.564 52.381 0.00 0.00 44.74 2.23
3375 4738 1.074727 CCACAGGTTGGTTCACCCATA 59.925 52.381 0.00 0.00 44.74 2.74
3376 4739 0.178964 CCACAGGTTGGTTCACCCAT 60.179 55.000 0.00 0.00 44.74 4.00
3377 4740 1.228793 CCACAGGTTGGTTCACCCA 59.771 57.895 0.00 0.00 41.10 4.51
3378 4741 4.174305 CCACAGGTTGGTTCACCC 57.826 61.111 0.00 0.00 41.10 4.61
3388 4751 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
3389 4752 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
3390 4753 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
3391 4754 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
3392 4755 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
3393 4756 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
3394 4757 2.197465 AGTCCCTCTAACCATCCAACC 58.803 52.381 0.00 0.00 0.00 3.77
3395 4758 4.202367 CCATAGTCCCTCTAACCATCCAAC 60.202 50.000 0.00 0.00 31.94 3.77
3396 4759 3.973973 CCATAGTCCCTCTAACCATCCAA 59.026 47.826 0.00 0.00 31.94 3.53
3397 4760 3.051341 ACCATAGTCCCTCTAACCATCCA 60.051 47.826 0.00 0.00 31.94 3.41
3398 4761 3.588569 ACCATAGTCCCTCTAACCATCC 58.411 50.000 0.00 0.00 31.94 3.51
3399 4762 5.422650 GGATACCATAGTCCCTCTAACCATC 59.577 48.000 0.00 0.00 31.94 3.51
3400 4763 5.342866 GGATACCATAGTCCCTCTAACCAT 58.657 45.833 0.00 0.00 31.94 3.55
3401 4764 4.748701 GGATACCATAGTCCCTCTAACCA 58.251 47.826 0.00 0.00 31.94 3.67
3418 4781 2.155065 CCTGATGGGGTGGGGATAC 58.845 63.158 0.00 0.00 0.00 2.24
3419 4782 4.769920 CCTGATGGGGTGGGGATA 57.230 61.111 0.00 0.00 0.00 2.59
3434 4797 2.681976 CGAGCATCAGGATTTGAACCCT 60.682 50.000 0.00 0.00 39.77 4.34
3435 4798 1.672881 CGAGCATCAGGATTTGAACCC 59.327 52.381 0.00 0.00 39.77 4.11
3436 4799 1.064654 GCGAGCATCAGGATTTGAACC 59.935 52.381 0.00 0.00 39.77 3.62
3437 4800 1.739466 TGCGAGCATCAGGATTTGAAC 59.261 47.619 0.00 0.00 39.77 3.18
3438 4801 2.112380 TGCGAGCATCAGGATTTGAA 57.888 45.000 0.00 0.00 39.77 2.69
3439 4802 2.336945 ATGCGAGCATCAGGATTTGA 57.663 45.000 4.52 0.00 40.85 2.69
3440 4803 3.431922 AAATGCGAGCATCAGGATTTG 57.568 42.857 11.26 0.00 37.87 2.32
3441 4804 5.278660 GGAATAAATGCGAGCATCAGGATTT 60.279 40.000 11.26 4.40 40.41 2.17
3442 4805 4.217118 GGAATAAATGCGAGCATCAGGATT 59.783 41.667 11.26 8.31 35.31 3.01
3443 4806 3.755378 GGAATAAATGCGAGCATCAGGAT 59.245 43.478 11.26 0.39 35.31 3.24
3444 4807 3.141398 GGAATAAATGCGAGCATCAGGA 58.859 45.455 11.26 0.00 35.31 3.86
3445 4808 3.144506 AGGAATAAATGCGAGCATCAGG 58.855 45.455 11.26 0.00 35.31 3.86
3446 4809 7.783090 ATATAGGAATAAATGCGAGCATCAG 57.217 36.000 11.26 0.00 35.31 2.90
3447 4810 8.565896 AAATATAGGAATAAATGCGAGCATCA 57.434 30.769 11.26 3.11 35.31 3.07
3477 4840 2.809446 TGCGTATCGTCAGAAATCCTG 58.191 47.619 0.00 0.00 44.27 3.86
3478 4841 3.735237 ATGCGTATCGTCAGAAATCCT 57.265 42.857 0.00 0.00 0.00 3.24
3479 4842 4.795970 AAATGCGTATCGTCAGAAATCC 57.204 40.909 0.00 0.00 0.00 3.01
3480 4843 6.792250 CCATTAAATGCGTATCGTCAGAAATC 59.208 38.462 0.00 0.00 0.00 2.17
3481 4844 6.293407 CCCATTAAATGCGTATCGTCAGAAAT 60.293 38.462 0.00 0.00 0.00 2.17
3482 4845 5.007234 CCCATTAAATGCGTATCGTCAGAAA 59.993 40.000 0.00 0.00 0.00 2.52
3483 4846 4.509970 CCCATTAAATGCGTATCGTCAGAA 59.490 41.667 0.00 0.00 0.00 3.02
3484 4847 4.055360 CCCATTAAATGCGTATCGTCAGA 58.945 43.478 0.00 0.00 0.00 3.27
3485 4848 4.055360 TCCCATTAAATGCGTATCGTCAG 58.945 43.478 0.00 0.00 0.00 3.51
3486 4849 4.055360 CTCCCATTAAATGCGTATCGTCA 58.945 43.478 0.00 0.00 0.00 4.35
3487 4850 4.304110 TCTCCCATTAAATGCGTATCGTC 58.696 43.478 0.00 0.00 0.00 4.20
3488 4851 4.330944 TCTCCCATTAAATGCGTATCGT 57.669 40.909 0.00 0.00 0.00 3.73
3489 4852 4.988540 TCTTCTCCCATTAAATGCGTATCG 59.011 41.667 0.00 0.00 0.00 2.92
3490 4853 5.107453 CGTCTTCTCCCATTAAATGCGTATC 60.107 44.000 0.00 0.00 0.00 2.24
3491 4854 4.750098 CGTCTTCTCCCATTAAATGCGTAT 59.250 41.667 0.00 0.00 0.00 3.06
3492 4855 4.116961 CGTCTTCTCCCATTAAATGCGTA 58.883 43.478 0.00 0.00 0.00 4.42
3493 4856 2.936498 CGTCTTCTCCCATTAAATGCGT 59.064 45.455 0.00 0.00 0.00 5.24
3494 4857 2.936498 ACGTCTTCTCCCATTAAATGCG 59.064 45.455 0.00 0.00 0.00 4.73
3495 4858 4.201920 GGAACGTCTTCTCCCATTAAATGC 60.202 45.833 0.00 0.00 0.00 3.56
3496 4859 5.485662 GGAACGTCTTCTCCCATTAAATG 57.514 43.478 0.00 0.00 0.00 2.32
3520 4883 0.731855 GTAGGTGCCTCGTTGTCGAC 60.732 60.000 9.11 9.11 41.35 4.20
3521 4884 1.582968 GTAGGTGCCTCGTTGTCGA 59.417 57.895 0.00 0.00 44.12 4.20
3522 4885 1.800315 CGTAGGTGCCTCGTTGTCG 60.800 63.158 0.00 0.00 38.55 4.35
3523 4886 4.164252 CGTAGGTGCCTCGTTGTC 57.836 61.111 0.00 0.00 0.00 3.18
3536 4899 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
3537 4900 5.156355 GTTGAGATTTACGAAGTCACCGTA 58.844 41.667 0.00 0.00 43.93 4.02
3538 4901 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
3539 4902 3.985279 TGTTGAGATTTACGAAGTCACCG 59.015 43.478 0.00 0.00 43.93 4.94
3540 4903 5.637810 TCATGTTGAGATTTACGAAGTCACC 59.362 40.000 0.00 0.00 43.93 4.02
3541 4904 6.706055 TCATGTTGAGATTTACGAAGTCAC 57.294 37.500 0.00 0.00 43.93 3.67
3542 4905 9.034544 CATATCATGTTGAGATTTACGAAGTCA 57.965 33.333 0.00 0.00 43.93 3.41
3543 4906 8.006590 GCATATCATGTTGAGATTTACGAAGTC 58.993 37.037 0.00 0.00 43.93 3.01
3545 4908 8.008279 CAGCATATCATGTTGAGATTTACGAAG 58.992 37.037 0.00 0.00 43.17 3.79
3546 4909 7.041848 CCAGCATATCATGTTGAGATTTACGAA 60.042 37.037 4.76 0.00 43.17 3.85
3547 4910 6.424812 CCAGCATATCATGTTGAGATTTACGA 59.575 38.462 4.76 0.00 43.17 3.43
3548 4911 6.596703 CCAGCATATCATGTTGAGATTTACG 58.403 40.000 4.76 0.00 43.17 3.18
3549 4912 6.206243 AGCCAGCATATCATGTTGAGATTTAC 59.794 38.462 4.76 0.00 43.17 2.01
3550 4913 6.301486 AGCCAGCATATCATGTTGAGATTTA 58.699 36.000 4.76 0.00 43.17 1.40
3551 4914 5.138276 AGCCAGCATATCATGTTGAGATTT 58.862 37.500 4.76 0.00 43.17 2.17
3552 4915 4.726583 AGCCAGCATATCATGTTGAGATT 58.273 39.130 4.76 0.00 43.17 2.40
3553 4916 4.202430 TGAGCCAGCATATCATGTTGAGAT 60.202 41.667 4.76 0.00 43.17 2.75
3554 4917 3.135167 TGAGCCAGCATATCATGTTGAGA 59.865 43.478 4.76 0.00 43.17 3.27
3555 4918 3.473625 TGAGCCAGCATATCATGTTGAG 58.526 45.455 4.76 0.00 43.17 3.02
3556 4919 3.118149 ACTGAGCCAGCATATCATGTTGA 60.118 43.478 4.76 0.00 43.17 3.18
3557 4920 3.211865 ACTGAGCCAGCATATCATGTTG 58.788 45.455 2.50 0.00 40.63 3.33
3558 4921 3.136077 AGACTGAGCCAGCATATCATGTT 59.864 43.478 2.50 0.00 34.37 2.71
3559 4922 2.704596 AGACTGAGCCAGCATATCATGT 59.295 45.455 2.50 0.00 34.37 3.21
3560 4923 3.404224 AGACTGAGCCAGCATATCATG 57.596 47.619 2.50 0.00 34.37 3.07
3561 4924 4.141551 TGAAAGACTGAGCCAGCATATCAT 60.142 41.667 2.50 0.00 34.37 2.45
3562 4925 3.198417 TGAAAGACTGAGCCAGCATATCA 59.802 43.478 2.50 1.36 34.37 2.15
3563 4926 3.801698 TGAAAGACTGAGCCAGCATATC 58.198 45.455 2.50 0.00 34.37 1.63
3564 4927 3.920231 TGAAAGACTGAGCCAGCATAT 57.080 42.857 2.50 0.00 34.37 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.