Multiple sequence alignment - TraesCS7A01G086700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G086700 chr7A 100.000 2446 0 0 1 2446 50632759 50635204 0.000000e+00 4518.0
1 TraesCS7A01G086700 chrUn 89.506 2087 125 34 1 2048 49452228 49454259 0.000000e+00 2555.0
2 TraesCS7A01G086700 chrUn 89.835 1702 101 35 385 2048 49485202 49486869 0.000000e+00 2119.0
3 TraesCS7A01G086700 chrUn 85.714 406 29 15 1636 2012 478115711 478116116 3.790000e-108 401.0
4 TraesCS7A01G086700 chr7D 94.379 1619 49 22 338 1922 48256881 48258491 0.000000e+00 2447.0
5 TraesCS7A01G086700 chr7D 91.049 1620 83 33 491 2051 48166324 48167940 0.000000e+00 2132.0
6 TraesCS7A01G086700 chr7D 90.999 1622 80 36 491 2051 48173311 48174927 0.000000e+00 2126.0
7 TraesCS7A01G086700 chr7D 90.926 1620 82 29 491 2050 48209334 48210948 0.000000e+00 2117.0
8 TraesCS7A01G086700 chr7D 90.802 1620 86 35 491 2052 48127371 48128985 0.000000e+00 2108.0
9 TraesCS7A01G086700 chr7D 81.738 679 103 11 790 1454 47516217 47516888 4.600000e-152 547.0
10 TraesCS7A01G086700 chr7D 91.000 400 29 5 2050 2446 263808564 263808169 1.290000e-147 532.0
11 TraesCS7A01G086700 chr7D 88.824 340 24 4 1 340 48255155 48255480 2.930000e-109 405.0
12 TraesCS7A01G086700 chr4A 91.651 1090 46 12 995 2052 663211687 663212763 0.000000e+00 1467.0
13 TraesCS7A01G086700 chr4A 93.203 971 63 2 1 968 663210717 663211687 0.000000e+00 1424.0
14 TraesCS7A01G086700 chr4A 87.919 149 9 6 512 653 663210375 663210521 1.500000e-37 167.0
15 TraesCS7A01G086700 chr1D 91.960 398 27 4 2047 2442 121231244 121230850 9.880000e-154 553.0
16 TraesCS7A01G086700 chr1D 90.727 399 33 3 2048 2446 198046191 198045797 1.670000e-146 529.0
17 TraesCS7A01G086700 chr4D 91.436 397 30 3 2051 2446 253782872 253782479 2.140000e-150 542.0
18 TraesCS7A01G086700 chr5A 91.392 395 32 1 2052 2446 430645943 430646335 7.690000e-150 540.0
19 TraesCS7A01G086700 chr5A 90.977 399 31 4 2050 2446 660737689 660738084 1.290000e-147 532.0
20 TraesCS7A01G086700 chr5A 91.282 390 30 2 2057 2446 588453627 588453242 1.670000e-146 529.0
21 TraesCS7A01G086700 chr3A 91.206 398 33 1 2049 2446 443784040 443783645 7.690000e-150 540.0
22 TraesCS7A01G086700 chr5D 91.184 397 31 2 2052 2446 318862786 318862392 9.950000e-149 536.0
23 TraesCS7A01G086700 chr1A 90.385 52 4 1 748 798 44713982 44714033 1.570000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G086700 chr7A 50632759 50635204 2445 False 4518.000000 4518 100.000000 1 2446 1 chr7A.!!$F1 2445
1 TraesCS7A01G086700 chrUn 49452228 49454259 2031 False 2555.000000 2555 89.506000 1 2048 1 chrUn.!!$F1 2047
2 TraesCS7A01G086700 chrUn 49485202 49486869 1667 False 2119.000000 2119 89.835000 385 2048 1 chrUn.!!$F2 1663
3 TraesCS7A01G086700 chr7D 48166324 48167940 1616 False 2132.000000 2132 91.049000 491 2051 1 chr7D.!!$F3 1560
4 TraesCS7A01G086700 chr7D 48173311 48174927 1616 False 2126.000000 2126 90.999000 491 2051 1 chr7D.!!$F4 1560
5 TraesCS7A01G086700 chr7D 48209334 48210948 1614 False 2117.000000 2117 90.926000 491 2050 1 chr7D.!!$F5 1559
6 TraesCS7A01G086700 chr7D 48127371 48128985 1614 False 2108.000000 2108 90.802000 491 2052 1 chr7D.!!$F2 1561
7 TraesCS7A01G086700 chr7D 48255155 48258491 3336 False 1426.000000 2447 91.601500 1 1922 2 chr7D.!!$F6 1921
8 TraesCS7A01G086700 chr7D 47516217 47516888 671 False 547.000000 547 81.738000 790 1454 1 chr7D.!!$F1 664
9 TraesCS7A01G086700 chr4A 663210375 663212763 2388 False 1019.333333 1467 90.924333 1 2052 3 chr4A.!!$F1 2051

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
435 2183 0.320421 CTTGGTACAGGGACACGTGG 60.32 60.0 21.57 3.64 42.39 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2371 4276 0.029035 ATCGTCGTAGTGCTTAGGCG 59.971 55.0 0.0 0.0 42.25 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 420 2.375766 GGCTGCTGTTCGACTGACG 61.376 63.158 0.00 0.00 44.09 4.35
125 468 2.907696 TGACCAGATAAAAGGGGTTCGA 59.092 45.455 0.00 0.00 32.77 3.71
236 579 3.202906 GCATGGCTTTATGAACTCGGTA 58.797 45.455 0.00 0.00 0.00 4.02
237 580 3.815401 GCATGGCTTTATGAACTCGGTAT 59.185 43.478 0.00 0.00 0.00 2.73
275 618 3.357166 GCTGCTGTAGCGTAATCTACT 57.643 47.619 1.07 0.00 43.63 2.57
288 631 5.407995 GCGTAATCTACTACAGTACGGAGAT 59.592 44.000 0.00 0.00 38.33 2.75
345 2091 2.093658 GTCCGCACCCTGATAAGAAGAA 60.094 50.000 0.00 0.00 0.00 2.52
420 2168 2.503356 AGAGGTTGGCATAGAGACTTGG 59.497 50.000 0.00 0.00 0.00 3.61
435 2183 0.320421 CTTGGTACAGGGACACGTGG 60.320 60.000 21.57 3.64 42.39 4.94
462 2210 7.886629 AATAGAGAGATGGAGAGAGATATGC 57.113 40.000 0.00 0.00 0.00 3.14
518 2266 6.765512 AGAATTAAAGCTGACCTTGATAGAGC 59.234 38.462 0.00 0.00 33.01 4.09
520 2268 0.749649 AGCTGACCTTGATAGAGCGG 59.250 55.000 0.00 0.00 34.75 5.52
726 2477 1.001815 CTTGACCCGCAAAATCAACGT 60.002 47.619 0.00 0.00 35.74 3.99
823 2575 8.296799 TGTGCAAAAATCTCACATTAATGAAC 57.703 30.769 22.16 0.00 35.99 3.18
824 2576 7.924947 TGTGCAAAAATCTCACATTAATGAACA 59.075 29.630 22.16 4.29 35.99 3.18
825 2577 8.928733 GTGCAAAAATCTCACATTAATGAACAT 58.071 29.630 22.16 5.47 0.00 2.71
926 2710 2.094659 CGTCCGTGTCTGCCACATC 61.095 63.158 0.00 0.00 44.78 3.06
934 2718 0.901124 GTCTGCCACATCTGGAGTCT 59.099 55.000 0.00 0.00 40.55 3.24
1846 3734 3.120041 ACAAATGGTGCGCAAACTAAAC 58.880 40.909 14.00 0.00 0.00 2.01
1847 3735 3.119291 CAAATGGTGCGCAAACTAAACA 58.881 40.909 14.00 0.00 0.00 2.83
1891 3779 6.930731 AGATTTAGTCAGGACTCTTTCAGAC 58.069 40.000 5.00 0.00 42.54 3.51
1927 3815 3.446799 TGCAAGAAAACAACATGCAGAC 58.553 40.909 0.00 0.00 41.67 3.51
1948 3836 9.338291 GCAGACACAATTTTATATCATAGCATG 57.662 33.333 0.00 0.00 0.00 4.06
2059 3964 9.297703 TCTATCTATCTATCTATCTGTTGGGGA 57.702 37.037 0.00 0.00 0.00 4.81
2060 3965 9.928618 CTATCTATCTATCTATCTGTTGGGGAA 57.071 37.037 0.00 0.00 0.00 3.97
2061 3966 8.602472 ATCTATCTATCTATCTGTTGGGGAAC 57.398 38.462 0.00 0.00 0.00 3.62
2062 3967 7.535738 TCTATCTATCTATCTGTTGGGGAACA 58.464 38.462 0.00 0.00 0.00 3.18
2063 3968 5.871396 TCTATCTATCTGTTGGGGAACAC 57.129 43.478 0.00 0.00 0.00 3.32
2064 3969 5.277250 TCTATCTATCTGTTGGGGAACACA 58.723 41.667 0.00 0.00 0.00 3.72
2065 3970 4.927267 ATCTATCTGTTGGGGAACACAA 57.073 40.909 0.00 0.00 0.00 3.33
2066 3971 4.927267 TCTATCTGTTGGGGAACACAAT 57.073 40.909 0.00 0.00 0.00 2.71
2067 3972 6.575244 ATCTATCTGTTGGGGAACACAATA 57.425 37.500 0.00 0.00 0.00 1.90
2068 3973 6.575244 TCTATCTGTTGGGGAACACAATAT 57.425 37.500 0.00 0.00 0.00 1.28
2069 3974 6.969043 TCTATCTGTTGGGGAACACAATATT 58.031 36.000 0.00 0.00 0.00 1.28
2070 3975 7.410174 TCTATCTGTTGGGGAACACAATATTT 58.590 34.615 0.00 0.00 0.00 1.40
2071 3976 5.975693 TCTGTTGGGGAACACAATATTTC 57.024 39.130 0.00 0.00 0.00 2.17
2072 3977 5.389520 TCTGTTGGGGAACACAATATTTCA 58.610 37.500 0.00 0.00 0.00 2.69
2073 3978 5.835819 TCTGTTGGGGAACACAATATTTCAA 59.164 36.000 0.00 0.00 0.00 2.69
2074 3979 6.325028 TCTGTTGGGGAACACAATATTTCAAA 59.675 34.615 0.00 0.00 0.00 2.69
2075 3980 6.889198 TGTTGGGGAACACAATATTTCAAAA 58.111 32.000 0.00 0.00 0.00 2.44
2076 3981 7.338710 TGTTGGGGAACACAATATTTCAAAAA 58.661 30.769 0.00 0.00 0.00 1.94
2096 4001 5.796350 AAAAATTCCTACGATCACGGAAG 57.204 39.130 11.53 0.00 44.46 3.46
2097 4002 4.730949 AAATTCCTACGATCACGGAAGA 57.269 40.909 11.53 0.00 44.46 2.87
2098 4003 4.939052 AATTCCTACGATCACGGAAGAT 57.061 40.909 11.53 3.17 44.46 2.40
2099 4004 3.984508 TTCCTACGATCACGGAAGATC 57.015 47.619 0.00 5.11 44.46 2.75
2100 4005 3.210232 TCCTACGATCACGGAAGATCT 57.790 47.619 11.33 0.00 41.74 2.75
2101 4006 4.347360 TCCTACGATCACGGAAGATCTA 57.653 45.455 0.00 4.59 41.74 1.98
2102 4007 4.907809 TCCTACGATCACGGAAGATCTAT 58.092 43.478 0.00 0.00 41.74 1.98
2103 4008 4.936411 TCCTACGATCACGGAAGATCTATC 59.064 45.833 0.00 0.00 41.74 2.08
2104 4009 4.938832 CCTACGATCACGGAAGATCTATCT 59.061 45.833 0.00 0.00 41.74 1.98
2105 4010 5.413213 CCTACGATCACGGAAGATCTATCTT 59.587 44.000 4.90 4.90 44.85 2.40
2106 4011 5.114785 ACGATCACGGAAGATCTATCTTG 57.885 43.478 9.88 0.00 43.58 3.02
2107 4012 4.022762 ACGATCACGGAAGATCTATCTTGG 60.023 45.833 9.88 4.75 43.58 3.61
2108 4013 4.216472 CGATCACGGAAGATCTATCTTGGA 59.784 45.833 9.88 3.46 46.47 3.53
2109 4014 5.278512 CGATCACGGAAGATCTATCTTGGAA 60.279 44.000 9.88 0.00 46.47 3.53
2110 4015 5.932619 TCACGGAAGATCTATCTTGGAAA 57.067 39.130 9.88 0.00 46.47 3.13
2111 4016 6.485830 TCACGGAAGATCTATCTTGGAAAT 57.514 37.500 9.88 0.00 46.47 2.17
2112 4017 6.283694 TCACGGAAGATCTATCTTGGAAATG 58.716 40.000 9.88 2.46 46.47 2.32
2113 4018 5.049818 CACGGAAGATCTATCTTGGAAATGC 60.050 44.000 9.88 0.00 46.47 3.56
2114 4019 5.059161 CGGAAGATCTATCTTGGAAATGCA 58.941 41.667 9.88 0.00 46.47 3.96
2115 4020 5.704515 CGGAAGATCTATCTTGGAAATGCAT 59.295 40.000 9.88 0.00 46.47 3.96
2116 4021 6.875726 CGGAAGATCTATCTTGGAAATGCATA 59.124 38.462 9.88 0.00 46.47 3.14
2117 4022 7.064371 CGGAAGATCTATCTTGGAAATGCATAG 59.936 40.741 9.88 0.00 46.47 2.23
2118 4023 7.148272 GGAAGATCTATCTTGGAAATGCATAGC 60.148 40.741 9.88 0.00 46.47 2.97
2119 4024 6.776744 AGATCTATCTTGGAAATGCATAGCA 58.223 36.000 0.00 0.00 37.01 3.49
2120 4025 7.229308 AGATCTATCTTGGAAATGCATAGCAA 58.771 34.615 0.00 0.00 36.41 3.91
2121 4026 7.889073 AGATCTATCTTGGAAATGCATAGCAAT 59.111 33.333 0.00 0.00 36.41 3.56
2122 4027 7.210718 TCTATCTTGGAAATGCATAGCAATG 57.789 36.000 0.00 0.00 43.62 2.82
2123 4028 6.999871 TCTATCTTGGAAATGCATAGCAATGA 59.000 34.615 0.00 0.00 43.62 2.57
2124 4029 5.509716 TCTTGGAAATGCATAGCAATGAG 57.490 39.130 0.00 0.00 43.62 2.90
2125 4030 5.195185 TCTTGGAAATGCATAGCAATGAGA 58.805 37.500 0.00 0.00 43.62 3.27
2126 4031 5.298527 TCTTGGAAATGCATAGCAATGAGAG 59.701 40.000 0.00 0.00 43.62 3.20
2127 4032 3.887110 TGGAAATGCATAGCAATGAGAGG 59.113 43.478 0.00 0.00 43.62 3.69
2128 4033 3.255149 GGAAATGCATAGCAATGAGAGGG 59.745 47.826 0.00 0.00 43.62 4.30
2129 4034 2.581216 ATGCATAGCAATGAGAGGGG 57.419 50.000 0.00 0.00 43.62 4.79
2130 4035 1.510492 TGCATAGCAATGAGAGGGGA 58.490 50.000 0.00 0.00 34.76 4.81
2131 4036 1.419012 TGCATAGCAATGAGAGGGGAG 59.581 52.381 0.00 0.00 34.76 4.30
2132 4037 1.696336 GCATAGCAATGAGAGGGGAGA 59.304 52.381 0.00 0.00 34.84 3.71
2133 4038 2.289569 GCATAGCAATGAGAGGGGAGAG 60.290 54.545 0.00 0.00 34.84 3.20
2134 4039 2.856760 TAGCAATGAGAGGGGAGAGT 57.143 50.000 0.00 0.00 0.00 3.24
2135 4040 1.202330 AGCAATGAGAGGGGAGAGTG 58.798 55.000 0.00 0.00 0.00 3.51
2136 4041 0.908198 GCAATGAGAGGGGAGAGTGT 59.092 55.000 0.00 0.00 0.00 3.55
2137 4042 1.406614 GCAATGAGAGGGGAGAGTGTG 60.407 57.143 0.00 0.00 0.00 3.82
2138 4043 1.905215 CAATGAGAGGGGAGAGTGTGT 59.095 52.381 0.00 0.00 0.00 3.72
2139 4044 1.859302 ATGAGAGGGGAGAGTGTGTC 58.141 55.000 0.00 0.00 0.00 3.67
2140 4045 0.780637 TGAGAGGGGAGAGTGTGTCT 59.219 55.000 0.00 0.00 38.71 3.41
2141 4046 1.993301 TGAGAGGGGAGAGTGTGTCTA 59.007 52.381 0.00 0.00 34.71 2.59
2142 4047 2.291024 TGAGAGGGGAGAGTGTGTCTAC 60.291 54.545 0.00 0.00 34.71 2.59
2143 4048 1.096416 GAGGGGAGAGTGTGTCTACG 58.904 60.000 0.00 0.00 36.91 3.51
2144 4049 0.404812 AGGGGAGAGTGTGTCTACGT 59.595 55.000 0.00 0.00 36.91 3.57
2145 4050 0.526662 GGGGAGAGTGTGTCTACGTG 59.473 60.000 0.00 0.00 36.91 4.49
2146 4051 1.245732 GGGAGAGTGTGTCTACGTGT 58.754 55.000 0.00 0.00 36.91 4.49
2147 4052 2.430465 GGGAGAGTGTGTCTACGTGTA 58.570 52.381 0.00 0.00 36.91 2.90
2148 4053 2.161211 GGGAGAGTGTGTCTACGTGTAC 59.839 54.545 0.00 0.00 36.91 2.90
2149 4054 2.161211 GGAGAGTGTGTCTACGTGTACC 59.839 54.545 0.00 0.00 34.71 3.34
2150 4055 2.157738 AGAGTGTGTCTACGTGTACCC 58.842 52.381 0.00 0.00 31.71 3.69
2151 4056 2.157738 GAGTGTGTCTACGTGTACCCT 58.842 52.381 0.00 0.00 0.00 4.34
2152 4057 2.157738 AGTGTGTCTACGTGTACCCTC 58.842 52.381 0.00 0.00 0.00 4.30
2153 4058 1.135859 GTGTGTCTACGTGTACCCTCG 60.136 57.143 0.00 0.00 0.00 4.63
2154 4059 1.160137 GTGTCTACGTGTACCCTCGT 58.840 55.000 0.00 11.31 42.75 4.18
2155 4060 2.289382 TGTGTCTACGTGTACCCTCGTA 60.289 50.000 0.00 12.12 40.81 3.43
2159 4064 2.024176 TACGTGTACCCTCGTAGACC 57.976 55.000 0.00 0.00 40.81 3.85
2160 4065 1.021390 ACGTGTACCCTCGTAGACCG 61.021 60.000 6.16 0.00 38.87 4.79
2161 4066 0.740868 CGTGTACCCTCGTAGACCGA 60.741 60.000 0.00 0.00 45.00 4.69
2162 4067 1.453155 GTGTACCCTCGTAGACCGAA 58.547 55.000 0.00 0.00 46.75 4.30
2163 4068 1.812571 GTGTACCCTCGTAGACCGAAA 59.187 52.381 0.00 0.00 46.75 3.46
2164 4069 2.086869 TGTACCCTCGTAGACCGAAAG 58.913 52.381 0.00 0.00 46.75 2.62
2165 4070 1.098050 TACCCTCGTAGACCGAAAGC 58.902 55.000 0.00 0.00 46.75 3.51
2166 4071 1.226603 CCCTCGTAGACCGAAAGCG 60.227 63.158 0.00 0.00 46.75 4.68
2194 4099 5.122328 GTTTACTAACGCGGTTGATGTAG 57.878 43.478 13.68 0.00 0.00 2.74
2195 4100 4.439305 TTACTAACGCGGTTGATGTAGT 57.561 40.909 13.68 6.40 0.00 2.73
2196 4101 2.872370 ACTAACGCGGTTGATGTAGTC 58.128 47.619 13.68 0.00 0.00 2.59
2197 4102 2.229543 ACTAACGCGGTTGATGTAGTCA 59.770 45.455 13.68 0.00 34.25 3.41
2198 4103 2.157834 AACGCGGTTGATGTAGTCAA 57.842 45.000 12.47 0.00 44.36 3.18
2208 4113 2.984471 TGATGTAGTCAAACGACTTCGC 59.016 45.455 0.00 0.00 41.03 4.70
2209 4114 1.401530 TGTAGTCAAACGACTTCGCG 58.598 50.000 0.00 0.00 41.03 5.87
2210 4115 1.002576 TGTAGTCAAACGACTTCGCGA 60.003 47.619 3.71 3.71 41.03 5.87
2211 4116 2.248487 GTAGTCAAACGACTTCGCGAT 58.752 47.619 10.88 0.00 41.03 4.58
2212 4117 1.337821 AGTCAAACGACTTCGCGATC 58.662 50.000 10.88 4.28 41.03 3.69
2213 4118 0.365859 GTCAAACGACTTCGCGATCC 59.634 55.000 10.88 0.70 44.43 3.36
2214 4119 0.038983 TCAAACGACTTCGCGATCCA 60.039 50.000 10.88 0.00 44.43 3.41
2215 4120 0.787787 CAAACGACTTCGCGATCCAA 59.212 50.000 10.88 0.00 44.43 3.53
2216 4121 0.788391 AAACGACTTCGCGATCCAAC 59.212 50.000 10.88 0.00 44.43 3.77
2217 4122 0.038526 AACGACTTCGCGATCCAACT 60.039 50.000 10.88 0.00 44.43 3.16
2218 4123 0.732880 ACGACTTCGCGATCCAACTG 60.733 55.000 10.88 0.00 44.43 3.16
2219 4124 0.456142 CGACTTCGCGATCCAACTGA 60.456 55.000 10.88 0.00 0.00 3.41
2220 4125 1.799181 CGACTTCGCGATCCAACTGAT 60.799 52.381 10.88 0.00 36.01 2.90
2221 4126 1.855360 GACTTCGCGATCCAACTGATC 59.145 52.381 10.88 0.00 45.46 2.92
2222 4127 1.212616 CTTCGCGATCCAACTGATCC 58.787 55.000 10.88 0.00 46.06 3.36
2223 4128 0.534873 TTCGCGATCCAACTGATCCA 59.465 50.000 10.88 0.00 46.06 3.41
2224 4129 0.534873 TCGCGATCCAACTGATCCAA 59.465 50.000 3.71 0.00 46.06 3.53
2225 4130 0.933097 CGCGATCCAACTGATCCAAG 59.067 55.000 0.00 0.00 46.06 3.61
2226 4131 1.740380 CGCGATCCAACTGATCCAAGT 60.740 52.381 0.00 0.00 46.06 3.16
2227 4132 2.481276 CGCGATCCAACTGATCCAAGTA 60.481 50.000 0.00 0.00 46.06 2.24
2228 4133 2.866762 GCGATCCAACTGATCCAAGTAC 59.133 50.000 0.00 0.00 46.06 2.73
2229 4134 3.116300 CGATCCAACTGATCCAAGTACG 58.884 50.000 0.00 0.00 46.06 3.67
2230 4135 3.458189 GATCCAACTGATCCAAGTACGG 58.542 50.000 0.00 0.00 43.53 4.02
2231 4136 2.531771 TCCAACTGATCCAAGTACGGA 58.468 47.619 0.00 0.00 40.07 4.69
2232 4137 2.901192 TCCAACTGATCCAAGTACGGAA 59.099 45.455 0.00 0.00 38.95 4.30
2233 4138 3.000727 CCAACTGATCCAAGTACGGAAC 58.999 50.000 0.00 0.00 38.95 3.62
2246 4151 2.125793 GGAACGCACGGTACCTCC 60.126 66.667 10.90 5.04 0.00 4.30
2255 4160 2.027751 GGTACCTCCGCGATCAGC 59.972 66.667 8.23 0.00 43.95 4.26
2266 4171 1.417592 CGATCAGCACACGTTCAGC 59.582 57.895 0.00 0.00 0.00 4.26
2267 4172 1.010935 CGATCAGCACACGTTCAGCT 61.011 55.000 0.64 0.64 39.63 4.24
2268 4173 0.718343 GATCAGCACACGTTCAGCTC 59.282 55.000 3.38 0.00 36.26 4.09
2269 4174 1.010935 ATCAGCACACGTTCAGCTCG 61.011 55.000 3.38 0.00 36.26 5.03
2270 4175 2.356313 AGCACACGTTCAGCTCGG 60.356 61.111 0.64 0.00 32.05 4.63
2271 4176 2.661866 GCACACGTTCAGCTCGGT 60.662 61.111 0.00 0.00 0.00 4.69
2272 4177 2.943345 GCACACGTTCAGCTCGGTG 61.943 63.158 9.18 9.18 34.88 4.94
2273 4178 1.299850 CACACGTTCAGCTCGGTGA 60.300 57.895 9.25 0.00 34.24 4.02
2274 4179 1.299926 ACACGTTCAGCTCGGTGAC 60.300 57.895 9.25 0.00 0.00 3.67
2289 4194 3.372660 GGTGACGTCTCTTGAACTCTT 57.627 47.619 17.92 0.00 0.00 2.85
2290 4195 3.053455 GGTGACGTCTCTTGAACTCTTG 58.947 50.000 17.92 0.00 0.00 3.02
2291 4196 3.243434 GGTGACGTCTCTTGAACTCTTGA 60.243 47.826 17.92 0.00 0.00 3.02
2292 4197 4.551388 GTGACGTCTCTTGAACTCTTGAT 58.449 43.478 17.92 0.00 0.00 2.57
2293 4198 4.619336 GTGACGTCTCTTGAACTCTTGATC 59.381 45.833 17.92 0.00 0.00 2.92
2294 4199 4.520874 TGACGTCTCTTGAACTCTTGATCT 59.479 41.667 17.92 0.00 0.00 2.75
2295 4200 5.705905 TGACGTCTCTTGAACTCTTGATCTA 59.294 40.000 17.92 0.00 0.00 1.98
2296 4201 6.128145 TGACGTCTCTTGAACTCTTGATCTAG 60.128 42.308 17.92 0.00 0.00 2.43
2297 4202 5.708230 ACGTCTCTTGAACTCTTGATCTAGT 59.292 40.000 4.06 0.00 0.00 2.57
2298 4203 6.207810 ACGTCTCTTGAACTCTTGATCTAGTT 59.792 38.462 4.06 6.27 38.62 2.24
2299 4204 6.526325 CGTCTCTTGAACTCTTGATCTAGTTG 59.474 42.308 11.70 6.08 36.10 3.16
2300 4205 7.574030 CGTCTCTTGAACTCTTGATCTAGTTGA 60.574 40.741 11.70 3.27 36.10 3.18
2301 4206 7.754924 GTCTCTTGAACTCTTGATCTAGTTGAG 59.245 40.741 11.70 11.58 36.10 3.02
2302 4207 6.929625 TCTTGAACTCTTGATCTAGTTGAGG 58.070 40.000 11.70 6.11 36.10 3.86
2303 4208 5.078411 TGAACTCTTGATCTAGTTGAGGC 57.922 43.478 11.70 1.62 36.10 4.70
2304 4209 4.081420 TGAACTCTTGATCTAGTTGAGGCC 60.081 45.833 11.70 0.00 36.10 5.19
2305 4210 2.428890 ACTCTTGATCTAGTTGAGGCCG 59.571 50.000 0.00 0.00 0.00 6.13
2306 4211 2.690497 CTCTTGATCTAGTTGAGGCCGA 59.310 50.000 0.00 0.00 0.00 5.54
2307 4212 2.690497 TCTTGATCTAGTTGAGGCCGAG 59.310 50.000 0.00 0.00 0.00 4.63
2308 4213 1.403814 TGATCTAGTTGAGGCCGAGG 58.596 55.000 0.00 0.00 0.00 4.63
2309 4214 0.676736 GATCTAGTTGAGGCCGAGGG 59.323 60.000 0.00 0.00 0.00 4.30
2310 4215 0.261991 ATCTAGTTGAGGCCGAGGGA 59.738 55.000 0.00 0.00 0.00 4.20
2311 4216 0.395862 TCTAGTTGAGGCCGAGGGAG 60.396 60.000 0.00 0.00 0.00 4.30
2312 4217 0.395862 CTAGTTGAGGCCGAGGGAGA 60.396 60.000 0.00 0.00 0.00 3.71
2313 4218 0.395862 TAGTTGAGGCCGAGGGAGAG 60.396 60.000 0.00 0.00 0.00 3.20
2314 4219 1.985116 GTTGAGGCCGAGGGAGAGT 60.985 63.158 0.00 0.00 0.00 3.24
2315 4220 1.229209 TTGAGGCCGAGGGAGAGTT 60.229 57.895 0.00 0.00 0.00 3.01
2316 4221 1.258445 TTGAGGCCGAGGGAGAGTTC 61.258 60.000 0.00 0.00 0.00 3.01
2317 4222 2.364448 AGGCCGAGGGAGAGTTCC 60.364 66.667 0.00 0.00 43.23 3.62
2318 4223 3.839432 GGCCGAGGGAGAGTTCCG 61.839 72.222 0.00 0.00 45.04 4.30
2319 4224 3.069318 GCCGAGGGAGAGTTCCGT 61.069 66.667 0.00 0.00 45.04 4.69
2323 4228 3.701454 AGGGAGAGTTCCGTCAGC 58.299 61.111 0.00 0.00 45.04 4.26
2324 4229 1.228894 AGGGAGAGTTCCGTCAGCA 60.229 57.895 0.00 0.00 45.04 4.41
2325 4230 0.616111 AGGGAGAGTTCCGTCAGCAT 60.616 55.000 0.00 0.00 45.04 3.79
2326 4231 0.460987 GGGAGAGTTCCGTCAGCATG 60.461 60.000 0.00 0.00 45.04 4.06
2327 4232 0.532573 GGAGAGTTCCGTCAGCATGA 59.467 55.000 0.00 0.00 36.78 3.07
2348 4253 2.592574 CATGGCGGCGGTGATGAT 60.593 61.111 9.78 0.00 0.00 2.45
2349 4254 2.592574 ATGGCGGCGGTGATGATG 60.593 61.111 9.78 0.00 0.00 3.07
2350 4255 3.105686 ATGGCGGCGGTGATGATGA 62.106 57.895 9.78 0.00 0.00 2.92
2351 4256 2.513666 GGCGGCGGTGATGATGAA 60.514 61.111 9.78 0.00 0.00 2.57
2352 4257 2.537560 GGCGGCGGTGATGATGAAG 61.538 63.158 9.78 0.00 0.00 3.02
2353 4258 1.815421 GCGGCGGTGATGATGAAGT 60.815 57.895 9.78 0.00 0.00 3.01
2354 4259 1.369091 GCGGCGGTGATGATGAAGTT 61.369 55.000 9.78 0.00 0.00 2.66
2355 4260 1.086696 CGGCGGTGATGATGAAGTTT 58.913 50.000 0.00 0.00 0.00 2.66
2356 4261 2.276201 CGGCGGTGATGATGAAGTTTA 58.724 47.619 0.00 0.00 0.00 2.01
2357 4262 2.030457 CGGCGGTGATGATGAAGTTTAC 59.970 50.000 0.00 0.00 0.00 2.01
2358 4263 2.354821 GGCGGTGATGATGAAGTTTACC 59.645 50.000 0.00 0.00 0.00 2.85
2359 4264 3.006940 GCGGTGATGATGAAGTTTACCA 58.993 45.455 0.00 0.00 0.00 3.25
2360 4265 3.063997 GCGGTGATGATGAAGTTTACCAG 59.936 47.826 0.00 0.00 0.00 4.00
2361 4266 3.063997 CGGTGATGATGAAGTTTACCAGC 59.936 47.826 0.00 0.00 0.00 4.85
2362 4267 3.063997 GGTGATGATGAAGTTTACCAGCG 59.936 47.826 0.00 0.00 0.00 5.18
2363 4268 2.677836 TGATGATGAAGTTTACCAGCGC 59.322 45.455 0.00 0.00 0.00 5.92
2364 4269 2.177394 TGATGAAGTTTACCAGCGCA 57.823 45.000 11.47 0.00 0.00 6.09
2365 4270 2.076100 TGATGAAGTTTACCAGCGCAG 58.924 47.619 11.47 0.00 0.00 5.18
2366 4271 1.398390 GATGAAGTTTACCAGCGCAGG 59.602 52.381 18.43 18.43 0.00 4.85
2367 4272 0.605319 TGAAGTTTACCAGCGCAGGG 60.605 55.000 23.81 19.54 0.00 4.45
2368 4273 1.923227 GAAGTTTACCAGCGCAGGGC 61.923 60.000 23.81 9.96 44.05 5.19
2387 4292 1.546834 CTTCGCCTAAGCACTACGAC 58.453 55.000 0.00 0.00 39.83 4.34
2388 4293 0.179181 TTCGCCTAAGCACTACGACG 60.179 55.000 0.00 0.00 39.83 5.12
2389 4294 1.020861 TCGCCTAAGCACTACGACGA 61.021 55.000 0.00 0.00 39.83 4.20
2390 4295 0.029035 CGCCTAAGCACTACGACGAT 59.971 55.000 0.00 0.00 39.83 3.73
2391 4296 1.262417 CGCCTAAGCACTACGACGATA 59.738 52.381 0.00 0.00 39.83 2.92
2392 4297 2.095869 CGCCTAAGCACTACGACGATAT 60.096 50.000 0.00 0.00 39.83 1.63
2393 4298 3.235195 GCCTAAGCACTACGACGATATG 58.765 50.000 0.00 0.00 39.53 1.78
2394 4299 3.058432 GCCTAAGCACTACGACGATATGA 60.058 47.826 0.00 0.00 39.53 2.15
2395 4300 4.465016 CCTAAGCACTACGACGATATGAC 58.535 47.826 0.00 0.00 0.00 3.06
2396 4301 3.351020 AAGCACTACGACGATATGACC 57.649 47.619 0.00 0.00 0.00 4.02
2397 4302 1.263484 AGCACTACGACGATATGACCG 59.737 52.381 0.00 0.00 0.00 4.79
2398 4303 1.262417 GCACTACGACGATATGACCGA 59.738 52.381 0.00 0.00 0.00 4.69
2399 4304 2.662249 GCACTACGACGATATGACCGAG 60.662 54.545 0.00 0.00 0.00 4.63
2400 4305 2.096367 CACTACGACGATATGACCGAGG 60.096 54.545 0.00 0.00 0.00 4.63
2401 4306 2.141517 CTACGACGATATGACCGAGGT 58.858 52.381 0.00 0.00 0.00 3.85
2402 4307 0.661552 ACGACGATATGACCGAGGTG 59.338 55.000 0.00 0.00 0.00 4.00
2403 4308 0.661552 CGACGATATGACCGAGGTGT 59.338 55.000 0.00 0.00 0.00 4.16
2404 4309 1.597199 CGACGATATGACCGAGGTGTG 60.597 57.143 0.00 0.00 0.00 3.82
2405 4310 1.404391 GACGATATGACCGAGGTGTGT 59.596 52.381 0.00 0.00 0.00 3.72
2406 4311 1.822990 ACGATATGACCGAGGTGTGTT 59.177 47.619 0.00 0.00 0.00 3.32
2407 4312 3.018856 ACGATATGACCGAGGTGTGTTA 58.981 45.455 0.00 0.00 0.00 2.41
2408 4313 3.181493 ACGATATGACCGAGGTGTGTTAC 60.181 47.826 0.00 0.00 0.00 2.50
2409 4314 3.066342 CGATATGACCGAGGTGTGTTACT 59.934 47.826 0.00 0.00 0.00 2.24
2410 4315 2.743636 ATGACCGAGGTGTGTTACTG 57.256 50.000 0.00 0.00 0.00 2.74
2411 4316 1.405872 TGACCGAGGTGTGTTACTGT 58.594 50.000 0.00 0.00 0.00 3.55
2412 4317 1.067974 TGACCGAGGTGTGTTACTGTG 59.932 52.381 0.00 0.00 0.00 3.66
2413 4318 0.391597 ACCGAGGTGTGTTACTGTGG 59.608 55.000 0.00 0.00 0.00 4.17
2414 4319 0.677288 CCGAGGTGTGTTACTGTGGA 59.323 55.000 0.00 0.00 0.00 4.02
2415 4320 1.336887 CCGAGGTGTGTTACTGTGGAG 60.337 57.143 0.00 0.00 0.00 3.86
2416 4321 1.336887 CGAGGTGTGTTACTGTGGAGG 60.337 57.143 0.00 0.00 0.00 4.30
2417 4322 1.002087 GAGGTGTGTTACTGTGGAGGG 59.998 57.143 0.00 0.00 0.00 4.30
2418 4323 0.036306 GGTGTGTTACTGTGGAGGGG 59.964 60.000 0.00 0.00 0.00 4.79
2419 4324 0.036306 GTGTGTTACTGTGGAGGGGG 59.964 60.000 0.00 0.00 0.00 5.40
2441 4346 4.571250 CGCACACGGCTAAGAGAA 57.429 55.556 0.00 0.00 41.67 2.87
2442 4347 2.822306 CGCACACGGCTAAGAGAAA 58.178 52.632 0.00 0.00 41.67 2.52
2443 4348 0.438830 CGCACACGGCTAAGAGAAAC 59.561 55.000 0.00 0.00 41.67 2.78
2444 4349 1.797025 GCACACGGCTAAGAGAAACT 58.203 50.000 0.00 0.00 40.25 2.66
2445 4350 2.143925 GCACACGGCTAAGAGAAACTT 58.856 47.619 0.00 0.00 42.04 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 401 1.300931 GTCAGTCGAACAGCAGCCA 60.301 57.895 0.00 0.00 0.00 4.75
77 420 3.084039 TGTTGATGAGATTGGTGAAGGC 58.916 45.455 0.00 0.00 0.00 4.35
125 468 1.229082 TTGTAGCACCCGGGAGTCT 60.229 57.895 32.02 22.19 0.00 3.24
275 618 2.165641 CCTGTTGCATCTCCGTACTGTA 59.834 50.000 0.00 0.00 0.00 2.74
288 631 2.005606 TTTCTGCCTCCCCTGTTGCA 62.006 55.000 0.00 0.00 0.00 4.08
345 2091 1.141254 CTCAGGCCTCTCTCATGCATT 59.859 52.381 0.00 0.00 0.00 3.56
420 2168 2.243602 TTTTCCACGTGTCCCTGTAC 57.756 50.000 15.65 0.00 0.00 2.90
462 2210 8.746052 ATCTCTCTATATCCCTATTTCTCACG 57.254 38.462 0.00 0.00 0.00 4.35
504 2252 0.175760 GTGCCGCTCTATCAAGGTCA 59.824 55.000 0.00 0.00 0.00 4.02
518 2266 1.920574 CACTCTATTTCTCACGTGCCG 59.079 52.381 11.67 4.39 0.00 5.69
520 2268 5.822278 TCTATCACTCTATTTCTCACGTGC 58.178 41.667 11.67 0.00 0.00 5.34
607 2355 6.663093 TCTCTTATCTCTCTATTCCTCATGCC 59.337 42.308 0.00 0.00 0.00 4.40
672 2423 9.914131 CGGTGTAGATCTGATCTTTAATCATAA 57.086 33.333 23.98 1.42 40.76 1.90
816 2568 8.344831 GCAAGTGCACAAGATATATGTTCATTA 58.655 33.333 21.04 0.00 41.59 1.90
817 2569 7.198390 GCAAGTGCACAAGATATATGTTCATT 58.802 34.615 21.04 0.00 41.59 2.57
818 2570 6.732154 GCAAGTGCACAAGATATATGTTCAT 58.268 36.000 21.04 0.00 41.59 2.57
819 2571 6.122850 GCAAGTGCACAAGATATATGTTCA 57.877 37.500 21.04 0.00 41.59 3.18
926 2710 6.834451 TCCAGTAGGAAATAGTTAGACTCCAG 59.166 42.308 0.00 0.00 42.23 3.86
1561 3418 6.582437 TTCTTTCGTCAAATTTTTCCTTGC 57.418 33.333 0.00 0.00 0.00 4.01
1846 3734 3.325870 TCACTTGTCTTATGCCGTCTTG 58.674 45.455 0.00 0.00 0.00 3.02
1847 3735 3.258372 TCTCACTTGTCTTATGCCGTCTT 59.742 43.478 0.00 0.00 0.00 3.01
1891 3779 6.932901 TTTCTTGCAATTTGCTTATCTTCG 57.067 33.333 21.19 2.69 45.31 3.79
1966 3859 1.134729 ACGTGGGTTGTCGTTGTACTT 60.135 47.619 0.00 0.00 36.93 2.24
2048 3953 6.015918 TGAAATATTGTGTTCCCCAACAGAT 58.984 36.000 0.00 0.00 43.42 2.90
2049 3954 5.389520 TGAAATATTGTGTTCCCCAACAGA 58.610 37.500 0.00 0.00 43.42 3.41
2050 3955 5.720371 TGAAATATTGTGTTCCCCAACAG 57.280 39.130 0.00 0.00 43.42 3.16
2051 3956 6.485830 TTTGAAATATTGTGTTCCCCAACA 57.514 33.333 0.00 0.00 40.40 3.33
2052 3957 7.793927 TTTTTGAAATATTGTGTTCCCCAAC 57.206 32.000 0.00 0.00 0.00 3.77
2074 3979 5.484715 TCTTCCGTGATCGTAGGAATTTTT 58.515 37.500 14.18 0.00 42.43 1.94
2075 3980 5.080969 TCTTCCGTGATCGTAGGAATTTT 57.919 39.130 14.18 0.00 42.43 1.82
2076 3981 4.730949 TCTTCCGTGATCGTAGGAATTT 57.269 40.909 14.18 0.00 42.43 1.82
2077 3982 4.585162 AGATCTTCCGTGATCGTAGGAATT 59.415 41.667 14.18 7.50 45.35 2.17
2078 3983 4.145807 AGATCTTCCGTGATCGTAGGAAT 58.854 43.478 14.18 3.97 45.35 3.01
2079 3984 3.552875 AGATCTTCCGTGATCGTAGGAA 58.447 45.455 13.43 13.43 45.35 3.36
2080 3985 3.210232 AGATCTTCCGTGATCGTAGGA 57.790 47.619 0.00 0.17 45.35 2.94
2081 3986 4.938832 AGATAGATCTTCCGTGATCGTAGG 59.061 45.833 0.00 0.00 45.35 3.18
2082 3987 6.310960 CAAGATAGATCTTCCGTGATCGTAG 58.689 44.000 0.00 0.00 44.84 3.51
2083 3988 5.181433 CCAAGATAGATCTTCCGTGATCGTA 59.819 44.000 0.00 0.00 44.84 3.43
2084 3989 4.022762 CCAAGATAGATCTTCCGTGATCGT 60.023 45.833 0.00 0.00 44.84 3.73
2085 3990 4.216472 TCCAAGATAGATCTTCCGTGATCG 59.784 45.833 0.00 0.00 44.84 3.69
2086 3991 5.713792 TCCAAGATAGATCTTCCGTGATC 57.286 43.478 0.00 0.00 44.84 2.92
2087 3992 6.485830 TTTCCAAGATAGATCTTCCGTGAT 57.514 37.500 0.00 0.00 44.84 3.06
2088 3993 5.932619 TTTCCAAGATAGATCTTCCGTGA 57.067 39.130 0.00 0.00 44.84 4.35
2089 3994 5.049818 GCATTTCCAAGATAGATCTTCCGTG 60.050 44.000 0.00 1.89 44.84 4.94
2090 3995 5.059833 GCATTTCCAAGATAGATCTTCCGT 58.940 41.667 0.00 0.00 44.84 4.69
2091 3996 5.059161 TGCATTTCCAAGATAGATCTTCCG 58.941 41.667 0.00 0.00 44.84 4.30
2092 3997 7.148272 GCTATGCATTTCCAAGATAGATCTTCC 60.148 40.741 3.54 0.00 44.84 3.46
2093 3998 7.389884 TGCTATGCATTTCCAAGATAGATCTTC 59.610 37.037 3.54 0.00 38.17 2.87
2094 3999 7.229308 TGCTATGCATTTCCAAGATAGATCTT 58.771 34.615 3.54 0.00 39.70 2.40
2095 4000 6.776744 TGCTATGCATTTCCAAGATAGATCT 58.223 36.000 3.54 0.00 33.87 2.75
2096 4001 7.444629 TTGCTATGCATTTCCAAGATAGATC 57.555 36.000 3.54 0.00 38.76 2.75
2097 4002 7.668469 TCATTGCTATGCATTTCCAAGATAGAT 59.332 33.333 3.54 0.00 38.76 1.98
2098 4003 6.999871 TCATTGCTATGCATTTCCAAGATAGA 59.000 34.615 3.54 1.72 38.76 1.98
2099 4004 7.174426 TCTCATTGCTATGCATTTCCAAGATAG 59.826 37.037 3.54 5.68 38.76 2.08
2100 4005 6.999871 TCTCATTGCTATGCATTTCCAAGATA 59.000 34.615 3.54 0.00 38.76 1.98
2101 4006 5.831525 TCTCATTGCTATGCATTTCCAAGAT 59.168 36.000 3.54 0.00 38.76 2.40
2102 4007 5.195185 TCTCATTGCTATGCATTTCCAAGA 58.805 37.500 3.54 5.41 38.76 3.02
2103 4008 5.507482 CCTCTCATTGCTATGCATTTCCAAG 60.507 44.000 3.54 0.00 38.76 3.61
2104 4009 4.340097 CCTCTCATTGCTATGCATTTCCAA 59.660 41.667 3.54 6.66 38.76 3.53
2105 4010 3.887110 CCTCTCATTGCTATGCATTTCCA 59.113 43.478 3.54 0.00 38.76 3.53
2106 4011 3.255149 CCCTCTCATTGCTATGCATTTCC 59.745 47.826 3.54 0.00 38.76 3.13
2107 4012 3.255149 CCCCTCTCATTGCTATGCATTTC 59.745 47.826 3.54 0.00 38.76 2.17
2108 4013 3.117398 TCCCCTCTCATTGCTATGCATTT 60.117 43.478 3.54 0.00 38.76 2.32
2109 4014 2.444388 TCCCCTCTCATTGCTATGCATT 59.556 45.455 3.54 0.00 38.76 3.56
2110 4015 2.040012 CTCCCCTCTCATTGCTATGCAT 59.960 50.000 3.79 3.79 38.76 3.96
2111 4016 1.419012 CTCCCCTCTCATTGCTATGCA 59.581 52.381 3.00 0.00 36.47 3.96
2112 4017 1.696336 TCTCCCCTCTCATTGCTATGC 59.304 52.381 3.00 0.00 0.00 3.14
2113 4018 2.971330 ACTCTCCCCTCTCATTGCTATG 59.029 50.000 1.30 1.30 0.00 2.23
2114 4019 2.971330 CACTCTCCCCTCTCATTGCTAT 59.029 50.000 0.00 0.00 0.00 2.97
2115 4020 2.292521 ACACTCTCCCCTCTCATTGCTA 60.293 50.000 0.00 0.00 0.00 3.49
2116 4021 1.202330 CACTCTCCCCTCTCATTGCT 58.798 55.000 0.00 0.00 0.00 3.91
2117 4022 0.908198 ACACTCTCCCCTCTCATTGC 59.092 55.000 0.00 0.00 0.00 3.56
2118 4023 1.905215 ACACACTCTCCCCTCTCATTG 59.095 52.381 0.00 0.00 0.00 2.82
2119 4024 2.183679 GACACACTCTCCCCTCTCATT 58.816 52.381 0.00 0.00 0.00 2.57
2120 4025 1.360852 AGACACACTCTCCCCTCTCAT 59.639 52.381 0.00 0.00 0.00 2.90
2121 4026 0.780637 AGACACACTCTCCCCTCTCA 59.219 55.000 0.00 0.00 0.00 3.27
2122 4027 2.371306 GTAGACACACTCTCCCCTCTC 58.629 57.143 0.00 0.00 0.00 3.20
2123 4028 1.340211 CGTAGACACACTCTCCCCTCT 60.340 57.143 0.00 0.00 0.00 3.69
2124 4029 1.096416 CGTAGACACACTCTCCCCTC 58.904 60.000 0.00 0.00 0.00 4.30
2125 4030 0.404812 ACGTAGACACACTCTCCCCT 59.595 55.000 0.00 0.00 0.00 4.79
2126 4031 0.526662 CACGTAGACACACTCTCCCC 59.473 60.000 0.00 0.00 0.00 4.81
2127 4032 1.245732 ACACGTAGACACACTCTCCC 58.754 55.000 0.00 0.00 0.00 4.30
2128 4033 2.161211 GGTACACGTAGACACACTCTCC 59.839 54.545 0.00 0.00 0.00 3.71
2129 4034 2.161211 GGGTACACGTAGACACACTCTC 59.839 54.545 0.00 0.00 0.00 3.20
2130 4035 2.157738 GGGTACACGTAGACACACTCT 58.842 52.381 0.00 0.00 0.00 3.24
2131 4036 2.157738 AGGGTACACGTAGACACACTC 58.842 52.381 4.27 0.00 0.00 3.51
2132 4037 2.157738 GAGGGTACACGTAGACACACT 58.842 52.381 4.27 0.00 0.00 3.55
2133 4038 1.135859 CGAGGGTACACGTAGACACAC 60.136 57.143 4.27 0.00 0.00 3.82
2134 4039 1.159285 CGAGGGTACACGTAGACACA 58.841 55.000 4.27 0.00 0.00 3.72
2135 4040 1.160137 ACGAGGGTACACGTAGACAC 58.840 55.000 9.51 0.00 40.37 3.67
2136 4041 2.760634 TACGAGGGTACACGTAGACA 57.239 50.000 12.60 0.00 41.88 3.41
2140 4045 2.024176 GGTCTACGAGGGTACACGTA 57.976 55.000 14.74 14.74 41.88 3.57
2141 4046 2.859992 GGTCTACGAGGGTACACGT 58.140 57.895 14.19 14.19 43.65 4.49
2159 4064 0.788391 AGTAAACGCTTCCGCTTTCG 59.212 50.000 0.00 0.00 38.22 3.46
2160 4065 3.729684 GTTAGTAAACGCTTCCGCTTTC 58.270 45.455 0.00 0.00 38.22 2.62
2161 4066 3.800929 GTTAGTAAACGCTTCCGCTTT 57.199 42.857 0.00 0.00 38.22 3.51
2172 4077 4.622740 ACTACATCAACCGCGTTAGTAAAC 59.377 41.667 4.92 0.00 0.00 2.01
2173 4078 4.808558 ACTACATCAACCGCGTTAGTAAA 58.191 39.130 4.92 0.00 0.00 2.01
2174 4079 4.082841 TGACTACATCAACCGCGTTAGTAA 60.083 41.667 4.92 0.00 33.02 2.24
2175 4080 3.439825 TGACTACATCAACCGCGTTAGTA 59.560 43.478 4.92 0.00 33.02 1.82
2176 4081 2.229543 TGACTACATCAACCGCGTTAGT 59.770 45.455 4.92 0.00 33.02 2.24
2177 4082 2.871133 TGACTACATCAACCGCGTTAG 58.129 47.619 4.92 0.00 33.02 2.34
2178 4083 3.300852 TTGACTACATCAACCGCGTTA 57.699 42.857 4.92 0.00 42.62 3.18
2179 4084 2.157834 TTGACTACATCAACCGCGTT 57.842 45.000 4.92 0.00 42.62 4.84
2180 4085 3.736475 CGTTTGACTACATCAACCGCGT 61.736 50.000 4.92 0.00 44.72 6.01
2181 4086 1.201769 CGTTTGACTACATCAACCGCG 60.202 52.381 0.00 0.00 44.72 6.46
2182 4087 2.503943 CGTTTGACTACATCAACCGC 57.496 50.000 0.00 0.00 44.72 5.68
2194 4099 0.365859 GGATCGCGAAGTCGTTTGAC 59.634 55.000 15.24 0.00 45.86 3.18
2195 4100 0.038983 TGGATCGCGAAGTCGTTTGA 60.039 50.000 15.24 0.00 42.22 2.69
2196 4101 0.787787 TTGGATCGCGAAGTCGTTTG 59.212 50.000 15.24 0.00 42.22 2.93
2197 4102 0.788391 GTTGGATCGCGAAGTCGTTT 59.212 50.000 15.24 0.00 42.22 3.60
2198 4103 0.038526 AGTTGGATCGCGAAGTCGTT 60.039 50.000 15.24 0.00 42.22 3.85
2199 4104 0.732880 CAGTTGGATCGCGAAGTCGT 60.733 55.000 15.24 0.00 42.22 4.34
2200 4105 0.456142 TCAGTTGGATCGCGAAGTCG 60.456 55.000 15.24 0.00 43.27 4.18
2201 4106 1.855360 GATCAGTTGGATCGCGAAGTC 59.145 52.381 15.24 7.11 42.81 3.01
2202 4107 1.927895 GATCAGTTGGATCGCGAAGT 58.072 50.000 15.24 0.00 42.81 3.01
2210 4115 3.104512 TCCGTACTTGGATCAGTTGGAT 58.895 45.455 0.00 0.00 39.53 3.41
2211 4116 2.531771 TCCGTACTTGGATCAGTTGGA 58.468 47.619 0.00 0.00 31.53 3.53
2212 4117 3.000727 GTTCCGTACTTGGATCAGTTGG 58.999 50.000 0.00 0.00 38.00 3.77
2213 4118 2.666508 CGTTCCGTACTTGGATCAGTTG 59.333 50.000 0.00 0.00 38.00 3.16
2214 4119 2.929592 GCGTTCCGTACTTGGATCAGTT 60.930 50.000 0.00 0.00 38.00 3.16
2215 4120 1.403780 GCGTTCCGTACTTGGATCAGT 60.404 52.381 0.00 0.00 38.00 3.41
2216 4121 1.278238 GCGTTCCGTACTTGGATCAG 58.722 55.000 0.00 0.00 38.00 2.90
2217 4122 0.604073 TGCGTTCCGTACTTGGATCA 59.396 50.000 0.00 0.00 38.00 2.92
2218 4123 0.997196 GTGCGTTCCGTACTTGGATC 59.003 55.000 0.00 0.00 39.22 3.36
2219 4124 0.734942 CGTGCGTTCCGTACTTGGAT 60.735 55.000 3.57 0.00 40.08 3.41
2220 4125 1.372004 CGTGCGTTCCGTACTTGGA 60.372 57.895 3.57 0.00 40.08 3.53
2221 4126 2.377310 CCGTGCGTTCCGTACTTGG 61.377 63.158 3.57 0.00 40.08 3.61
2222 4127 0.387112 TACCGTGCGTTCCGTACTTG 60.387 55.000 3.57 0.00 40.08 3.16
2223 4128 0.387239 GTACCGTGCGTTCCGTACTT 60.387 55.000 3.57 0.00 40.08 2.24
2224 4129 1.210155 GTACCGTGCGTTCCGTACT 59.790 57.895 3.57 0.00 40.08 2.73
2225 4130 1.801512 GGTACCGTGCGTTCCGTAC 60.802 63.158 0.00 0.00 38.96 3.67
2226 4131 1.922135 GAGGTACCGTGCGTTCCGTA 61.922 60.000 6.18 0.00 37.02 4.02
2227 4132 3.273080 GAGGTACCGTGCGTTCCGT 62.273 63.158 6.18 0.00 37.02 4.69
2228 4133 2.505557 GAGGTACCGTGCGTTCCG 60.506 66.667 6.18 0.00 37.02 4.30
2229 4134 2.125793 GGAGGTACCGTGCGTTCC 60.126 66.667 6.18 2.80 32.13 3.62
2238 4143 2.027751 GCTGATCGCGGAGGTACC 59.972 66.667 6.13 2.73 0.00 3.34
2239 4144 1.589196 GTGCTGATCGCGGAGGTAC 60.589 63.158 6.13 0.45 43.27 3.34
2240 4145 2.049767 TGTGCTGATCGCGGAGGTA 61.050 57.895 6.13 0.00 43.27 3.08
2241 4146 3.381983 TGTGCTGATCGCGGAGGT 61.382 61.111 6.13 0.00 43.27 3.85
2242 4147 2.887568 GTGTGCTGATCGCGGAGG 60.888 66.667 6.13 0.00 43.27 4.30
2243 4148 3.250323 CGTGTGCTGATCGCGGAG 61.250 66.667 6.13 0.74 43.27 4.63
2244 4149 3.567478 AACGTGTGCTGATCGCGGA 62.567 57.895 6.13 0.00 43.27 5.54
2245 4150 3.071459 GAACGTGTGCTGATCGCGG 62.071 63.158 6.13 0.00 43.27 6.46
2246 4151 2.271024 CTGAACGTGTGCTGATCGCG 62.271 60.000 0.00 0.00 43.27 5.87
2247 4152 1.417592 CTGAACGTGTGCTGATCGC 59.582 57.895 0.00 3.07 39.77 4.58
2248 4153 1.010935 AGCTGAACGTGTGCTGATCG 61.011 55.000 8.99 0.00 35.54 3.69
2249 4154 0.718343 GAGCTGAACGTGTGCTGATC 59.282 55.000 13.62 4.33 37.16 2.92
2250 4155 1.010935 CGAGCTGAACGTGTGCTGAT 61.011 55.000 13.62 0.00 37.16 2.90
2251 4156 1.661509 CGAGCTGAACGTGTGCTGA 60.662 57.895 13.62 0.00 37.16 4.26
2252 4157 2.661566 CCGAGCTGAACGTGTGCTG 61.662 63.158 13.62 7.28 37.16 4.41
2253 4158 2.356313 CCGAGCTGAACGTGTGCT 60.356 61.111 9.46 9.46 40.02 4.40
2254 4159 2.661866 ACCGAGCTGAACGTGTGC 60.662 61.111 0.00 0.00 0.00 4.57
2255 4160 1.299850 TCACCGAGCTGAACGTGTG 60.300 57.895 0.00 0.00 35.24 3.82
2256 4161 1.299926 GTCACCGAGCTGAACGTGT 60.300 57.895 0.00 0.00 0.00 4.49
2257 4162 2.365068 CGTCACCGAGCTGAACGTG 61.365 63.158 0.00 0.00 35.63 4.49
2258 4163 2.050351 CGTCACCGAGCTGAACGT 60.050 61.111 0.00 0.00 35.63 3.99
2259 4164 2.050351 ACGTCACCGAGCTGAACG 60.050 61.111 0.00 0.00 37.88 3.95
2260 4165 0.729816 GAGACGTCACCGAGCTGAAC 60.730 60.000 19.50 0.00 37.88 3.18
2261 4166 0.889638 AGAGACGTCACCGAGCTGAA 60.890 55.000 19.50 0.00 37.88 3.02
2262 4167 0.889638 AAGAGACGTCACCGAGCTGA 60.890 55.000 19.50 0.00 37.88 4.26
2263 4168 0.730834 CAAGAGACGTCACCGAGCTG 60.731 60.000 19.50 1.11 37.88 4.24
2264 4169 0.889638 TCAAGAGACGTCACCGAGCT 60.890 55.000 19.50 1.97 37.88 4.09
2265 4170 0.039437 TTCAAGAGACGTCACCGAGC 60.039 55.000 19.50 0.00 37.88 5.03
2266 4171 1.267261 AGTTCAAGAGACGTCACCGAG 59.733 52.381 19.50 4.54 37.88 4.63
2267 4172 1.266175 GAGTTCAAGAGACGTCACCGA 59.734 52.381 19.50 8.42 37.88 4.69
2268 4173 1.267261 AGAGTTCAAGAGACGTCACCG 59.733 52.381 19.50 6.01 40.83 4.94
2269 4174 3.053455 CAAGAGTTCAAGAGACGTCACC 58.947 50.000 19.50 9.11 0.00 4.02
2270 4175 3.966154 TCAAGAGTTCAAGAGACGTCAC 58.034 45.455 19.50 12.15 0.00 3.67
2271 4176 4.520874 AGATCAAGAGTTCAAGAGACGTCA 59.479 41.667 19.50 0.00 0.00 4.35
2272 4177 5.054390 AGATCAAGAGTTCAAGAGACGTC 57.946 43.478 7.70 7.70 0.00 4.34
2273 4178 5.708230 ACTAGATCAAGAGTTCAAGAGACGT 59.292 40.000 0.00 0.00 0.00 4.34
2274 4179 6.189677 ACTAGATCAAGAGTTCAAGAGACG 57.810 41.667 0.00 0.00 0.00 4.18
2275 4180 7.598278 TCAACTAGATCAAGAGTTCAAGAGAC 58.402 38.462 0.00 0.00 33.60 3.36
2276 4181 7.093988 CCTCAACTAGATCAAGAGTTCAAGAGA 60.094 40.741 15.32 7.00 33.60 3.10
2277 4182 7.035004 CCTCAACTAGATCAAGAGTTCAAGAG 58.965 42.308 0.00 5.12 33.60 2.85
2278 4183 6.573289 GCCTCAACTAGATCAAGAGTTCAAGA 60.573 42.308 0.00 0.00 33.60 3.02
2279 4184 5.580297 GCCTCAACTAGATCAAGAGTTCAAG 59.420 44.000 0.00 2.24 33.60 3.02
2280 4185 5.482908 GCCTCAACTAGATCAAGAGTTCAA 58.517 41.667 0.00 0.00 33.60 2.69
2281 4186 4.081420 GGCCTCAACTAGATCAAGAGTTCA 60.081 45.833 0.00 0.00 33.60 3.18
2282 4187 4.438148 GGCCTCAACTAGATCAAGAGTTC 58.562 47.826 0.00 0.00 33.60 3.01
2283 4188 3.118956 CGGCCTCAACTAGATCAAGAGTT 60.119 47.826 0.00 0.00 36.31 3.01
2284 4189 2.428890 CGGCCTCAACTAGATCAAGAGT 59.571 50.000 0.00 0.00 0.00 3.24
2285 4190 2.690497 TCGGCCTCAACTAGATCAAGAG 59.310 50.000 0.00 0.00 0.00 2.85
2286 4191 2.690497 CTCGGCCTCAACTAGATCAAGA 59.310 50.000 0.00 0.00 0.00 3.02
2287 4192 2.223923 CCTCGGCCTCAACTAGATCAAG 60.224 54.545 0.00 0.00 0.00 3.02
2288 4193 1.757118 CCTCGGCCTCAACTAGATCAA 59.243 52.381 0.00 0.00 0.00 2.57
2289 4194 1.403814 CCTCGGCCTCAACTAGATCA 58.596 55.000 0.00 0.00 0.00 2.92
2290 4195 0.676736 CCCTCGGCCTCAACTAGATC 59.323 60.000 0.00 0.00 0.00 2.75
2291 4196 0.261991 TCCCTCGGCCTCAACTAGAT 59.738 55.000 0.00 0.00 0.00 1.98
2292 4197 0.395862 CTCCCTCGGCCTCAACTAGA 60.396 60.000 0.00 0.00 0.00 2.43
2293 4198 0.395862 TCTCCCTCGGCCTCAACTAG 60.396 60.000 0.00 0.00 0.00 2.57
2294 4199 0.395862 CTCTCCCTCGGCCTCAACTA 60.396 60.000 0.00 0.00 0.00 2.24
2295 4200 1.684049 CTCTCCCTCGGCCTCAACT 60.684 63.158 0.00 0.00 0.00 3.16
2296 4201 1.545706 AACTCTCCCTCGGCCTCAAC 61.546 60.000 0.00 0.00 0.00 3.18
2297 4202 1.229209 AACTCTCCCTCGGCCTCAA 60.229 57.895 0.00 0.00 0.00 3.02
2298 4203 1.682684 GAACTCTCCCTCGGCCTCA 60.683 63.158 0.00 0.00 0.00 3.86
2299 4204 2.428085 GGAACTCTCCCTCGGCCTC 61.428 68.421 0.00 0.00 35.42 4.70
2300 4205 2.364448 GGAACTCTCCCTCGGCCT 60.364 66.667 0.00 0.00 35.42 5.19
2301 4206 3.839432 CGGAACTCTCCCTCGGCC 61.839 72.222 0.00 0.00 38.71 6.13
2302 4207 3.066233 GACGGAACTCTCCCTCGGC 62.066 68.421 0.00 0.00 38.71 5.54
2303 4208 1.658686 CTGACGGAACTCTCCCTCGG 61.659 65.000 0.00 0.00 38.71 4.63
2304 4209 1.803943 CTGACGGAACTCTCCCTCG 59.196 63.158 0.00 0.00 38.71 4.63
2305 4210 1.251527 TGCTGACGGAACTCTCCCTC 61.252 60.000 0.00 0.00 38.71 4.30
2306 4211 0.616111 ATGCTGACGGAACTCTCCCT 60.616 55.000 0.00 0.00 38.71 4.20
2307 4212 0.460987 CATGCTGACGGAACTCTCCC 60.461 60.000 0.00 0.00 38.71 4.30
2308 4213 0.532573 TCATGCTGACGGAACTCTCC 59.467 55.000 0.00 0.00 38.52 3.71
2309 4214 1.634702 GTCATGCTGACGGAACTCTC 58.365 55.000 1.40 0.00 37.67 3.20
2310 4215 3.822607 GTCATGCTGACGGAACTCT 57.177 52.632 1.40 0.00 37.67 3.24
2318 4223 3.104766 CCATGCCGTCATGCTGAC 58.895 61.111 0.00 6.31 46.69 3.51
2319 4224 2.825387 GCCATGCCGTCATGCTGA 60.825 61.111 0.00 0.00 46.69 4.26
2320 4225 4.246206 CGCCATGCCGTCATGCTG 62.246 66.667 0.00 0.00 46.69 4.41
2331 4236 2.592574 ATCATCACCGCCGCCATG 60.593 61.111 0.00 0.00 0.00 3.66
2332 4237 2.592574 CATCATCACCGCCGCCAT 60.593 61.111 0.00 0.00 0.00 4.40
2333 4238 3.322318 TTCATCATCACCGCCGCCA 62.322 57.895 0.00 0.00 0.00 5.69
2334 4239 2.513666 TTCATCATCACCGCCGCC 60.514 61.111 0.00 0.00 0.00 6.13
2335 4240 1.369091 AACTTCATCATCACCGCCGC 61.369 55.000 0.00 0.00 0.00 6.53
2336 4241 1.086696 AAACTTCATCATCACCGCCG 58.913 50.000 0.00 0.00 0.00 6.46
2337 4242 2.354821 GGTAAACTTCATCATCACCGCC 59.645 50.000 0.00 0.00 0.00 6.13
2338 4243 3.006940 TGGTAAACTTCATCATCACCGC 58.993 45.455 0.00 0.00 0.00 5.68
2339 4244 3.063997 GCTGGTAAACTTCATCATCACCG 59.936 47.826 0.00 0.00 0.00 4.94
2340 4245 3.063997 CGCTGGTAAACTTCATCATCACC 59.936 47.826 0.00 0.00 0.00 4.02
2341 4246 3.485877 GCGCTGGTAAACTTCATCATCAC 60.486 47.826 0.00 0.00 0.00 3.06
2342 4247 2.677836 GCGCTGGTAAACTTCATCATCA 59.322 45.455 0.00 0.00 0.00 3.07
2343 4248 2.677836 TGCGCTGGTAAACTTCATCATC 59.322 45.455 9.73 0.00 0.00 2.92
2344 4249 2.679837 CTGCGCTGGTAAACTTCATCAT 59.320 45.455 9.73 0.00 0.00 2.45
2345 4250 2.076100 CTGCGCTGGTAAACTTCATCA 58.924 47.619 9.73 0.00 0.00 3.07
2346 4251 1.398390 CCTGCGCTGGTAAACTTCATC 59.602 52.381 24.00 0.00 0.00 2.92
2347 4252 1.453155 CCTGCGCTGGTAAACTTCAT 58.547 50.000 24.00 0.00 0.00 2.57
2348 4253 0.605319 CCCTGCGCTGGTAAACTTCA 60.605 55.000 28.74 0.00 0.00 3.02
2349 4254 1.923227 GCCCTGCGCTGGTAAACTTC 61.923 60.000 28.74 7.70 0.00 3.01
2350 4255 1.971695 GCCCTGCGCTGGTAAACTT 60.972 57.895 28.74 0.00 0.00 2.66
2351 4256 2.359975 GCCCTGCGCTGGTAAACT 60.360 61.111 28.74 0.00 0.00 2.66
2368 4273 1.546834 GTCGTAGTGCTTAGGCGAAG 58.453 55.000 2.68 2.68 42.25 3.79
2369 4274 0.179181 CGTCGTAGTGCTTAGGCGAA 60.179 55.000 0.00 0.00 42.25 4.70
2370 4275 1.020861 TCGTCGTAGTGCTTAGGCGA 61.021 55.000 0.00 0.70 42.25 5.54
2371 4276 0.029035 ATCGTCGTAGTGCTTAGGCG 59.971 55.000 0.00 0.00 42.25 5.52
2372 4277 3.058432 TCATATCGTCGTAGTGCTTAGGC 60.058 47.826 0.00 0.00 39.26 3.93
2373 4278 4.465016 GTCATATCGTCGTAGTGCTTAGG 58.535 47.826 0.00 0.00 0.00 2.69
2374 4279 4.465016 GGTCATATCGTCGTAGTGCTTAG 58.535 47.826 0.00 0.00 0.00 2.18
2375 4280 3.059393 CGGTCATATCGTCGTAGTGCTTA 60.059 47.826 0.00 0.00 0.00 3.09
2376 4281 2.286831 CGGTCATATCGTCGTAGTGCTT 60.287 50.000 0.00 0.00 0.00 3.91
2377 4282 1.263484 CGGTCATATCGTCGTAGTGCT 59.737 52.381 0.00 0.00 0.00 4.40
2378 4283 1.262417 TCGGTCATATCGTCGTAGTGC 59.738 52.381 0.00 0.00 0.00 4.40
2379 4284 2.096367 CCTCGGTCATATCGTCGTAGTG 60.096 54.545 0.00 0.00 0.00 2.74
2380 4285 2.141517 CCTCGGTCATATCGTCGTAGT 58.858 52.381 0.00 0.00 0.00 2.73
2381 4286 2.096367 CACCTCGGTCATATCGTCGTAG 60.096 54.545 0.00 0.00 0.00 3.51
2382 4287 1.869132 CACCTCGGTCATATCGTCGTA 59.131 52.381 0.00 0.00 0.00 3.43
2383 4288 0.661552 CACCTCGGTCATATCGTCGT 59.338 55.000 0.00 0.00 0.00 4.34
2384 4289 0.661552 ACACCTCGGTCATATCGTCG 59.338 55.000 0.00 0.00 0.00 5.12
2385 4290 1.404391 ACACACCTCGGTCATATCGTC 59.596 52.381 0.00 0.00 0.00 4.20
2386 4291 1.471119 ACACACCTCGGTCATATCGT 58.529 50.000 0.00 0.00 0.00 3.73
2387 4292 2.579207 AACACACCTCGGTCATATCG 57.421 50.000 0.00 0.00 0.00 2.92
2388 4293 4.142227 ACAGTAACACACCTCGGTCATATC 60.142 45.833 0.00 0.00 0.00 1.63
2389 4294 3.767673 ACAGTAACACACCTCGGTCATAT 59.232 43.478 0.00 0.00 0.00 1.78
2390 4295 3.057104 CACAGTAACACACCTCGGTCATA 60.057 47.826 0.00 0.00 0.00 2.15
2391 4296 1.968493 ACAGTAACACACCTCGGTCAT 59.032 47.619 0.00 0.00 0.00 3.06
2392 4297 1.067974 CACAGTAACACACCTCGGTCA 59.932 52.381 0.00 0.00 0.00 4.02
2393 4298 1.604693 CCACAGTAACACACCTCGGTC 60.605 57.143 0.00 0.00 0.00 4.79
2394 4299 0.391597 CCACAGTAACACACCTCGGT 59.608 55.000 0.00 0.00 0.00 4.69
2395 4300 0.677288 TCCACAGTAACACACCTCGG 59.323 55.000 0.00 0.00 0.00 4.63
2396 4301 1.336887 CCTCCACAGTAACACACCTCG 60.337 57.143 0.00 0.00 0.00 4.63
2397 4302 1.002087 CCCTCCACAGTAACACACCTC 59.998 57.143 0.00 0.00 0.00 3.85
2398 4303 1.056660 CCCTCCACAGTAACACACCT 58.943 55.000 0.00 0.00 0.00 4.00
2399 4304 0.036306 CCCCTCCACAGTAACACACC 59.964 60.000 0.00 0.00 0.00 4.16
2400 4305 0.036306 CCCCCTCCACAGTAACACAC 59.964 60.000 0.00 0.00 0.00 3.82
2401 4306 2.458892 CCCCCTCCACAGTAACACA 58.541 57.895 0.00 0.00 0.00 3.72
2425 4330 1.797025 AGTTTCTCTTAGCCGTGTGC 58.203 50.000 0.00 0.00 41.71 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.