Multiple sequence alignment - TraesCS7A01G077300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G077300 chr7A 100.000 4514 0 0 1 4514 42457152 42452639 0.000000e+00 8336
1 TraesCS7A01G077300 chr7A 78.347 2480 445 47 1052 3506 16721442 16719030 0.000000e+00 1520
2 TraesCS7A01G077300 chr7A 81.147 907 130 27 2523 3425 580655802 580654933 0.000000e+00 689
3 TraesCS7A01G077300 chr7A 88.066 486 34 7 1 465 731311055 731310573 5.100000e-154 555
4 TraesCS7A01G077300 chr7D 95.420 3537 133 9 1006 4514 42802452 42798917 0.000000e+00 5607
5 TraesCS7A01G077300 chr7D 80.681 911 127 33 2523 3425 509699297 509700166 0.000000e+00 662
6 TraesCS7A01G077300 chr7D 79.648 909 133 37 2526 3425 509836601 509835736 1.390000e-169 606
7 TraesCS7A01G077300 chr7D 89.562 479 35 9 1 465 530001184 530001661 1.080000e-165 593
8 TraesCS7A01G077300 chr7D 76.766 1076 183 34 1052 2116 17399740 17398721 1.430000e-149 540
9 TraesCS7A01G077300 chr7D 85.387 349 35 7 466 813 42802921 42802588 9.290000e-92 348
10 TraesCS7A01G077300 chr7D 93.130 131 8 1 336 465 529996061 529996191 1.660000e-44 191
11 TraesCS7A01G077300 chr4A 93.506 2587 145 9 1006 3580 650314358 650311783 0.000000e+00 3825
12 TraesCS7A01G077300 chr4A 87.895 1140 134 2 2382 3518 740178614 740179752 0.000000e+00 1338
13 TraesCS7A01G077300 chr4A 87.012 1101 138 5 2420 3518 739762060 739763157 0.000000e+00 1236
14 TraesCS7A01G077300 chr4A 82.778 1051 135 26 1052 2085 740177587 740178608 0.000000e+00 896
15 TraesCS7A01G077300 chr4A 87.604 718 83 6 2863 3580 650291133 650290422 0.000000e+00 828
16 TraesCS7A01G077300 chr4A 92.105 114 9 0 683 796 650320344 650320457 1.300000e-35 161
17 TraesCS7A01G077300 chr3B 79.984 2478 385 69 1062 3511 70310882 70313276 0.000000e+00 1725
18 TraesCS7A01G077300 chr3B 81.208 149 23 4 327 472 119967761 119967615 1.030000e-21 115
19 TraesCS7A01G077300 chr7B 81.429 910 122 30 2523 3425 538206530 538205661 0.000000e+00 701
20 TraesCS7A01G077300 chr7B 86.680 488 39 12 1 465 59613303 59612819 6.690000e-143 518
21 TraesCS7A01G077300 chr5D 90.167 478 33 8 1 465 408385527 408386003 1.070000e-170 610
22 TraesCS7A01G077300 chr1D 90.167 478 33 8 1 465 481826192 481826668 1.070000e-170 610
23 TraesCS7A01G077300 chr1D 89.331 478 37 8 1 465 356938530 356938054 5.030000e-164 588
24 TraesCS7A01G077300 chr1D 79.402 301 45 11 4226 4514 22969891 22969596 3.560000e-46 196
25 TraesCS7A01G077300 chr5A 82.891 678 98 11 3850 4514 705809875 705809203 1.080000e-165 593
26 TraesCS7A01G077300 chr5A 91.429 105 9 0 327 431 513398244 513398140 1.310000e-30 145
27 TraesCS7A01G077300 chrUn 82.244 704 108 10 3824 4514 351661054 351660355 3.890000e-165 592
28 TraesCS7A01G077300 chr3D 89.144 479 34 9 1 466 561718138 561717665 8.420000e-162 580
29 TraesCS7A01G077300 chr3D 88.742 151 11 5 318 465 61222059 61222206 3.590000e-41 180
30 TraesCS7A01G077300 chr3D 87.838 148 12 5 321 465 61218282 61218426 7.770000e-38 169
31 TraesCS7A01G077300 chr2B 81.818 704 111 10 3824 4514 734040845 734041544 3.920000e-160 575
32 TraesCS7A01G077300 chr2B 80.878 706 116 12 3824 4514 799319447 799318746 5.140000e-149 538
33 TraesCS7A01G077300 chr6B 88.706 487 32 10 1 465 65095109 65094624 1.410000e-159 573
34 TraesCS7A01G077300 chr4B 82.485 668 99 11 3850 4504 665851295 665850633 1.820000e-158 569
35 TraesCS7A01G077300 chr6D 87.800 500 38 9 1 478 162277731 162277233 8.480000e-157 564
36 TraesCS7A01G077300 chr6D 80.959 709 107 20 3824 4514 392643650 392642952 1.850000e-148 536
37 TraesCS7A01G077300 chr1A 88.296 487 35 8 1 465 359248640 359249126 8.480000e-157 564
38 TraesCS7A01G077300 chr1A 86.441 118 14 2 321 438 477347485 477347370 1.320000e-25 128
39 TraesCS7A01G077300 chr2A 87.295 488 38 6 1 465 544312982 544312496 1.850000e-148 536
40 TraesCS7A01G077300 chr6A 82.143 560 82 11 3969 4514 496350228 496349673 8.840000e-127 464
41 TraesCS7A01G077300 chr5B 78.864 440 67 16 4091 4514 390552838 390552409 1.600000e-69 274
42 TraesCS7A01G077300 chr5B 84.322 236 34 3 3871 4105 390693646 390693413 1.260000e-55 228
43 TraesCS7A01G077300 chr3A 89.655 145 15 0 321 465 365946048 365945904 7.710000e-43 185


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G077300 chr7A 42452639 42457152 4513 True 8336.0 8336 100.0000 1 4514 1 chr7A.!!$R2 4513
1 TraesCS7A01G077300 chr7A 16719030 16721442 2412 True 1520.0 1520 78.3470 1052 3506 1 chr7A.!!$R1 2454
2 TraesCS7A01G077300 chr7A 580654933 580655802 869 True 689.0 689 81.1470 2523 3425 1 chr7A.!!$R3 902
3 TraesCS7A01G077300 chr7D 42798917 42802921 4004 True 2977.5 5607 90.4035 466 4514 2 chr7D.!!$R3 4048
4 TraesCS7A01G077300 chr7D 509699297 509700166 869 False 662.0 662 80.6810 2523 3425 1 chr7D.!!$F1 902
5 TraesCS7A01G077300 chr7D 509835736 509836601 865 True 606.0 606 79.6480 2526 3425 1 chr7D.!!$R2 899
6 TraesCS7A01G077300 chr7D 17398721 17399740 1019 True 540.0 540 76.7660 1052 2116 1 chr7D.!!$R1 1064
7 TraesCS7A01G077300 chr4A 650311783 650314358 2575 True 3825.0 3825 93.5060 1006 3580 1 chr4A.!!$R2 2574
8 TraesCS7A01G077300 chr4A 739762060 739763157 1097 False 1236.0 1236 87.0120 2420 3518 1 chr4A.!!$F2 1098
9 TraesCS7A01G077300 chr4A 740177587 740179752 2165 False 1117.0 1338 85.3365 1052 3518 2 chr4A.!!$F3 2466
10 TraesCS7A01G077300 chr4A 650290422 650291133 711 True 828.0 828 87.6040 2863 3580 1 chr4A.!!$R1 717
11 TraesCS7A01G077300 chr3B 70310882 70313276 2394 False 1725.0 1725 79.9840 1062 3511 1 chr3B.!!$F1 2449
12 TraesCS7A01G077300 chr7B 538205661 538206530 869 True 701.0 701 81.4290 2523 3425 1 chr7B.!!$R2 902
13 TraesCS7A01G077300 chr5A 705809203 705809875 672 True 593.0 593 82.8910 3850 4514 1 chr5A.!!$R2 664
14 TraesCS7A01G077300 chrUn 351660355 351661054 699 True 592.0 592 82.2440 3824 4514 1 chrUn.!!$R1 690
15 TraesCS7A01G077300 chr2B 734040845 734041544 699 False 575.0 575 81.8180 3824 4514 1 chr2B.!!$F1 690
16 TraesCS7A01G077300 chr2B 799318746 799319447 701 True 538.0 538 80.8780 3824 4514 1 chr2B.!!$R1 690
17 TraesCS7A01G077300 chr4B 665850633 665851295 662 True 569.0 569 82.4850 3850 4504 1 chr4B.!!$R1 654
18 TraesCS7A01G077300 chr6D 392642952 392643650 698 True 536.0 536 80.9590 3824 4514 1 chr6D.!!$R2 690
19 TraesCS7A01G077300 chr6A 496349673 496350228 555 True 464.0 464 82.1430 3969 4514 1 chr6A.!!$R1 545

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
432 433 0.041090 AAGGGGGCCTGTAACCATTG 59.959 55.0 0.84 0.00 32.13 2.82 F
951 961 0.248289 TAAGGTAACGGCCAGAGCAC 59.752 55.0 2.24 0.00 42.56 4.40 F
973 983 0.305922 AGTACGTACGCGCTGATACC 59.694 55.0 19.49 0.00 42.83 2.73 F
974 984 0.305922 GTACGTACGCGCTGATACCT 59.694 55.0 16.72 0.00 42.83 3.08 F
2359 2399 0.388907 CAAAGTGCGCAAGGGGAATG 60.389 55.0 14.00 0.51 38.28 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2359 2399 0.179081 GGTCCATCCGTGTAAGGAGC 60.179 60.000 0.0 0.0 44.55 4.70 R
2544 2599 1.127567 TGGTGGCTTGGTGTAGCTCT 61.128 55.000 0.0 0.0 40.99 4.09 R
3213 3272 2.873472 GACCGTCTCATCGTCATCTACT 59.127 50.000 0.0 0.0 0.00 2.57 R
3318 3380 1.634459 TCTACCTTCTCCACGTCCTCT 59.366 52.381 0.0 0.0 0.00 3.69 R
3848 3921 0.389948 GACTAAGGTGCCACAGTCCG 60.390 60.000 0.0 0.0 32.93 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.909550 ACAACCTTGCTGATTTATTTACCA 57.090 33.333 0.00 0.00 0.00 3.25
24 25 7.296628 ACAACCTTGCTGATTTATTTACCAA 57.703 32.000 0.00 0.00 0.00 3.67
25 26 7.378181 ACAACCTTGCTGATTTATTTACCAAG 58.622 34.615 0.00 0.00 0.00 3.61
26 27 7.015195 ACAACCTTGCTGATTTATTTACCAAGT 59.985 33.333 0.00 0.00 0.00 3.16
27 28 7.158099 ACCTTGCTGATTTATTTACCAAGTC 57.842 36.000 0.00 0.00 0.00 3.01
28 29 6.948309 ACCTTGCTGATTTATTTACCAAGTCT 59.052 34.615 0.00 0.00 0.00 3.24
29 30 7.121315 ACCTTGCTGATTTATTTACCAAGTCTC 59.879 37.037 0.00 0.00 0.00 3.36
30 31 7.337942 CCTTGCTGATTTATTTACCAAGTCTCT 59.662 37.037 0.00 0.00 0.00 3.10
31 32 9.383519 CTTGCTGATTTATTTACCAAGTCTCTA 57.616 33.333 0.00 0.00 0.00 2.43
32 33 8.718102 TGCTGATTTATTTACCAAGTCTCTAC 57.282 34.615 0.00 0.00 0.00 2.59
33 34 7.769044 TGCTGATTTATTTACCAAGTCTCTACC 59.231 37.037 0.00 0.00 0.00 3.18
34 35 7.769044 GCTGATTTATTTACCAAGTCTCTACCA 59.231 37.037 0.00 0.00 0.00 3.25
35 36 9.667107 CTGATTTATTTACCAAGTCTCTACCAA 57.333 33.333 0.00 0.00 0.00 3.67
43 44 9.629878 TTTACCAAGTCTCTACCAAAATTTACA 57.370 29.630 0.00 0.00 0.00 2.41
44 45 9.802039 TTACCAAGTCTCTACCAAAATTTACAT 57.198 29.630 0.00 0.00 0.00 2.29
45 46 8.706322 ACCAAGTCTCTACCAAAATTTACATT 57.294 30.769 0.00 0.00 0.00 2.71
46 47 8.793592 ACCAAGTCTCTACCAAAATTTACATTC 58.206 33.333 0.00 0.00 0.00 2.67
47 48 8.244113 CCAAGTCTCTACCAAAATTTACATTCC 58.756 37.037 0.00 0.00 0.00 3.01
48 49 8.792633 CAAGTCTCTACCAAAATTTACATTCCA 58.207 33.333 0.00 0.00 0.00 3.53
49 50 8.567285 AGTCTCTACCAAAATTTACATTCCAG 57.433 34.615 0.00 0.00 0.00 3.86
50 51 8.383175 AGTCTCTACCAAAATTTACATTCCAGA 58.617 33.333 0.00 0.00 0.00 3.86
51 52 9.010029 GTCTCTACCAAAATTTACATTCCAGAA 57.990 33.333 0.00 0.00 0.00 3.02
52 53 9.581289 TCTCTACCAAAATTTACATTCCAGAAA 57.419 29.630 0.00 0.00 0.00 2.52
64 65 5.648178 CATTCCAGAAATGTGTTCATGGA 57.352 39.130 0.00 0.00 40.00 3.41
65 66 6.028146 CATTCCAGAAATGTGTTCATGGAA 57.972 37.500 15.77 15.77 40.00 3.53
66 67 6.636705 CATTCCAGAAATGTGTTCATGGAAT 58.363 36.000 17.65 17.65 40.53 3.01
67 68 6.669125 TTCCAGAAATGTGTTCATGGAATT 57.331 33.333 12.19 0.00 31.73 2.17
68 69 6.028146 TCCAGAAATGTGTTCATGGAATTG 57.972 37.500 0.00 0.00 34.19 2.32
69 70 5.047164 TCCAGAAATGTGTTCATGGAATTGG 60.047 40.000 0.00 0.00 34.19 3.16
70 71 5.279607 CCAGAAATGTGTTCATGGAATTGGT 60.280 40.000 0.00 0.00 34.19 3.67
71 72 6.071447 CCAGAAATGTGTTCATGGAATTGGTA 60.071 38.462 0.00 0.00 34.19 3.25
72 73 7.364056 CCAGAAATGTGTTCATGGAATTGGTAT 60.364 37.037 0.00 0.00 34.19 2.73
73 74 7.490079 CAGAAATGTGTTCATGGAATTGGTATG 59.510 37.037 0.00 0.00 34.19 2.39
74 75 6.855763 AATGTGTTCATGGAATTGGTATGT 57.144 33.333 0.00 0.00 34.19 2.29
75 76 5.641783 TGTGTTCATGGAATTGGTATGTG 57.358 39.130 0.00 0.00 0.00 3.21
76 77 5.320277 TGTGTTCATGGAATTGGTATGTGA 58.680 37.500 0.00 0.00 0.00 3.58
77 78 5.772169 TGTGTTCATGGAATTGGTATGTGAA 59.228 36.000 0.00 0.00 0.00 3.18
78 79 6.072008 TGTGTTCATGGAATTGGTATGTGAAG 60.072 38.462 0.00 0.00 0.00 3.02
79 80 6.150976 GTGTTCATGGAATTGGTATGTGAAGA 59.849 38.462 0.00 0.00 0.00 2.87
80 81 6.150976 TGTTCATGGAATTGGTATGTGAAGAC 59.849 38.462 0.00 0.00 0.00 3.01
81 82 6.065976 TCATGGAATTGGTATGTGAAGACT 57.934 37.500 0.00 0.00 0.00 3.24
82 83 6.484288 TCATGGAATTGGTATGTGAAGACTT 58.516 36.000 0.00 0.00 0.00 3.01
83 84 7.629157 TCATGGAATTGGTATGTGAAGACTTA 58.371 34.615 0.00 0.00 0.00 2.24
84 85 7.770433 TCATGGAATTGGTATGTGAAGACTTAG 59.230 37.037 0.00 0.00 0.00 2.18
85 86 6.414732 TGGAATTGGTATGTGAAGACTTAGG 58.585 40.000 0.00 0.00 0.00 2.69
86 87 5.823045 GGAATTGGTATGTGAAGACTTAGGG 59.177 44.000 0.00 0.00 0.00 3.53
87 88 6.352737 GGAATTGGTATGTGAAGACTTAGGGA 60.353 42.308 0.00 0.00 0.00 4.20
88 89 5.416271 TTGGTATGTGAAGACTTAGGGAC 57.584 43.478 0.00 0.00 0.00 4.46
89 90 4.684724 TGGTATGTGAAGACTTAGGGACT 58.315 43.478 0.00 0.00 46.37 3.85
90 91 5.091552 TGGTATGTGAAGACTTAGGGACTT 58.908 41.667 0.00 0.00 41.75 3.01
91 92 5.046591 TGGTATGTGAAGACTTAGGGACTTG 60.047 44.000 0.00 0.00 41.75 3.16
92 93 3.402628 TGTGAAGACTTAGGGACTTGC 57.597 47.619 0.00 0.00 41.75 4.01
93 94 2.703536 TGTGAAGACTTAGGGACTTGCA 59.296 45.455 0.00 0.00 41.75 4.08
94 95 3.244215 TGTGAAGACTTAGGGACTTGCAG 60.244 47.826 0.00 0.00 41.75 4.41
95 96 2.303022 TGAAGACTTAGGGACTTGCAGG 59.697 50.000 0.00 0.00 41.75 4.85
96 97 2.031495 AGACTTAGGGACTTGCAGGT 57.969 50.000 0.00 0.00 41.75 4.00
97 98 1.625818 AGACTTAGGGACTTGCAGGTG 59.374 52.381 6.05 0.00 41.75 4.00
98 99 1.348036 GACTTAGGGACTTGCAGGTGT 59.652 52.381 6.05 0.00 41.75 4.16
99 100 1.348036 ACTTAGGGACTTGCAGGTGTC 59.652 52.381 6.05 7.11 41.75 3.67
100 101 1.347707 CTTAGGGACTTGCAGGTGTCA 59.652 52.381 6.05 0.00 41.75 3.58
101 102 0.976641 TAGGGACTTGCAGGTGTCAG 59.023 55.000 6.05 0.00 41.75 3.51
102 103 1.302832 GGGACTTGCAGGTGTCAGG 60.303 63.158 6.05 0.00 35.11 3.86
103 104 1.302832 GGACTTGCAGGTGTCAGGG 60.303 63.158 6.05 0.00 35.11 4.45
104 105 1.302832 GACTTGCAGGTGTCAGGGG 60.303 63.158 6.05 0.00 33.75 4.79
105 106 2.034687 CTTGCAGGTGTCAGGGGG 59.965 66.667 0.00 0.00 0.00 5.40
106 107 2.449518 TTGCAGGTGTCAGGGGGA 60.450 61.111 0.00 0.00 0.00 4.81
107 108 2.475371 CTTGCAGGTGTCAGGGGGAG 62.475 65.000 0.00 0.00 0.00 4.30
108 109 2.930562 GCAGGTGTCAGGGGGAGT 60.931 66.667 0.00 0.00 0.00 3.85
109 110 2.960688 GCAGGTGTCAGGGGGAGTC 61.961 68.421 0.00 0.00 0.00 3.36
110 111 1.229336 CAGGTGTCAGGGGGAGTCT 60.229 63.158 0.00 0.00 0.00 3.24
111 112 1.079438 AGGTGTCAGGGGGAGTCTC 59.921 63.158 0.00 0.00 0.00 3.36
112 113 1.079438 GGTGTCAGGGGGAGTCTCT 59.921 63.158 0.00 0.00 0.00 3.10
113 114 0.545548 GGTGTCAGGGGGAGTCTCTT 60.546 60.000 0.00 0.00 0.00 2.85
114 115 0.899019 GTGTCAGGGGGAGTCTCTTC 59.101 60.000 0.00 0.00 0.00 2.87
115 116 0.787084 TGTCAGGGGGAGTCTCTTCT 59.213 55.000 0.00 0.00 0.00 2.85
116 117 1.150135 TGTCAGGGGGAGTCTCTTCTT 59.850 52.381 0.00 0.00 0.00 2.52
117 118 1.552792 GTCAGGGGGAGTCTCTTCTTG 59.447 57.143 0.00 0.04 0.00 3.02
118 119 1.433199 TCAGGGGGAGTCTCTTCTTGA 59.567 52.381 0.00 2.34 0.00 3.02
119 120 2.158158 TCAGGGGGAGTCTCTTCTTGAA 60.158 50.000 0.00 0.00 0.00 2.69
120 121 2.639839 CAGGGGGAGTCTCTTCTTGAAA 59.360 50.000 0.00 0.00 0.00 2.69
121 122 3.265479 CAGGGGGAGTCTCTTCTTGAAAT 59.735 47.826 0.00 0.00 0.00 2.17
122 123 4.471386 CAGGGGGAGTCTCTTCTTGAAATA 59.529 45.833 0.00 0.00 0.00 1.40
123 124 5.131809 CAGGGGGAGTCTCTTCTTGAAATAT 59.868 44.000 0.00 0.00 0.00 1.28
124 125 5.368230 AGGGGGAGTCTCTTCTTGAAATATC 59.632 44.000 0.00 0.00 0.00 1.63
125 126 5.455469 GGGGGAGTCTCTTCTTGAAATATCC 60.455 48.000 0.00 0.00 0.00 2.59
126 127 5.368230 GGGGAGTCTCTTCTTGAAATATCCT 59.632 44.000 0.00 0.00 0.00 3.24
127 128 6.463755 GGGGAGTCTCTTCTTGAAATATCCTC 60.464 46.154 0.00 0.00 0.00 3.71
128 129 6.098982 GGGAGTCTCTTCTTGAAATATCCTCA 59.901 42.308 0.00 0.00 0.00 3.86
129 130 7.202084 GGGAGTCTCTTCTTGAAATATCCTCAT 60.202 40.741 0.00 0.00 0.00 2.90
130 131 8.210265 GGAGTCTCTTCTTGAAATATCCTCATT 58.790 37.037 0.00 0.00 0.00 2.57
131 132 9.612066 GAGTCTCTTCTTGAAATATCCTCATTT 57.388 33.333 0.00 0.00 0.00 2.32
132 133 9.972106 AGTCTCTTCTTGAAATATCCTCATTTT 57.028 29.630 0.00 0.00 0.00 1.82
179 180 9.219603 TCTTTCTTTGTGAGTATATGTTTCAGG 57.780 33.333 0.00 0.00 0.00 3.86
180 181 9.219603 CTTTCTTTGTGAGTATATGTTTCAGGA 57.780 33.333 0.00 0.00 0.00 3.86
181 182 9.739276 TTTCTTTGTGAGTATATGTTTCAGGAT 57.261 29.630 0.00 0.00 0.00 3.24
182 183 8.948631 TCTTTGTGAGTATATGTTTCAGGATC 57.051 34.615 0.00 0.00 0.00 3.36
183 184 8.762645 TCTTTGTGAGTATATGTTTCAGGATCT 58.237 33.333 0.00 0.00 0.00 2.75
184 185 8.948631 TTTGTGAGTATATGTTTCAGGATCTC 57.051 34.615 0.00 0.00 0.00 2.75
185 186 7.660030 TGTGAGTATATGTTTCAGGATCTCA 57.340 36.000 0.00 0.00 0.00 3.27
186 187 8.255111 TGTGAGTATATGTTTCAGGATCTCAT 57.745 34.615 0.00 0.00 33.22 2.90
187 188 8.363390 TGTGAGTATATGTTTCAGGATCTCATC 58.637 37.037 0.00 0.00 33.22 2.92
188 189 8.363390 GTGAGTATATGTTTCAGGATCTCATCA 58.637 37.037 0.00 0.00 33.22 3.07
189 190 8.927411 TGAGTATATGTTTCAGGATCTCATCAA 58.073 33.333 0.00 0.00 0.00 2.57
190 191 9.770097 GAGTATATGTTTCAGGATCTCATCAAA 57.230 33.333 0.00 0.00 0.00 2.69
221 222 9.799106 TTATGAAGAACTTTTGAAGGAGAATCT 57.201 29.630 0.00 0.00 33.73 2.40
222 223 8.703378 ATGAAGAACTTTTGAAGGAGAATCTT 57.297 30.769 0.00 0.00 33.73 2.40
223 224 8.525290 TGAAGAACTTTTGAAGGAGAATCTTT 57.475 30.769 0.00 0.00 36.99 2.52
224 225 8.971073 TGAAGAACTTTTGAAGGAGAATCTTTT 58.029 29.630 0.00 0.00 33.07 2.27
225 226 9.242477 GAAGAACTTTTGAAGGAGAATCTTTTG 57.758 33.333 0.00 0.00 33.07 2.44
226 227 8.525290 AGAACTTTTGAAGGAGAATCTTTTGA 57.475 30.769 0.00 0.00 33.07 2.69
227 228 8.628280 AGAACTTTTGAAGGAGAATCTTTTGAG 58.372 33.333 0.00 0.00 33.07 3.02
228 229 8.525290 AACTTTTGAAGGAGAATCTTTTGAGA 57.475 30.769 0.00 0.00 33.07 3.27
229 230 8.703378 ACTTTTGAAGGAGAATCTTTTGAGAT 57.297 30.769 0.00 0.00 33.07 2.75
230 231 8.574737 ACTTTTGAAGGAGAATCTTTTGAGATG 58.425 33.333 0.00 0.00 33.07 2.90
231 232 8.696043 TTTTGAAGGAGAATCTTTTGAGATGA 57.304 30.769 0.00 0.00 33.07 2.92
232 233 8.874744 TTTGAAGGAGAATCTTTTGAGATGAT 57.125 30.769 0.00 0.00 33.07 2.45
233 234 9.964354 TTTGAAGGAGAATCTTTTGAGATGATA 57.036 29.630 0.00 0.00 33.07 2.15
234 235 9.610705 TTGAAGGAGAATCTTTTGAGATGATAG 57.389 33.333 0.00 0.00 33.07 2.08
235 236 8.985922 TGAAGGAGAATCTTTTGAGATGATAGA 58.014 33.333 0.00 0.00 33.07 1.98
236 237 9.829507 GAAGGAGAATCTTTTGAGATGATAGAA 57.170 33.333 0.00 0.00 33.07 2.10
237 238 9.612066 AAGGAGAATCTTTTGAGATGATAGAAC 57.388 33.333 0.00 0.00 25.05 3.01
238 239 8.210265 AGGAGAATCTTTTGAGATGATAGAACC 58.790 37.037 0.00 0.00 33.73 3.62
239 240 8.210265 GGAGAATCTTTTGAGATGATAGAACCT 58.790 37.037 0.00 0.00 33.73 3.50
240 241 9.260002 GAGAATCTTTTGAGATGATAGAACCTC 57.740 37.037 0.00 0.00 0.00 3.85
241 242 8.210265 AGAATCTTTTGAGATGATAGAACCTCC 58.790 37.037 0.00 0.00 0.00 4.30
242 243 7.688918 ATCTTTTGAGATGATAGAACCTCCT 57.311 36.000 0.00 0.00 0.00 3.69
243 244 6.882656 TCTTTTGAGATGATAGAACCTCCTG 58.117 40.000 0.00 0.00 0.00 3.86
244 245 6.669591 TCTTTTGAGATGATAGAACCTCCTGA 59.330 38.462 0.00 0.00 0.00 3.86
245 246 6.874278 TTTGAGATGATAGAACCTCCTGAA 57.126 37.500 0.00 0.00 0.00 3.02
246 247 5.860941 TGAGATGATAGAACCTCCTGAAC 57.139 43.478 0.00 0.00 0.00 3.18
247 248 5.272402 TGAGATGATAGAACCTCCTGAACA 58.728 41.667 0.00 0.00 0.00 3.18
248 249 5.721480 TGAGATGATAGAACCTCCTGAACAA 59.279 40.000 0.00 0.00 0.00 2.83
249 250 6.385176 TGAGATGATAGAACCTCCTGAACAAT 59.615 38.462 0.00 0.00 0.00 2.71
250 251 7.565029 TGAGATGATAGAACCTCCTGAACAATA 59.435 37.037 0.00 0.00 0.00 1.90
251 252 7.961351 AGATGATAGAACCTCCTGAACAATAG 58.039 38.462 0.00 0.00 0.00 1.73
252 253 7.566879 AGATGATAGAACCTCCTGAACAATAGT 59.433 37.037 0.00 0.00 0.00 2.12
253 254 6.878317 TGATAGAACCTCCTGAACAATAGTG 58.122 40.000 0.00 0.00 0.00 2.74
254 255 6.667848 TGATAGAACCTCCTGAACAATAGTGA 59.332 38.462 0.00 0.00 0.00 3.41
255 256 5.825593 AGAACCTCCTGAACAATAGTGAA 57.174 39.130 0.00 0.00 0.00 3.18
256 257 5.799213 AGAACCTCCTGAACAATAGTGAAG 58.201 41.667 0.00 0.00 0.00 3.02
257 258 5.544176 AGAACCTCCTGAACAATAGTGAAGA 59.456 40.000 0.00 0.00 0.00 2.87
258 259 6.214412 AGAACCTCCTGAACAATAGTGAAGAT 59.786 38.462 0.00 0.00 0.00 2.40
259 260 5.738909 ACCTCCTGAACAATAGTGAAGATG 58.261 41.667 0.00 0.00 0.00 2.90
260 261 5.485353 ACCTCCTGAACAATAGTGAAGATGA 59.515 40.000 0.00 0.00 0.00 2.92
261 262 6.157645 ACCTCCTGAACAATAGTGAAGATGAT 59.842 38.462 0.00 0.00 0.00 2.45
262 263 6.705381 CCTCCTGAACAATAGTGAAGATGATC 59.295 42.308 0.00 0.00 0.00 2.92
263 264 7.418827 CCTCCTGAACAATAGTGAAGATGATCT 60.419 40.741 0.00 0.00 0.00 2.75
264 265 8.539117 TCCTGAACAATAGTGAAGATGATCTA 57.461 34.615 0.00 0.00 0.00 1.98
265 266 8.417106 TCCTGAACAATAGTGAAGATGATCTAC 58.583 37.037 0.00 0.00 0.00 2.59
266 267 8.200120 CCTGAACAATAGTGAAGATGATCTACA 58.800 37.037 0.00 0.00 0.00 2.74
267 268 9.761504 CTGAACAATAGTGAAGATGATCTACAT 57.238 33.333 0.00 0.00 42.47 2.29
268 269 9.538508 TGAACAATAGTGAAGATGATCTACATG 57.461 33.333 0.00 0.00 39.56 3.21
269 270 8.899427 AACAATAGTGAAGATGATCTACATGG 57.101 34.615 0.00 0.00 39.56 3.66
270 271 8.027524 ACAATAGTGAAGATGATCTACATGGT 57.972 34.615 0.00 0.00 39.56 3.55
271 272 8.147058 ACAATAGTGAAGATGATCTACATGGTC 58.853 37.037 0.00 0.00 39.56 4.02
272 273 5.543507 AGTGAAGATGATCTACATGGTCC 57.456 43.478 0.00 0.00 39.56 4.46
273 274 4.964897 AGTGAAGATGATCTACATGGTCCA 59.035 41.667 0.00 0.00 39.56 4.02
274 275 5.070180 AGTGAAGATGATCTACATGGTCCAG 59.930 44.000 0.00 0.00 39.56 3.86
275 276 4.202295 TGAAGATGATCTACATGGTCCAGC 60.202 45.833 0.00 0.00 39.56 4.85
276 277 2.636893 AGATGATCTACATGGTCCAGCC 59.363 50.000 0.00 0.00 39.56 4.85
277 278 2.180946 TGATCTACATGGTCCAGCCT 57.819 50.000 0.00 0.00 38.35 4.58
278 279 3.328535 TGATCTACATGGTCCAGCCTA 57.671 47.619 0.00 0.00 38.35 3.93
279 280 3.234353 TGATCTACATGGTCCAGCCTAG 58.766 50.000 0.00 0.00 38.35 3.02
280 281 3.117131 TGATCTACATGGTCCAGCCTAGA 60.117 47.826 0.00 1.83 38.35 2.43
281 282 3.619900 TCTACATGGTCCAGCCTAGAT 57.380 47.619 0.00 0.00 38.35 1.98
282 283 3.928754 TCTACATGGTCCAGCCTAGATT 58.071 45.455 0.00 0.00 38.35 2.40
283 284 5.074746 TCTACATGGTCCAGCCTAGATTA 57.925 43.478 0.00 0.00 38.35 1.75
284 285 5.080337 TCTACATGGTCCAGCCTAGATTAG 58.920 45.833 0.00 0.00 38.35 1.73
286 287 2.103153 TGGTCCAGCCTAGATTAGGG 57.897 55.000 4.43 0.00 46.32 3.53
287 288 1.353091 GGTCCAGCCTAGATTAGGGG 58.647 60.000 4.43 0.00 46.32 4.79
288 289 1.353091 GTCCAGCCTAGATTAGGGGG 58.647 60.000 4.43 0.00 46.32 5.40
289 290 1.132817 GTCCAGCCTAGATTAGGGGGA 60.133 57.143 4.43 0.00 46.32 4.81
290 291 1.150135 TCCAGCCTAGATTAGGGGGAG 59.850 57.143 4.43 0.00 46.32 4.30
291 292 1.132689 CCAGCCTAGATTAGGGGGAGT 60.133 57.143 4.43 0.00 46.32 3.85
292 293 1.974236 CAGCCTAGATTAGGGGGAGTG 59.026 57.143 4.43 0.00 46.32 3.51
293 294 1.581149 AGCCTAGATTAGGGGGAGTGT 59.419 52.381 4.43 0.00 46.32 3.55
294 295 2.021936 AGCCTAGATTAGGGGGAGTGTT 60.022 50.000 4.43 0.00 46.32 3.32
295 296 3.209152 AGCCTAGATTAGGGGGAGTGTTA 59.791 47.826 4.43 0.00 46.32 2.41
296 297 3.971971 GCCTAGATTAGGGGGAGTGTTAA 59.028 47.826 4.43 0.00 46.32 2.01
297 298 4.040584 GCCTAGATTAGGGGGAGTGTTAAG 59.959 50.000 4.43 0.00 46.32 1.85
298 299 5.464984 CCTAGATTAGGGGGAGTGTTAAGA 58.535 45.833 0.00 0.00 42.42 2.10
299 300 5.304871 CCTAGATTAGGGGGAGTGTTAAGAC 59.695 48.000 0.00 0.00 42.42 3.01
300 301 4.961585 AGATTAGGGGGAGTGTTAAGACT 58.038 43.478 4.69 4.69 0.00 3.24
301 302 6.101274 AGATTAGGGGGAGTGTTAAGACTA 57.899 41.667 5.06 0.00 0.00 2.59
302 303 6.509386 AGATTAGGGGGAGTGTTAAGACTAA 58.491 40.000 5.06 0.00 0.00 2.24
303 304 7.140304 AGATTAGGGGGAGTGTTAAGACTAAT 58.860 38.462 5.06 0.83 33.88 1.73
304 305 7.628101 AGATTAGGGGGAGTGTTAAGACTAATT 59.372 37.037 5.06 0.00 32.02 1.40
305 306 5.695424 AGGGGGAGTGTTAAGACTAATTC 57.305 43.478 5.06 0.00 0.00 2.17
306 307 5.351405 AGGGGGAGTGTTAAGACTAATTCT 58.649 41.667 5.06 0.00 35.32 2.40
307 308 5.189934 AGGGGGAGTGTTAAGACTAATTCTG 59.810 44.000 5.06 0.00 33.46 3.02
308 309 5.045797 GGGGGAGTGTTAAGACTAATTCTGT 60.046 44.000 5.06 0.00 33.46 3.41
309 310 6.155737 GGGGGAGTGTTAAGACTAATTCTGTA 59.844 42.308 5.06 0.00 33.46 2.74
310 311 7.310858 GGGGGAGTGTTAAGACTAATTCTGTAA 60.311 40.741 5.06 0.00 33.46 2.41
311 312 7.548427 GGGGAGTGTTAAGACTAATTCTGTAAC 59.452 40.741 5.06 0.00 33.46 2.50
312 313 7.548427 GGGAGTGTTAAGACTAATTCTGTAACC 59.452 40.741 5.06 0.00 33.46 2.85
313 314 7.275123 GGAGTGTTAAGACTAATTCTGTAACCG 59.725 40.741 5.06 0.00 33.46 4.44
314 315 7.889469 AGTGTTAAGACTAATTCTGTAACCGA 58.111 34.615 2.91 0.00 33.46 4.69
315 316 7.811713 AGTGTTAAGACTAATTCTGTAACCGAC 59.188 37.037 2.91 0.00 33.46 4.79
316 317 6.803320 TGTTAAGACTAATTCTGTAACCGACG 59.197 38.462 0.00 0.00 33.46 5.12
317 318 3.767278 AGACTAATTCTGTAACCGACGC 58.233 45.455 0.00 0.00 31.12 5.19
318 319 2.856557 GACTAATTCTGTAACCGACGCC 59.143 50.000 0.00 0.00 0.00 5.68
319 320 2.494870 ACTAATTCTGTAACCGACGCCT 59.505 45.455 0.00 0.00 0.00 5.52
320 321 2.467566 AATTCTGTAACCGACGCCTT 57.532 45.000 0.00 0.00 0.00 4.35
321 322 2.005971 ATTCTGTAACCGACGCCTTC 57.994 50.000 0.00 0.00 0.00 3.46
333 334 2.228115 CGCCTTCGTTACGGTTTGT 58.772 52.632 4.53 0.00 0.00 2.83
334 335 0.162294 CGCCTTCGTTACGGTTTGTC 59.838 55.000 4.53 0.00 0.00 3.18
335 336 0.514255 GCCTTCGTTACGGTTTGTCC 59.486 55.000 4.53 0.00 0.00 4.02
336 337 1.150827 CCTTCGTTACGGTTTGTCCC 58.849 55.000 4.53 0.00 0.00 4.46
343 344 4.020378 CGGTTTGTCCCGCAACCG 62.020 66.667 9.08 9.08 41.78 4.44
344 345 2.592287 GGTTTGTCCCGCAACCGA 60.592 61.111 0.00 0.00 36.72 4.69
345 346 2.635338 GTTTGTCCCGCAACCGAC 59.365 61.111 0.00 0.00 36.72 4.79
346 347 2.968156 TTTGTCCCGCAACCGACG 60.968 61.111 0.00 0.00 36.72 5.12
354 355 2.668550 GCAACCGACGCCTTCCTT 60.669 61.111 0.00 0.00 0.00 3.36
355 356 2.677979 GCAACCGACGCCTTCCTTC 61.678 63.158 0.00 0.00 0.00 3.46
356 357 2.048503 AACCGACGCCTTCCTTCG 60.049 61.111 0.00 0.00 0.00 3.79
357 358 2.567497 AACCGACGCCTTCCTTCGA 61.567 57.895 0.00 0.00 34.62 3.71
358 359 1.885163 AACCGACGCCTTCCTTCGAT 61.885 55.000 0.00 0.00 34.62 3.59
359 360 1.589196 CCGACGCCTTCCTTCGATC 60.589 63.158 0.00 0.00 34.62 3.69
360 361 1.433879 CGACGCCTTCCTTCGATCT 59.566 57.895 0.00 0.00 34.62 2.75
361 362 0.592754 CGACGCCTTCCTTCGATCTC 60.593 60.000 0.00 0.00 34.62 2.75
362 363 0.249114 GACGCCTTCCTTCGATCTCC 60.249 60.000 0.00 0.00 0.00 3.71
363 364 0.684805 ACGCCTTCCTTCGATCTCCT 60.685 55.000 0.00 0.00 0.00 3.69
364 365 1.319541 CGCCTTCCTTCGATCTCCTA 58.680 55.000 0.00 0.00 0.00 2.94
365 366 1.268352 CGCCTTCCTTCGATCTCCTAG 59.732 57.143 0.00 0.00 0.00 3.02
366 367 2.588620 GCCTTCCTTCGATCTCCTAGA 58.411 52.381 0.00 0.00 0.00 2.43
367 368 2.959707 GCCTTCCTTCGATCTCCTAGAA 59.040 50.000 0.00 0.00 0.00 2.10
368 369 3.243602 GCCTTCCTTCGATCTCCTAGAAC 60.244 52.174 0.00 0.00 0.00 3.01
369 370 3.319689 CCTTCCTTCGATCTCCTAGAACC 59.680 52.174 0.00 0.00 0.00 3.62
370 371 2.573369 TCCTTCGATCTCCTAGAACCG 58.427 52.381 0.00 0.00 0.00 4.44
371 372 2.172082 TCCTTCGATCTCCTAGAACCGA 59.828 50.000 0.00 0.00 0.00 4.69
372 373 2.291190 CCTTCGATCTCCTAGAACCGAC 59.709 54.545 0.00 0.00 0.00 4.79
373 374 1.579698 TCGATCTCCTAGAACCGACG 58.420 55.000 0.00 0.00 0.00 5.12
374 375 0.041135 CGATCTCCTAGAACCGACGC 60.041 60.000 0.00 0.00 0.00 5.19
375 376 0.311477 GATCTCCTAGAACCGACGCC 59.689 60.000 0.00 0.00 0.00 5.68
376 377 1.108132 ATCTCCTAGAACCGACGCCC 61.108 60.000 0.00 0.00 0.00 6.13
377 378 2.757099 TCCTAGAACCGACGCCCC 60.757 66.667 0.00 0.00 0.00 5.80
378 379 3.846430 CCTAGAACCGACGCCCCC 61.846 72.222 0.00 0.00 0.00 5.40
379 380 2.758737 CTAGAACCGACGCCCCCT 60.759 66.667 0.00 0.00 0.00 4.79
380 381 2.757099 TAGAACCGACGCCCCCTC 60.757 66.667 0.00 0.00 0.00 4.30
381 382 3.588817 TAGAACCGACGCCCCCTCA 62.589 63.158 0.00 0.00 0.00 3.86
382 383 4.011517 GAACCGACGCCCCCTCAA 62.012 66.667 0.00 0.00 0.00 3.02
383 384 3.540367 GAACCGACGCCCCCTCAAA 62.540 63.158 0.00 0.00 0.00 2.69
384 385 3.546714 AACCGACGCCCCCTCAAAG 62.547 63.158 0.00 0.00 0.00 2.77
385 386 4.778143 CCGACGCCCCCTCAAAGG 62.778 72.222 0.00 0.00 34.30 3.11
386 387 3.702048 CGACGCCCCCTCAAAGGA 61.702 66.667 0.00 0.00 37.67 3.36
387 388 2.998949 GACGCCCCCTCAAAGGAT 59.001 61.111 0.00 0.00 37.67 3.24
388 389 1.153147 GACGCCCCCTCAAAGGATC 60.153 63.158 0.00 0.00 37.67 3.36
389 390 2.203070 CGCCCCCTCAAAGGATCG 60.203 66.667 0.00 0.00 37.67 3.69
390 391 2.517166 GCCCCCTCAAAGGATCGC 60.517 66.667 0.00 0.00 37.67 4.58
391 392 2.193248 CCCCCTCAAAGGATCGCC 59.807 66.667 0.00 0.00 37.67 5.54
392 393 2.203070 CCCCTCAAAGGATCGCCG 60.203 66.667 0.00 0.00 37.67 6.46
393 394 2.584608 CCCTCAAAGGATCGCCGT 59.415 61.111 0.00 0.00 37.67 5.68
394 395 1.815421 CCCTCAAAGGATCGCCGTG 60.815 63.158 0.00 0.00 37.67 4.94
395 396 1.079127 CCTCAAAGGATCGCCGTGT 60.079 57.895 0.00 0.00 37.67 4.49
396 397 1.084370 CCTCAAAGGATCGCCGTGTC 61.084 60.000 0.00 0.00 37.67 3.67
397 398 0.108615 CTCAAAGGATCGCCGTGTCT 60.109 55.000 0.00 0.00 39.96 3.41
398 399 0.108804 TCAAAGGATCGCCGTGTCTC 60.109 55.000 0.00 0.00 39.96 3.36
399 400 0.108615 CAAAGGATCGCCGTGTCTCT 60.109 55.000 0.00 0.00 39.96 3.10
400 401 0.608640 AAAGGATCGCCGTGTCTCTT 59.391 50.000 0.00 0.00 39.96 2.85
401 402 0.173708 AAGGATCGCCGTGTCTCTTC 59.826 55.000 0.00 0.00 39.96 2.87
402 403 1.586564 GGATCGCCGTGTCTCTTCG 60.587 63.158 0.00 0.00 0.00 3.79
404 405 2.938539 GATCGCCGTGTCTCTTCGGG 62.939 65.000 5.78 0.00 45.85 5.14
405 406 3.744719 CGCCGTGTCTCTTCGGGA 61.745 66.667 5.78 0.00 45.85 5.14
406 407 2.126031 GCCGTGTCTCTTCGGGAC 60.126 66.667 5.78 0.00 45.85 4.46
420 421 3.409201 GGGACGTATAAAAGGGGGC 57.591 57.895 0.00 0.00 0.00 5.80
421 422 0.179009 GGGACGTATAAAAGGGGGCC 60.179 60.000 0.00 0.00 0.00 5.80
422 423 0.841961 GGACGTATAAAAGGGGGCCT 59.158 55.000 0.84 0.00 33.87 5.19
423 424 1.476291 GGACGTATAAAAGGGGGCCTG 60.476 57.143 0.84 0.00 32.13 4.85
424 425 1.211212 GACGTATAAAAGGGGGCCTGT 59.789 52.381 0.84 0.00 32.13 4.00
425 426 2.435437 GACGTATAAAAGGGGGCCTGTA 59.565 50.000 0.84 0.00 32.13 2.74
426 427 2.845586 ACGTATAAAAGGGGGCCTGTAA 59.154 45.455 0.84 0.00 32.13 2.41
427 428 3.208594 CGTATAAAAGGGGGCCTGTAAC 58.791 50.000 0.84 0.00 32.13 2.50
428 429 2.840640 ATAAAAGGGGGCCTGTAACC 57.159 50.000 0.84 0.00 32.13 2.85
429 430 1.458017 TAAAAGGGGGCCTGTAACCA 58.542 50.000 0.84 0.00 32.13 3.67
430 431 0.790339 AAAAGGGGGCCTGTAACCAT 59.210 50.000 0.84 0.00 32.13 3.55
431 432 0.790339 AAAGGGGGCCTGTAACCATT 59.210 50.000 0.84 0.00 32.13 3.16
432 433 0.041090 AAGGGGGCCTGTAACCATTG 59.959 55.000 0.84 0.00 32.13 2.82
433 434 0.849094 AGGGGGCCTGTAACCATTGA 60.849 55.000 0.84 0.00 29.57 2.57
434 435 0.261696 GGGGGCCTGTAACCATTGAT 59.738 55.000 0.84 0.00 0.00 2.57
435 436 1.692411 GGGGCCTGTAACCATTGATC 58.308 55.000 0.84 0.00 0.00 2.92
436 437 1.064017 GGGGCCTGTAACCATTGATCA 60.064 52.381 0.84 0.00 0.00 2.92
437 438 2.622977 GGGGCCTGTAACCATTGATCAA 60.623 50.000 11.26 11.26 0.00 2.57
438 439 3.299503 GGGCCTGTAACCATTGATCAAT 58.700 45.455 15.36 15.36 0.00 2.57
439 440 3.068590 GGGCCTGTAACCATTGATCAATG 59.931 47.826 32.70 32.70 45.77 2.82
453 454 7.817641 CATTGATCAATGGATTCGATCATTCT 58.182 34.615 32.24 0.88 43.65 2.40
454 455 8.943002 CATTGATCAATGGATTCGATCATTCTA 58.057 33.333 32.24 0.00 43.65 2.10
455 456 8.907222 TTGATCAATGGATTCGATCATTCTAA 57.093 30.769 3.38 0.00 43.65 2.10
456 457 9.511272 TTGATCAATGGATTCGATCATTCTAAT 57.489 29.630 3.38 2.76 43.65 1.73
457 458 9.511272 TGATCAATGGATTCGATCATTCTAATT 57.489 29.630 0.00 0.00 40.37 1.40
458 459 9.985318 GATCAATGGATTCGATCATTCTAATTC 57.015 33.333 6.29 0.00 36.41 2.17
459 460 8.907222 TCAATGGATTCGATCATTCTAATTCA 57.093 30.769 6.29 0.00 29.75 2.57
460 461 9.341078 TCAATGGATTCGATCATTCTAATTCAA 57.659 29.630 6.29 0.00 29.18 2.69
461 462 9.955208 CAATGGATTCGATCATTCTAATTCAAA 57.045 29.630 6.29 0.00 29.18 2.69
463 464 9.956720 ATGGATTCGATCATTCTAATTCAAAAC 57.043 29.630 0.00 0.00 29.18 2.43
464 465 8.955388 TGGATTCGATCATTCTAATTCAAAACA 58.045 29.630 0.00 0.00 0.00 2.83
465 466 9.956720 GGATTCGATCATTCTAATTCAAAACAT 57.043 29.630 0.00 0.00 0.00 2.71
508 509 4.084888 GCACGGCGGTGTACTTGC 62.085 66.667 23.39 6.20 46.13 4.01
509 510 3.773630 CACGGCGGTGTACTTGCG 61.774 66.667 13.24 0.00 39.38 4.85
510 511 3.980989 ACGGCGGTGTACTTGCGA 61.981 61.111 13.24 0.00 0.00 5.10
511 512 2.508439 CGGCGGTGTACTTGCGAT 60.508 61.111 0.00 0.00 0.00 4.58
512 513 2.798501 CGGCGGTGTACTTGCGATG 61.799 63.158 0.00 0.00 0.00 3.84
514 515 2.461110 GCGGTGTACTTGCGATGGG 61.461 63.158 0.00 0.00 0.00 4.00
515 516 2.461110 CGGTGTACTTGCGATGGGC 61.461 63.158 0.00 0.00 43.96 5.36
540 541 0.533491 GCGTGTGTACCCATACCTGA 59.467 55.000 0.00 0.00 29.52 3.86
546 547 4.038883 GTGTGTACCCATACCTGACTATCC 59.961 50.000 0.00 0.00 0.00 2.59
570 571 3.094062 GCCGTGGCAGCCAGAGATA 62.094 63.158 16.83 0.00 41.49 1.98
579 580 3.639094 GGCAGCCAGAGATAGAGTTTAGA 59.361 47.826 6.55 0.00 0.00 2.10
596 597 1.693103 GAGGTCGGGGAGGGGAAAT 60.693 63.158 0.00 0.00 0.00 2.17
600 601 2.193248 CGGGGAGGGGAAATGAGC 59.807 66.667 0.00 0.00 0.00 4.26
601 602 2.193248 GGGGAGGGGAAATGAGCG 59.807 66.667 0.00 0.00 0.00 5.03
710 719 4.508128 GTTCTCGATCGCCGGCCA 62.508 66.667 23.46 9.24 39.14 5.36
731 740 1.069378 GACGTACTGGGCGAAAGACG 61.069 60.000 0.00 0.00 43.44 4.18
786 796 2.901042 CGTAAGGTCAGGGGAGGC 59.099 66.667 0.00 0.00 0.00 4.70
800 810 1.777272 GGGAGGCCTGACCATTTCTAT 59.223 52.381 12.00 0.00 43.14 1.98
803 813 3.633986 GGAGGCCTGACCATTTCTATTTG 59.366 47.826 12.00 0.00 43.14 2.32
813 823 7.771183 TGACCATTTCTATTTGGCAAATACTC 58.229 34.615 24.83 12.53 36.41 2.59
814 824 7.615365 TGACCATTTCTATTTGGCAAATACTCT 59.385 33.333 24.83 8.25 36.41 3.24
816 826 7.836183 ACCATTTCTATTTGGCAAATACTCTCT 59.164 33.333 24.83 6.87 36.41 3.10
817 827 8.348507 CCATTTCTATTTGGCAAATACTCTCTC 58.651 37.037 24.83 0.00 32.38 3.20
818 828 9.118300 CATTTCTATTTGGCAAATACTCTCTCT 57.882 33.333 24.83 5.49 32.38 3.10
819 829 8.723942 TTTCTATTTGGCAAATACTCTCTCTC 57.276 34.615 24.83 0.00 32.38 3.20
820 830 6.821388 TCTATTTGGCAAATACTCTCTCTCC 58.179 40.000 24.83 0.00 32.38 3.71
821 831 3.526931 TTGGCAAATACTCTCTCTCCG 57.473 47.619 0.00 0.00 0.00 4.63
823 833 2.832129 TGGCAAATACTCTCTCTCCGTT 59.168 45.455 0.00 0.00 0.00 4.44
824 834 3.119101 TGGCAAATACTCTCTCTCCGTTC 60.119 47.826 0.00 0.00 0.00 3.95
825 835 3.131400 GGCAAATACTCTCTCTCCGTTCT 59.869 47.826 0.00 0.00 0.00 3.01
828 838 5.639931 GCAAATACTCTCTCTCCGTTCTTTT 59.360 40.000 0.00 0.00 0.00 2.27
831 841 7.706100 AATACTCTCTCTCCGTTCTTTTAGT 57.294 36.000 0.00 0.00 0.00 2.24
832 842 5.632244 ACTCTCTCTCCGTTCTTTTAGTC 57.368 43.478 0.00 0.00 0.00 2.59
833 843 5.318630 ACTCTCTCTCCGTTCTTTTAGTCT 58.681 41.667 0.00 0.00 0.00 3.24
834 844 5.182380 ACTCTCTCTCCGTTCTTTTAGTCTG 59.818 44.000 0.00 0.00 0.00 3.51
836 846 3.572682 TCTCTCCGTTCTTTTAGTCTGCA 59.427 43.478 0.00 0.00 0.00 4.41
837 847 4.220821 TCTCTCCGTTCTTTTAGTCTGCAT 59.779 41.667 0.00 0.00 0.00 3.96
838 848 4.245660 TCTCCGTTCTTTTAGTCTGCATG 58.754 43.478 0.00 0.00 0.00 4.06
839 849 3.997021 CTCCGTTCTTTTAGTCTGCATGT 59.003 43.478 0.00 0.00 0.00 3.21
840 850 5.047590 TCTCCGTTCTTTTAGTCTGCATGTA 60.048 40.000 0.00 0.00 0.00 2.29
842 852 4.330074 CCGTTCTTTTAGTCTGCATGTAGG 59.670 45.833 11.15 0.00 0.00 3.18
844 854 5.408604 CGTTCTTTTAGTCTGCATGTAGGTT 59.591 40.000 11.15 2.41 0.00 3.50
845 855 6.073222 CGTTCTTTTAGTCTGCATGTAGGTTT 60.073 38.462 11.15 0.00 0.00 3.27
846 856 7.519970 CGTTCTTTTAGTCTGCATGTAGGTTTT 60.520 37.037 11.15 0.00 0.00 2.43
847 857 7.202016 TCTTTTAGTCTGCATGTAGGTTTTG 57.798 36.000 11.15 0.00 0.00 2.44
848 858 5.371115 TTTAGTCTGCATGTAGGTTTTGC 57.629 39.130 11.15 0.00 36.91 3.68
849 859 3.146104 AGTCTGCATGTAGGTTTTGCT 57.854 42.857 11.15 0.00 37.28 3.91
852 862 5.070001 AGTCTGCATGTAGGTTTTGCTTAA 58.930 37.500 11.15 0.00 37.28 1.85
853 863 5.534654 AGTCTGCATGTAGGTTTTGCTTAAA 59.465 36.000 11.15 0.00 37.28 1.52
854 864 6.040391 AGTCTGCATGTAGGTTTTGCTTAAAA 59.960 34.615 11.15 0.00 37.28 1.52
855 865 6.868339 GTCTGCATGTAGGTTTTGCTTAAAAT 59.132 34.615 11.15 0.00 37.28 1.82
856 866 7.062255 GTCTGCATGTAGGTTTTGCTTAAAATC 59.938 37.037 11.15 0.00 37.28 2.17
857 867 6.753180 TGCATGTAGGTTTTGCTTAAAATCA 58.247 32.000 0.00 0.00 37.28 2.57
858 868 7.212976 TGCATGTAGGTTTTGCTTAAAATCAA 58.787 30.769 0.00 0.00 37.28 2.57
859 869 7.712639 TGCATGTAGGTTTTGCTTAAAATCAAA 59.287 29.630 0.00 0.00 37.28 2.69
860 870 8.555361 GCATGTAGGTTTTGCTTAAAATCAAAA 58.445 29.630 0.00 1.44 39.13 2.44
869 879 7.642071 TTGCTTAAAATCAAAACATCTCTGC 57.358 32.000 0.00 0.00 0.00 4.26
870 880 6.985117 TGCTTAAAATCAAAACATCTCTGCT 58.015 32.000 0.00 0.00 0.00 4.24
871 881 7.436118 TGCTTAAAATCAAAACATCTCTGCTT 58.564 30.769 0.00 0.00 0.00 3.91
872 882 7.927629 TGCTTAAAATCAAAACATCTCTGCTTT 59.072 29.630 0.00 0.00 0.00 3.51
873 883 8.219105 GCTTAAAATCAAAACATCTCTGCTTTG 58.781 33.333 0.00 0.00 38.98 2.77
875 885 7.704789 AAAATCAAAACATCTCTGCTTTGAC 57.295 32.000 6.38 0.00 45.34 3.18
876 886 4.836125 TCAAAACATCTCTGCTTTGACC 57.164 40.909 1.24 0.00 40.66 4.02
877 887 4.206375 TCAAAACATCTCTGCTTTGACCA 58.794 39.130 1.24 0.00 40.66 4.02
878 888 4.644234 TCAAAACATCTCTGCTTTGACCAA 59.356 37.500 1.24 0.00 40.66 3.67
879 889 5.126869 TCAAAACATCTCTGCTTTGACCAAA 59.873 36.000 1.24 0.00 40.66 3.28
880 890 7.949855 ATCAAAACATCTCTGCTTTGACCAAAG 60.950 37.037 15.95 15.95 45.34 2.77
907 917 2.193306 AAAAAGAACGCAGCACACAG 57.807 45.000 0.00 0.00 0.00 3.66
908 918 1.378531 AAAAGAACGCAGCACACAGA 58.621 45.000 0.00 0.00 0.00 3.41
909 919 0.940126 AAAGAACGCAGCACACAGAG 59.060 50.000 0.00 0.00 0.00 3.35
910 920 0.882042 AAGAACGCAGCACACAGAGG 60.882 55.000 0.00 0.00 0.00 3.69
911 921 1.595382 GAACGCAGCACACAGAGGT 60.595 57.895 0.00 0.00 0.00 3.85
941 951 1.395608 CCACACGCCATTAAGGTAACG 59.604 52.381 0.00 0.00 46.39 3.18
943 953 0.375803 CACGCCATTAAGGTAACGGC 59.624 55.000 0.00 0.00 43.17 5.68
949 959 1.940613 CATTAAGGTAACGGCCAGAGC 59.059 52.381 2.24 0.00 46.39 4.09
950 960 0.978151 TTAAGGTAACGGCCAGAGCA 59.022 50.000 2.24 0.00 42.56 4.26
951 961 0.248289 TAAGGTAACGGCCAGAGCAC 59.752 55.000 2.24 0.00 42.56 4.40
952 962 2.781595 AAGGTAACGGCCAGAGCACG 62.782 60.000 2.24 0.00 42.56 5.34
953 963 2.048503 GTAACGGCCAGAGCACGT 60.049 61.111 2.24 0.00 44.30 4.49
954 964 1.213537 GTAACGGCCAGAGCACGTA 59.786 57.895 2.24 0.00 42.51 3.57
955 965 0.801067 GTAACGGCCAGAGCACGTAG 60.801 60.000 2.24 0.00 42.51 3.51
970 980 3.814049 GTAGTACGTACGCGCTGAT 57.186 52.632 19.49 3.46 42.83 2.90
971 981 2.930230 GTAGTACGTACGCGCTGATA 57.070 50.000 19.49 2.48 42.83 2.15
973 983 0.305922 AGTACGTACGCGCTGATACC 59.694 55.000 19.49 0.00 42.83 2.73
974 984 0.305922 GTACGTACGCGCTGATACCT 59.694 55.000 16.72 0.00 42.83 3.08
982 992 1.433471 CGCTGATACCTGAGCACGA 59.567 57.895 0.00 0.00 34.69 4.35
984 994 1.565305 GCTGATACCTGAGCACGAAG 58.435 55.000 0.00 0.00 35.15 3.79
1002 1012 4.331258 CTGCGCGCGTCGATCATG 62.331 66.667 32.35 10.02 41.67 3.07
1206 1219 1.026718 CCAAGTTCATCCTCGCCACC 61.027 60.000 0.00 0.00 0.00 4.61
1251 1276 4.704103 TCCTCCCAGCCGCAGTCT 62.704 66.667 0.00 0.00 0.00 3.24
1254 1279 2.283604 TCCCAGCCGCAGTCTGTA 60.284 61.111 0.93 0.00 27.65 2.74
1398 1426 4.738998 CCGACCCCCAGCATGCAA 62.739 66.667 21.98 0.00 31.97 4.08
1436 1464 0.935898 CTGATCGACTCTGGCAATGC 59.064 55.000 0.00 0.00 0.00 3.56
2359 2399 0.388907 CAAAGTGCGCAAGGGGAATG 60.389 55.000 14.00 0.51 38.28 2.67
2637 2692 1.300931 GATAAGATCGCCGCAGCCA 60.301 57.895 0.00 0.00 34.57 4.75
2822 2877 4.849329 CGGGTCGCTACGTGGAGC 62.849 72.222 1.81 0.76 39.20 4.70
3336 3398 2.679059 CGTAGAGGACGTGGAGAAGGTA 60.679 54.545 0.00 0.00 46.86 3.08
3490 3555 2.950309 TGCTACGTAGAATCCTCACCTC 59.050 50.000 26.53 4.26 0.00 3.85
3507 3572 4.532126 TCACCTCTAATTCCTCAGCTCAAA 59.468 41.667 0.00 0.00 0.00 2.69
3631 3700 7.280876 GTGGTCATTCATCTAATTCTGTTGCTA 59.719 37.037 0.00 0.00 0.00 3.49
3799 3872 7.899178 TTACGTGCTGAAGATTTTTCATCTA 57.101 32.000 0.00 0.00 0.00 1.98
3835 3908 5.481824 TCTGTCACACACATCCTCTCTATTT 59.518 40.000 0.00 0.00 33.23 1.40
3848 3921 6.137559 TCCTCTCTATTTCTTTAGGAGGACC 58.862 44.000 0.00 0.00 38.89 4.46
3882 3955 1.475403 TAGTCTGGGCCTTCGAGAAG 58.525 55.000 4.53 5.90 38.14 2.85
4204 4277 8.618702 AATATGGAGAGTTCTAAATGATGCAG 57.381 34.615 0.00 0.00 0.00 4.41
4233 4307 1.518367 AACTCCCTTGTCTTCACCCA 58.482 50.000 0.00 0.00 0.00 4.51
4351 4428 3.502356 AGCAAGGAAAAACGGGGAAATA 58.498 40.909 0.00 0.00 0.00 1.40
4363 4440 2.224621 CGGGGAAATATGCACCTCTCAT 60.225 50.000 0.00 0.00 0.00 2.90
4425 4513 1.189752 ACTCGCCACACTGATCTCAT 58.810 50.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.909550 TGGTAAATAAATCAGCAAGGTTGT 57.090 33.333 0.00 0.00 0.00 3.32
1 2 7.378181 ACTTGGTAAATAAATCAGCAAGGTTG 58.622 34.615 14.86 0.00 46.75 3.77
2 3 7.451566 AGACTTGGTAAATAAATCAGCAAGGTT 59.548 33.333 14.86 2.83 46.75 3.50
4 5 7.337942 AGAGACTTGGTAAATAAATCAGCAAGG 59.662 37.037 14.86 1.11 46.75 3.61
6 7 9.162764 GTAGAGACTTGGTAAATAAATCAGCAA 57.837 33.333 0.00 0.00 0.00 3.91
7 8 7.769044 GGTAGAGACTTGGTAAATAAATCAGCA 59.231 37.037 0.00 0.00 0.00 4.41
8 9 7.769044 TGGTAGAGACTTGGTAAATAAATCAGC 59.231 37.037 0.00 0.00 0.00 4.26
9 10 9.667107 TTGGTAGAGACTTGGTAAATAAATCAG 57.333 33.333 0.00 0.00 0.00 2.90
17 18 9.629878 TGTAAATTTTGGTAGAGACTTGGTAAA 57.370 29.630 0.00 0.00 0.00 2.01
18 19 9.802039 ATGTAAATTTTGGTAGAGACTTGGTAA 57.198 29.630 0.00 0.00 0.00 2.85
19 20 9.802039 AATGTAAATTTTGGTAGAGACTTGGTA 57.198 29.630 0.00 0.00 0.00 3.25
20 21 8.706322 AATGTAAATTTTGGTAGAGACTTGGT 57.294 30.769 0.00 0.00 0.00 3.67
21 22 8.244113 GGAATGTAAATTTTGGTAGAGACTTGG 58.756 37.037 0.00 0.00 0.00 3.61
22 23 8.792633 TGGAATGTAAATTTTGGTAGAGACTTG 58.207 33.333 0.00 0.00 0.00 3.16
23 24 8.934023 TGGAATGTAAATTTTGGTAGAGACTT 57.066 30.769 0.00 0.00 0.00 3.01
24 25 8.383175 TCTGGAATGTAAATTTTGGTAGAGACT 58.617 33.333 0.00 0.00 0.00 3.24
25 26 8.561738 TCTGGAATGTAAATTTTGGTAGAGAC 57.438 34.615 0.00 0.00 0.00 3.36
26 27 9.581289 TTTCTGGAATGTAAATTTTGGTAGAGA 57.419 29.630 0.00 0.00 0.00 3.10
43 44 6.862469 ATTCCATGAACACATTTCTGGAAT 57.138 33.333 16.65 16.65 39.30 3.01
44 45 6.457355 CAATTCCATGAACACATTTCTGGAA 58.543 36.000 14.68 14.68 38.37 3.53
45 46 5.047164 CCAATTCCATGAACACATTTCTGGA 60.047 40.000 0.00 0.00 0.00 3.86
46 47 5.172934 CCAATTCCATGAACACATTTCTGG 58.827 41.667 0.00 0.00 0.00 3.86
47 48 5.786311 ACCAATTCCATGAACACATTTCTG 58.214 37.500 0.00 0.00 0.00 3.02
48 49 7.178983 ACATACCAATTCCATGAACACATTTCT 59.821 33.333 0.00 0.00 0.00 2.52
49 50 7.276218 CACATACCAATTCCATGAACACATTTC 59.724 37.037 0.00 0.00 0.00 2.17
50 51 7.039152 TCACATACCAATTCCATGAACACATTT 60.039 33.333 0.00 0.00 0.00 2.32
51 52 6.436847 TCACATACCAATTCCATGAACACATT 59.563 34.615 0.00 0.00 0.00 2.71
52 53 5.951148 TCACATACCAATTCCATGAACACAT 59.049 36.000 0.00 0.00 0.00 3.21
53 54 5.320277 TCACATACCAATTCCATGAACACA 58.680 37.500 0.00 0.00 0.00 3.72
54 55 5.895636 TCACATACCAATTCCATGAACAC 57.104 39.130 0.00 0.00 0.00 3.32
55 56 6.150976 GTCTTCACATACCAATTCCATGAACA 59.849 38.462 0.00 0.00 0.00 3.18
56 57 6.375455 AGTCTTCACATACCAATTCCATGAAC 59.625 38.462 0.00 0.00 0.00 3.18
57 58 6.484288 AGTCTTCACATACCAATTCCATGAA 58.516 36.000 0.00 0.00 0.00 2.57
58 59 6.065976 AGTCTTCACATACCAATTCCATGA 57.934 37.500 0.00 0.00 0.00 3.07
59 60 6.764308 AAGTCTTCACATACCAATTCCATG 57.236 37.500 0.00 0.00 0.00 3.66
60 61 7.056635 CCTAAGTCTTCACATACCAATTCCAT 58.943 38.462 0.00 0.00 0.00 3.41
61 62 6.414732 CCTAAGTCTTCACATACCAATTCCA 58.585 40.000 0.00 0.00 0.00 3.53
62 63 5.823045 CCCTAAGTCTTCACATACCAATTCC 59.177 44.000 0.00 0.00 0.00 3.01
63 64 6.539103 GTCCCTAAGTCTTCACATACCAATTC 59.461 42.308 0.00 0.00 0.00 2.17
64 65 6.215636 AGTCCCTAAGTCTTCACATACCAATT 59.784 38.462 0.00 0.00 0.00 2.32
65 66 5.726793 AGTCCCTAAGTCTTCACATACCAAT 59.273 40.000 0.00 0.00 0.00 3.16
66 67 5.091552 AGTCCCTAAGTCTTCACATACCAA 58.908 41.667 0.00 0.00 0.00 3.67
67 68 4.684724 AGTCCCTAAGTCTTCACATACCA 58.315 43.478 0.00 0.00 0.00 3.25
68 69 5.420409 CAAGTCCCTAAGTCTTCACATACC 58.580 45.833 0.00 0.00 0.00 2.73
69 70 4.870991 GCAAGTCCCTAAGTCTTCACATAC 59.129 45.833 0.00 0.00 0.00 2.39
70 71 4.530553 TGCAAGTCCCTAAGTCTTCACATA 59.469 41.667 0.00 0.00 0.00 2.29
71 72 3.327757 TGCAAGTCCCTAAGTCTTCACAT 59.672 43.478 0.00 0.00 0.00 3.21
72 73 2.703536 TGCAAGTCCCTAAGTCTTCACA 59.296 45.455 0.00 0.00 0.00 3.58
73 74 3.330267 CTGCAAGTCCCTAAGTCTTCAC 58.670 50.000 0.00 0.00 0.00 3.18
74 75 2.303022 CCTGCAAGTCCCTAAGTCTTCA 59.697 50.000 0.00 0.00 0.00 3.02
75 76 2.303311 ACCTGCAAGTCCCTAAGTCTTC 59.697 50.000 0.00 0.00 0.00 2.87
76 77 2.039084 CACCTGCAAGTCCCTAAGTCTT 59.961 50.000 0.00 0.00 0.00 3.01
77 78 1.625818 CACCTGCAAGTCCCTAAGTCT 59.374 52.381 0.00 0.00 0.00 3.24
78 79 1.348036 ACACCTGCAAGTCCCTAAGTC 59.652 52.381 0.00 0.00 0.00 3.01
79 80 1.348036 GACACCTGCAAGTCCCTAAGT 59.652 52.381 2.99 0.00 0.00 2.24
80 81 1.347707 TGACACCTGCAAGTCCCTAAG 59.652 52.381 10.11 0.00 33.89 2.18
81 82 1.347707 CTGACACCTGCAAGTCCCTAA 59.652 52.381 10.11 0.00 33.89 2.69
82 83 0.976641 CTGACACCTGCAAGTCCCTA 59.023 55.000 10.11 0.00 33.89 3.53
83 84 1.757306 CTGACACCTGCAAGTCCCT 59.243 57.895 10.11 0.00 33.89 4.20
84 85 1.302832 CCTGACACCTGCAAGTCCC 60.303 63.158 10.11 0.00 33.89 4.46
85 86 1.302832 CCCTGACACCTGCAAGTCC 60.303 63.158 10.11 0.00 33.89 3.85
86 87 1.302832 CCCCTGACACCTGCAAGTC 60.303 63.158 6.65 6.65 35.37 3.01
87 88 2.833913 CCCCCTGACACCTGCAAGT 61.834 63.158 0.00 0.00 0.00 3.16
88 89 2.034687 CCCCCTGACACCTGCAAG 59.965 66.667 0.00 0.00 0.00 4.01
89 90 2.449518 TCCCCCTGACACCTGCAA 60.450 61.111 0.00 0.00 0.00 4.08
90 91 2.930019 CTCCCCCTGACACCTGCA 60.930 66.667 0.00 0.00 0.00 4.41
91 92 2.930562 ACTCCCCCTGACACCTGC 60.931 66.667 0.00 0.00 0.00 4.85
92 93 1.229336 AGACTCCCCCTGACACCTG 60.229 63.158 0.00 0.00 0.00 4.00
93 94 1.079438 GAGACTCCCCCTGACACCT 59.921 63.158 0.00 0.00 0.00 4.00
94 95 0.545548 AAGAGACTCCCCCTGACACC 60.546 60.000 0.00 0.00 0.00 4.16
95 96 0.899019 GAAGAGACTCCCCCTGACAC 59.101 60.000 0.00 0.00 0.00 3.67
96 97 0.787084 AGAAGAGACTCCCCCTGACA 59.213 55.000 0.00 0.00 0.00 3.58
97 98 1.552792 CAAGAAGAGACTCCCCCTGAC 59.447 57.143 0.00 0.00 0.00 3.51
98 99 1.433199 TCAAGAAGAGACTCCCCCTGA 59.567 52.381 0.00 0.00 0.00 3.86
99 100 1.944177 TCAAGAAGAGACTCCCCCTG 58.056 55.000 0.00 0.00 0.00 4.45
100 101 2.723530 TTCAAGAAGAGACTCCCCCT 57.276 50.000 0.00 0.00 0.00 4.79
101 102 5.455469 GGATATTTCAAGAAGAGACTCCCCC 60.455 48.000 0.00 0.00 0.00 5.40
102 103 5.368230 AGGATATTTCAAGAAGAGACTCCCC 59.632 44.000 0.00 0.00 0.00 4.81
103 104 6.098982 TGAGGATATTTCAAGAAGAGACTCCC 59.901 42.308 0.00 0.00 0.00 4.30
104 105 7.118496 TGAGGATATTTCAAGAAGAGACTCC 57.882 40.000 0.00 0.00 0.00 3.85
105 106 9.612066 AAATGAGGATATTTCAAGAAGAGACTC 57.388 33.333 0.00 0.00 0.00 3.36
106 107 9.972106 AAAATGAGGATATTTCAAGAAGAGACT 57.028 29.630 0.00 0.00 30.33 3.24
153 154 9.219603 CCTGAAACATATACTCACAAAGAAAGA 57.780 33.333 0.00 0.00 0.00 2.52
154 155 9.219603 TCCTGAAACATATACTCACAAAGAAAG 57.780 33.333 0.00 0.00 0.00 2.62
155 156 9.739276 ATCCTGAAACATATACTCACAAAGAAA 57.261 29.630 0.00 0.00 0.00 2.52
156 157 9.383519 GATCCTGAAACATATACTCACAAAGAA 57.616 33.333 0.00 0.00 0.00 2.52
157 158 8.762645 AGATCCTGAAACATATACTCACAAAGA 58.237 33.333 0.00 0.00 0.00 2.52
158 159 8.954950 AGATCCTGAAACATATACTCACAAAG 57.045 34.615 0.00 0.00 0.00 2.77
159 160 8.539544 TGAGATCCTGAAACATATACTCACAAA 58.460 33.333 0.00 0.00 0.00 2.83
160 161 8.078060 TGAGATCCTGAAACATATACTCACAA 57.922 34.615 0.00 0.00 0.00 3.33
161 162 7.660030 TGAGATCCTGAAACATATACTCACA 57.340 36.000 0.00 0.00 0.00 3.58
162 163 8.363390 TGATGAGATCCTGAAACATATACTCAC 58.637 37.037 0.00 0.00 35.31 3.51
163 164 8.482852 TGATGAGATCCTGAAACATATACTCA 57.517 34.615 0.00 0.00 36.55 3.41
164 165 9.770097 TTTGATGAGATCCTGAAACATATACTC 57.230 33.333 0.00 0.00 0.00 2.59
195 196 9.799106 AGATTCTCCTTCAAAAGTTCTTCATAA 57.201 29.630 0.00 0.00 0.00 1.90
196 197 9.799106 AAGATTCTCCTTCAAAAGTTCTTCATA 57.201 29.630 0.00 0.00 0.00 2.15
197 198 8.703378 AAGATTCTCCTTCAAAAGTTCTTCAT 57.297 30.769 0.00 0.00 0.00 2.57
198 199 8.525290 AAAGATTCTCCTTCAAAAGTTCTTCA 57.475 30.769 0.00 0.00 0.00 3.02
199 200 9.242477 CAAAAGATTCTCCTTCAAAAGTTCTTC 57.758 33.333 0.00 0.00 0.00 2.87
200 201 8.971073 TCAAAAGATTCTCCTTCAAAAGTTCTT 58.029 29.630 0.00 0.00 0.00 2.52
201 202 8.525290 TCAAAAGATTCTCCTTCAAAAGTTCT 57.475 30.769 0.00 0.00 0.00 3.01
202 203 8.624776 TCTCAAAAGATTCTCCTTCAAAAGTTC 58.375 33.333 0.00 0.00 0.00 3.01
203 204 8.525290 TCTCAAAAGATTCTCCTTCAAAAGTT 57.475 30.769 0.00 0.00 0.00 2.66
204 205 8.574737 CATCTCAAAAGATTCTCCTTCAAAAGT 58.425 33.333 0.00 0.00 40.38 2.66
205 206 8.790718 TCATCTCAAAAGATTCTCCTTCAAAAG 58.209 33.333 0.00 0.00 40.38 2.27
206 207 8.696043 TCATCTCAAAAGATTCTCCTTCAAAA 57.304 30.769 0.00 0.00 40.38 2.44
207 208 8.874744 ATCATCTCAAAAGATTCTCCTTCAAA 57.125 30.769 0.00 0.00 40.38 2.69
208 209 9.610705 CTATCATCTCAAAAGATTCTCCTTCAA 57.389 33.333 0.00 0.00 40.38 2.69
209 210 8.985922 TCTATCATCTCAAAAGATTCTCCTTCA 58.014 33.333 0.00 0.00 40.38 3.02
210 211 9.829507 TTCTATCATCTCAAAAGATTCTCCTTC 57.170 33.333 0.00 0.00 40.38 3.46
211 212 9.612066 GTTCTATCATCTCAAAAGATTCTCCTT 57.388 33.333 0.00 0.00 40.38 3.36
212 213 8.210265 GGTTCTATCATCTCAAAAGATTCTCCT 58.790 37.037 0.00 0.00 40.38 3.69
213 214 8.210265 AGGTTCTATCATCTCAAAAGATTCTCC 58.790 37.037 0.00 0.00 40.38 3.71
214 215 9.260002 GAGGTTCTATCATCTCAAAAGATTCTC 57.740 37.037 0.00 0.00 40.38 2.87
215 216 8.210265 GGAGGTTCTATCATCTCAAAAGATTCT 58.790 37.037 0.00 0.00 40.38 2.40
216 217 8.210265 AGGAGGTTCTATCATCTCAAAAGATTC 58.790 37.037 0.00 0.00 40.38 2.52
217 218 7.992033 CAGGAGGTTCTATCATCTCAAAAGATT 59.008 37.037 0.00 0.00 40.38 2.40
218 219 7.346698 TCAGGAGGTTCTATCATCTCAAAAGAT 59.653 37.037 0.00 0.00 43.24 2.40
219 220 6.669591 TCAGGAGGTTCTATCATCTCAAAAGA 59.330 38.462 0.00 0.00 35.54 2.52
220 221 6.882656 TCAGGAGGTTCTATCATCTCAAAAG 58.117 40.000 0.00 0.00 0.00 2.27
221 222 6.874278 TCAGGAGGTTCTATCATCTCAAAA 57.126 37.500 0.00 0.00 0.00 2.44
222 223 6.213397 TGTTCAGGAGGTTCTATCATCTCAAA 59.787 38.462 0.00 0.00 0.00 2.69
223 224 5.721480 TGTTCAGGAGGTTCTATCATCTCAA 59.279 40.000 0.00 0.00 0.00 3.02
224 225 5.272402 TGTTCAGGAGGTTCTATCATCTCA 58.728 41.667 0.00 0.00 0.00 3.27
225 226 5.860941 TGTTCAGGAGGTTCTATCATCTC 57.139 43.478 0.00 0.00 0.00 2.75
226 227 6.821616 ATTGTTCAGGAGGTTCTATCATCT 57.178 37.500 0.00 0.00 0.00 2.90
227 228 7.655328 CACTATTGTTCAGGAGGTTCTATCATC 59.345 40.741 0.00 0.00 0.00 2.92
228 229 7.345653 TCACTATTGTTCAGGAGGTTCTATCAT 59.654 37.037 0.00 0.00 0.00 2.45
229 230 6.667848 TCACTATTGTTCAGGAGGTTCTATCA 59.332 38.462 0.00 0.00 0.00 2.15
230 231 7.113658 TCACTATTGTTCAGGAGGTTCTATC 57.886 40.000 0.00 0.00 0.00 2.08
231 232 7.400339 TCTTCACTATTGTTCAGGAGGTTCTAT 59.600 37.037 0.00 0.00 0.00 1.98
232 233 6.724441 TCTTCACTATTGTTCAGGAGGTTCTA 59.276 38.462 0.00 0.00 0.00 2.10
233 234 5.544176 TCTTCACTATTGTTCAGGAGGTTCT 59.456 40.000 0.00 0.00 0.00 3.01
234 235 5.794894 TCTTCACTATTGTTCAGGAGGTTC 58.205 41.667 0.00 0.00 0.00 3.62
235 236 5.825593 TCTTCACTATTGTTCAGGAGGTT 57.174 39.130 0.00 0.00 0.00 3.50
236 237 5.485353 TCATCTTCACTATTGTTCAGGAGGT 59.515 40.000 0.00 0.00 0.00 3.85
237 238 5.982356 TCATCTTCACTATTGTTCAGGAGG 58.018 41.667 0.00 0.00 0.00 4.30
238 239 7.499292 AGATCATCTTCACTATTGTTCAGGAG 58.501 38.462 0.00 0.00 0.00 3.69
239 240 7.429374 AGATCATCTTCACTATTGTTCAGGA 57.571 36.000 0.00 0.00 0.00 3.86
240 241 8.200120 TGTAGATCATCTTCACTATTGTTCAGG 58.800 37.037 0.00 0.00 0.00 3.86
241 242 9.761504 ATGTAGATCATCTTCACTATTGTTCAG 57.238 33.333 0.00 0.00 29.76 3.02
242 243 9.538508 CATGTAGATCATCTTCACTATTGTTCA 57.461 33.333 0.00 0.00 34.09 3.18
243 244 8.986847 CCATGTAGATCATCTTCACTATTGTTC 58.013 37.037 0.00 0.00 34.09 3.18
244 245 8.489489 ACCATGTAGATCATCTTCACTATTGTT 58.511 33.333 0.00 0.00 34.09 2.83
245 246 8.027524 ACCATGTAGATCATCTTCACTATTGT 57.972 34.615 0.00 0.00 34.09 2.71
246 247 7.601886 GGACCATGTAGATCATCTTCACTATTG 59.398 40.741 0.00 0.00 34.09 1.90
247 248 7.290948 TGGACCATGTAGATCATCTTCACTATT 59.709 37.037 0.00 0.00 34.09 1.73
248 249 6.784473 TGGACCATGTAGATCATCTTCACTAT 59.216 38.462 0.00 0.00 34.09 2.12
249 250 6.136155 TGGACCATGTAGATCATCTTCACTA 58.864 40.000 0.00 0.00 34.09 2.74
250 251 4.964897 TGGACCATGTAGATCATCTTCACT 59.035 41.667 0.00 0.00 34.09 3.41
251 252 5.282055 TGGACCATGTAGATCATCTTCAC 57.718 43.478 0.00 0.00 34.09 3.18
252 253 4.202295 GCTGGACCATGTAGATCATCTTCA 60.202 45.833 0.00 0.00 34.09 3.02
253 254 4.314121 GCTGGACCATGTAGATCATCTTC 58.686 47.826 0.00 0.00 34.09 2.87
254 255 3.072184 GGCTGGACCATGTAGATCATCTT 59.928 47.826 0.00 0.00 38.86 2.40
255 256 2.636893 GGCTGGACCATGTAGATCATCT 59.363 50.000 0.00 0.00 38.86 2.90
256 257 2.636893 AGGCTGGACCATGTAGATCATC 59.363 50.000 0.00 0.00 43.14 2.92
257 258 2.699160 AGGCTGGACCATGTAGATCAT 58.301 47.619 0.00 0.00 43.14 2.45
258 259 2.180946 AGGCTGGACCATGTAGATCA 57.819 50.000 0.00 0.00 43.14 2.92
259 260 3.501349 TCTAGGCTGGACCATGTAGATC 58.499 50.000 0.00 0.00 43.14 2.75
260 261 3.619900 TCTAGGCTGGACCATGTAGAT 57.380 47.619 0.00 0.00 43.14 1.98
261 262 3.619900 ATCTAGGCTGGACCATGTAGA 57.380 47.619 1.44 2.41 43.14 2.59
262 263 4.221703 CCTAATCTAGGCTGGACCATGTAG 59.778 50.000 1.44 0.75 43.14 2.74
263 264 4.160329 CCTAATCTAGGCTGGACCATGTA 58.840 47.826 1.44 0.00 43.14 2.29
264 265 2.975489 CCTAATCTAGGCTGGACCATGT 59.025 50.000 1.44 0.00 43.14 3.21
265 266 2.304180 CCCTAATCTAGGCTGGACCATG 59.696 54.545 1.44 0.00 44.86 3.66
266 267 2.625639 CCCTAATCTAGGCTGGACCAT 58.374 52.381 1.44 0.00 44.86 3.55
267 268 1.414538 CCCCTAATCTAGGCTGGACCA 60.415 57.143 1.44 0.00 44.86 4.02
268 269 1.353091 CCCCTAATCTAGGCTGGACC 58.647 60.000 1.44 0.00 44.86 4.46
269 270 1.132817 TCCCCCTAATCTAGGCTGGAC 60.133 57.143 1.44 0.00 44.86 4.02
270 271 1.150135 CTCCCCCTAATCTAGGCTGGA 59.850 57.143 2.05 2.05 44.86 3.86
271 272 1.132689 ACTCCCCCTAATCTAGGCTGG 60.133 57.143 0.00 0.00 44.86 4.85
272 273 1.974236 CACTCCCCCTAATCTAGGCTG 59.026 57.143 0.00 0.00 44.86 4.85
273 274 1.581149 ACACTCCCCCTAATCTAGGCT 59.419 52.381 0.00 0.00 44.86 4.58
274 275 2.104669 ACACTCCCCCTAATCTAGGC 57.895 55.000 0.00 0.00 44.86 3.93
275 276 5.304871 GTCTTAACACTCCCCCTAATCTAGG 59.695 48.000 0.00 0.00 45.81 3.02
276 277 6.137559 AGTCTTAACACTCCCCCTAATCTAG 58.862 44.000 0.00 0.00 0.00 2.43
277 278 6.101274 AGTCTTAACACTCCCCCTAATCTA 57.899 41.667 0.00 0.00 0.00 1.98
278 279 4.961585 AGTCTTAACACTCCCCCTAATCT 58.038 43.478 0.00 0.00 0.00 2.40
279 280 6.803366 TTAGTCTTAACACTCCCCCTAATC 57.197 41.667 0.00 0.00 0.00 1.75
280 281 7.628101 AGAATTAGTCTTAACACTCCCCCTAAT 59.372 37.037 0.00 0.00 29.66 1.73
281 282 6.964086 AGAATTAGTCTTAACACTCCCCCTAA 59.036 38.462 0.00 0.00 29.66 2.69
282 283 6.383147 CAGAATTAGTCTTAACACTCCCCCTA 59.617 42.308 0.00 0.00 32.70 3.53
283 284 5.189934 CAGAATTAGTCTTAACACTCCCCCT 59.810 44.000 0.00 0.00 32.70 4.79
284 285 5.045797 ACAGAATTAGTCTTAACACTCCCCC 60.046 44.000 0.00 0.00 32.70 5.40
285 286 6.051179 ACAGAATTAGTCTTAACACTCCCC 57.949 41.667 0.00 0.00 32.70 4.81
286 287 7.548427 GGTTACAGAATTAGTCTTAACACTCCC 59.452 40.741 12.69 0.00 34.68 4.30
287 288 7.275123 CGGTTACAGAATTAGTCTTAACACTCC 59.725 40.741 12.69 0.00 34.68 3.85
288 289 8.025445 TCGGTTACAGAATTAGTCTTAACACTC 58.975 37.037 12.69 1.71 34.68 3.51
289 290 7.811713 GTCGGTTACAGAATTAGTCTTAACACT 59.188 37.037 12.69 0.00 34.68 3.55
290 291 7.201299 CGTCGGTTACAGAATTAGTCTTAACAC 60.201 40.741 12.69 6.34 34.68 3.32
291 292 6.803320 CGTCGGTTACAGAATTAGTCTTAACA 59.197 38.462 12.69 0.00 34.68 2.41
292 293 6.237411 GCGTCGGTTACAGAATTAGTCTTAAC 60.237 42.308 0.00 6.36 32.70 2.01
293 294 5.801947 GCGTCGGTTACAGAATTAGTCTTAA 59.198 40.000 0.00 0.00 32.70 1.85
294 295 5.335127 GCGTCGGTTACAGAATTAGTCTTA 58.665 41.667 0.00 0.00 32.70 2.10
295 296 4.171754 GCGTCGGTTACAGAATTAGTCTT 58.828 43.478 0.00 0.00 32.70 3.01
296 297 3.428589 GGCGTCGGTTACAGAATTAGTCT 60.429 47.826 0.00 0.00 36.88 3.24
297 298 2.856557 GGCGTCGGTTACAGAATTAGTC 59.143 50.000 0.00 0.00 0.00 2.59
298 299 2.494870 AGGCGTCGGTTACAGAATTAGT 59.505 45.455 0.00 0.00 0.00 2.24
299 300 3.160777 AGGCGTCGGTTACAGAATTAG 57.839 47.619 0.00 0.00 0.00 1.73
300 301 3.514645 GAAGGCGTCGGTTACAGAATTA 58.485 45.455 0.00 0.00 0.00 1.40
301 302 2.344025 GAAGGCGTCGGTTACAGAATT 58.656 47.619 0.00 0.00 0.00 2.17
302 303 1.734707 CGAAGGCGTCGGTTACAGAAT 60.735 52.381 15.14 0.00 46.45 2.40
303 304 0.387622 CGAAGGCGTCGGTTACAGAA 60.388 55.000 15.14 0.00 46.45 3.02
304 305 1.210931 CGAAGGCGTCGGTTACAGA 59.789 57.895 15.14 0.00 46.45 3.41
305 306 3.763319 CGAAGGCGTCGGTTACAG 58.237 61.111 15.14 0.00 46.45 2.74
315 316 0.162294 GACAAACCGTAACGAAGGCG 59.838 55.000 0.00 0.00 44.79 5.52
316 317 0.514255 GGACAAACCGTAACGAAGGC 59.486 55.000 0.00 0.00 0.00 4.35
317 318 1.150827 GGGACAAACCGTAACGAAGG 58.849 55.000 0.00 0.00 40.11 3.46
327 328 2.592287 TCGGTTGCGGGACAAACC 60.592 61.111 0.00 0.00 43.54 3.27
328 329 2.635338 GTCGGTTGCGGGACAAAC 59.365 61.111 0.00 0.00 42.97 2.93
329 330 2.968156 CGTCGGTTGCGGGACAAA 60.968 61.111 0.00 0.00 40.82 2.83
337 338 2.668550 AAGGAAGGCGTCGGTTGC 60.669 61.111 0.00 0.00 0.00 4.17
338 339 2.380410 CGAAGGAAGGCGTCGGTTG 61.380 63.158 0.00 0.00 0.00 3.77
339 340 1.885163 ATCGAAGGAAGGCGTCGGTT 61.885 55.000 0.00 0.00 0.00 4.44
340 341 2.280823 GATCGAAGGAAGGCGTCGGT 62.281 60.000 0.00 0.00 0.00 4.69
341 342 1.589196 GATCGAAGGAAGGCGTCGG 60.589 63.158 0.00 0.00 0.00 4.79
342 343 0.592754 GAGATCGAAGGAAGGCGTCG 60.593 60.000 0.00 0.00 0.00 5.12
343 344 0.249114 GGAGATCGAAGGAAGGCGTC 60.249 60.000 0.00 0.00 0.00 5.19
344 345 0.684805 AGGAGATCGAAGGAAGGCGT 60.685 55.000 0.00 0.00 0.00 5.68
345 346 1.268352 CTAGGAGATCGAAGGAAGGCG 59.732 57.143 0.00 0.00 0.00 5.52
346 347 2.588620 TCTAGGAGATCGAAGGAAGGC 58.411 52.381 0.00 0.00 0.00 4.35
347 348 3.319689 GGTTCTAGGAGATCGAAGGAAGG 59.680 52.174 0.00 0.00 0.00 3.46
348 349 3.003897 CGGTTCTAGGAGATCGAAGGAAG 59.996 52.174 0.00 0.00 0.00 3.46
349 350 2.950309 CGGTTCTAGGAGATCGAAGGAA 59.050 50.000 0.00 0.00 0.00 3.36
350 351 2.172082 TCGGTTCTAGGAGATCGAAGGA 59.828 50.000 0.00 0.00 31.10 3.36
351 352 2.291190 GTCGGTTCTAGGAGATCGAAGG 59.709 54.545 0.00 0.00 34.11 3.46
352 353 2.032722 CGTCGGTTCTAGGAGATCGAAG 60.033 54.545 0.00 0.00 34.11 3.79
353 354 1.938577 CGTCGGTTCTAGGAGATCGAA 59.061 52.381 0.00 0.00 34.11 3.71
354 355 1.579698 CGTCGGTTCTAGGAGATCGA 58.420 55.000 0.00 0.00 31.39 3.59
355 356 0.041135 GCGTCGGTTCTAGGAGATCG 60.041 60.000 0.00 0.00 0.00 3.69
356 357 0.311477 GGCGTCGGTTCTAGGAGATC 59.689 60.000 0.00 0.00 0.00 2.75
357 358 1.108132 GGGCGTCGGTTCTAGGAGAT 61.108 60.000 0.00 0.00 0.00 2.75
358 359 1.751927 GGGCGTCGGTTCTAGGAGA 60.752 63.158 0.00 0.00 0.00 3.71
359 360 2.783288 GGGGCGTCGGTTCTAGGAG 61.783 68.421 0.00 0.00 0.00 3.69
360 361 2.757099 GGGGCGTCGGTTCTAGGA 60.757 66.667 0.00 0.00 0.00 2.94
361 362 3.846430 GGGGGCGTCGGTTCTAGG 61.846 72.222 0.00 0.00 0.00 3.02
362 363 2.758737 AGGGGGCGTCGGTTCTAG 60.759 66.667 0.00 0.00 0.00 2.43
363 364 2.757099 GAGGGGGCGTCGGTTCTA 60.757 66.667 0.00 0.00 0.00 2.10
365 366 3.540367 TTTGAGGGGGCGTCGGTTC 62.540 63.158 0.00 0.00 0.00 3.62
366 367 3.546714 CTTTGAGGGGGCGTCGGTT 62.547 63.158 0.00 0.00 0.00 4.44
367 368 4.016706 CTTTGAGGGGGCGTCGGT 62.017 66.667 0.00 0.00 0.00 4.69
368 369 4.778143 CCTTTGAGGGGGCGTCGG 62.778 72.222 0.00 0.00 0.00 4.79
369 370 2.925162 GATCCTTTGAGGGGGCGTCG 62.925 65.000 0.00 0.00 35.59 5.12
370 371 1.153147 GATCCTTTGAGGGGGCGTC 60.153 63.158 0.00 0.00 35.59 5.19
371 372 2.998949 GATCCTTTGAGGGGGCGT 59.001 61.111 0.00 0.00 35.59 5.68
372 373 2.203070 CGATCCTTTGAGGGGGCG 60.203 66.667 0.00 0.00 35.59 6.13
373 374 2.517166 GCGATCCTTTGAGGGGGC 60.517 66.667 0.00 0.00 35.59 5.80
374 375 2.193248 GGCGATCCTTTGAGGGGG 59.807 66.667 0.00 0.00 35.59 5.40
375 376 2.203070 CGGCGATCCTTTGAGGGG 60.203 66.667 0.00 0.00 35.59 4.79
376 377 1.815421 CACGGCGATCCTTTGAGGG 60.815 63.158 16.62 0.00 35.59 4.30
377 378 1.079127 ACACGGCGATCCTTTGAGG 60.079 57.895 16.62 0.00 36.46 3.86
378 379 0.108615 AGACACGGCGATCCTTTGAG 60.109 55.000 16.62 0.00 0.00 3.02
379 380 0.108804 GAGACACGGCGATCCTTTGA 60.109 55.000 16.62 0.00 0.00 2.69
380 381 0.108615 AGAGACACGGCGATCCTTTG 60.109 55.000 16.62 1.84 0.00 2.77
381 382 0.608640 AAGAGACACGGCGATCCTTT 59.391 50.000 16.62 5.39 0.00 3.11
382 383 0.173708 GAAGAGACACGGCGATCCTT 59.826 55.000 16.62 14.92 0.00 3.36
383 384 1.810532 GAAGAGACACGGCGATCCT 59.189 57.895 16.62 6.65 0.00 3.24
384 385 1.586564 CGAAGAGACACGGCGATCC 60.587 63.158 16.62 0.90 0.00 3.36
385 386 1.586564 CCGAAGAGACACGGCGATC 60.587 63.158 16.62 11.13 42.55 3.69
386 387 2.490217 CCGAAGAGACACGGCGAT 59.510 61.111 16.62 0.00 42.55 4.58
387 388 3.744719 CCCGAAGAGACACGGCGA 61.745 66.667 16.62 0.00 46.59 5.54
388 389 3.744719 TCCCGAAGAGACACGGCG 61.745 66.667 4.80 4.80 46.59 6.46
389 390 2.126031 GTCCCGAAGAGACACGGC 60.126 66.667 0.00 0.00 46.59 5.68
391 392 0.731417 ATACGTCCCGAAGAGACACG 59.269 55.000 0.00 0.00 33.76 4.49
392 393 4.361451 TTTATACGTCCCGAAGAGACAC 57.639 45.455 0.00 0.00 33.76 3.67
393 394 4.142315 CCTTTTATACGTCCCGAAGAGACA 60.142 45.833 0.00 0.00 33.76 3.41
394 395 4.357996 CCTTTTATACGTCCCGAAGAGAC 58.642 47.826 0.00 0.00 0.00 3.36
395 396 3.382546 CCCTTTTATACGTCCCGAAGAGA 59.617 47.826 0.00 0.00 0.00 3.10
396 397 3.492137 CCCCTTTTATACGTCCCGAAGAG 60.492 52.174 0.00 0.00 0.00 2.85
397 398 2.431782 CCCCTTTTATACGTCCCGAAGA 59.568 50.000 0.00 0.00 0.00 2.87
398 399 2.484241 CCCCCTTTTATACGTCCCGAAG 60.484 54.545 0.00 0.00 0.00 3.79
399 400 1.485895 CCCCCTTTTATACGTCCCGAA 59.514 52.381 0.00 0.00 0.00 4.30
400 401 1.122227 CCCCCTTTTATACGTCCCGA 58.878 55.000 0.00 0.00 0.00 5.14
401 402 0.533531 GCCCCCTTTTATACGTCCCG 60.534 60.000 0.00 0.00 0.00 5.14
402 403 0.179009 GGCCCCCTTTTATACGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
403 404 0.841961 AGGCCCCCTTTTATACGTCC 59.158 55.000 0.00 0.00 0.00 4.79
404 405 1.211212 ACAGGCCCCCTTTTATACGTC 59.789 52.381 0.00 0.00 0.00 4.34
405 406 1.292085 ACAGGCCCCCTTTTATACGT 58.708 50.000 0.00 0.00 0.00 3.57
406 407 3.208594 GTTACAGGCCCCCTTTTATACG 58.791 50.000 0.00 0.00 0.00 3.06
407 408 3.053470 TGGTTACAGGCCCCCTTTTATAC 60.053 47.826 0.00 0.00 0.00 1.47
408 409 3.199671 TGGTTACAGGCCCCCTTTTATA 58.800 45.455 0.00 0.00 0.00 0.98
409 410 2.004589 TGGTTACAGGCCCCCTTTTAT 58.995 47.619 0.00 0.00 0.00 1.40
410 411 1.458017 TGGTTACAGGCCCCCTTTTA 58.542 50.000 0.00 0.00 0.00 1.52
411 412 0.790339 ATGGTTACAGGCCCCCTTTT 59.210 50.000 0.00 0.00 0.00 2.27
412 413 0.790339 AATGGTTACAGGCCCCCTTT 59.210 50.000 0.00 0.00 0.00 3.11
413 414 0.041090 CAATGGTTACAGGCCCCCTT 59.959 55.000 0.00 0.00 0.00 3.95
414 415 0.849094 TCAATGGTTACAGGCCCCCT 60.849 55.000 0.00 0.00 0.00 4.79
415 416 0.261696 ATCAATGGTTACAGGCCCCC 59.738 55.000 0.00 0.00 0.00 5.40
416 417 1.064017 TGATCAATGGTTACAGGCCCC 60.064 52.381 0.00 0.00 0.00 5.80
417 418 2.435372 TGATCAATGGTTACAGGCCC 57.565 50.000 0.00 0.00 0.00 5.80
418 419 4.311816 CATTGATCAATGGTTACAGGCC 57.688 45.455 32.24 0.00 43.25 5.19
432 433 9.985318 GAATTAGAATGATCGAATCCATTGATC 57.015 33.333 13.41 0.00 39.13 2.92
433 434 9.511272 TGAATTAGAATGATCGAATCCATTGAT 57.489 29.630 13.41 6.83 33.57 2.57
434 435 8.907222 TGAATTAGAATGATCGAATCCATTGA 57.093 30.769 13.41 2.42 33.57 2.57
435 436 9.955208 TTTGAATTAGAATGATCGAATCCATTG 57.045 29.630 13.41 0.00 33.57 2.82
437 438 9.956720 GTTTTGAATTAGAATGATCGAATCCAT 57.043 29.630 0.00 0.00 30.71 3.41
438 439 8.955388 TGTTTTGAATTAGAATGATCGAATCCA 58.045 29.630 0.00 0.00 30.71 3.41
439 440 9.956720 ATGTTTTGAATTAGAATGATCGAATCC 57.043 29.630 0.00 0.00 30.71 3.01
447 448 9.986833 CGTCATGTATGTTTTGAATTAGAATGA 57.013 29.630 0.00 0.00 0.00 2.57
448 449 9.225201 CCGTCATGTATGTTTTGAATTAGAATG 57.775 33.333 0.00 0.00 0.00 2.67
449 450 7.915397 GCCGTCATGTATGTTTTGAATTAGAAT 59.085 33.333 0.00 0.00 0.00 2.40
450 451 7.247728 GCCGTCATGTATGTTTTGAATTAGAA 58.752 34.615 0.00 0.00 0.00 2.10
451 452 6.456315 CGCCGTCATGTATGTTTTGAATTAGA 60.456 38.462 0.00 0.00 0.00 2.10
452 453 5.676744 CGCCGTCATGTATGTTTTGAATTAG 59.323 40.000 0.00 0.00 0.00 1.73
453 454 5.564768 CGCCGTCATGTATGTTTTGAATTA 58.435 37.500 0.00 0.00 0.00 1.40
454 455 4.411327 CGCCGTCATGTATGTTTTGAATT 58.589 39.130 0.00 0.00 0.00 2.17
455 456 3.730662 GCGCCGTCATGTATGTTTTGAAT 60.731 43.478 0.00 0.00 0.00 2.57
456 457 2.413502 GCGCCGTCATGTATGTTTTGAA 60.414 45.455 0.00 0.00 0.00 2.69
457 458 1.129624 GCGCCGTCATGTATGTTTTGA 59.870 47.619 0.00 0.00 0.00 2.69
458 459 1.130373 AGCGCCGTCATGTATGTTTTG 59.870 47.619 2.29 0.00 0.00 2.44
459 460 1.130373 CAGCGCCGTCATGTATGTTTT 59.870 47.619 2.29 0.00 0.00 2.43
460 461 0.726827 CAGCGCCGTCATGTATGTTT 59.273 50.000 2.29 0.00 0.00 2.83
461 462 1.089481 CCAGCGCCGTCATGTATGTT 61.089 55.000 2.29 0.00 0.00 2.71
462 463 1.521457 CCAGCGCCGTCATGTATGT 60.521 57.895 2.29 0.00 0.00 2.29
463 464 2.246739 CCCAGCGCCGTCATGTATG 61.247 63.158 2.29 0.00 0.00 2.39
464 465 2.108976 CCCAGCGCCGTCATGTAT 59.891 61.111 2.29 0.00 0.00 2.29
465 466 4.155733 CCCCAGCGCCGTCATGTA 62.156 66.667 2.29 0.00 0.00 2.29
493 494 3.291101 ATCGCAAGTACACCGCCGT 62.291 57.895 0.00 0.00 39.48 5.68
498 499 3.497879 GCCCATCGCAAGTACACC 58.502 61.111 0.00 0.00 37.47 4.16
519 520 1.153309 GGTATGGGTACACACGCCC 60.153 63.158 0.00 0.00 45.04 6.13
520 521 0.461339 CAGGTATGGGTACACACGCC 60.461 60.000 0.00 5.74 36.81 5.68
521 522 0.533491 TCAGGTATGGGTACACACGC 59.467 55.000 0.00 0.00 38.08 5.34
522 523 1.822990 AGTCAGGTATGGGTACACACG 59.177 52.381 0.00 0.00 32.25 4.49
523 524 4.038883 GGATAGTCAGGTATGGGTACACAC 59.961 50.000 0.00 0.00 32.25 3.82
524 525 4.220724 GGATAGTCAGGTATGGGTACACA 58.779 47.826 0.00 0.00 32.25 3.72
530 531 0.243907 CGCGGATAGTCAGGTATGGG 59.756 60.000 0.00 0.00 0.00 4.00
535 536 2.491022 GCTCCGCGGATAGTCAGGT 61.491 63.158 31.19 0.00 0.00 4.00
540 541 3.900892 CACGGCTCCGCGGATAGT 61.901 66.667 31.19 24.47 44.19 2.12
555 556 1.118838 ACTCTATCTCTGGCTGCCAC 58.881 55.000 19.30 0.00 0.00 5.01
570 571 1.342175 CCTCCCCGACCTCTAAACTCT 60.342 57.143 0.00 0.00 0.00 3.24
579 580 2.001269 CATTTCCCCTCCCCGACCT 61.001 63.158 0.00 0.00 0.00 3.85
628 637 2.183555 GGGACATGACCGACCGAC 59.816 66.667 8.14 0.00 0.00 4.79
635 644 0.885879 GGAAAAACCGGGACATGACC 59.114 55.000 6.32 5.56 0.00 4.02
636 645 1.905637 AGGAAAAACCGGGACATGAC 58.094 50.000 6.32 0.00 44.74 3.06
637 646 2.668144 AAGGAAAAACCGGGACATGA 57.332 45.000 6.32 0.00 44.74 3.07
638 647 3.320826 AGAAAAGGAAAAACCGGGACATG 59.679 43.478 6.32 0.00 44.74 3.21
639 648 3.572642 AGAAAAGGAAAAACCGGGACAT 58.427 40.909 6.32 0.00 44.74 3.06
681 690 0.038526 TCGAGAACTTTGACGGAGCC 60.039 55.000 0.00 0.00 0.00 4.70
688 697 0.457853 CCGGCGATCGAGAACTTTGA 60.458 55.000 21.57 0.00 42.43 2.69
710 719 0.892755 TCTTTCGCCCAGTACGTCAT 59.107 50.000 0.00 0.00 0.00 3.06
731 740 4.218417 TGGCAAAAGGCTAGAAATTGTCTC 59.782 41.667 0.00 0.00 44.01 3.36
783 793 3.635591 CCAAATAGAAATGGTCAGGCCT 58.364 45.455 0.00 0.00 38.35 5.19
786 796 5.404466 TTTGCCAAATAGAAATGGTCAGG 57.596 39.130 0.00 0.00 39.00 3.86
800 810 3.260884 ACGGAGAGAGAGTATTTGCCAAA 59.739 43.478 0.00 0.00 0.00 3.28
803 813 3.131400 AGAACGGAGAGAGAGTATTTGCC 59.869 47.826 0.00 0.00 0.00 4.52
813 823 4.170256 GCAGACTAAAAGAACGGAGAGAG 58.830 47.826 0.00 0.00 0.00 3.20
814 824 3.572682 TGCAGACTAAAAGAACGGAGAGA 59.427 43.478 0.00 0.00 0.00 3.10
816 826 4.245660 CATGCAGACTAAAAGAACGGAGA 58.754 43.478 0.00 0.00 0.00 3.71
817 827 3.997021 ACATGCAGACTAAAAGAACGGAG 59.003 43.478 0.00 0.00 0.00 4.63
818 828 4.002906 ACATGCAGACTAAAAGAACGGA 57.997 40.909 0.00 0.00 0.00 4.69
819 829 4.330074 CCTACATGCAGACTAAAAGAACGG 59.670 45.833 0.00 0.00 0.00 4.44
820 830 4.929808 ACCTACATGCAGACTAAAAGAACG 59.070 41.667 0.00 0.00 0.00 3.95
821 831 6.803154 AACCTACATGCAGACTAAAAGAAC 57.197 37.500 0.00 0.00 0.00 3.01
823 833 6.293955 GCAAAACCTACATGCAGACTAAAAGA 60.294 38.462 0.00 0.00 39.81 2.52
824 834 5.858581 GCAAAACCTACATGCAGACTAAAAG 59.141 40.000 0.00 0.00 39.81 2.27
825 835 5.534654 AGCAAAACCTACATGCAGACTAAAA 59.465 36.000 0.00 0.00 42.45 1.52
828 838 4.286297 AGCAAAACCTACATGCAGACTA 57.714 40.909 0.00 0.00 42.45 2.59
831 841 6.398234 TTTTAAGCAAAACCTACATGCAGA 57.602 33.333 0.00 0.00 42.45 4.26
832 842 6.867816 TGATTTTAAGCAAAACCTACATGCAG 59.132 34.615 0.00 0.00 42.45 4.41
833 843 6.753180 TGATTTTAAGCAAAACCTACATGCA 58.247 32.000 0.00 0.00 42.45 3.96
834 844 7.650834 TTGATTTTAAGCAAAACCTACATGC 57.349 32.000 0.00 0.00 36.49 4.06
844 854 7.927629 AGCAGAGATGTTTTGATTTTAAGCAAA 59.072 29.630 2.07 2.07 41.91 3.68
845 855 7.436118 AGCAGAGATGTTTTGATTTTAAGCAA 58.564 30.769 0.00 0.00 31.66 3.91
846 856 6.985117 AGCAGAGATGTTTTGATTTTAAGCA 58.015 32.000 0.00 0.00 0.00 3.91
847 857 7.880059 AAGCAGAGATGTTTTGATTTTAAGC 57.120 32.000 0.00 0.00 0.00 3.09
848 858 9.467258 TCAAAGCAGAGATGTTTTGATTTTAAG 57.533 29.630 13.86 0.00 41.63 1.85
849 859 9.248291 GTCAAAGCAGAGATGTTTTGATTTTAA 57.752 29.630 18.73 0.00 45.63 1.52
852 862 6.183360 TGGTCAAAGCAGAGATGTTTTGATTT 60.183 34.615 18.73 0.00 45.63 2.17
853 863 5.302568 TGGTCAAAGCAGAGATGTTTTGATT 59.697 36.000 18.73 0.00 45.63 2.57
854 864 4.828939 TGGTCAAAGCAGAGATGTTTTGAT 59.171 37.500 18.73 0.00 45.63 2.57
855 865 4.206375 TGGTCAAAGCAGAGATGTTTTGA 58.794 39.130 13.86 13.86 43.30 2.69
856 866 4.572985 TGGTCAAAGCAGAGATGTTTTG 57.427 40.909 10.23 10.23 40.01 2.44
857 867 5.360714 TCTTTGGTCAAAGCAGAGATGTTTT 59.639 36.000 16.20 0.00 45.48 2.43
858 868 4.889409 TCTTTGGTCAAAGCAGAGATGTTT 59.111 37.500 16.20 0.00 45.48 2.83
859 869 4.464008 TCTTTGGTCAAAGCAGAGATGTT 58.536 39.130 16.20 0.00 45.48 2.71
860 870 4.090761 TCTTTGGTCAAAGCAGAGATGT 57.909 40.909 16.20 0.00 45.48 3.06
861 871 6.939132 ATATCTTTGGTCAAAGCAGAGATG 57.061 37.500 17.47 0.00 44.10 2.90
862 872 8.027524 TCTATATCTTTGGTCAAAGCAGAGAT 57.972 34.615 16.20 14.18 45.54 2.75
864 874 8.498054 TTTCTATATCTTTGGTCAAAGCAGAG 57.502 34.615 16.20 12.91 45.48 3.35
865 875 8.862325 TTTTCTATATCTTTGGTCAAAGCAGA 57.138 30.769 16.20 12.65 45.48 4.26
888 898 1.742831 TCTGTGTGCTGCGTTCTTTTT 59.257 42.857 0.00 0.00 0.00 1.94
889 899 1.331756 CTCTGTGTGCTGCGTTCTTTT 59.668 47.619 0.00 0.00 0.00 2.27
890 900 0.940126 CTCTGTGTGCTGCGTTCTTT 59.060 50.000 0.00 0.00 0.00 2.52
891 901 0.882042 CCTCTGTGTGCTGCGTTCTT 60.882 55.000 0.00 0.00 0.00 2.52
892 902 1.301244 CCTCTGTGTGCTGCGTTCT 60.301 57.895 0.00 0.00 0.00 3.01
893 903 1.595382 ACCTCTGTGTGCTGCGTTC 60.595 57.895 0.00 0.00 0.00 3.95
894 904 1.889105 CACCTCTGTGTGCTGCGTT 60.889 57.895 0.00 0.00 37.72 4.84
895 905 2.280389 CACCTCTGTGTGCTGCGT 60.280 61.111 0.00 0.00 37.72 5.24
896 906 3.046087 CCACCTCTGTGTGCTGCG 61.046 66.667 0.00 0.00 41.09 5.18
897 907 2.670934 CCCACCTCTGTGTGCTGC 60.671 66.667 0.00 0.00 41.09 5.25
898 908 2.033141 CCCCACCTCTGTGTGCTG 59.967 66.667 0.00 0.00 41.09 4.41
899 909 3.252284 CCCCCACCTCTGTGTGCT 61.252 66.667 0.00 0.00 41.09 4.40
901 911 3.557903 CTGCCCCCACCTCTGTGTG 62.558 68.421 0.00 0.00 41.09 3.82
902 912 3.252284 CTGCCCCCACCTCTGTGT 61.252 66.667 0.00 0.00 41.09 3.72
903 913 4.039092 CCTGCCCCCACCTCTGTG 62.039 72.222 0.00 0.00 42.39 3.66
935 945 2.216750 TACGTGCTCTGGCCGTTACC 62.217 60.000 0.00 0.00 42.19 2.85
941 951 1.226603 CGTACTACGTGCTCTGGCC 60.227 63.158 0.00 0.00 36.74 5.36
952 962 2.554769 GTATCAGCGCGTACGTACTAC 58.445 52.381 22.55 13.69 42.83 2.73
953 963 1.526887 GGTATCAGCGCGTACGTACTA 59.473 52.381 22.55 4.48 42.83 1.82
954 964 0.305922 GGTATCAGCGCGTACGTACT 59.694 55.000 22.55 11.60 42.83 2.73
955 965 0.305922 AGGTATCAGCGCGTACGTAC 59.694 55.000 17.90 15.90 42.83 3.67
960 970 1.359117 GCTCAGGTATCAGCGCGTA 59.641 57.895 8.43 0.00 0.00 4.42
962 972 2.104928 TGCTCAGGTATCAGCGCG 59.895 61.111 0.00 0.00 38.59 6.86
964 974 0.179137 TTCGTGCTCAGGTATCAGCG 60.179 55.000 0.00 0.00 38.59 5.18
967 977 3.741029 GCTTCGTGCTCAGGTATCA 57.259 52.632 0.00 0.00 38.95 2.15
990 1000 1.083847 CATGTGCATGATCGACGCG 60.084 57.895 3.53 3.53 41.20 6.01
991 1001 1.368493 GCATGTGCATGATCGACGC 60.368 57.895 15.53 0.00 41.20 5.19
992 1002 4.886982 GCATGTGCATGATCGACG 57.113 55.556 15.53 0.00 41.20 5.12
1234 1247 4.704103 AGACTGCGGCTGGGAGGA 62.704 66.667 11.64 0.00 38.63 3.71
1235 1248 4.463879 CAGACTGCGGCTGGGAGG 62.464 72.222 11.64 0.00 38.63 4.30
1237 1250 2.283604 TACAGACTGCGGCTGGGA 60.284 61.111 17.55 6.04 37.69 4.37
1251 1276 3.690139 TCTTTTTCGCAAACCACACTACA 59.310 39.130 0.00 0.00 0.00 2.74
1254 1279 2.477189 CGTCTTTTTCGCAAACCACACT 60.477 45.455 0.00 0.00 0.00 3.55
1293 1318 1.810030 GGACTCGTTGGTGGCGATC 60.810 63.158 0.00 0.00 37.74 3.69
1306 1331 2.333417 TGACGCTGAGGACGGACTC 61.333 63.158 2.07 2.07 37.99 3.36
1421 1449 1.153765 CGAGCATTGCCAGAGTCGA 60.154 57.895 10.66 0.00 0.00 4.20
1830 1861 0.742281 CAGTGTCCATCCTGGCGAAG 60.742 60.000 0.00 0.00 37.47 3.79
1980 2020 0.251653 TCTCCACGCAGTAAGACCCT 60.252 55.000 0.00 0.00 41.61 4.34
2137 2177 0.669318 GTGTTGGGCATCTCGACGAA 60.669 55.000 0.00 0.00 0.00 3.85
2207 2247 1.449246 CAGTAGCTCCTGCACTGCC 60.449 63.158 0.78 0.00 39.47 4.85
2313 2353 1.862147 CGTCGTCGTGATGTCGTCC 60.862 63.158 0.00 0.00 0.00 4.79
2320 2360 1.978712 ATCAGCGTCGTCGTCGTGAT 61.979 55.000 13.09 15.45 39.49 3.06
2359 2399 0.179081 GGTCCATCCGTGTAAGGAGC 60.179 60.000 0.00 0.00 44.55 4.70
2544 2599 1.127567 TGGTGGCTTGGTGTAGCTCT 61.128 55.000 0.00 0.00 40.99 4.09
3213 3272 2.873472 GACCGTCTCATCGTCATCTACT 59.127 50.000 0.00 0.00 0.00 2.57
3318 3380 1.634459 TCTACCTTCTCCACGTCCTCT 59.366 52.381 0.00 0.00 0.00 3.69
3325 3387 2.416162 CGAACTGCTCTACCTTCTCCAC 60.416 54.545 0.00 0.00 0.00 4.02
3332 3394 2.182030 GCGCGAACTGCTCTACCT 59.818 61.111 12.10 0.00 43.27 3.08
3418 3480 1.995626 CCCCGTTCCTGGTCTCCAT 60.996 63.158 0.00 0.00 30.82 3.41
3507 3572 0.532573 ATCCGCGTGTCACTCAATCT 59.467 50.000 4.92 0.00 0.00 2.40
3596 3665 2.461300 TGAATGACCACCCCACAAAA 57.539 45.000 0.00 0.00 0.00 2.44
3631 3700 5.496556 TCTTTGGATTTACGATCCACATGT 58.503 37.500 7.23 0.00 46.90 3.21
3799 3872 7.984422 TGTGTGTGACAGAATTCTTCAATAT 57.016 32.000 4.86 0.00 0.00 1.28
3835 3908 1.076677 ACAGTCCGGTCCTCCTAAAGA 59.923 52.381 0.00 0.00 0.00 2.52
3848 3921 0.389948 GACTAAGGTGCCACAGTCCG 60.390 60.000 0.00 0.00 32.93 4.79
3882 3955 1.194547 CGCACCGAATACATACCATGC 59.805 52.381 0.00 0.00 0.00 4.06
3917 3990 6.820335 TGTGCAGCTACACTATTCAATAGAT 58.180 36.000 17.80 1.74 41.30 1.98
4233 4307 7.607991 CGATGATATATGAAGCCCTAGGTTTTT 59.392 37.037 8.29 0.00 32.71 1.94
4351 4428 3.489355 TGTGTTTTGATGAGAGGTGCAT 58.511 40.909 0.00 0.00 0.00 3.96
4363 4440 3.291584 TGCTACCCAACATGTGTTTTGA 58.708 40.909 0.00 0.00 35.83 2.69
4425 4513 8.190326 TCCAGTTAACTAGTTTCTTCTCATGA 57.810 34.615 14.49 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.