Multiple sequence alignment - TraesCS7A01G074800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G074800 chr7A 100.000 3559 0 0 1 3559 40442711 40446269 0.000000e+00 6573.0
1 TraesCS7A01G074800 chr7A 99.061 2876 18 7 1 2871 40443944 40441073 0.000000e+00 5153.0
2 TraesCS7A01G074800 chr4A 98.395 2243 35 1 630 2871 607930289 607932531 0.000000e+00 3941.0
3 TraesCS7A01G074800 chr4A 96.975 628 17 2 1 626 607930894 607930267 0.000000e+00 1053.0
4 TraesCS7A01G074800 chr2A 98.396 2244 28 3 630 2871 58709486 58707249 0.000000e+00 3938.0
5 TraesCS7A01G074800 chr2A 97.949 1658 26 3 630 2285 58715826 58714175 0.000000e+00 2867.0
6 TraesCS7A01G074800 chr2A 96.178 628 17 4 1 626 58708886 58709508 0.000000e+00 1020.0
7 TraesCS7A01G074800 chr2A 96.019 628 17 3 1 626 58715227 58715848 0.000000e+00 1014.0
8 TraesCS7A01G074800 chr5A 98.055 1234 21 3 801 2032 626097893 626096661 0.000000e+00 2143.0
9 TraesCS7A01G074800 chr5A 98.180 824 14 1 2025 2848 626093593 626092771 0.000000e+00 1437.0
10 TraesCS7A01G074800 chr5A 96.552 435 13 2 1 433 626097459 626097893 0.000000e+00 719.0
11 TraesCS7A01G074800 chr5A 81.528 563 72 17 1 561 448597936 448597404 5.460000e-118 435.0
12 TraesCS7A01G074800 chr5A 95.783 166 6 1 461 626 626097891 626098055 2.110000e-67 267.0
13 TraesCS7A01G074800 chr5A 96.552 145 4 1 630 774 626098033 626097890 4.590000e-59 239.0
14 TraesCS7A01G074800 chr5A 98.095 105 1 1 1336 1440 626097255 626097152 7.850000e-42 182.0
15 TraesCS7A01G074800 chr4D 95.423 852 33 3 2025 2870 506238732 506237881 0.000000e+00 1352.0
16 TraesCS7A01G074800 chr4D 93.505 816 43 7 630 1440 506241531 506240721 0.000000e+00 1205.0
17 TraesCS7A01G074800 chr4D 92.663 627 38 5 1 622 506240926 506241549 0.000000e+00 896.0
18 TraesCS7A01G074800 chr4D 81.762 647 89 15 675 1314 20140466 20139842 6.810000e-142 514.0
19 TraesCS7A01G074800 chr4D 81.062 565 83 14 1 559 20139920 20140466 2.540000e-116 429.0
20 TraesCS7A01G074800 chr4D 88.172 93 9 2 3300 3392 352524289 352524379 3.760000e-20 110.0
21 TraesCS7A01G074800 chr2D 92.308 598 40 4 1439 2032 646482088 646482683 0.000000e+00 845.0
22 TraesCS7A01G074800 chr2D 83.377 770 88 17 673 1440 646481457 646482188 0.000000e+00 676.0
23 TraesCS7A01G074800 chr2D 86.434 516 51 11 2363 2871 646486012 646486515 6.720000e-152 547.0
24 TraesCS7A01G074800 chr2D 86.310 504 50 11 2375 2871 50044299 50043808 6.770000e-147 531.0
25 TraesCS7A01G074800 chr2D 83.156 564 68 12 1 561 646481996 646481457 1.150000e-134 490.0
26 TraesCS7A01G074800 chr7D 92.154 599 40 5 1439 2032 628244754 628244158 0.000000e+00 839.0
27 TraesCS7A01G074800 chr7D 83.398 771 87 17 673 1440 628245385 628244653 0.000000e+00 676.0
28 TraesCS7A01G074800 chr7D 86.337 505 50 11 2375 2872 628240818 628240326 1.880000e-147 532.0
29 TraesCS7A01G074800 chr7D 91.120 259 11 3 2872 3128 40878132 40878380 1.220000e-89 340.0
30 TraesCS7A01G074800 chr7D 89.583 96 9 1 3298 3392 63396800 63396895 1.740000e-23 121.0
31 TraesCS7A01G074800 chr5B 91.973 598 42 4 1439 2032 593548911 593549506 0.000000e+00 833.0
32 TraesCS7A01G074800 chr5B 89.796 98 8 2 3296 3392 652624959 652624863 1.340000e-24 124.0
33 TraesCS7A01G074800 chr7B 91.987 599 39 7 1437 2032 21808411 21809003 0.000000e+00 832.0
34 TraesCS7A01G074800 chr7B 86.364 198 22 4 1238 1434 21808313 21808506 1.000000e-50 211.0
35 TraesCS7A01G074800 chr7B 85.859 99 14 0 3294 3392 706247389 706247487 4.860000e-19 106.0
36 TraesCS7A01G074800 chr1A 83.126 883 100 29 2020 2872 471478553 471479416 0.000000e+00 760.0
37 TraesCS7A01G074800 chr3D 82.899 883 104 29 2020 2872 563981740 563980875 0.000000e+00 750.0
38 TraesCS7A01G074800 chr3D 90.526 95 7 2 3299 3392 474660331 474660424 1.340000e-24 124.0
39 TraesCS7A01G074800 chr3D 85.882 85 5 3 2922 3005 560881092 560881014 2.280000e-12 84.2
40 TraesCS7A01G074800 chr5D 81.023 880 108 39 2020 2851 561626837 561625969 0.000000e+00 645.0
41 TraesCS7A01G074800 chr5D 88.421 95 9 2 3299 3392 434366586 434366493 2.900000e-21 113.0
42 TraesCS7A01G074800 chr6A 89.474 95 6 1 3298 3392 78477380 78477290 2.240000e-22 117.0
43 TraesCS7A01G074800 chr3A 89.362 94 7 2 3301 3392 346186157 346186065 8.070000e-22 115.0
44 TraesCS7A01G074800 chr3A 88.542 96 4 5 2871 2964 696877880 696877790 3.760000e-20 110.0
45 TraesCS7A01G074800 chr3A 87.500 96 5 5 2871 2964 696832447 696832357 1.750000e-18 104.0
46 TraesCS7A01G074800 chr3A 86.458 96 6 5 2871 2964 696781829 696781739 8.130000e-17 99.0
47 TraesCS7A01G074800 chr3A 85.417 96 7 5 2871 2964 696854924 696854834 3.780000e-15 93.5
48 TraesCS7A01G074800 chr4B 89.247 93 7 2 3299 3391 190834845 190834756 2.900000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G074800 chr7A 40442711 40446269 3558 False 6573.000000 6573 100.000000 1 3559 1 chr7A.!!$F1 3558
1 TraesCS7A01G074800 chr7A 40441073 40443944 2871 True 5153.000000 5153 99.061000 1 2871 1 chr7A.!!$R1 2870
2 TraesCS7A01G074800 chr4A 607930289 607932531 2242 False 3941.000000 3941 98.395000 630 2871 1 chr4A.!!$F1 2241
3 TraesCS7A01G074800 chr4A 607930267 607930894 627 True 1053.000000 1053 96.975000 1 626 1 chr4A.!!$R1 625
4 TraesCS7A01G074800 chr2A 58707249 58709486 2237 True 3938.000000 3938 98.396000 630 2871 1 chr2A.!!$R1 2241
5 TraesCS7A01G074800 chr2A 58714175 58715826 1651 True 2867.000000 2867 97.949000 630 2285 1 chr2A.!!$R2 1655
6 TraesCS7A01G074800 chr2A 58708886 58709508 622 False 1020.000000 1020 96.178000 1 626 1 chr2A.!!$F1 625
7 TraesCS7A01G074800 chr2A 58715227 58715848 621 False 1014.000000 1014 96.019000 1 626 1 chr2A.!!$F2 625
8 TraesCS7A01G074800 chr5A 626092771 626098033 5262 True 1000.250000 2143 97.720500 630 2848 4 chr5A.!!$R2 2218
9 TraesCS7A01G074800 chr5A 626097459 626098055 596 False 493.000000 719 96.167500 1 626 2 chr5A.!!$F1 625
10 TraesCS7A01G074800 chr5A 448597404 448597936 532 True 435.000000 435 81.528000 1 561 1 chr5A.!!$R1 560
11 TraesCS7A01G074800 chr4D 506237881 506241531 3650 True 1278.500000 1352 94.464000 630 2870 2 chr4D.!!$R2 2240
12 TraesCS7A01G074800 chr4D 506240926 506241549 623 False 896.000000 896 92.663000 1 622 1 chr4D.!!$F3 621
13 TraesCS7A01G074800 chr4D 20139842 20140466 624 True 514.000000 514 81.762000 675 1314 1 chr4D.!!$R1 639
14 TraesCS7A01G074800 chr4D 20139920 20140466 546 False 429.000000 429 81.062000 1 559 1 chr4D.!!$F1 558
15 TraesCS7A01G074800 chr2D 646481457 646486515 5058 False 689.333333 845 87.373000 673 2871 3 chr2D.!!$F1 2198
16 TraesCS7A01G074800 chr2D 646481457 646481996 539 True 490.000000 490 83.156000 1 561 1 chr2D.!!$R2 560
17 TraesCS7A01G074800 chr7D 628240326 628245385 5059 True 682.333333 839 87.296333 673 2872 3 chr7D.!!$R1 2199
18 TraesCS7A01G074800 chr5B 593548911 593549506 595 False 833.000000 833 91.973000 1439 2032 1 chr5B.!!$F1 593
19 TraesCS7A01G074800 chr7B 21808313 21809003 690 False 521.500000 832 89.175500 1238 2032 2 chr7B.!!$F2 794
20 TraesCS7A01G074800 chr1A 471478553 471479416 863 False 760.000000 760 83.126000 2020 2872 1 chr1A.!!$F1 852
21 TraesCS7A01G074800 chr3D 563980875 563981740 865 True 750.000000 750 82.899000 2020 2872 1 chr3D.!!$R2 852
22 TraesCS7A01G074800 chr5D 561625969 561626837 868 True 645.000000 645 81.023000 2020 2851 1 chr5D.!!$R2 831

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
516 520 1.421268 TCTTGCAGTGGAATCAGTGGT 59.579 47.619 0.00 0.0 42.9 4.16 F
628 648 2.111043 CAGAACACGTGCTGGGGT 59.889 61.111 17.22 0.0 0.0 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2074 5250 4.053983 CCAGGACTGAATATCGTGTGATG 58.946 47.826 0.0 0.0 35.99 3.07 R
2886 6134 2.743928 GTCGTTCCAGCAGCCCAG 60.744 66.667 0.0 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
516 520 1.421268 TCTTGCAGTGGAATCAGTGGT 59.579 47.619 0.00 0.00 42.90 4.16
628 648 2.111043 CAGAACACGTGCTGGGGT 59.889 61.111 17.22 0.00 0.00 4.95
1811 1869 3.173852 TTGGCTACCCAAGACCTGA 57.826 52.632 0.00 0.00 46.01 3.86
2074 5250 5.295787 TGATGGACAACACACAGAGTAAAAC 59.704 40.000 0.00 0.00 0.00 2.43
2902 6150 4.704833 GCTGGGCTGCTGGAACGA 62.705 66.667 0.00 0.00 0.00 3.85
2903 6151 2.743928 CTGGGCTGCTGGAACGAC 60.744 66.667 0.00 0.00 0.00 4.34
2904 6152 4.680237 TGGGCTGCTGGAACGACG 62.680 66.667 0.00 0.00 0.00 5.12
2905 6153 4.373116 GGGCTGCTGGAACGACGA 62.373 66.667 0.00 0.00 0.00 4.20
2906 6154 2.125512 GGCTGCTGGAACGACGAT 60.126 61.111 0.00 0.00 0.00 3.73
2907 6155 1.741770 GGCTGCTGGAACGACGATT 60.742 57.895 0.00 0.00 0.00 3.34
2908 6156 1.696832 GGCTGCTGGAACGACGATTC 61.697 60.000 0.00 1.64 0.00 2.52
2930 6178 4.204891 GACGAATTCGGCGTGCGG 62.205 66.667 29.79 2.08 42.77 5.69
2948 6196 3.047877 CGTGCGGGACTTGGGTTC 61.048 66.667 0.00 0.00 0.00 3.62
2949 6197 2.671963 GTGCGGGACTTGGGTTCC 60.672 66.667 0.00 0.00 37.75 3.62
2950 6198 3.961414 TGCGGGACTTGGGTTCCC 61.961 66.667 0.12 0.12 37.85 3.97
2951 6199 4.735358 GCGGGACTTGGGTTCCCC 62.735 72.222 5.34 0.00 45.71 4.81
2952 6200 2.933834 CGGGACTTGGGTTCCCCT 60.934 66.667 5.34 0.00 45.70 4.79
2953 6201 2.535331 CGGGACTTGGGTTCCCCTT 61.535 63.158 5.34 0.00 45.70 3.95
2954 6202 1.858505 GGGACTTGGGTTCCCCTTT 59.141 57.895 5.34 0.00 45.70 3.11
2955 6203 0.251653 GGGACTTGGGTTCCCCTTTC 60.252 60.000 5.34 0.00 45.70 2.62
2956 6204 0.608308 GGACTTGGGTTCCCCTTTCG 60.608 60.000 5.34 0.00 45.70 3.46
2957 6205 0.399075 GACTTGGGTTCCCCTTTCGA 59.601 55.000 5.34 0.00 45.70 3.71
2958 6206 0.109913 ACTTGGGTTCCCCTTTCGAC 59.890 55.000 5.34 0.00 45.70 4.20
2959 6207 0.109723 CTTGGGTTCCCCTTTCGACA 59.890 55.000 5.34 0.00 45.70 4.35
2960 6208 0.179012 TTGGGTTCCCCTTTCGACAC 60.179 55.000 5.34 0.00 45.70 3.67
2961 6209 1.670083 GGGTTCCCCTTTCGACACG 60.670 63.158 0.00 0.00 41.34 4.49
2962 6210 2.322830 GGTTCCCCTTTCGACACGC 61.323 63.158 0.00 0.00 0.00 5.34
2963 6211 1.301479 GTTCCCCTTTCGACACGCT 60.301 57.895 0.00 0.00 0.00 5.07
2964 6212 0.883370 GTTCCCCTTTCGACACGCTT 60.883 55.000 0.00 0.00 0.00 4.68
2965 6213 0.179040 TTCCCCTTTCGACACGCTTT 60.179 50.000 0.00 0.00 0.00 3.51
2966 6214 0.179040 TCCCCTTTCGACACGCTTTT 60.179 50.000 0.00 0.00 0.00 2.27
2967 6215 0.237498 CCCCTTTCGACACGCTTTTC 59.763 55.000 0.00 0.00 0.00 2.29
2968 6216 1.226746 CCCTTTCGACACGCTTTTCT 58.773 50.000 0.00 0.00 0.00 2.52
2969 6217 1.194772 CCCTTTCGACACGCTTTTCTC 59.805 52.381 0.00 0.00 0.00 2.87
2970 6218 1.194772 CCTTTCGACACGCTTTTCTCC 59.805 52.381 0.00 0.00 0.00 3.71
2971 6219 2.135933 CTTTCGACACGCTTTTCTCCT 58.864 47.619 0.00 0.00 0.00 3.69
2972 6220 1.779569 TTCGACACGCTTTTCTCCTC 58.220 50.000 0.00 0.00 0.00 3.71
2973 6221 0.959553 TCGACACGCTTTTCTCCTCT 59.040 50.000 0.00 0.00 0.00 3.69
2974 6222 1.068472 TCGACACGCTTTTCTCCTCTC 60.068 52.381 0.00 0.00 0.00 3.20
2975 6223 1.068194 CGACACGCTTTTCTCCTCTCT 60.068 52.381 0.00 0.00 0.00 3.10
2976 6224 2.333014 GACACGCTTTTCTCCTCTCTG 58.667 52.381 0.00 0.00 0.00 3.35
2977 6225 1.001406 ACACGCTTTTCTCCTCTCTGG 59.999 52.381 0.00 0.00 37.10 3.86
2978 6226 0.610687 ACGCTTTTCTCCTCTCTGGG 59.389 55.000 0.00 0.00 36.20 4.45
2979 6227 0.107945 CGCTTTTCTCCTCTCTGGGG 60.108 60.000 0.00 0.00 37.77 4.96
2980 6228 0.254462 GCTTTTCTCCTCTCTGGGGG 59.746 60.000 0.00 0.00 36.78 5.40
2996 6244 1.796017 GGGGGTTTGGAAACTTTGGA 58.204 50.000 2.44 0.00 38.89 3.53
2997 6245 2.334977 GGGGGTTTGGAAACTTTGGAT 58.665 47.619 2.44 0.00 38.89 3.41
2998 6246 2.038426 GGGGGTTTGGAAACTTTGGATG 59.962 50.000 2.44 0.00 38.89 3.51
2999 6247 2.549992 GGGGTTTGGAAACTTTGGATGC 60.550 50.000 2.44 0.00 38.89 3.91
3000 6248 2.403259 GGTTTGGAAACTTTGGATGCG 58.597 47.619 2.44 0.00 38.89 4.73
3001 6249 2.403259 GTTTGGAAACTTTGGATGCGG 58.597 47.619 0.00 0.00 36.03 5.69
3002 6250 0.965439 TTGGAAACTTTGGATGCGGG 59.035 50.000 0.00 0.00 0.00 6.13
3003 6251 0.178975 TGGAAACTTTGGATGCGGGT 60.179 50.000 0.00 0.00 0.00 5.28
3004 6252 0.243636 GGAAACTTTGGATGCGGGTG 59.756 55.000 0.00 0.00 0.00 4.61
3005 6253 0.388520 GAAACTTTGGATGCGGGTGC 60.389 55.000 0.00 0.00 43.20 5.01
3030 6278 2.102474 GGATACGAGTACGAGTGTGC 57.898 55.000 6.54 2.26 42.66 4.57
3031 6279 1.594034 GGATACGAGTACGAGTGTGCG 60.594 57.143 6.54 0.00 42.66 5.34
3033 6281 0.164432 TACGAGTACGAGTGTGCGTG 59.836 55.000 0.00 0.00 45.23 5.34
3034 6282 1.796355 CGAGTACGAGTGTGCGTGG 60.796 63.158 0.00 0.00 45.23 4.94
3035 6283 1.443872 GAGTACGAGTGTGCGTGGG 60.444 63.158 0.00 0.00 45.23 4.61
3036 6284 3.110178 GTACGAGTGTGCGTGGGC 61.110 66.667 0.00 0.00 45.23 5.36
3074 6322 2.433664 CGTGCCAACCCGGACTAC 60.434 66.667 0.73 0.00 36.56 2.73
3075 6323 2.433664 GTGCCAACCCGGACTACG 60.434 66.667 0.73 0.00 43.80 3.51
3076 6324 2.918802 TGCCAACCCGGACTACGT 60.919 61.111 0.73 0.00 42.24 3.57
3077 6325 2.433664 GCCAACCCGGACTACGTG 60.434 66.667 0.73 0.00 42.24 4.49
3078 6326 2.263540 CCAACCCGGACTACGTGG 59.736 66.667 0.73 0.00 42.24 4.94
3079 6327 2.433664 CAACCCGGACTACGTGGC 60.434 66.667 0.73 0.00 42.24 5.01
3080 6328 2.918802 AACCCGGACTACGTGGCA 60.919 61.111 0.73 0.00 42.24 4.92
3081 6329 3.230522 AACCCGGACTACGTGGCAC 62.231 63.158 7.79 7.79 42.24 5.01
3082 6330 3.379445 CCCGGACTACGTGGCACT 61.379 66.667 16.72 5.47 42.24 4.40
3083 6331 2.126071 CCGGACTACGTGGCACTG 60.126 66.667 16.72 11.66 42.24 3.66
3084 6332 2.632544 CCGGACTACGTGGCACTGA 61.633 63.158 16.72 1.95 42.24 3.41
3085 6333 1.287815 CGGACTACGTGGCACTGAA 59.712 57.895 16.72 0.00 37.93 3.02
3086 6334 0.319211 CGGACTACGTGGCACTGAAA 60.319 55.000 16.72 3.24 37.93 2.69
3087 6335 1.671850 CGGACTACGTGGCACTGAAAT 60.672 52.381 16.72 0.00 37.93 2.17
3088 6336 2.416296 CGGACTACGTGGCACTGAAATA 60.416 50.000 16.72 0.00 37.93 1.40
3089 6337 3.592059 GGACTACGTGGCACTGAAATAA 58.408 45.455 16.72 0.00 0.00 1.40
3090 6338 3.998341 GGACTACGTGGCACTGAAATAAA 59.002 43.478 16.72 0.00 0.00 1.40
3091 6339 4.453136 GGACTACGTGGCACTGAAATAAAA 59.547 41.667 16.72 0.00 0.00 1.52
3092 6340 5.049267 GGACTACGTGGCACTGAAATAAAAA 60.049 40.000 16.72 0.00 0.00 1.94
3116 6364 6.526566 AACGAAGTGTTTTACTGCTTCTAG 57.473 37.500 0.00 0.00 45.00 2.43
3117 6365 5.839621 ACGAAGTGTTTTACTGCTTCTAGA 58.160 37.500 0.00 0.00 42.51 2.43
3118 6366 5.921408 ACGAAGTGTTTTACTGCTTCTAGAG 59.079 40.000 0.00 0.00 42.51 2.43
3119 6367 6.150318 CGAAGTGTTTTACTGCTTCTAGAGA 58.850 40.000 0.00 0.00 40.26 3.10
3120 6368 6.641314 CGAAGTGTTTTACTGCTTCTAGAGAA 59.359 38.462 0.00 0.00 40.26 2.87
3121 6369 7.169308 CGAAGTGTTTTACTGCTTCTAGAGAAA 59.831 37.037 0.00 0.00 40.26 2.52
3122 6370 8.732746 AAGTGTTTTACTGCTTCTAGAGAAAA 57.267 30.769 0.00 0.00 40.26 2.29
3123 6371 8.371770 AGTGTTTTACTGCTTCTAGAGAAAAG 57.628 34.615 0.00 0.00 38.49 2.27
3124 6372 8.204836 AGTGTTTTACTGCTTCTAGAGAAAAGA 58.795 33.333 8.08 0.00 38.49 2.52
3125 6373 8.827677 GTGTTTTACTGCTTCTAGAGAAAAGAA 58.172 33.333 8.08 0.00 33.07 2.52
3126 6374 9.391006 TGTTTTACTGCTTCTAGAGAAAAGAAA 57.609 29.630 8.08 0.00 32.77 2.52
3130 6378 7.865706 ACTGCTTCTAGAGAAAAGAAAAACA 57.134 32.000 8.08 0.00 32.77 2.83
3131 6379 7.924940 ACTGCTTCTAGAGAAAAGAAAAACAG 58.075 34.615 8.08 0.00 36.04 3.16
3132 6380 7.554476 ACTGCTTCTAGAGAAAAGAAAAACAGT 59.446 33.333 8.08 8.71 37.13 3.55
3133 6381 7.920738 TGCTTCTAGAGAAAAGAAAAACAGTC 58.079 34.615 0.00 0.00 32.77 3.51
3134 6382 7.552687 TGCTTCTAGAGAAAAGAAAAACAGTCA 59.447 33.333 0.00 0.00 32.77 3.41
3135 6383 7.853437 GCTTCTAGAGAAAAGAAAAACAGTCAC 59.147 37.037 0.00 0.00 32.77 3.67
3136 6384 7.787725 TCTAGAGAAAAGAAAAACAGTCACC 57.212 36.000 0.00 0.00 0.00 4.02
3137 6385 5.836821 AGAGAAAAGAAAAACAGTCACCC 57.163 39.130 0.00 0.00 0.00 4.61
3138 6386 4.335594 AGAGAAAAGAAAAACAGTCACCCG 59.664 41.667 0.00 0.00 0.00 5.28
3139 6387 4.266714 AGAAAAGAAAAACAGTCACCCGA 58.733 39.130 0.00 0.00 0.00 5.14
3140 6388 4.703093 AGAAAAGAAAAACAGTCACCCGAA 59.297 37.500 0.00 0.00 0.00 4.30
3141 6389 5.359860 AGAAAAGAAAAACAGTCACCCGAAT 59.640 36.000 0.00 0.00 0.00 3.34
3142 6390 6.544564 AGAAAAGAAAAACAGTCACCCGAATA 59.455 34.615 0.00 0.00 0.00 1.75
3143 6391 6.894339 AAAGAAAAACAGTCACCCGAATAT 57.106 33.333 0.00 0.00 0.00 1.28
3144 6392 6.496338 AAGAAAAACAGTCACCCGAATATC 57.504 37.500 0.00 0.00 0.00 1.63
3145 6393 5.805728 AGAAAAACAGTCACCCGAATATCT 58.194 37.500 0.00 0.00 0.00 1.98
3146 6394 5.875359 AGAAAAACAGTCACCCGAATATCTC 59.125 40.000 0.00 0.00 0.00 2.75
3148 6396 1.067212 ACAGTCACCCGAATATCTCGC 59.933 52.381 0.00 0.00 46.71 5.03
3149 6397 0.311165 AGTCACCCGAATATCTCGCG 59.689 55.000 0.00 0.00 46.71 5.87
3150 6398 0.663568 GTCACCCGAATATCTCGCGG 60.664 60.000 6.13 0.00 46.71 6.46
3154 6402 4.916412 CGAATATCTCGCGGACGT 57.084 55.556 6.13 0.00 41.49 4.34
3155 6403 3.159446 CGAATATCTCGCGGACGTT 57.841 52.632 6.13 1.31 41.49 3.99
3156 6404 2.305252 CGAATATCTCGCGGACGTTA 57.695 50.000 6.13 0.00 41.49 3.18
3157 6405 2.231693 CGAATATCTCGCGGACGTTAG 58.768 52.381 6.13 0.00 41.49 2.34
3158 6406 2.582687 GAATATCTCGCGGACGTTAGG 58.417 52.381 6.13 0.00 41.18 2.69
3159 6407 1.602311 ATATCTCGCGGACGTTAGGT 58.398 50.000 6.13 0.00 41.18 3.08
3160 6408 1.382522 TATCTCGCGGACGTTAGGTT 58.617 50.000 6.13 0.00 41.18 3.50
3161 6409 0.529378 ATCTCGCGGACGTTAGGTTT 59.471 50.000 6.13 0.00 41.18 3.27
3162 6410 0.387622 TCTCGCGGACGTTAGGTTTG 60.388 55.000 6.13 0.00 41.18 2.93
3163 6411 1.349259 CTCGCGGACGTTAGGTTTGG 61.349 60.000 6.13 0.00 41.18 3.28
3164 6412 2.385091 CGCGGACGTTAGGTTTGGG 61.385 63.158 0.00 0.00 33.53 4.12
3165 6413 1.301953 GCGGACGTTAGGTTTGGGT 60.302 57.895 0.00 0.00 0.00 4.51
3166 6414 1.571215 GCGGACGTTAGGTTTGGGTG 61.571 60.000 0.00 0.00 0.00 4.61
3167 6415 0.033781 CGGACGTTAGGTTTGGGTGA 59.966 55.000 0.00 0.00 0.00 4.02
3168 6416 1.516161 GGACGTTAGGTTTGGGTGAC 58.484 55.000 0.00 0.00 0.00 3.67
3169 6417 1.071228 GGACGTTAGGTTTGGGTGACT 59.929 52.381 0.00 0.00 0.00 3.41
3170 6418 2.486013 GGACGTTAGGTTTGGGTGACTT 60.486 50.000 0.00 0.00 0.00 3.01
3171 6419 3.208594 GACGTTAGGTTTGGGTGACTTT 58.791 45.455 0.00 0.00 0.00 2.66
3172 6420 2.946990 ACGTTAGGTTTGGGTGACTTTG 59.053 45.455 0.00 0.00 0.00 2.77
3173 6421 3.207778 CGTTAGGTTTGGGTGACTTTGA 58.792 45.455 0.00 0.00 0.00 2.69
3174 6422 3.250040 CGTTAGGTTTGGGTGACTTTGAG 59.750 47.826 0.00 0.00 0.00 3.02
3175 6423 1.692411 AGGTTTGGGTGACTTTGAGC 58.308 50.000 0.00 0.00 0.00 4.26
3176 6424 1.064017 AGGTTTGGGTGACTTTGAGCA 60.064 47.619 0.00 0.00 0.00 4.26
3177 6425 1.338020 GGTTTGGGTGACTTTGAGCAG 59.662 52.381 0.00 0.00 0.00 4.24
3178 6426 1.032014 TTTGGGTGACTTTGAGCAGC 58.968 50.000 0.00 0.00 0.00 5.25
3179 6427 0.183492 TTGGGTGACTTTGAGCAGCT 59.817 50.000 0.00 0.00 33.33 4.24
3180 6428 1.055849 TGGGTGACTTTGAGCAGCTA 58.944 50.000 0.00 0.00 33.33 3.32
3181 6429 1.419762 TGGGTGACTTTGAGCAGCTAA 59.580 47.619 0.00 0.00 33.33 3.09
3182 6430 2.040278 TGGGTGACTTTGAGCAGCTAAT 59.960 45.455 0.00 0.00 33.33 1.73
3183 6431 2.680339 GGGTGACTTTGAGCAGCTAATC 59.320 50.000 0.00 0.00 33.33 1.75
3184 6432 3.604582 GGTGACTTTGAGCAGCTAATCT 58.395 45.455 0.00 0.00 0.00 2.40
3185 6433 3.620821 GGTGACTTTGAGCAGCTAATCTC 59.379 47.826 0.00 0.00 0.00 2.75
3186 6434 4.248859 GTGACTTTGAGCAGCTAATCTCA 58.751 43.478 0.00 8.03 37.54 3.27
3187 6435 4.692625 GTGACTTTGAGCAGCTAATCTCAA 59.307 41.667 16.55 16.55 44.70 3.02
3192 6440 4.541973 TGAGCAGCTAATCTCAAAGACA 57.458 40.909 0.00 0.00 36.50 3.41
3193 6441 4.898320 TGAGCAGCTAATCTCAAAGACAA 58.102 39.130 0.00 0.00 36.50 3.18
3194 6442 5.308014 TGAGCAGCTAATCTCAAAGACAAA 58.692 37.500 0.00 0.00 36.50 2.83
3195 6443 5.764686 TGAGCAGCTAATCTCAAAGACAAAA 59.235 36.000 0.00 0.00 36.50 2.44
3196 6444 6.262944 TGAGCAGCTAATCTCAAAGACAAAAA 59.737 34.615 0.00 0.00 36.50 1.94
3197 6445 7.040201 TGAGCAGCTAATCTCAAAGACAAAAAT 60.040 33.333 0.00 0.00 36.50 1.82
3198 6446 7.088905 AGCAGCTAATCTCAAAGACAAAAATG 58.911 34.615 0.00 0.00 0.00 2.32
3199 6447 6.865205 GCAGCTAATCTCAAAGACAAAAATGT 59.135 34.615 0.00 0.00 0.00 2.71
3200 6448 7.148853 GCAGCTAATCTCAAAGACAAAAATGTG 60.149 37.037 0.00 0.00 0.00 3.21
3201 6449 7.327761 CAGCTAATCTCAAAGACAAAAATGTGG 59.672 37.037 0.00 0.00 0.00 4.17
3202 6450 7.231317 AGCTAATCTCAAAGACAAAAATGTGGA 59.769 33.333 0.00 0.00 0.00 4.02
3203 6451 8.031277 GCTAATCTCAAAGACAAAAATGTGGAT 58.969 33.333 0.00 0.00 0.00 3.41
3204 6452 9.918630 CTAATCTCAAAGACAAAAATGTGGATT 57.081 29.630 0.00 0.00 0.00 3.01
3206 6454 9.617523 AATCTCAAAGACAAAAATGTGGATTTT 57.382 25.926 0.00 0.00 42.49 1.82
3232 6480 5.717078 TCTTAGAAAGAAGCCGAACTACA 57.283 39.130 0.00 0.00 33.83 2.74
3233 6481 5.710984 TCTTAGAAAGAAGCCGAACTACAG 58.289 41.667 0.00 0.00 33.83 2.74
3234 6482 5.243283 TCTTAGAAAGAAGCCGAACTACAGT 59.757 40.000 0.00 0.00 33.83 3.55
3235 6483 6.432162 TCTTAGAAAGAAGCCGAACTACAGTA 59.568 38.462 0.00 0.00 33.83 2.74
3236 6484 5.662674 AGAAAGAAGCCGAACTACAGTAT 57.337 39.130 0.00 0.00 0.00 2.12
3237 6485 5.411781 AGAAAGAAGCCGAACTACAGTATG 58.588 41.667 0.00 0.00 46.00 2.39
3238 6486 3.166489 AGAAGCCGAACTACAGTATGC 57.834 47.619 0.00 0.00 42.53 3.14
3239 6487 2.761208 AGAAGCCGAACTACAGTATGCT 59.239 45.455 0.00 0.00 42.53 3.79
3240 6488 3.952323 AGAAGCCGAACTACAGTATGCTA 59.048 43.478 0.00 0.00 42.53 3.49
3241 6489 4.401519 AGAAGCCGAACTACAGTATGCTAA 59.598 41.667 0.00 0.00 42.53 3.09
3242 6490 4.939052 AGCCGAACTACAGTATGCTAAT 57.061 40.909 0.00 0.00 42.53 1.73
3243 6491 6.264744 AGAAGCCGAACTACAGTATGCTAATA 59.735 38.462 0.00 0.00 42.53 0.98
3244 6492 5.770417 AGCCGAACTACAGTATGCTAATAC 58.230 41.667 0.00 0.00 42.53 1.89
3245 6493 5.301045 AGCCGAACTACAGTATGCTAATACA 59.699 40.000 0.00 0.00 42.53 2.29
3246 6494 5.981315 GCCGAACTACAGTATGCTAATACAA 59.019 40.000 0.00 0.00 42.53 2.41
3247 6495 6.074463 GCCGAACTACAGTATGCTAATACAAC 60.074 42.308 0.00 0.00 42.53 3.32
3248 6496 7.201145 CCGAACTACAGTATGCTAATACAACT 58.799 38.462 0.00 0.00 42.53 3.16
3249 6497 7.705325 CCGAACTACAGTATGCTAATACAACTT 59.295 37.037 0.00 0.00 42.53 2.66
3250 6498 8.532341 CGAACTACAGTATGCTAATACAACTTG 58.468 37.037 0.00 0.00 42.53 3.16
3251 6499 9.367444 GAACTACAGTATGCTAATACAACTTGT 57.633 33.333 0.00 0.00 42.53 3.16
3252 6500 8.703604 ACTACAGTATGCTAATACAACTTGTG 57.296 34.615 4.57 0.00 42.53 3.33
3253 6501 8.311836 ACTACAGTATGCTAATACAACTTGTGT 58.688 33.333 4.57 0.00 42.53 3.72
3254 6502 7.979444 ACAGTATGCTAATACAACTTGTGTT 57.021 32.000 8.72 8.72 42.53 3.32
3255 6503 8.391075 ACAGTATGCTAATACAACTTGTGTTT 57.609 30.769 8.96 3.84 42.53 2.83
3256 6504 9.496873 ACAGTATGCTAATACAACTTGTGTTTA 57.503 29.630 8.96 4.67 42.53 2.01
3257 6505 9.755064 CAGTATGCTAATACAACTTGTGTTTAC 57.245 33.333 8.96 6.18 41.09 2.01
3258 6506 9.496873 AGTATGCTAATACAACTTGTGTTTACA 57.503 29.630 8.96 8.31 41.09 2.41
3261 6509 9.624697 ATGCTAATACAACTTGTGTTTACATTG 57.375 29.630 8.96 0.00 41.98 2.82
3262 6510 8.625651 TGCTAATACAACTTGTGTTTACATTGT 58.374 29.630 8.96 0.00 40.89 2.71
3263 6511 9.113876 GCTAATACAACTTGTGTTTACATTGTC 57.886 33.333 8.96 0.00 38.59 3.18
3266 6514 5.890334 ACAACTTGTGTTTACATTGTCTGG 58.110 37.500 0.00 0.00 35.99 3.86
3267 6515 4.568152 ACTTGTGTTTACATTGTCTGGC 57.432 40.909 0.00 0.00 36.53 4.85
3268 6516 3.951037 ACTTGTGTTTACATTGTCTGGCA 59.049 39.130 0.00 0.00 36.53 4.92
3269 6517 4.584325 ACTTGTGTTTACATTGTCTGGCAT 59.416 37.500 0.00 0.00 36.53 4.40
3270 6518 4.764679 TGTGTTTACATTGTCTGGCATC 57.235 40.909 0.00 0.00 0.00 3.91
3271 6519 3.505680 TGTGTTTACATTGTCTGGCATCC 59.494 43.478 0.00 0.00 0.00 3.51
3272 6520 2.746904 TGTTTACATTGTCTGGCATCCG 59.253 45.455 0.00 0.00 0.00 4.18
3273 6521 2.036958 TTACATTGTCTGGCATCCGG 57.963 50.000 0.00 0.00 0.00 5.14
3274 6522 0.463654 TACATTGTCTGGCATCCGGC 60.464 55.000 0.00 0.00 43.74 6.13
3283 6531 2.258286 GCATCCGGCACAACCAAC 59.742 61.111 0.00 0.00 43.97 3.77
3284 6532 2.560119 GCATCCGGCACAACCAACA 61.560 57.895 0.00 0.00 43.97 3.33
3285 6533 2.037053 CATCCGGCACAACCAACAA 58.963 52.632 0.00 0.00 39.03 2.83
3286 6534 0.039256 CATCCGGCACAACCAACAAG 60.039 55.000 0.00 0.00 39.03 3.16
3287 6535 1.805428 ATCCGGCACAACCAACAAGC 61.805 55.000 0.00 0.00 39.03 4.01
3288 6536 2.353376 CGGCACAACCAACAAGCG 60.353 61.111 0.00 0.00 39.03 4.68
3289 6537 2.829206 CGGCACAACCAACAAGCGA 61.829 57.895 0.00 0.00 39.03 4.93
3290 6538 1.299089 GGCACAACCAACAAGCGAC 60.299 57.895 0.00 0.00 38.86 5.19
3291 6539 1.654137 GCACAACCAACAAGCGACG 60.654 57.895 0.00 0.00 0.00 5.12
3292 6540 1.654137 CACAACCAACAAGCGACGC 60.654 57.895 13.03 13.03 0.00 5.19
3293 6541 1.817941 ACAACCAACAAGCGACGCT 60.818 52.632 18.46 18.46 42.56 5.07
3294 6542 1.082756 CAACCAACAAGCGACGCTC 60.083 57.895 24.69 0.00 38.25 5.03
3295 6543 1.522806 AACCAACAAGCGACGCTCA 60.523 52.632 24.69 0.00 38.25 4.26
3296 6544 1.092921 AACCAACAAGCGACGCTCAA 61.093 50.000 24.69 0.00 38.25 3.02
3297 6545 1.092921 ACCAACAAGCGACGCTCAAA 61.093 50.000 24.69 0.00 38.25 2.69
3298 6546 0.238289 CCAACAAGCGACGCTCAAAT 59.762 50.000 24.69 4.00 38.25 2.32
3299 6547 1.334960 CCAACAAGCGACGCTCAAATT 60.335 47.619 24.69 11.98 38.25 1.82
3300 6548 2.384382 CAACAAGCGACGCTCAAATTT 58.616 42.857 24.69 8.99 38.25 1.82
3301 6549 2.774439 ACAAGCGACGCTCAAATTTT 57.226 40.000 24.69 1.80 38.25 1.82
3302 6550 3.078594 ACAAGCGACGCTCAAATTTTT 57.921 38.095 24.69 0.93 38.25 1.94
3324 6572 6.606234 TTTTTGAACATTAGTACAGACGCA 57.394 33.333 0.00 0.00 0.00 5.24
3325 6573 6.606234 TTTTGAACATTAGTACAGACGCAA 57.394 33.333 0.00 0.00 0.00 4.85
3327 6575 3.678072 TGAACATTAGTACAGACGCAAGC 59.322 43.478 0.00 0.00 45.62 4.01
3328 6576 2.259618 ACATTAGTACAGACGCAAGCG 58.740 47.619 13.50 13.50 46.03 4.68
3329 6577 1.005975 CATTAGTACAGACGCAAGCGC 60.006 52.381 15.09 0.00 44.19 5.92
3330 6578 0.242825 TTAGTACAGACGCAAGCGCT 59.757 50.000 15.09 2.64 44.19 5.92
3331 6579 0.179171 TAGTACAGACGCAAGCGCTC 60.179 55.000 12.06 11.06 44.19 5.03
3332 6580 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
3333 6581 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
3334 6582 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
3335 6583 1.078759 ACAGACGCAAGCGCTCATAC 61.079 55.000 12.06 1.58 44.19 2.39
3336 6584 1.874019 AGACGCAAGCGCTCATACG 60.874 57.895 12.06 14.97 44.19 3.06
3337 6585 2.126071 ACGCAAGCGCTCATACGT 60.126 55.556 12.06 15.68 44.19 3.57
3338 6586 0.864377 GACGCAAGCGCTCATACGTA 60.864 55.000 21.50 0.00 44.19 3.57
3339 6587 1.138047 ACGCAAGCGCTCATACGTAC 61.138 55.000 20.54 0.00 44.19 3.67
3340 6588 1.553654 GCAAGCGCTCATACGTACG 59.446 57.895 12.06 15.01 34.88 3.67
3344 6592 2.649662 CGCTCATACGTACGCGCA 60.650 61.111 16.72 0.58 42.83 6.09
3345 6593 2.009226 CGCTCATACGTACGCGCAT 61.009 57.895 16.72 3.32 42.83 4.73
3346 6594 0.723459 CGCTCATACGTACGCGCATA 60.723 55.000 16.72 0.00 42.83 3.14
3347 6595 0.701303 GCTCATACGTACGCGCATAC 59.299 55.000 16.72 5.70 42.83 2.39
3348 6596 1.922880 GCTCATACGTACGCGCATACA 60.923 52.381 16.72 0.00 42.83 2.29
3349 6597 1.707117 CTCATACGTACGCGCATACAC 59.293 52.381 16.72 1.10 42.83 2.90
3350 6598 1.331447 TCATACGTACGCGCATACACT 59.669 47.619 16.72 0.20 42.83 3.55
3351 6599 1.707117 CATACGTACGCGCATACACTC 59.293 52.381 16.72 0.00 42.83 3.51
3352 6600 0.726256 TACGTACGCGCATACACTCA 59.274 50.000 16.72 0.00 42.83 3.41
3353 6601 0.099968 ACGTACGCGCATACACTCAT 59.900 50.000 16.72 0.00 42.83 2.90
3354 6602 0.770590 CGTACGCGCATACACTCATC 59.229 55.000 14.60 0.00 0.00 2.92
3355 6603 1.129326 GTACGCGCATACACTCATCC 58.871 55.000 9.05 0.00 0.00 3.51
3356 6604 0.031585 TACGCGCATACACTCATCCC 59.968 55.000 5.73 0.00 0.00 3.85
3357 6605 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
3358 6606 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
3359 6607 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
3360 6608 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
3361 6609 2.932622 GCGCATACACTCATCCCTATGG 60.933 54.545 0.30 0.00 33.61 2.74
3363 6611 3.615110 CGCATACACTCATCCCTATGGAC 60.615 52.174 0.00 0.00 45.58 4.02
3364 6612 3.615110 GCATACACTCATCCCTATGGACG 60.615 52.174 0.00 0.00 45.58 4.79
3365 6613 0.753262 ACACTCATCCCTATGGACGC 59.247 55.000 0.00 0.00 45.58 5.19
3366 6614 0.319040 CACTCATCCCTATGGACGCG 60.319 60.000 3.53 3.53 45.58 6.01
3367 6615 1.373497 CTCATCCCTATGGACGCGC 60.373 63.158 5.73 0.00 45.58 6.86
3368 6616 2.734723 CATCCCTATGGACGCGCG 60.735 66.667 30.96 30.96 45.58 6.86
3369 6617 4.664677 ATCCCTATGGACGCGCGC 62.665 66.667 32.58 23.91 45.58 6.86
3373 6621 3.913573 CTATGGACGCGCGCACAC 61.914 66.667 32.58 19.81 0.00 3.82
3374 6622 4.726351 TATGGACGCGCGCACACA 62.726 61.111 32.58 24.83 0.00 3.72
3378 6626 4.776953 GACGCGCGCACACACATC 62.777 66.667 32.58 13.80 0.00 3.06
3381 6629 2.813474 GCGCGCACACACATCCTA 60.813 61.111 29.10 0.00 0.00 2.94
3382 6630 2.173669 GCGCGCACACACATCCTAT 61.174 57.895 29.10 0.00 0.00 2.57
3383 6631 1.927210 CGCGCACACACATCCTATC 59.073 57.895 8.75 0.00 0.00 2.08
3384 6632 1.490693 CGCGCACACACATCCTATCC 61.491 60.000 8.75 0.00 0.00 2.59
3385 6633 1.160329 GCGCACACACATCCTATCCC 61.160 60.000 0.30 0.00 0.00 3.85
3386 6634 0.465705 CGCACACACATCCTATCCCT 59.534 55.000 0.00 0.00 0.00 4.20
3387 6635 1.686587 CGCACACACATCCTATCCCTA 59.313 52.381 0.00 0.00 0.00 3.53
3388 6636 2.300152 CGCACACACATCCTATCCCTAT 59.700 50.000 0.00 0.00 0.00 2.57
3389 6637 3.668447 GCACACACATCCTATCCCTATG 58.332 50.000 0.00 0.00 0.00 2.23
3390 6638 3.324846 GCACACACATCCTATCCCTATGA 59.675 47.826 0.00 0.00 0.00 2.15
3391 6639 4.562347 GCACACACATCCTATCCCTATGAG 60.562 50.000 0.00 0.00 0.00 2.90
3392 6640 4.020751 CACACACATCCTATCCCTATGAGG 60.021 50.000 0.00 0.00 34.30 3.86
3408 6656 2.480642 GAGGGTCCCTCTAACCATCT 57.519 55.000 28.40 0.00 46.41 2.90
3409 6657 3.614568 GAGGGTCCCTCTAACCATCTA 57.385 52.381 28.40 0.00 46.41 1.98
3410 6658 3.924922 GAGGGTCCCTCTAACCATCTAA 58.075 50.000 28.40 0.00 46.41 2.10
3411 6659 3.898741 GAGGGTCCCTCTAACCATCTAAG 59.101 52.174 28.40 0.00 46.41 2.18
3412 6660 3.275228 AGGGTCCCTCTAACCATCTAAGT 59.725 47.826 3.85 0.00 38.62 2.24
3413 6661 4.485021 AGGGTCCCTCTAACCATCTAAGTA 59.515 45.833 3.85 0.00 38.62 2.24
3414 6662 5.138123 AGGGTCCCTCTAACCATCTAAGTAT 59.862 44.000 3.85 0.00 38.62 2.12
3415 6663 5.845065 GGGTCCCTCTAACCATCTAAGTATT 59.155 44.000 0.00 0.00 38.62 1.89
3416 6664 6.014413 GGGTCCCTCTAACCATCTAAGTATTC 60.014 46.154 0.00 0.00 38.62 1.75
3417 6665 6.553852 GGTCCCTCTAACCATCTAAGTATTCA 59.446 42.308 0.00 0.00 36.75 2.57
3418 6666 7.070821 GGTCCCTCTAACCATCTAAGTATTCAA 59.929 40.741 0.00 0.00 36.75 2.69
3419 6667 7.927092 GTCCCTCTAACCATCTAAGTATTCAAC 59.073 40.741 0.00 0.00 0.00 3.18
3420 6668 7.844779 TCCCTCTAACCATCTAAGTATTCAACT 59.155 37.037 0.00 0.00 41.49 3.16
3421 6669 9.144298 CCCTCTAACCATCTAAGTATTCAACTA 57.856 37.037 0.00 0.00 37.50 2.24
3422 6670 9.968870 CCTCTAACCATCTAAGTATTCAACTAC 57.031 37.037 0.00 0.00 37.50 2.73
3423 6671 9.968870 CTCTAACCATCTAAGTATTCAACTACC 57.031 37.037 0.00 0.00 37.50 3.18
3424 6672 9.710818 TCTAACCATCTAAGTATTCAACTACCT 57.289 33.333 0.00 0.00 37.50 3.08
3427 6675 8.375493 ACCATCTAAGTATTCAACTACCTTCA 57.625 34.615 0.00 0.00 37.50 3.02
3428 6676 8.822805 ACCATCTAAGTATTCAACTACCTTCAA 58.177 33.333 0.00 0.00 37.50 2.69
3429 6677 9.667107 CCATCTAAGTATTCAACTACCTTCAAA 57.333 33.333 0.00 0.00 37.50 2.69
3451 6699 4.853924 AAAAACTACAGGCTGGTTCATG 57.146 40.909 20.34 4.48 0.00 3.07
3452 6700 3.788227 AAACTACAGGCTGGTTCATGA 57.212 42.857 20.34 0.00 0.00 3.07
3453 6701 4.307032 AAACTACAGGCTGGTTCATGAT 57.693 40.909 20.34 0.00 0.00 2.45
3454 6702 3.272574 ACTACAGGCTGGTTCATGATG 57.727 47.619 20.34 0.00 0.00 3.07
3455 6703 2.840038 ACTACAGGCTGGTTCATGATGA 59.160 45.455 20.34 0.00 0.00 2.92
3456 6704 2.119801 ACAGGCTGGTTCATGATGAC 57.880 50.000 20.34 0.00 0.00 3.06
3457 6705 1.012086 CAGGCTGGTTCATGATGACG 58.988 55.000 6.61 0.00 0.00 4.35
3458 6706 0.745845 AGGCTGGTTCATGATGACGC 60.746 55.000 0.00 0.00 0.00 5.19
3459 6707 0.745845 GGCTGGTTCATGATGACGCT 60.746 55.000 0.00 0.00 0.00 5.07
3460 6708 0.654683 GCTGGTTCATGATGACGCTC 59.345 55.000 0.00 0.00 0.00 5.03
3461 6709 2.008543 GCTGGTTCATGATGACGCTCA 61.009 52.381 0.00 0.00 0.00 4.26
3462 6710 2.349590 CTGGTTCATGATGACGCTCAA 58.650 47.619 0.00 0.00 0.00 3.02
3463 6711 2.941064 CTGGTTCATGATGACGCTCAAT 59.059 45.455 0.00 0.00 0.00 2.57
3464 6712 3.346315 TGGTTCATGATGACGCTCAATT 58.654 40.909 0.00 0.00 0.00 2.32
3465 6713 3.758023 TGGTTCATGATGACGCTCAATTT 59.242 39.130 0.00 0.00 0.00 1.82
3466 6714 4.218200 TGGTTCATGATGACGCTCAATTTT 59.782 37.500 0.00 0.00 0.00 1.82
3467 6715 4.795278 GGTTCATGATGACGCTCAATTTTC 59.205 41.667 0.00 0.00 0.00 2.29
3468 6716 5.393124 GTTCATGATGACGCTCAATTTTCA 58.607 37.500 0.00 0.00 0.00 2.69
3469 6717 5.625921 TCATGATGACGCTCAATTTTCAA 57.374 34.783 0.00 0.00 0.00 2.69
3470 6718 6.198650 TCATGATGACGCTCAATTTTCAAT 57.801 33.333 0.00 0.00 0.00 2.57
3471 6719 6.623486 TCATGATGACGCTCAATTTTCAATT 58.377 32.000 0.00 0.00 0.00 2.32
3472 6720 6.528774 TCATGATGACGCTCAATTTTCAATTG 59.471 34.615 0.00 0.00 0.00 2.32
3473 6721 6.011476 TGATGACGCTCAATTTTCAATTGA 57.989 33.333 3.38 3.38 36.67 2.57
3474 6722 6.445475 TGATGACGCTCAATTTTCAATTGAA 58.555 32.000 16.91 16.91 37.55 2.69
3475 6723 7.092079 TGATGACGCTCAATTTTCAATTGAAT 58.908 30.769 21.10 5.09 37.55 2.57
3476 6724 8.242739 TGATGACGCTCAATTTTCAATTGAATA 58.757 29.630 21.10 16.72 37.55 1.75
3477 6725 9.241317 GATGACGCTCAATTTTCAATTGAATAT 57.759 29.630 21.10 18.17 37.55 1.28
3490 6738 8.877864 TTCAATTGAATATAAACCCTCACAGT 57.122 30.769 16.91 0.00 0.00 3.55
3491 6739 8.877864 TCAATTGAATATAAACCCTCACAGTT 57.122 30.769 5.45 0.00 0.00 3.16
3492 6740 9.308000 TCAATTGAATATAAACCCTCACAGTTT 57.692 29.630 5.45 0.00 40.43 2.66
3493 6741 9.573133 CAATTGAATATAAACCCTCACAGTTTC 57.427 33.333 0.00 0.00 38.37 2.78
3494 6742 8.877864 ATTGAATATAAACCCTCACAGTTTCA 57.122 30.769 0.00 0.00 38.37 2.69
3495 6743 7.921786 TGAATATAAACCCTCACAGTTTCAG 57.078 36.000 0.00 0.00 38.37 3.02
3496 6744 7.685481 TGAATATAAACCCTCACAGTTTCAGA 58.315 34.615 0.00 0.00 38.37 3.27
3497 6745 8.160765 TGAATATAAACCCTCACAGTTTCAGAA 58.839 33.333 0.00 0.00 38.37 3.02
3498 6746 8.567285 AATATAAACCCTCACAGTTTCAGAAG 57.433 34.615 0.00 0.00 38.37 2.85
3499 6747 3.933861 AACCCTCACAGTTTCAGAAGT 57.066 42.857 0.00 0.00 0.00 3.01
3500 6748 3.933861 ACCCTCACAGTTTCAGAAGTT 57.066 42.857 0.00 0.00 0.00 2.66
3501 6749 4.236527 ACCCTCACAGTTTCAGAAGTTT 57.763 40.909 0.00 0.00 0.00 2.66
3502 6750 4.200092 ACCCTCACAGTTTCAGAAGTTTC 58.800 43.478 0.00 0.00 0.00 2.78
3503 6751 4.080299 ACCCTCACAGTTTCAGAAGTTTCT 60.080 41.667 0.00 0.00 38.25 2.52
3504 6752 4.884164 CCCTCACAGTTTCAGAAGTTTCTT 59.116 41.667 0.00 0.00 34.74 2.52
3505 6753 5.220931 CCCTCACAGTTTCAGAAGTTTCTTG 60.221 44.000 0.00 0.00 34.74 3.02
3506 6754 5.586243 CCTCACAGTTTCAGAAGTTTCTTGA 59.414 40.000 0.00 0.00 34.74 3.02
3507 6755 6.261826 CCTCACAGTTTCAGAAGTTTCTTGAT 59.738 38.462 0.00 0.00 34.74 2.57
3508 6756 7.251704 TCACAGTTTCAGAAGTTTCTTGATC 57.748 36.000 0.00 0.00 34.74 2.92
3509 6757 7.050377 TCACAGTTTCAGAAGTTTCTTGATCT 58.950 34.615 0.00 0.00 34.74 2.75
3510 6758 8.204160 TCACAGTTTCAGAAGTTTCTTGATCTA 58.796 33.333 0.00 0.00 34.74 1.98
3511 6759 8.279103 CACAGTTTCAGAAGTTTCTTGATCTAC 58.721 37.037 0.00 0.00 34.74 2.59
3512 6760 7.987458 ACAGTTTCAGAAGTTTCTTGATCTACA 59.013 33.333 0.00 0.00 34.74 2.74
3513 6761 8.494347 CAGTTTCAGAAGTTTCTTGATCTACAG 58.506 37.037 0.00 0.00 34.74 2.74
3514 6762 8.207545 AGTTTCAGAAGTTTCTTGATCTACAGT 58.792 33.333 0.00 0.00 34.74 3.55
3515 6763 9.477484 GTTTCAGAAGTTTCTTGATCTACAGTA 57.523 33.333 0.00 0.00 34.74 2.74
3524 6772 8.983724 GTTTCTTGATCTACAGTATAAGATGGC 58.016 37.037 0.00 0.00 32.60 4.40
3525 6773 7.233389 TCTTGATCTACAGTATAAGATGGCC 57.767 40.000 0.00 0.00 32.60 5.36
3526 6774 6.782494 TCTTGATCTACAGTATAAGATGGCCA 59.218 38.462 8.56 8.56 32.60 5.36
3527 6775 7.455953 TCTTGATCTACAGTATAAGATGGCCAT 59.544 37.037 20.96 20.96 32.60 4.40
3528 6776 8.664669 TTGATCTACAGTATAAGATGGCCATA 57.335 34.615 20.84 3.01 32.60 2.74
3529 6777 8.844865 TGATCTACAGTATAAGATGGCCATAT 57.155 34.615 20.84 14.09 32.60 1.78
3530 6778 8.699130 TGATCTACAGTATAAGATGGCCATATG 58.301 37.037 20.84 11.10 32.60 1.78
3531 6779 6.878317 TCTACAGTATAAGATGGCCATATGC 58.122 40.000 20.84 12.55 40.16 3.14
3532 6780 4.507710 ACAGTATAAGATGGCCATATGCG 58.492 43.478 20.84 10.90 42.61 4.73
3533 6781 4.222810 ACAGTATAAGATGGCCATATGCGA 59.777 41.667 20.84 5.19 42.61 5.10
3534 6782 5.178061 CAGTATAAGATGGCCATATGCGAA 58.822 41.667 20.84 2.66 42.61 4.70
3535 6783 5.292834 CAGTATAAGATGGCCATATGCGAAG 59.707 44.000 20.84 4.76 42.61 3.79
3550 6798 2.957576 CGAAGCAGTCCAAAGAGTTG 57.042 50.000 0.00 0.00 34.25 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
516 520 0.830648 CCGCTCCCTCTATTCCACAA 59.169 55.000 0.00 0.00 0.00 3.33
626 646 4.133013 ACGTATTATTGAGTGGTGGACC 57.867 45.455 0.00 0.00 0.00 4.46
628 648 8.795842 ATAAAAACGTATTATTGAGTGGTGGA 57.204 30.769 0.00 0.00 0.00 4.02
661 688 6.490040 GTGCTGGGATAAGGCTTCAATAAATA 59.510 38.462 1.30 0.00 0.00 1.40
2074 5250 4.053983 CCAGGACTGAATATCGTGTGATG 58.946 47.826 0.00 0.00 35.99 3.07
2885 6133 4.704833 TCGTTCCAGCAGCCCAGC 62.705 66.667 0.00 0.00 0.00 4.85
2886 6134 2.743928 GTCGTTCCAGCAGCCCAG 60.744 66.667 0.00 0.00 0.00 4.45
2887 6135 4.680237 CGTCGTTCCAGCAGCCCA 62.680 66.667 0.00 0.00 0.00 5.36
2888 6136 3.665675 ATCGTCGTTCCAGCAGCCC 62.666 63.158 0.00 0.00 0.00 5.19
2889 6137 1.696832 GAATCGTCGTTCCAGCAGCC 61.697 60.000 0.00 0.00 0.00 4.85
2890 6138 1.696832 GGAATCGTCGTTCCAGCAGC 61.697 60.000 16.73 0.00 45.63 5.25
2891 6139 1.413767 CGGAATCGTCGTTCCAGCAG 61.414 60.000 19.65 6.28 46.47 4.24
2892 6140 1.445410 CGGAATCGTCGTTCCAGCA 60.445 57.895 19.65 0.00 46.47 4.41
2893 6141 2.165301 CCGGAATCGTCGTTCCAGC 61.165 63.158 19.65 0.00 46.47 4.85
2894 6142 2.165301 GCCGGAATCGTCGTTCCAG 61.165 63.158 5.05 13.06 46.47 3.86
2895 6143 2.125832 GCCGGAATCGTCGTTCCA 60.126 61.111 5.05 0.00 46.47 3.53
2896 6144 3.252484 CGCCGGAATCGTCGTTCC 61.252 66.667 5.05 13.43 43.42 3.62
2897 6145 2.202518 TCGCCGGAATCGTCGTTC 60.203 61.111 5.05 0.00 38.92 3.95
2898 6146 2.505557 GTCGCCGGAATCGTCGTT 60.506 61.111 5.05 0.00 38.92 3.85
2899 6147 4.824166 CGTCGCCGGAATCGTCGT 62.824 66.667 5.05 0.00 38.92 4.34
2900 6148 4.525576 TCGTCGCCGGAATCGTCG 62.526 66.667 5.05 9.61 39.22 5.12
2901 6149 1.143969 AATTCGTCGCCGGAATCGTC 61.144 55.000 5.05 0.00 33.95 4.20
2902 6150 1.143969 GAATTCGTCGCCGGAATCGT 61.144 55.000 5.05 0.00 33.95 3.73
2903 6151 1.558383 GAATTCGTCGCCGGAATCG 59.442 57.895 5.05 5.88 33.95 3.34
2904 6152 1.558383 CGAATTCGTCGCCGGAATC 59.442 57.895 19.67 0.00 44.14 2.52
2905 6153 3.700961 CGAATTCGTCGCCGGAAT 58.299 55.556 19.67 0.00 44.14 3.01
2913 6161 4.204891 CCGCACGCCGAATTCGTC 62.205 66.667 25.10 13.14 38.19 4.20
2931 6179 3.047877 GAACCCAAGTCCCGCACG 61.048 66.667 0.00 0.00 0.00 5.34
2932 6180 2.671963 GGAACCCAAGTCCCGCAC 60.672 66.667 0.00 0.00 0.00 5.34
2945 6193 0.883370 AAGCGTGTCGAAAGGGGAAC 60.883 55.000 0.00 0.00 0.00 3.62
2946 6194 0.179040 AAAGCGTGTCGAAAGGGGAA 60.179 50.000 0.00 0.00 0.00 3.97
2947 6195 0.179040 AAAAGCGTGTCGAAAGGGGA 60.179 50.000 0.00 0.00 0.00 4.81
2948 6196 0.237498 GAAAAGCGTGTCGAAAGGGG 59.763 55.000 0.00 0.00 0.00 4.79
2949 6197 1.194772 GAGAAAAGCGTGTCGAAAGGG 59.805 52.381 0.00 0.00 0.00 3.95
2950 6198 1.194772 GGAGAAAAGCGTGTCGAAAGG 59.805 52.381 0.00 0.00 0.00 3.11
2951 6199 2.135933 AGGAGAAAAGCGTGTCGAAAG 58.864 47.619 0.00 0.00 0.00 2.62
2952 6200 2.132762 GAGGAGAAAAGCGTGTCGAAA 58.867 47.619 0.00 0.00 0.00 3.46
2953 6201 1.340248 AGAGGAGAAAAGCGTGTCGAA 59.660 47.619 0.00 0.00 0.00 3.71
2954 6202 0.959553 AGAGGAGAAAAGCGTGTCGA 59.040 50.000 0.00 0.00 0.00 4.20
2955 6203 1.068194 AGAGAGGAGAAAAGCGTGTCG 60.068 52.381 0.00 0.00 0.00 4.35
2956 6204 2.333014 CAGAGAGGAGAAAAGCGTGTC 58.667 52.381 0.00 0.00 0.00 3.67
2957 6205 1.001406 CCAGAGAGGAGAAAAGCGTGT 59.999 52.381 0.00 0.00 41.22 4.49
2958 6206 1.674221 CCCAGAGAGGAGAAAAGCGTG 60.674 57.143 0.00 0.00 41.22 5.34
2959 6207 0.610687 CCCAGAGAGGAGAAAAGCGT 59.389 55.000 0.00 0.00 41.22 5.07
2960 6208 0.107945 CCCCAGAGAGGAGAAAAGCG 60.108 60.000 0.00 0.00 41.22 4.68
2961 6209 0.254462 CCCCCAGAGAGGAGAAAAGC 59.746 60.000 0.00 0.00 41.22 3.51
2977 6225 1.796017 TCCAAAGTTTCCAAACCCCC 58.204 50.000 0.00 0.00 39.71 5.40
2978 6226 2.549992 GCATCCAAAGTTTCCAAACCCC 60.550 50.000 0.00 0.00 39.71 4.95
2979 6227 2.766313 GCATCCAAAGTTTCCAAACCC 58.234 47.619 0.00 0.00 39.71 4.11
2980 6228 2.403259 CGCATCCAAAGTTTCCAAACC 58.597 47.619 0.00 0.00 39.71 3.27
2981 6229 2.403259 CCGCATCCAAAGTTTCCAAAC 58.597 47.619 0.00 0.00 39.17 2.93
2982 6230 1.342819 CCCGCATCCAAAGTTTCCAAA 59.657 47.619 0.00 0.00 0.00 3.28
2983 6231 0.965439 CCCGCATCCAAAGTTTCCAA 59.035 50.000 0.00 0.00 0.00 3.53
2984 6232 0.178975 ACCCGCATCCAAAGTTTCCA 60.179 50.000 0.00 0.00 0.00 3.53
2985 6233 0.243636 CACCCGCATCCAAAGTTTCC 59.756 55.000 0.00 0.00 0.00 3.13
2986 6234 0.388520 GCACCCGCATCCAAAGTTTC 60.389 55.000 0.00 0.00 38.36 2.78
2987 6235 1.665442 GCACCCGCATCCAAAGTTT 59.335 52.632 0.00 0.00 38.36 2.66
2988 6236 2.625823 CGCACCCGCATCCAAAGTT 61.626 57.895 0.00 0.00 38.40 2.66
2989 6237 3.055719 CGCACCCGCATCCAAAGT 61.056 61.111 0.00 0.00 38.40 2.66
2990 6238 3.814268 CCGCACCCGCATCCAAAG 61.814 66.667 0.00 0.00 38.40 2.77
3001 6249 4.501714 TCGTATCCGTGCCGCACC 62.502 66.667 17.81 2.40 35.01 5.01
3002 6250 2.327002 TACTCGTATCCGTGCCGCAC 62.327 60.000 13.81 13.81 35.01 5.34
3003 6251 2.114051 TACTCGTATCCGTGCCGCA 61.114 57.895 0.00 0.00 35.01 5.69
3004 6252 1.656569 GTACTCGTATCCGTGCCGC 60.657 63.158 0.00 0.00 35.01 6.53
3005 6253 1.368493 CGTACTCGTATCCGTGCCG 60.368 63.158 0.00 0.00 35.01 5.69
3006 6254 0.041488 CTCGTACTCGTATCCGTGCC 60.041 60.000 0.00 0.00 38.33 5.01
3007 6255 0.654683 ACTCGTACTCGTATCCGTGC 59.345 55.000 0.00 0.00 38.33 5.34
3008 6256 1.662629 ACACTCGTACTCGTATCCGTG 59.337 52.381 0.00 0.00 38.33 4.94
3009 6257 1.662629 CACACTCGTACTCGTATCCGT 59.337 52.381 0.00 0.00 38.33 4.69
3010 6258 1.594034 GCACACTCGTACTCGTATCCG 60.594 57.143 0.00 0.00 38.33 4.18
3011 6259 1.594034 CGCACACTCGTACTCGTATCC 60.594 57.143 0.00 0.00 38.33 2.59
3012 6260 1.061711 ACGCACACTCGTACTCGTATC 59.938 52.381 0.00 0.00 41.36 2.24
3013 6261 1.081892 ACGCACACTCGTACTCGTAT 58.918 50.000 0.00 0.00 41.36 3.06
3014 6262 0.164432 CACGCACACTCGTACTCGTA 59.836 55.000 0.00 0.00 41.21 3.43
3015 6263 1.082300 CACGCACACTCGTACTCGT 60.082 57.895 0.00 0.00 41.21 4.18
3016 6264 1.796355 CCACGCACACTCGTACTCG 60.796 63.158 0.00 0.00 41.21 4.18
3017 6265 1.443872 CCCACGCACACTCGTACTC 60.444 63.158 0.00 0.00 41.21 2.59
3018 6266 2.649034 CCCACGCACACTCGTACT 59.351 61.111 0.00 0.00 41.21 2.73
3019 6267 3.110178 GCCCACGCACACTCGTAC 61.110 66.667 0.00 0.00 41.21 3.67
3020 6268 3.607661 TGCCCACGCACACTCGTA 61.608 61.111 0.00 0.00 41.12 3.43
3057 6305 2.433664 GTAGTCCGGGTTGGCACG 60.434 66.667 0.00 0.00 42.03 5.34
3058 6306 2.433664 CGTAGTCCGGGTTGGCAC 60.434 66.667 0.00 0.00 37.80 5.01
3059 6307 2.918802 ACGTAGTCCGGGTTGGCA 60.919 61.111 0.00 0.00 29.74 4.92
3060 6308 2.433664 CACGTAGTCCGGGTTGGC 60.434 66.667 0.00 0.00 41.61 4.52
3061 6309 2.263540 CCACGTAGTCCGGGTTGG 59.736 66.667 0.00 0.00 41.61 3.77
3062 6310 2.433664 GCCACGTAGTCCGGGTTG 60.434 66.667 0.00 0.00 41.61 3.77
3063 6311 2.918802 TGCCACGTAGTCCGGGTT 60.919 61.111 0.00 0.00 41.61 4.11
3064 6312 3.688159 GTGCCACGTAGTCCGGGT 61.688 66.667 0.00 0.00 41.61 5.28
3065 6313 3.379445 AGTGCCACGTAGTCCGGG 61.379 66.667 0.00 0.00 41.61 5.73
3066 6314 2.126071 CAGTGCCACGTAGTCCGG 60.126 66.667 0.00 0.00 41.61 5.14
3067 6315 0.319211 TTTCAGTGCCACGTAGTCCG 60.319 55.000 0.00 0.00 41.61 4.79
3068 6316 2.094762 ATTTCAGTGCCACGTAGTCC 57.905 50.000 0.00 0.00 41.61 3.85
3069 6317 5.600908 TTTTATTTCAGTGCCACGTAGTC 57.399 39.130 0.00 0.00 41.61 2.59
3093 6341 6.278363 TCTAGAAGCAGTAAAACACTTCGTT 58.722 36.000 0.00 0.00 42.61 3.85
3094 6342 5.839621 TCTAGAAGCAGTAAAACACTTCGT 58.160 37.500 0.00 0.00 42.61 3.85
3095 6343 6.150318 TCTCTAGAAGCAGTAAAACACTTCG 58.850 40.000 0.00 0.00 42.61 3.79
3096 6344 7.948278 TTCTCTAGAAGCAGTAAAACACTTC 57.052 36.000 0.00 0.00 39.03 3.01
3097 6345 8.732746 TTTTCTCTAGAAGCAGTAAAACACTT 57.267 30.769 0.00 0.00 33.21 3.16
3098 6346 8.204836 TCTTTTCTCTAGAAGCAGTAAAACACT 58.795 33.333 0.00 0.00 34.83 3.55
3099 6347 8.366671 TCTTTTCTCTAGAAGCAGTAAAACAC 57.633 34.615 0.00 0.00 35.21 3.32
3100 6348 8.958119 TTCTTTTCTCTAGAAGCAGTAAAACA 57.042 30.769 0.00 0.00 35.21 2.83
3104 6352 9.391006 TGTTTTTCTTTTCTCTAGAAGCAGTAA 57.609 29.630 0.00 0.00 35.21 2.24
3105 6353 8.958119 TGTTTTTCTTTTCTCTAGAAGCAGTA 57.042 30.769 0.00 0.00 35.21 2.74
3106 6354 7.554476 ACTGTTTTTCTTTTCTCTAGAAGCAGT 59.446 33.333 0.00 0.00 36.83 4.40
3107 6355 7.924940 ACTGTTTTTCTTTTCTCTAGAAGCAG 58.075 34.615 0.00 0.00 35.83 4.24
3108 6356 7.552687 TGACTGTTTTTCTTTTCTCTAGAAGCA 59.447 33.333 0.00 0.00 35.21 3.91
3109 6357 7.853437 GTGACTGTTTTTCTTTTCTCTAGAAGC 59.147 37.037 0.00 0.00 35.21 3.86
3110 6358 8.338986 GGTGACTGTTTTTCTTTTCTCTAGAAG 58.661 37.037 0.00 0.00 35.21 2.85
3111 6359 7.282450 GGGTGACTGTTTTTCTTTTCTCTAGAA 59.718 37.037 0.00 0.00 0.00 2.10
3112 6360 6.766467 GGGTGACTGTTTTTCTTTTCTCTAGA 59.234 38.462 0.00 0.00 0.00 2.43
3113 6361 6.292919 CGGGTGACTGTTTTTCTTTTCTCTAG 60.293 42.308 0.00 0.00 0.00 2.43
3114 6362 5.526111 CGGGTGACTGTTTTTCTTTTCTCTA 59.474 40.000 0.00 0.00 0.00 2.43
3115 6363 4.335594 CGGGTGACTGTTTTTCTTTTCTCT 59.664 41.667 0.00 0.00 0.00 3.10
3116 6364 4.334481 TCGGGTGACTGTTTTTCTTTTCTC 59.666 41.667 0.00 0.00 38.16 2.87
3117 6365 4.266714 TCGGGTGACTGTTTTTCTTTTCT 58.733 39.130 0.00 0.00 38.16 2.52
3118 6366 4.625972 TCGGGTGACTGTTTTTCTTTTC 57.374 40.909 0.00 0.00 38.16 2.29
3119 6367 5.592104 ATTCGGGTGACTGTTTTTCTTTT 57.408 34.783 0.00 0.00 38.16 2.27
3120 6368 6.715264 AGATATTCGGGTGACTGTTTTTCTTT 59.285 34.615 0.00 0.00 38.16 2.52
3121 6369 6.238648 AGATATTCGGGTGACTGTTTTTCTT 58.761 36.000 0.00 0.00 38.16 2.52
3122 6370 5.805728 AGATATTCGGGTGACTGTTTTTCT 58.194 37.500 0.00 0.00 38.16 2.52
3123 6371 5.220416 CGAGATATTCGGGTGACTGTTTTTC 60.220 44.000 0.00 0.00 45.54 2.29
3124 6372 4.630069 CGAGATATTCGGGTGACTGTTTTT 59.370 41.667 0.00 0.00 45.54 1.94
3125 6373 4.181578 CGAGATATTCGGGTGACTGTTTT 58.818 43.478 0.00 0.00 45.54 2.43
3126 6374 3.782046 CGAGATATTCGGGTGACTGTTT 58.218 45.455 0.00 0.00 45.54 2.83
3127 6375 3.438297 CGAGATATTCGGGTGACTGTT 57.562 47.619 0.00 0.00 45.54 3.16
3138 6386 2.031333 ACCTAACGTCCGCGAGATATTC 60.031 50.000 8.23 0.00 42.00 1.75
3139 6387 1.952296 ACCTAACGTCCGCGAGATATT 59.048 47.619 8.23 4.77 42.00 1.28
3140 6388 1.602311 ACCTAACGTCCGCGAGATAT 58.398 50.000 8.23 0.00 42.00 1.63
3141 6389 1.382522 AACCTAACGTCCGCGAGATA 58.617 50.000 8.23 0.00 42.00 1.98
3142 6390 0.529378 AAACCTAACGTCCGCGAGAT 59.471 50.000 8.23 0.00 42.00 2.75
3143 6391 0.387622 CAAACCTAACGTCCGCGAGA 60.388 55.000 8.23 0.00 42.00 4.04
3144 6392 1.349259 CCAAACCTAACGTCCGCGAG 61.349 60.000 8.23 0.18 42.00 5.03
3145 6393 1.373246 CCAAACCTAACGTCCGCGA 60.373 57.895 8.23 0.00 42.00 5.87
3146 6394 2.385091 CCCAAACCTAACGTCCGCG 61.385 63.158 0.00 0.00 44.93 6.46
3147 6395 1.301953 ACCCAAACCTAACGTCCGC 60.302 57.895 0.00 0.00 0.00 5.54
3148 6396 0.033781 TCACCCAAACCTAACGTCCG 59.966 55.000 0.00 0.00 0.00 4.79
3149 6397 1.071228 AGTCACCCAAACCTAACGTCC 59.929 52.381 0.00 0.00 0.00 4.79
3150 6398 2.538512 AGTCACCCAAACCTAACGTC 57.461 50.000 0.00 0.00 0.00 4.34
3151 6399 2.946990 CAAAGTCACCCAAACCTAACGT 59.053 45.455 0.00 0.00 0.00 3.99
3152 6400 3.207778 TCAAAGTCACCCAAACCTAACG 58.792 45.455 0.00 0.00 0.00 3.18
3153 6401 3.004419 GCTCAAAGTCACCCAAACCTAAC 59.996 47.826 0.00 0.00 0.00 2.34
3154 6402 3.219281 GCTCAAAGTCACCCAAACCTAA 58.781 45.455 0.00 0.00 0.00 2.69
3155 6403 2.173782 TGCTCAAAGTCACCCAAACCTA 59.826 45.455 0.00 0.00 0.00 3.08
3156 6404 1.064017 TGCTCAAAGTCACCCAAACCT 60.064 47.619 0.00 0.00 0.00 3.50
3157 6405 1.338020 CTGCTCAAAGTCACCCAAACC 59.662 52.381 0.00 0.00 0.00 3.27
3158 6406 1.269257 GCTGCTCAAAGTCACCCAAAC 60.269 52.381 0.00 0.00 0.00 2.93
3159 6407 1.032014 GCTGCTCAAAGTCACCCAAA 58.968 50.000 0.00 0.00 0.00 3.28
3160 6408 0.183492 AGCTGCTCAAAGTCACCCAA 59.817 50.000 0.00 0.00 0.00 4.12
3161 6409 1.055849 TAGCTGCTCAAAGTCACCCA 58.944 50.000 4.91 0.00 0.00 4.51
3162 6410 2.185004 TTAGCTGCTCAAAGTCACCC 57.815 50.000 4.91 0.00 0.00 4.61
3163 6411 3.604582 AGATTAGCTGCTCAAAGTCACC 58.395 45.455 4.91 0.00 0.00 4.02
3164 6412 4.248859 TGAGATTAGCTGCTCAAAGTCAC 58.751 43.478 4.91 0.00 38.14 3.67
3165 6413 4.541973 TGAGATTAGCTGCTCAAAGTCA 57.458 40.909 4.91 1.37 38.14 3.41
3170 6418 4.898320 TGTCTTTGAGATTAGCTGCTCAA 58.102 39.130 18.62 18.62 46.20 3.02
3171 6419 4.541973 TGTCTTTGAGATTAGCTGCTCA 57.458 40.909 4.91 10.54 39.24 4.26
3172 6420 5.869753 TTTGTCTTTGAGATTAGCTGCTC 57.130 39.130 4.91 0.95 0.00 4.26
3173 6421 6.639632 TTTTTGTCTTTGAGATTAGCTGCT 57.360 33.333 7.57 7.57 0.00 4.24
3174 6422 6.865205 ACATTTTTGTCTTTGAGATTAGCTGC 59.135 34.615 0.00 0.00 0.00 5.25
3175 6423 7.327761 CCACATTTTTGTCTTTGAGATTAGCTG 59.672 37.037 0.00 0.00 0.00 4.24
3176 6424 7.231317 TCCACATTTTTGTCTTTGAGATTAGCT 59.769 33.333 0.00 0.00 0.00 3.32
3177 6425 7.370383 TCCACATTTTTGTCTTTGAGATTAGC 58.630 34.615 0.00 0.00 0.00 3.09
3178 6426 9.918630 AATCCACATTTTTGTCTTTGAGATTAG 57.081 29.630 0.00 0.00 0.00 1.73
3180 6428 9.617523 AAAATCCACATTTTTGTCTTTGAGATT 57.382 25.926 0.00 0.00 38.83 2.40
3198 6446 9.574458 GGCTTCTTTCTAAGAAATAAAATCCAC 57.426 33.333 0.00 0.00 46.13 4.02
3199 6447 8.458843 CGGCTTCTTTCTAAGAAATAAAATCCA 58.541 33.333 0.00 0.00 46.13 3.41
3200 6448 8.674607 TCGGCTTCTTTCTAAGAAATAAAATCC 58.325 33.333 0.00 0.75 46.13 3.01
3202 6450 9.841880 GTTCGGCTTCTTTCTAAGAAATAAAAT 57.158 29.630 0.00 0.00 46.13 1.82
3203 6451 9.063615 AGTTCGGCTTCTTTCTAAGAAATAAAA 57.936 29.630 0.00 0.00 46.13 1.52
3204 6452 8.617290 AGTTCGGCTTCTTTCTAAGAAATAAA 57.383 30.769 0.00 0.00 46.13 1.40
3205 6453 9.148104 GTAGTTCGGCTTCTTTCTAAGAAATAA 57.852 33.333 0.00 0.00 46.13 1.40
3206 6454 8.308931 TGTAGTTCGGCTTCTTTCTAAGAAATA 58.691 33.333 0.00 0.00 46.13 1.40
3207 6455 7.159372 TGTAGTTCGGCTTCTTTCTAAGAAAT 58.841 34.615 0.00 0.00 46.13 2.17
3208 6456 6.518493 TGTAGTTCGGCTTCTTTCTAAGAAA 58.482 36.000 0.00 0.00 46.13 2.52
3209 6457 6.092955 TGTAGTTCGGCTTCTTTCTAAGAA 57.907 37.500 2.27 2.27 44.82 2.52
3210 6458 5.243283 ACTGTAGTTCGGCTTCTTTCTAAGA 59.757 40.000 0.00 0.00 35.26 2.10
3211 6459 5.471257 ACTGTAGTTCGGCTTCTTTCTAAG 58.529 41.667 0.00 0.00 0.00 2.18
3212 6460 5.464030 ACTGTAGTTCGGCTTCTTTCTAA 57.536 39.130 0.00 0.00 0.00 2.10
3213 6461 6.561614 CATACTGTAGTTCGGCTTCTTTCTA 58.438 40.000 0.00 0.00 0.00 2.10
3214 6462 5.411781 CATACTGTAGTTCGGCTTCTTTCT 58.588 41.667 0.00 0.00 0.00 2.52
3215 6463 4.033014 GCATACTGTAGTTCGGCTTCTTTC 59.967 45.833 0.00 0.00 0.00 2.62
3216 6464 3.933332 GCATACTGTAGTTCGGCTTCTTT 59.067 43.478 0.00 0.00 0.00 2.52
3217 6465 3.195825 AGCATACTGTAGTTCGGCTTCTT 59.804 43.478 0.00 0.00 0.00 2.52
3218 6466 2.761208 AGCATACTGTAGTTCGGCTTCT 59.239 45.455 0.00 0.00 0.00 2.85
3219 6467 3.166489 AGCATACTGTAGTTCGGCTTC 57.834 47.619 0.00 0.00 0.00 3.86
3220 6468 4.730949 TTAGCATACTGTAGTTCGGCTT 57.269 40.909 9.10 0.00 32.50 4.35
3221 6469 4.939052 ATTAGCATACTGTAGTTCGGCT 57.061 40.909 8.89 8.89 33.93 5.52
3222 6470 5.526115 TGTATTAGCATACTGTAGTTCGGC 58.474 41.667 0.00 0.00 36.87 5.54
3223 6471 7.201145 AGTTGTATTAGCATACTGTAGTTCGG 58.799 38.462 0.00 0.00 36.87 4.30
3224 6472 8.532341 CAAGTTGTATTAGCATACTGTAGTTCG 58.468 37.037 0.00 0.00 36.87 3.95
3225 6473 9.367444 ACAAGTTGTATTAGCATACTGTAGTTC 57.633 33.333 6.75 0.00 36.87 3.01
3226 6474 9.151471 CACAAGTTGTATTAGCATACTGTAGTT 57.849 33.333 8.49 0.00 36.87 2.24
3227 6475 8.311836 ACACAAGTTGTATTAGCATACTGTAGT 58.688 33.333 8.49 0.00 36.32 2.73
3228 6476 8.703604 ACACAAGTTGTATTAGCATACTGTAG 57.296 34.615 8.49 0.00 36.32 2.74
3229 6477 9.496873 AAACACAAGTTGTATTAGCATACTGTA 57.503 29.630 8.49 0.00 37.51 2.74
3230 6478 7.979444 AACACAAGTTGTATTAGCATACTGT 57.021 32.000 8.49 0.00 37.51 3.55
3231 6479 9.755064 GTAAACACAAGTTGTATTAGCATACTG 57.245 33.333 8.49 0.00 37.51 2.74
3232 6480 9.496873 TGTAAACACAAGTTGTATTAGCATACT 57.503 29.630 8.49 0.00 37.51 2.12
3235 6483 9.624697 CAATGTAAACACAAGTTGTATTAGCAT 57.375 29.630 8.49 8.94 37.51 3.79
3236 6484 8.625651 ACAATGTAAACACAAGTTGTATTAGCA 58.374 29.630 8.49 7.01 37.51 3.49
3237 6485 9.113876 GACAATGTAAACACAAGTTGTATTAGC 57.886 33.333 8.49 1.28 37.51 3.09
3240 6488 8.134895 CCAGACAATGTAAACACAAGTTGTATT 58.865 33.333 8.49 9.52 37.51 1.89
3241 6489 7.648142 CCAGACAATGTAAACACAAGTTGTAT 58.352 34.615 8.49 0.00 37.51 2.29
3242 6490 6.459024 GCCAGACAATGTAAACACAAGTTGTA 60.459 38.462 8.49 0.00 37.51 2.41
3243 6491 5.678616 GCCAGACAATGTAAACACAAGTTGT 60.679 40.000 1.64 1.64 41.74 3.32
3244 6492 4.739716 GCCAGACAATGTAAACACAAGTTG 59.260 41.667 0.00 0.00 38.17 3.16
3245 6493 4.400884 TGCCAGACAATGTAAACACAAGTT 59.599 37.500 0.00 0.00 40.40 2.66
3246 6494 3.951037 TGCCAGACAATGTAAACACAAGT 59.049 39.130 0.00 0.00 0.00 3.16
3247 6495 4.566545 TGCCAGACAATGTAAACACAAG 57.433 40.909 0.00 0.00 0.00 3.16
3248 6496 4.022416 GGATGCCAGACAATGTAAACACAA 60.022 41.667 0.00 0.00 0.00 3.33
3249 6497 3.505680 GGATGCCAGACAATGTAAACACA 59.494 43.478 0.00 0.00 0.00 3.72
3250 6498 3.426159 CGGATGCCAGACAATGTAAACAC 60.426 47.826 0.00 0.00 0.00 3.32
3251 6499 2.746904 CGGATGCCAGACAATGTAAACA 59.253 45.455 0.00 0.00 0.00 2.83
3252 6500 2.097466 CCGGATGCCAGACAATGTAAAC 59.903 50.000 0.00 0.00 0.00 2.01
3253 6501 2.364632 CCGGATGCCAGACAATGTAAA 58.635 47.619 0.00 0.00 0.00 2.01
3254 6502 2.016604 GCCGGATGCCAGACAATGTAA 61.017 52.381 5.05 0.00 0.00 2.41
3255 6503 0.463654 GCCGGATGCCAGACAATGTA 60.464 55.000 5.05 0.00 0.00 2.29
3256 6504 1.750399 GCCGGATGCCAGACAATGT 60.750 57.895 5.05 0.00 0.00 2.71
3257 6505 1.750018 TGCCGGATGCCAGACAATG 60.750 57.895 5.05 0.00 40.16 2.82
3258 6506 1.750399 GTGCCGGATGCCAGACAAT 60.750 57.895 5.05 0.00 40.16 2.71
3259 6507 2.359850 GTGCCGGATGCCAGACAA 60.360 61.111 5.05 0.00 40.16 3.18
3260 6508 3.189376 TTGTGCCGGATGCCAGACA 62.189 57.895 5.05 0.00 40.16 3.41
3261 6509 2.359850 TTGTGCCGGATGCCAGAC 60.360 61.111 5.05 0.00 40.16 3.51
3262 6510 2.359850 GTTGTGCCGGATGCCAGA 60.360 61.111 5.05 0.00 40.16 3.86
3263 6511 3.443045 GGTTGTGCCGGATGCCAG 61.443 66.667 5.05 0.00 40.16 4.85
3264 6512 3.799286 TTGGTTGTGCCGGATGCCA 62.799 57.895 5.05 2.13 41.21 4.92
3265 6513 2.988684 TTGGTTGTGCCGGATGCC 60.989 61.111 5.05 0.00 41.21 4.40
3266 6514 2.081425 TTGTTGGTTGTGCCGGATGC 62.081 55.000 5.05 0.00 41.21 3.91
3267 6515 0.039256 CTTGTTGGTTGTGCCGGATG 60.039 55.000 5.05 0.00 41.21 3.51
3268 6516 1.805428 GCTTGTTGGTTGTGCCGGAT 61.805 55.000 5.05 0.00 41.21 4.18
3269 6517 2.485795 GCTTGTTGGTTGTGCCGGA 61.486 57.895 5.05 0.00 41.21 5.14
3270 6518 2.027460 GCTTGTTGGTTGTGCCGG 59.973 61.111 0.00 0.00 41.21 6.13
3271 6519 2.353376 CGCTTGTTGGTTGTGCCG 60.353 61.111 0.00 0.00 41.21 5.69
3272 6520 1.299089 GTCGCTTGTTGGTTGTGCC 60.299 57.895 0.00 0.00 37.90 5.01
3273 6521 1.654137 CGTCGCTTGTTGGTTGTGC 60.654 57.895 0.00 0.00 0.00 4.57
3274 6522 1.654137 GCGTCGCTTGTTGGTTGTG 60.654 57.895 10.68 0.00 0.00 3.33
3275 6523 1.772063 GAGCGTCGCTTGTTGGTTGT 61.772 55.000 22.67 0.00 39.88 3.32
3276 6524 1.082756 GAGCGTCGCTTGTTGGTTG 60.083 57.895 22.67 0.00 39.88 3.77
3277 6525 1.092921 TTGAGCGTCGCTTGTTGGTT 61.093 50.000 22.67 0.00 39.88 3.67
3278 6526 1.092921 TTTGAGCGTCGCTTGTTGGT 61.093 50.000 22.67 0.00 39.88 3.67
3279 6527 0.238289 ATTTGAGCGTCGCTTGTTGG 59.762 50.000 22.67 0.00 39.88 3.77
3280 6528 2.036556 AATTTGAGCGTCGCTTGTTG 57.963 45.000 22.67 0.00 39.88 3.33
3281 6529 2.774439 AAATTTGAGCGTCGCTTGTT 57.226 40.000 22.67 10.86 39.88 2.83
3282 6530 2.774439 AAAATTTGAGCGTCGCTTGT 57.226 40.000 22.67 0.00 39.88 3.16
3301 6549 6.606234 TGCGTCTGTACTAATGTTCAAAAA 57.394 33.333 0.00 0.00 0.00 1.94
3302 6550 6.606234 TTGCGTCTGTACTAATGTTCAAAA 57.394 33.333 0.00 0.00 0.00 2.44
3303 6551 5.333798 GCTTGCGTCTGTACTAATGTTCAAA 60.334 40.000 0.00 0.00 0.00 2.69
3304 6552 4.151689 GCTTGCGTCTGTACTAATGTTCAA 59.848 41.667 0.00 0.00 0.00 2.69
3305 6553 3.678072 GCTTGCGTCTGTACTAATGTTCA 59.322 43.478 0.00 0.00 0.00 3.18
3306 6554 3.241678 CGCTTGCGTCTGTACTAATGTTC 60.242 47.826 6.86 0.00 0.00 3.18
3307 6555 2.666508 CGCTTGCGTCTGTACTAATGTT 59.333 45.455 6.86 0.00 0.00 2.71
3308 6556 2.259618 CGCTTGCGTCTGTACTAATGT 58.740 47.619 6.86 0.00 0.00 2.71
3309 6557 1.005975 GCGCTTGCGTCTGTACTAATG 60.006 52.381 16.38 0.00 0.00 1.90
3310 6558 1.135083 AGCGCTTGCGTCTGTACTAAT 60.135 47.619 16.38 0.00 45.69 1.73
3311 6559 0.242825 AGCGCTTGCGTCTGTACTAA 59.757 50.000 16.38 0.00 45.69 2.24
3312 6560 0.179171 GAGCGCTTGCGTCTGTACTA 60.179 55.000 13.26 0.00 45.69 1.82
3313 6561 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
3314 6562 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
3315 6563 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
3316 6564 1.078759 GTATGAGCGCTTGCGTCTGT 61.079 55.000 13.26 7.66 45.69 3.41
3317 6565 1.633171 GTATGAGCGCTTGCGTCTG 59.367 57.895 13.26 0.00 45.69 3.51
3318 6566 1.874019 CGTATGAGCGCTTGCGTCT 60.874 57.895 13.26 13.17 45.69 4.18
3319 6567 0.864377 TACGTATGAGCGCTTGCGTC 60.864 55.000 24.86 7.55 45.69 5.19
3320 6568 1.138036 TACGTATGAGCGCTTGCGT 59.862 52.632 24.60 24.60 45.69 5.24
3321 6569 1.553654 GTACGTATGAGCGCTTGCG 59.446 57.895 13.26 15.22 45.69 4.85
3322 6570 1.553654 CGTACGTATGAGCGCTTGC 59.446 57.895 13.26 0.00 39.58 4.01
3323 6571 1.553654 GCGTACGTATGAGCGCTTG 59.446 57.895 18.93 1.88 45.48 4.01
3324 6572 1.937846 CGCGTACGTATGAGCGCTT 60.938 57.895 22.73 0.00 46.56 4.68
3325 6573 2.352001 CGCGTACGTATGAGCGCT 60.352 61.111 22.73 11.27 46.56 5.92
3328 6576 0.701303 GTATGCGCGTACGTATGAGC 59.299 55.000 29.52 29.52 44.69 4.26
3329 6577 1.707117 GTGTATGCGCGTACGTATGAG 59.293 52.381 29.20 16.09 44.69 2.90
3330 6578 1.331447 AGTGTATGCGCGTACGTATGA 59.669 47.619 29.20 12.97 44.69 2.15
3331 6579 1.707117 GAGTGTATGCGCGTACGTATG 59.293 52.381 29.20 10.54 44.69 2.39
3332 6580 1.331447 TGAGTGTATGCGCGTACGTAT 59.669 47.619 29.20 19.60 46.73 3.06
3333 6581 0.726256 TGAGTGTATGCGCGTACGTA 59.274 50.000 29.20 14.33 42.83 3.57
3334 6582 0.099968 ATGAGTGTATGCGCGTACGT 59.900 50.000 29.20 21.19 42.83 3.57
3335 6583 0.770590 GATGAGTGTATGCGCGTACG 59.229 55.000 29.20 11.84 44.07 3.67
3336 6584 1.129326 GGATGAGTGTATGCGCGTAC 58.871 55.000 28.80 28.80 0.00 3.67
3337 6585 0.031585 GGGATGAGTGTATGCGCGTA 59.968 55.000 8.43 4.92 0.00 4.42
3338 6586 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
3339 6587 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
3340 6588 2.341257 CATAGGGATGAGTGTATGCGC 58.659 52.381 0.00 0.00 34.73 6.09
3341 6589 2.562738 TCCATAGGGATGAGTGTATGCG 59.437 50.000 0.00 0.00 38.64 4.73
3356 6604 3.913573 GTGTGCGCGCGTCCATAG 61.914 66.667 32.35 0.92 0.00 2.23
3357 6605 4.726351 TGTGTGCGCGCGTCCATA 62.726 61.111 32.35 21.98 0.00 2.74
3361 6609 4.776953 GATGTGTGTGCGCGCGTC 62.777 66.667 32.35 23.18 0.00 5.19
3364 6612 2.094126 GATAGGATGTGTGTGCGCGC 62.094 60.000 27.26 27.26 0.00 6.86
3365 6613 1.490693 GGATAGGATGTGTGTGCGCG 61.491 60.000 0.00 0.00 0.00 6.86
3366 6614 1.160329 GGGATAGGATGTGTGTGCGC 61.160 60.000 0.00 0.00 0.00 6.09
3367 6615 0.465705 AGGGATAGGATGTGTGTGCG 59.534 55.000 0.00 0.00 0.00 5.34
3368 6616 3.324846 TCATAGGGATAGGATGTGTGTGC 59.675 47.826 0.00 0.00 0.00 4.57
3369 6617 4.020751 CCTCATAGGGATAGGATGTGTGTG 60.021 50.000 0.00 0.00 31.64 3.82
3370 6618 4.163427 CCTCATAGGGATAGGATGTGTGT 58.837 47.826 0.00 0.00 31.64 3.72
3371 6619 4.815533 CCTCATAGGGATAGGATGTGTG 57.184 50.000 0.00 0.00 31.64 3.82
3390 6638 3.275228 ACTTAGATGGTTAGAGGGACCCT 59.725 47.826 14.79 14.79 36.30 4.34
3391 6639 3.655384 ACTTAGATGGTTAGAGGGACCC 58.345 50.000 0.59 0.59 36.30 4.46
3392 6640 6.553852 TGAATACTTAGATGGTTAGAGGGACC 59.446 42.308 0.00 0.00 37.69 4.46
3393 6641 7.598759 TGAATACTTAGATGGTTAGAGGGAC 57.401 40.000 0.00 0.00 0.00 4.46
3394 6642 7.844779 AGTTGAATACTTAGATGGTTAGAGGGA 59.155 37.037 0.00 0.00 31.29 4.20
3395 6643 8.024145 AGTTGAATACTTAGATGGTTAGAGGG 57.976 38.462 0.00 0.00 31.29 4.30
3396 6644 9.968870 GTAGTTGAATACTTAGATGGTTAGAGG 57.031 37.037 0.00 0.00 38.33 3.69
3397 6645 9.968870 GGTAGTTGAATACTTAGATGGTTAGAG 57.031 37.037 0.00 0.00 38.33 2.43
3398 6646 9.710818 AGGTAGTTGAATACTTAGATGGTTAGA 57.289 33.333 0.00 0.00 38.33 2.10
3401 6649 8.822805 TGAAGGTAGTTGAATACTTAGATGGTT 58.177 33.333 0.00 0.00 38.33 3.67
3402 6650 8.375493 TGAAGGTAGTTGAATACTTAGATGGT 57.625 34.615 0.00 0.00 38.33 3.55
3403 6651 9.667107 TTTGAAGGTAGTTGAATACTTAGATGG 57.333 33.333 0.00 0.00 38.33 3.51
3430 6678 4.469657 TCATGAACCAGCCTGTAGTTTTT 58.530 39.130 0.00 0.00 0.00 1.94
3431 6679 4.098914 TCATGAACCAGCCTGTAGTTTT 57.901 40.909 0.00 0.00 0.00 2.43
3432 6680 3.788227 TCATGAACCAGCCTGTAGTTT 57.212 42.857 0.00 0.00 0.00 2.66
3433 6681 3.264193 TCATCATGAACCAGCCTGTAGTT 59.736 43.478 0.00 0.00 0.00 2.24
3434 6682 2.840038 TCATCATGAACCAGCCTGTAGT 59.160 45.455 0.00 0.00 0.00 2.73
3435 6683 3.201290 GTCATCATGAACCAGCCTGTAG 58.799 50.000 0.00 0.00 0.00 2.74
3436 6684 2.418609 CGTCATCATGAACCAGCCTGTA 60.419 50.000 0.00 0.00 0.00 2.74
3437 6685 1.676916 CGTCATCATGAACCAGCCTGT 60.677 52.381 0.00 0.00 0.00 4.00
3438 6686 1.012086 CGTCATCATGAACCAGCCTG 58.988 55.000 0.00 0.00 0.00 4.85
3439 6687 0.745845 GCGTCATCATGAACCAGCCT 60.746 55.000 0.00 0.00 0.00 4.58
3440 6688 0.745845 AGCGTCATCATGAACCAGCC 60.746 55.000 0.00 0.00 0.00 4.85
3441 6689 0.654683 GAGCGTCATCATGAACCAGC 59.345 55.000 0.00 3.94 0.00 4.85
3442 6690 2.014335 TGAGCGTCATCATGAACCAG 57.986 50.000 0.00 0.00 0.00 4.00
3443 6691 2.470983 TTGAGCGTCATCATGAACCA 57.529 45.000 0.00 0.00 0.00 3.67
3444 6692 4.361451 AAATTGAGCGTCATCATGAACC 57.639 40.909 0.00 0.00 0.00 3.62
3445 6693 5.393124 TGAAAATTGAGCGTCATCATGAAC 58.607 37.500 0.00 0.00 0.00 3.18
3446 6694 5.625921 TGAAAATTGAGCGTCATCATGAA 57.374 34.783 0.00 0.00 0.00 2.57
3447 6695 5.625921 TTGAAAATTGAGCGTCATCATGA 57.374 34.783 0.00 0.00 0.00 3.07
3448 6696 6.528774 TCAATTGAAAATTGAGCGTCATCATG 59.471 34.615 5.45 0.00 33.55 3.07
3449 6697 6.623486 TCAATTGAAAATTGAGCGTCATCAT 58.377 32.000 5.45 0.00 33.55 2.45
3450 6698 6.011476 TCAATTGAAAATTGAGCGTCATCA 57.989 33.333 5.45 0.00 33.55 3.07
3451 6699 6.932901 TTCAATTGAAAATTGAGCGTCATC 57.067 33.333 18.45 0.00 38.98 2.92
3464 6712 9.308000 ACTGTGAGGGTTTATATTCAATTGAAA 57.692 29.630 23.91 13.76 37.61 2.69
3465 6713 8.877864 ACTGTGAGGGTTTATATTCAATTGAA 57.122 30.769 22.52 22.52 38.56 2.69
3466 6714 8.877864 AACTGTGAGGGTTTATATTCAATTGA 57.122 30.769 3.38 3.38 0.00 2.57
3467 6715 9.573133 GAAACTGTGAGGGTTTATATTCAATTG 57.427 33.333 0.00 0.00 37.07 2.32
3468 6716 9.308000 TGAAACTGTGAGGGTTTATATTCAATT 57.692 29.630 0.00 0.00 37.07 2.32
3469 6717 8.877864 TGAAACTGTGAGGGTTTATATTCAAT 57.122 30.769 0.00 0.00 37.07 2.57
3470 6718 8.160765 TCTGAAACTGTGAGGGTTTATATTCAA 58.839 33.333 0.00 0.00 37.07 2.69
3471 6719 7.685481 TCTGAAACTGTGAGGGTTTATATTCA 58.315 34.615 0.00 0.00 37.07 2.57
3472 6720 8.561738 TTCTGAAACTGTGAGGGTTTATATTC 57.438 34.615 0.00 0.00 37.07 1.75
3473 6721 8.164070 ACTTCTGAAACTGTGAGGGTTTATATT 58.836 33.333 0.00 0.00 37.07 1.28
3474 6722 7.690256 ACTTCTGAAACTGTGAGGGTTTATAT 58.310 34.615 0.00 0.00 37.07 0.86
3475 6723 7.074653 ACTTCTGAAACTGTGAGGGTTTATA 57.925 36.000 0.00 0.00 37.07 0.98
3476 6724 5.941788 ACTTCTGAAACTGTGAGGGTTTAT 58.058 37.500 0.00 0.00 37.07 1.40
3477 6725 5.367945 ACTTCTGAAACTGTGAGGGTTTA 57.632 39.130 0.00 0.00 37.07 2.01
3478 6726 4.236527 ACTTCTGAAACTGTGAGGGTTT 57.763 40.909 0.00 0.00 39.25 3.27
3479 6727 3.933861 ACTTCTGAAACTGTGAGGGTT 57.066 42.857 0.00 0.00 0.00 4.11
3480 6728 3.933861 AACTTCTGAAACTGTGAGGGT 57.066 42.857 0.00 0.00 0.00 4.34
3481 6729 4.455606 AGAAACTTCTGAAACTGTGAGGG 58.544 43.478 0.00 0.00 35.89 4.30
3482 6730 5.586243 TCAAGAAACTTCTGAAACTGTGAGG 59.414 40.000 0.00 0.00 37.65 3.86
3483 6731 6.668541 TCAAGAAACTTCTGAAACTGTGAG 57.331 37.500 0.00 0.00 37.65 3.51
3484 6732 7.050377 AGATCAAGAAACTTCTGAAACTGTGA 58.950 34.615 0.00 0.00 37.65 3.58
3485 6733 7.256756 AGATCAAGAAACTTCTGAAACTGTG 57.743 36.000 0.00 0.00 37.65 3.66
3486 6734 7.987458 TGTAGATCAAGAAACTTCTGAAACTGT 59.013 33.333 0.00 0.00 37.65 3.55
3487 6735 8.370493 TGTAGATCAAGAAACTTCTGAAACTG 57.630 34.615 0.00 0.00 37.65 3.16
3488 6736 8.207545 ACTGTAGATCAAGAAACTTCTGAAACT 58.792 33.333 0.00 0.00 37.65 2.66
3489 6737 8.371770 ACTGTAGATCAAGAAACTTCTGAAAC 57.628 34.615 0.00 0.00 37.65 2.78
3498 6746 8.983724 GCCATCTTATACTGTAGATCAAGAAAC 58.016 37.037 0.00 0.00 0.00 2.78
3499 6747 8.150945 GGCCATCTTATACTGTAGATCAAGAAA 58.849 37.037 0.00 0.00 0.00 2.52
3500 6748 7.290014 TGGCCATCTTATACTGTAGATCAAGAA 59.710 37.037 0.00 0.00 0.00 2.52
3501 6749 6.782494 TGGCCATCTTATACTGTAGATCAAGA 59.218 38.462 0.00 0.96 0.00 3.02
3502 6750 6.997655 TGGCCATCTTATACTGTAGATCAAG 58.002 40.000 0.00 0.00 0.00 3.02
3503 6751 6.994421 TGGCCATCTTATACTGTAGATCAA 57.006 37.500 0.00 0.00 0.00 2.57
3504 6752 8.699130 CATATGGCCATCTTATACTGTAGATCA 58.301 37.037 24.80 0.00 0.00 2.92
3505 6753 7.655328 GCATATGGCCATCTTATACTGTAGATC 59.345 40.741 24.80 0.00 36.11 2.75
3506 6754 7.504403 GCATATGGCCATCTTATACTGTAGAT 58.496 38.462 24.80 1.71 36.11 1.98
3507 6755 6.405842 CGCATATGGCCATCTTATACTGTAGA 60.406 42.308 24.80 0.00 40.31 2.59
3508 6756 5.750547 CGCATATGGCCATCTTATACTGTAG 59.249 44.000 24.80 0.00 40.31 2.74
3509 6757 5.420739 TCGCATATGGCCATCTTATACTGTA 59.579 40.000 24.80 0.00 40.31 2.74
3510 6758 4.222810 TCGCATATGGCCATCTTATACTGT 59.777 41.667 24.80 0.00 40.31 3.55
3511 6759 4.758688 TCGCATATGGCCATCTTATACTG 58.241 43.478 24.80 10.34 40.31 2.74
3512 6760 5.420725 TTCGCATATGGCCATCTTATACT 57.579 39.130 24.80 0.00 40.31 2.12
3513 6761 4.034510 GCTTCGCATATGGCCATCTTATAC 59.965 45.833 24.80 4.17 40.31 1.47
3514 6762 4.191544 GCTTCGCATATGGCCATCTTATA 58.808 43.478 24.80 4.10 40.31 0.98
3515 6763 3.012518 GCTTCGCATATGGCCATCTTAT 58.987 45.455 24.80 7.72 40.31 1.73
3516 6764 2.224499 TGCTTCGCATATGGCCATCTTA 60.224 45.455 24.80 5.04 40.31 2.10
3517 6765 1.242076 GCTTCGCATATGGCCATCTT 58.758 50.000 24.80 8.59 40.31 2.40
3518 6766 0.109153 TGCTTCGCATATGGCCATCT 59.891 50.000 24.80 10.30 40.31 2.90
3519 6767 0.520404 CTGCTTCGCATATGGCCATC 59.480 55.000 24.80 7.24 38.13 3.51
3520 6768 0.179009 ACTGCTTCGCATATGGCCAT 60.179 50.000 24.45 24.45 38.13 4.40
3521 6769 0.815213 GACTGCTTCGCATATGGCCA 60.815 55.000 8.56 8.56 38.13 5.36
3522 6770 1.510480 GGACTGCTTCGCATATGGCC 61.510 60.000 4.56 0.00 38.13 5.36
3523 6771 0.815213 TGGACTGCTTCGCATATGGC 60.815 55.000 4.56 0.00 38.13 4.40
3524 6772 1.667236 TTGGACTGCTTCGCATATGG 58.333 50.000 4.56 0.00 38.13 2.74
3525 6773 2.938451 TCTTTGGACTGCTTCGCATATG 59.062 45.455 0.00 0.00 38.13 1.78
3526 6774 3.201290 CTCTTTGGACTGCTTCGCATAT 58.799 45.455 0.00 0.00 38.13 1.78
3527 6775 2.028112 ACTCTTTGGACTGCTTCGCATA 60.028 45.455 0.00 0.00 38.13 3.14
3528 6776 1.271054 ACTCTTTGGACTGCTTCGCAT 60.271 47.619 0.00 0.00 38.13 4.73
3529 6777 0.106708 ACTCTTTGGACTGCTTCGCA 59.893 50.000 0.00 0.00 36.92 5.10
3530 6778 1.069636 CAACTCTTTGGACTGCTTCGC 60.070 52.381 0.00 0.00 0.00 4.70
3531 6779 2.957576 CAACTCTTTGGACTGCTTCG 57.042 50.000 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.