Multiple sequence alignment - TraesCS7A01G073500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G073500 chr7A 100.000 2549 0 0 1 2549 39014796 39017344 0.000000e+00 4708.0
1 TraesCS7A01G073500 chr2B 99.646 1978 7 0 572 2549 776222961 776224938 0.000000e+00 3615.0
2 TraesCS7A01G073500 chr2B 99.242 1978 15 0 572 2549 781094240 781096217 0.000000e+00 3570.0
3 TraesCS7A01G073500 chr2B 97.619 42 1 0 531 572 767466245 767466286 3.520000e-09 73.1
4 TraesCS7A01G073500 chr3A 99.495 1979 9 1 571 2549 54951916 54953893 0.000000e+00 3598.0
5 TraesCS7A01G073500 chr1B 99.345 1986 12 1 564 2549 302243308 302241324 0.000000e+00 3594.0
6 TraesCS7A01G073500 chr5B 99.343 1980 12 1 571 2549 641128781 641126802 0.000000e+00 3583.0
7 TraesCS7A01G073500 chr5B 99.343 1979 6 4 572 2549 158571213 158569241 0.000000e+00 3576.0
8 TraesCS7A01G073500 chr3B 99.292 1978 13 1 572 2549 702857655 702855679 0.000000e+00 3574.0
9 TraesCS7A01G073500 chr3B 99.141 1979 17 0 571 2549 20305086 20307064 0.000000e+00 3561.0
10 TraesCS7A01G073500 chr3B 86.159 289 34 5 285 572 757705415 757705698 8.860000e-80 307.0
11 TraesCS7A01G073500 chr4B 99.192 1979 14 2 572 2549 368430368 368428391 0.000000e+00 3565.0
12 TraesCS7A01G073500 chr1D 87.607 234 24 5 350 582 415978626 415978855 1.500000e-67 267.0
13 TraesCS7A01G073500 chr7B 93.478 46 3 0 531 576 102800745 102800790 4.550000e-08 69.4
14 TraesCS7A01G073500 chr6B 97.297 37 1 0 536 572 85792689 85792653 2.120000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G073500 chr7A 39014796 39017344 2548 False 4708 4708 100.000 1 2549 1 chr7A.!!$F1 2548
1 TraesCS7A01G073500 chr2B 776222961 776224938 1977 False 3615 3615 99.646 572 2549 1 chr2B.!!$F2 1977
2 TraesCS7A01G073500 chr2B 781094240 781096217 1977 False 3570 3570 99.242 572 2549 1 chr2B.!!$F3 1977
3 TraesCS7A01G073500 chr3A 54951916 54953893 1977 False 3598 3598 99.495 571 2549 1 chr3A.!!$F1 1978
4 TraesCS7A01G073500 chr1B 302241324 302243308 1984 True 3594 3594 99.345 564 2549 1 chr1B.!!$R1 1985
5 TraesCS7A01G073500 chr5B 641126802 641128781 1979 True 3583 3583 99.343 571 2549 1 chr5B.!!$R2 1978
6 TraesCS7A01G073500 chr5B 158569241 158571213 1972 True 3576 3576 99.343 572 2549 1 chr5B.!!$R1 1977
7 TraesCS7A01G073500 chr3B 702855679 702857655 1976 True 3574 3574 99.292 572 2549 1 chr3B.!!$R1 1977
8 TraesCS7A01G073500 chr3B 20305086 20307064 1978 False 3561 3561 99.141 571 2549 1 chr3B.!!$F1 1978
9 TraesCS7A01G073500 chr4B 368428391 368430368 1977 True 3565 3565 99.192 572 2549 1 chr4B.!!$R1 1977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
542 543 0.035439 ATGTACGGTTGGCTGGAAGG 60.035 55.0 0.0 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2367 2373 3.390175 TTTTCAACCTTCCAACCCTCA 57.61 42.857 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 9.522804 TTTTTCATTGTACGTAAGAAATTGCTT 57.477 25.926 3.62 3.62 43.62 3.91
73 74 8.722342 TTTCATTGTACGTAAGAAATTGCTTC 57.278 30.769 0.59 0.00 43.62 3.86
74 75 7.428282 TCATTGTACGTAAGAAATTGCTTCA 57.572 32.000 0.59 0.00 43.62 3.02
75 76 7.866729 TCATTGTACGTAAGAAATTGCTTCAA 58.133 30.769 0.59 0.82 43.62 2.69
76 77 8.346300 TCATTGTACGTAAGAAATTGCTTCAAA 58.654 29.630 0.59 0.00 43.62 2.69
77 78 7.901874 TTGTACGTAAGAAATTGCTTCAAAC 57.098 32.000 0.59 0.00 43.62 2.93
78 79 6.432107 TGTACGTAAGAAATTGCTTCAAACC 58.568 36.000 0.59 0.00 43.62 3.27
79 80 5.508200 ACGTAAGAAATTGCTTCAAACCA 57.492 34.783 0.59 0.00 43.62 3.67
80 81 5.897050 ACGTAAGAAATTGCTTCAAACCAA 58.103 33.333 0.59 0.00 43.62 3.67
81 82 6.334202 ACGTAAGAAATTGCTTCAAACCAAA 58.666 32.000 0.59 0.00 43.62 3.28
82 83 6.814146 ACGTAAGAAATTGCTTCAAACCAAAA 59.186 30.769 0.59 0.00 43.62 2.44
83 84 7.494298 ACGTAAGAAATTGCTTCAAACCAAAAT 59.506 29.630 0.59 0.00 43.62 1.82
84 85 8.973378 CGTAAGAAATTGCTTCAAACCAAAATA 58.027 29.630 0.59 0.00 43.02 1.40
110 111 7.588497 AAAATAAATGGGCTTATGAGGACTC 57.412 36.000 0.00 0.00 0.00 3.36
111 112 2.918712 AATGGGCTTATGAGGACTCG 57.081 50.000 0.00 0.00 0.00 4.18
112 113 2.088104 ATGGGCTTATGAGGACTCGA 57.912 50.000 0.00 0.00 0.00 4.04
113 114 1.860641 TGGGCTTATGAGGACTCGAA 58.139 50.000 0.00 0.00 0.00 3.71
114 115 1.480954 TGGGCTTATGAGGACTCGAAC 59.519 52.381 0.00 0.00 0.00 3.95
115 116 1.757699 GGGCTTATGAGGACTCGAACT 59.242 52.381 0.00 0.00 0.00 3.01
116 117 2.223852 GGGCTTATGAGGACTCGAACTC 60.224 54.545 4.89 4.89 0.00 3.01
117 118 2.223852 GGCTTATGAGGACTCGAACTCC 60.224 54.545 8.44 5.12 32.80 3.85
118 119 2.427453 GCTTATGAGGACTCGAACTCCA 59.573 50.000 10.67 0.00 32.80 3.86
119 120 3.735514 GCTTATGAGGACTCGAACTCCAC 60.736 52.174 10.67 5.65 32.80 4.02
120 121 1.187087 ATGAGGACTCGAACTCCACC 58.813 55.000 10.67 3.82 32.80 4.61
121 122 0.898789 TGAGGACTCGAACTCCACCC 60.899 60.000 10.67 1.83 32.80 4.61
122 123 1.935327 GAGGACTCGAACTCCACCCG 61.935 65.000 10.67 0.00 0.00 5.28
123 124 2.126031 GACTCGAACTCCACCCGC 60.126 66.667 0.00 0.00 0.00 6.13
124 125 2.600769 ACTCGAACTCCACCCGCT 60.601 61.111 0.00 0.00 0.00 5.52
125 126 2.156051 GACTCGAACTCCACCCGCTT 62.156 60.000 0.00 0.00 0.00 4.68
126 127 0.896940 ACTCGAACTCCACCCGCTTA 60.897 55.000 0.00 0.00 0.00 3.09
127 128 0.179134 CTCGAACTCCACCCGCTTAG 60.179 60.000 0.00 0.00 0.00 2.18
128 129 0.896940 TCGAACTCCACCCGCTTAGT 60.897 55.000 0.00 0.00 0.00 2.24
129 130 0.037605 CGAACTCCACCCGCTTAGTT 60.038 55.000 0.00 0.00 34.96 2.24
130 131 1.607251 CGAACTCCACCCGCTTAGTTT 60.607 52.381 0.00 0.00 32.51 2.66
131 132 1.804748 GAACTCCACCCGCTTAGTTTG 59.195 52.381 0.00 0.00 32.51 2.93
132 133 1.053424 ACTCCACCCGCTTAGTTTGA 58.947 50.000 0.00 0.00 0.00 2.69
133 134 1.002087 ACTCCACCCGCTTAGTTTGAG 59.998 52.381 0.00 0.00 0.00 3.02
134 135 0.321298 TCCACCCGCTTAGTTTGAGC 60.321 55.000 0.00 0.00 36.79 4.26
135 136 1.305930 CCACCCGCTTAGTTTGAGCC 61.306 60.000 0.00 0.00 36.81 4.70
136 137 1.002502 ACCCGCTTAGTTTGAGCCC 60.003 57.895 0.00 0.00 36.81 5.19
137 138 2.106683 CCCGCTTAGTTTGAGCCCG 61.107 63.158 0.00 0.00 36.81 6.13
138 139 1.375523 CCGCTTAGTTTGAGCCCGT 60.376 57.895 0.00 0.00 36.81 5.28
139 140 1.635663 CCGCTTAGTTTGAGCCCGTG 61.636 60.000 0.00 0.00 36.81 4.94
140 141 1.502190 GCTTAGTTTGAGCCCGTGC 59.498 57.895 0.00 0.00 34.06 5.34
141 142 1.787847 CTTAGTTTGAGCCCGTGCG 59.212 57.895 0.00 0.00 44.33 5.34
142 143 2.240612 CTTAGTTTGAGCCCGTGCGC 62.241 60.000 0.00 0.00 44.33 6.09
143 144 2.997952 TTAGTTTGAGCCCGTGCGCA 62.998 55.000 5.66 5.66 46.01 6.09
148 149 4.683334 GAGCCCGTGCGCACAAAC 62.683 66.667 37.03 25.09 44.33 2.93
151 152 4.326766 CCCGTGCGCACAAACCAG 62.327 66.667 37.03 20.83 0.00 4.00
152 153 4.326766 CCGTGCGCACAAACCAGG 62.327 66.667 37.03 25.43 0.00 4.45
153 154 4.980903 CGTGCGCACAAACCAGGC 62.981 66.667 37.03 10.05 0.00 4.85
154 155 4.645921 GTGCGCACAAACCAGGCC 62.646 66.667 34.52 3.30 0.00 5.19
156 157 4.645921 GCGCACAAACCAGGCCAC 62.646 66.667 5.01 0.00 0.00 5.01
157 158 3.977244 CGCACAAACCAGGCCACC 61.977 66.667 5.01 0.00 0.00 4.61
158 159 2.521708 GCACAAACCAGGCCACCT 60.522 61.111 5.01 0.00 0.00 4.00
159 160 1.228429 GCACAAACCAGGCCACCTA 60.228 57.895 5.01 0.00 29.64 3.08
160 161 0.611896 GCACAAACCAGGCCACCTAT 60.612 55.000 5.01 0.00 29.64 2.57
161 162 1.340600 GCACAAACCAGGCCACCTATA 60.341 52.381 5.01 0.00 29.64 1.31
162 163 2.643551 CACAAACCAGGCCACCTATAG 58.356 52.381 5.01 0.00 29.64 1.31
163 164 1.064685 ACAAACCAGGCCACCTATAGC 60.065 52.381 5.01 0.00 29.64 2.97
164 165 1.212935 CAAACCAGGCCACCTATAGCT 59.787 52.381 5.01 0.00 29.64 3.32
165 166 2.438021 CAAACCAGGCCACCTATAGCTA 59.562 50.000 5.01 0.00 29.64 3.32
166 167 2.489528 ACCAGGCCACCTATAGCTAA 57.510 50.000 5.01 0.00 29.64 3.09
167 168 2.047830 ACCAGGCCACCTATAGCTAAC 58.952 52.381 5.01 0.00 29.64 2.34
168 169 2.330216 CCAGGCCACCTATAGCTAACT 58.670 52.381 5.01 0.00 29.64 2.24
169 170 3.116862 ACCAGGCCACCTATAGCTAACTA 60.117 47.826 5.01 0.00 29.64 2.24
170 171 4.097418 CCAGGCCACCTATAGCTAACTAT 58.903 47.826 5.01 0.00 42.00 2.12
171 172 4.532521 CCAGGCCACCTATAGCTAACTATT 59.467 45.833 5.01 0.00 39.81 1.73
172 173 5.482908 CAGGCCACCTATAGCTAACTATTG 58.517 45.833 5.01 0.00 39.81 1.90
173 174 5.012148 CAGGCCACCTATAGCTAACTATTGT 59.988 44.000 5.01 0.00 39.81 2.71
174 175 5.607171 AGGCCACCTATAGCTAACTATTGTT 59.393 40.000 5.01 0.00 39.81 2.83
175 176 5.701290 GGCCACCTATAGCTAACTATTGTTG 59.299 44.000 0.00 0.00 39.81 3.33
176 177 5.701290 GCCACCTATAGCTAACTATTGTTGG 59.299 44.000 0.00 6.76 42.80 3.77
188 189 8.679288 CTAACTATTGTTGGCATTCTCTTTTG 57.321 34.615 2.59 0.00 37.59 2.44
189 190 5.473039 ACTATTGTTGGCATTCTCTTTTGC 58.527 37.500 0.00 0.00 38.14 3.68
190 191 4.612264 ATTGTTGGCATTCTCTTTTGCT 57.388 36.364 0.00 0.00 38.88 3.91
191 192 3.374220 TGTTGGCATTCTCTTTTGCTG 57.626 42.857 0.00 0.00 38.88 4.41
192 193 2.064014 GTTGGCATTCTCTTTTGCTGC 58.936 47.619 0.00 0.00 38.88 5.25
193 194 3.430779 GGCATTCTCTTTTGCTGCC 57.569 52.632 0.00 0.00 44.91 4.85
195 196 1.706443 GCATTCTCTTTTGCTGCCAC 58.294 50.000 0.00 0.00 35.95 5.01
196 197 1.973138 CATTCTCTTTTGCTGCCACG 58.027 50.000 0.00 0.00 0.00 4.94
197 198 0.242017 ATTCTCTTTTGCTGCCACGC 59.758 50.000 0.00 0.00 0.00 5.34
198 199 0.819259 TTCTCTTTTGCTGCCACGCT 60.819 50.000 0.00 0.00 0.00 5.07
199 200 1.081641 CTCTTTTGCTGCCACGCTG 60.082 57.895 0.00 0.00 0.00 5.18
200 201 2.049802 CTTTTGCTGCCACGCTGG 60.050 61.111 0.00 0.25 41.55 4.85
201 202 2.832661 TTTTGCTGCCACGCTGGT 60.833 55.556 0.00 0.00 40.46 4.00
202 203 3.136345 TTTTGCTGCCACGCTGGTG 62.136 57.895 0.00 0.00 40.46 4.17
203 204 4.873810 TTGCTGCCACGCTGGTGT 62.874 61.111 0.00 0.00 42.80 4.16
204 205 4.873810 TGCTGCCACGCTGGTGTT 62.874 61.111 0.00 0.00 42.80 3.32
205 206 4.030452 GCTGCCACGCTGGTGTTC 62.030 66.667 6.02 0.00 42.80 3.18
206 207 3.716006 CTGCCACGCTGGTGTTCG 61.716 66.667 6.02 0.00 42.80 3.95
213 214 2.870372 GCTGGTGTTCGGCATCAC 59.130 61.111 0.00 0.00 46.73 3.06
214 215 1.965930 GCTGGTGTTCGGCATCACA 60.966 57.895 6.16 0.00 46.73 3.58
215 216 1.915614 GCTGGTGTTCGGCATCACAG 61.916 60.000 6.16 0.00 46.73 3.66
216 217 0.320683 CTGGTGTTCGGCATCACAGA 60.321 55.000 6.16 0.00 34.00 3.41
217 218 0.107643 TGGTGTTCGGCATCACAGAA 59.892 50.000 6.16 0.00 32.36 3.02
218 219 1.234821 GGTGTTCGGCATCACAGAAA 58.765 50.000 6.16 0.00 34.10 2.52
219 220 1.606668 GGTGTTCGGCATCACAGAAAA 59.393 47.619 6.16 0.00 34.10 2.29
220 221 2.034053 GGTGTTCGGCATCACAGAAAAA 59.966 45.455 6.16 0.00 34.10 1.94
221 222 3.042887 GTGTTCGGCATCACAGAAAAAC 58.957 45.455 0.00 0.00 34.10 2.43
222 223 2.685388 TGTTCGGCATCACAGAAAAACA 59.315 40.909 0.00 0.00 34.10 2.83
223 224 3.243035 TGTTCGGCATCACAGAAAAACAG 60.243 43.478 0.00 0.00 34.10 3.16
224 225 2.844946 TCGGCATCACAGAAAAACAGA 58.155 42.857 0.00 0.00 0.00 3.41
225 226 3.210227 TCGGCATCACAGAAAAACAGAA 58.790 40.909 0.00 0.00 0.00 3.02
226 227 3.629855 TCGGCATCACAGAAAAACAGAAA 59.370 39.130 0.00 0.00 0.00 2.52
227 228 4.097135 TCGGCATCACAGAAAAACAGAAAA 59.903 37.500 0.00 0.00 0.00 2.29
228 229 4.803088 CGGCATCACAGAAAAACAGAAAAA 59.197 37.500 0.00 0.00 0.00 1.94
229 230 5.463061 CGGCATCACAGAAAAACAGAAAAAT 59.537 36.000 0.00 0.00 0.00 1.82
230 231 6.640499 CGGCATCACAGAAAAACAGAAAAATA 59.360 34.615 0.00 0.00 0.00 1.40
231 232 7.329226 CGGCATCACAGAAAAACAGAAAAATAT 59.671 33.333 0.00 0.00 0.00 1.28
232 233 9.638239 GGCATCACAGAAAAACAGAAAAATATA 57.362 29.630 0.00 0.00 0.00 0.86
245 246 8.475331 ACAGAAAAATATAGTGTTAGTGACGG 57.525 34.615 0.00 0.00 0.00 4.79
246 247 8.092687 ACAGAAAAATATAGTGTTAGTGACGGT 58.907 33.333 0.00 0.00 0.00 4.83
247 248 8.932791 CAGAAAAATATAGTGTTAGTGACGGTT 58.067 33.333 0.00 0.00 0.00 4.44
248 249 9.148104 AGAAAAATATAGTGTTAGTGACGGTTC 57.852 33.333 0.00 0.00 0.00 3.62
249 250 8.836268 AAAAATATAGTGTTAGTGACGGTTCA 57.164 30.769 0.00 0.00 0.00 3.18
250 251 8.836268 AAAATATAGTGTTAGTGACGGTTCAA 57.164 30.769 0.00 0.00 31.90 2.69
251 252 8.836268 AAATATAGTGTTAGTGACGGTTCAAA 57.164 30.769 0.00 0.00 31.90 2.69
252 253 7.823149 ATATAGTGTTAGTGACGGTTCAAAC 57.177 36.000 0.00 0.00 31.90 2.93
253 254 4.133013 AGTGTTAGTGACGGTTCAAACT 57.867 40.909 0.00 0.00 31.90 2.66
254 255 4.117685 AGTGTTAGTGACGGTTCAAACTC 58.882 43.478 0.00 0.00 31.90 3.01
255 256 4.117685 GTGTTAGTGACGGTTCAAACTCT 58.882 43.478 0.00 0.00 31.90 3.24
256 257 4.025979 GTGTTAGTGACGGTTCAAACTCTG 60.026 45.833 0.00 0.00 31.90 3.35
257 258 2.240493 AGTGACGGTTCAAACTCTGG 57.760 50.000 0.00 0.00 31.90 3.86
258 259 1.760613 AGTGACGGTTCAAACTCTGGA 59.239 47.619 0.00 0.00 31.90 3.86
259 260 1.865340 GTGACGGTTCAAACTCTGGAC 59.135 52.381 0.00 0.00 31.90 4.02
264 265 1.967319 GTTCAAACTCTGGACCAGCA 58.033 50.000 17.33 5.12 0.00 4.41
265 266 1.604278 GTTCAAACTCTGGACCAGCAC 59.396 52.381 17.33 1.12 0.00 4.40
266 267 0.108585 TCAAACTCTGGACCAGCACC 59.891 55.000 17.33 0.00 0.00 5.01
267 268 0.890996 CAAACTCTGGACCAGCACCC 60.891 60.000 17.33 0.00 0.00 4.61
268 269 1.062488 AAACTCTGGACCAGCACCCT 61.062 55.000 17.33 0.00 0.00 4.34
269 270 0.178903 AACTCTGGACCAGCACCCTA 60.179 55.000 17.33 0.00 0.00 3.53
270 271 0.905337 ACTCTGGACCAGCACCCTAC 60.905 60.000 17.33 0.00 0.00 3.18
271 272 1.612442 TCTGGACCAGCACCCTACC 60.612 63.158 17.33 0.00 0.00 3.18
272 273 1.918293 CTGGACCAGCACCCTACCA 60.918 63.158 8.99 0.00 0.00 3.25
273 274 1.229820 TGGACCAGCACCCTACCAT 60.230 57.895 0.00 0.00 0.00 3.55
274 275 1.271840 TGGACCAGCACCCTACCATC 61.272 60.000 0.00 0.00 0.00 3.51
275 276 1.271840 GGACCAGCACCCTACCATCA 61.272 60.000 0.00 0.00 0.00 3.07
276 277 0.618458 GACCAGCACCCTACCATCAA 59.382 55.000 0.00 0.00 0.00 2.57
277 278 1.004277 GACCAGCACCCTACCATCAAA 59.996 52.381 0.00 0.00 0.00 2.69
278 279 1.427368 ACCAGCACCCTACCATCAAAA 59.573 47.619 0.00 0.00 0.00 2.44
279 280 2.158385 ACCAGCACCCTACCATCAAAAA 60.158 45.455 0.00 0.00 0.00 1.94
280 281 2.493278 CCAGCACCCTACCATCAAAAAG 59.507 50.000 0.00 0.00 0.00 2.27
281 282 3.420893 CAGCACCCTACCATCAAAAAGA 58.579 45.455 0.00 0.00 0.00 2.52
282 283 3.191371 CAGCACCCTACCATCAAAAAGAC 59.809 47.826 0.00 0.00 0.00 3.01
283 284 3.153919 GCACCCTACCATCAAAAAGACA 58.846 45.455 0.00 0.00 0.00 3.41
284 285 3.057526 GCACCCTACCATCAAAAAGACAC 60.058 47.826 0.00 0.00 0.00 3.67
285 286 4.141287 CACCCTACCATCAAAAAGACACA 58.859 43.478 0.00 0.00 0.00 3.72
286 287 4.582656 CACCCTACCATCAAAAAGACACAA 59.417 41.667 0.00 0.00 0.00 3.33
287 288 4.583073 ACCCTACCATCAAAAAGACACAAC 59.417 41.667 0.00 0.00 0.00 3.32
288 289 4.827284 CCCTACCATCAAAAAGACACAACT 59.173 41.667 0.00 0.00 0.00 3.16
289 290 6.001460 CCCTACCATCAAAAAGACACAACTA 58.999 40.000 0.00 0.00 0.00 2.24
290 291 6.488683 CCCTACCATCAAAAAGACACAACTAA 59.511 38.462 0.00 0.00 0.00 2.24
291 292 7.308589 CCCTACCATCAAAAAGACACAACTAAG 60.309 40.741 0.00 0.00 0.00 2.18
292 293 5.831997 ACCATCAAAAAGACACAACTAAGC 58.168 37.500 0.00 0.00 0.00 3.09
293 294 5.594317 ACCATCAAAAAGACACAACTAAGCT 59.406 36.000 0.00 0.00 0.00 3.74
294 295 5.916883 CCATCAAAAAGACACAACTAAGCTG 59.083 40.000 0.00 0.00 0.00 4.24
295 296 5.499139 TCAAAAAGACACAACTAAGCTGG 57.501 39.130 0.00 0.00 0.00 4.85
296 297 4.947388 TCAAAAAGACACAACTAAGCTGGT 59.053 37.500 0.00 0.00 0.00 4.00
297 298 5.417580 TCAAAAAGACACAACTAAGCTGGTT 59.582 36.000 0.00 0.00 0.00 3.67
298 299 6.600032 TCAAAAAGACACAACTAAGCTGGTTA 59.400 34.615 5.23 0.00 0.00 2.85
299 300 7.284489 TCAAAAAGACACAACTAAGCTGGTTAT 59.716 33.333 0.00 0.00 0.00 1.89
300 301 7.582667 AAAAGACACAACTAAGCTGGTTATT 57.417 32.000 0.00 0.00 0.00 1.40
301 302 8.685838 AAAAGACACAACTAAGCTGGTTATTA 57.314 30.769 0.00 0.00 0.00 0.98
302 303 7.907214 AAGACACAACTAAGCTGGTTATTAG 57.093 36.000 0.00 0.00 35.54 1.73
303 304 7.005709 AGACACAACTAAGCTGGTTATTAGT 57.994 36.000 0.00 0.00 42.56 2.24
304 305 7.097834 AGACACAACTAAGCTGGTTATTAGTC 58.902 38.462 0.00 9.80 40.47 2.59
305 306 7.005709 ACACAACTAAGCTGGTTATTAGTCT 57.994 36.000 0.00 0.00 40.47 3.24
306 307 6.874134 ACACAACTAAGCTGGTTATTAGTCTG 59.126 38.462 0.00 4.28 40.47 3.51
307 308 6.874134 CACAACTAAGCTGGTTATTAGTCTGT 59.126 38.462 0.00 4.76 40.47 3.41
308 309 6.874134 ACAACTAAGCTGGTTATTAGTCTGTG 59.126 38.462 0.00 0.00 40.47 3.66
309 310 6.852420 ACTAAGCTGGTTATTAGTCTGTGA 57.148 37.500 0.00 0.00 37.63 3.58
310 311 6.631962 ACTAAGCTGGTTATTAGTCTGTGAC 58.368 40.000 0.00 0.00 37.63 3.67
311 312 5.483685 AAGCTGGTTATTAGTCTGTGACA 57.516 39.130 0.00 0.00 34.60 3.58
312 313 5.483685 AGCTGGTTATTAGTCTGTGACAA 57.516 39.130 0.00 0.00 34.60 3.18
313 314 5.865085 AGCTGGTTATTAGTCTGTGACAAA 58.135 37.500 0.00 0.00 34.60 2.83
314 315 6.296026 AGCTGGTTATTAGTCTGTGACAAAA 58.704 36.000 0.00 0.00 34.60 2.44
315 316 6.942576 AGCTGGTTATTAGTCTGTGACAAAAT 59.057 34.615 0.00 2.93 34.60 1.82
316 317 7.448469 AGCTGGTTATTAGTCTGTGACAAAATT 59.552 33.333 0.00 0.00 34.60 1.82
317 318 7.538678 GCTGGTTATTAGTCTGTGACAAAATTG 59.461 37.037 0.46 0.00 34.60 2.32
318 319 8.684386 TGGTTATTAGTCTGTGACAAAATTGA 57.316 30.769 0.00 0.00 34.60 2.57
319 320 9.126151 TGGTTATTAGTCTGTGACAAAATTGAA 57.874 29.630 0.00 0.00 34.60 2.69
342 343 8.789762 TGAATTTGTTTAGTAGTTAAAGAGCCC 58.210 33.333 0.00 0.00 32.07 5.19
343 344 8.700439 AATTTGTTTAGTAGTTAAAGAGCCCA 57.300 30.769 0.00 0.00 32.07 5.36
344 345 7.500720 TTTGTTTAGTAGTTAAAGAGCCCAC 57.499 36.000 0.00 0.00 32.07 4.61
345 346 5.232463 TGTTTAGTAGTTAAAGAGCCCACG 58.768 41.667 0.00 0.00 32.07 4.94
346 347 5.221501 TGTTTAGTAGTTAAAGAGCCCACGT 60.222 40.000 0.00 0.00 32.07 4.49
347 348 3.589495 AGTAGTTAAAGAGCCCACGTC 57.411 47.619 0.00 0.00 0.00 4.34
348 349 2.895404 AGTAGTTAAAGAGCCCACGTCA 59.105 45.455 0.00 0.00 0.00 4.35
349 350 2.165319 AGTTAAAGAGCCCACGTCAC 57.835 50.000 0.00 0.00 0.00 3.67
350 351 1.692519 AGTTAAAGAGCCCACGTCACT 59.307 47.619 0.00 0.00 0.00 3.41
351 352 2.104281 AGTTAAAGAGCCCACGTCACTT 59.896 45.455 0.00 0.00 0.00 3.16
352 353 2.450609 TAAAGAGCCCACGTCACTTC 57.549 50.000 0.00 0.00 0.00 3.01
353 354 0.759346 AAAGAGCCCACGTCACTTCT 59.241 50.000 0.00 0.00 0.00 2.85
354 355 1.629043 AAGAGCCCACGTCACTTCTA 58.371 50.000 0.00 0.00 0.00 2.10
355 356 1.853963 AGAGCCCACGTCACTTCTAT 58.146 50.000 0.00 0.00 0.00 1.98
356 357 1.751924 AGAGCCCACGTCACTTCTATC 59.248 52.381 0.00 0.00 0.00 2.08
357 358 1.751924 GAGCCCACGTCACTTCTATCT 59.248 52.381 0.00 0.00 0.00 1.98
358 359 2.950309 GAGCCCACGTCACTTCTATCTA 59.050 50.000 0.00 0.00 0.00 1.98
359 360 3.567397 AGCCCACGTCACTTCTATCTAT 58.433 45.455 0.00 0.00 0.00 1.98
360 361 3.570550 AGCCCACGTCACTTCTATCTATC 59.429 47.826 0.00 0.00 0.00 2.08
361 362 3.570550 GCCCACGTCACTTCTATCTATCT 59.429 47.826 0.00 0.00 0.00 1.98
362 363 4.760715 GCCCACGTCACTTCTATCTATCTA 59.239 45.833 0.00 0.00 0.00 1.98
363 364 5.241064 GCCCACGTCACTTCTATCTATCTAA 59.759 44.000 0.00 0.00 0.00 2.10
364 365 6.071840 GCCCACGTCACTTCTATCTATCTAAT 60.072 42.308 0.00 0.00 0.00 1.73
365 366 7.309177 CCCACGTCACTTCTATCTATCTAATG 58.691 42.308 0.00 0.00 0.00 1.90
366 367 7.309177 CCACGTCACTTCTATCTATCTAATGG 58.691 42.308 0.00 0.00 0.00 3.16
367 368 7.040340 CCACGTCACTTCTATCTATCTAATGGT 60.040 40.741 0.00 0.00 0.00 3.55
368 369 9.000486 CACGTCACTTCTATCTATCTAATGGTA 58.000 37.037 0.00 0.00 0.00 3.25
369 370 9.001542 ACGTCACTTCTATCTATCTAATGGTAC 57.998 37.037 0.00 0.00 0.00 3.34
370 371 8.452534 CGTCACTTCTATCTATCTAATGGTACC 58.547 40.741 4.43 4.43 0.00 3.34
371 372 8.452534 GTCACTTCTATCTATCTAATGGTACCG 58.547 40.741 7.57 0.00 0.00 4.02
372 373 8.380867 TCACTTCTATCTATCTAATGGTACCGA 58.619 37.037 7.57 0.00 0.00 4.69
373 374 9.179909 CACTTCTATCTATCTAATGGTACCGAT 57.820 37.037 7.57 6.34 0.00 4.18
374 375 9.756571 ACTTCTATCTATCTAATGGTACCGATT 57.243 33.333 7.57 10.57 0.00 3.34
377 378 9.339850 TCTATCTATCTAATGGTACCGATTAGC 57.660 37.037 24.69 0.00 34.60 3.09
378 379 6.770746 TCTATCTAATGGTACCGATTAGCC 57.229 41.667 24.69 0.00 34.60 3.93
379 380 4.820894 ATCTAATGGTACCGATTAGCCC 57.179 45.455 24.69 0.00 34.60 5.19
380 381 2.901839 TCTAATGGTACCGATTAGCCCC 59.098 50.000 24.69 0.00 34.60 5.80
381 382 1.513858 AATGGTACCGATTAGCCCCA 58.486 50.000 7.57 0.00 0.00 4.96
382 383 0.763035 ATGGTACCGATTAGCCCCAC 59.237 55.000 7.57 0.00 0.00 4.61
383 384 1.339644 TGGTACCGATTAGCCCCACC 61.340 60.000 7.57 0.00 0.00 4.61
384 385 1.052694 GGTACCGATTAGCCCCACCT 61.053 60.000 0.00 0.00 0.00 4.00
385 386 0.835276 GTACCGATTAGCCCCACCTT 59.165 55.000 0.00 0.00 0.00 3.50
386 387 1.125633 TACCGATTAGCCCCACCTTC 58.874 55.000 0.00 0.00 0.00 3.46
387 388 1.148498 CCGATTAGCCCCACCTTCC 59.852 63.158 0.00 0.00 0.00 3.46
388 389 1.345715 CCGATTAGCCCCACCTTCCT 61.346 60.000 0.00 0.00 0.00 3.36
389 390 0.546598 CGATTAGCCCCACCTTCCTT 59.453 55.000 0.00 0.00 0.00 3.36
390 391 1.475213 CGATTAGCCCCACCTTCCTTC 60.475 57.143 0.00 0.00 0.00 3.46
391 392 1.847088 GATTAGCCCCACCTTCCTTCT 59.153 52.381 0.00 0.00 0.00 2.85
392 393 1.755200 TTAGCCCCACCTTCCTTCTT 58.245 50.000 0.00 0.00 0.00 2.52
393 394 1.755200 TAGCCCCACCTTCCTTCTTT 58.245 50.000 0.00 0.00 0.00 2.52
394 395 1.755200 AGCCCCACCTTCCTTCTTTA 58.245 50.000 0.00 0.00 0.00 1.85
395 396 1.636003 AGCCCCACCTTCCTTCTTTAG 59.364 52.381 0.00 0.00 0.00 1.85
396 397 1.633945 GCCCCACCTTCCTTCTTTAGA 59.366 52.381 0.00 0.00 0.00 2.10
397 398 2.242452 GCCCCACCTTCCTTCTTTAGAT 59.758 50.000 0.00 0.00 0.00 1.98
398 399 3.458487 GCCCCACCTTCCTTCTTTAGATA 59.542 47.826 0.00 0.00 0.00 1.98
399 400 4.079958 GCCCCACCTTCCTTCTTTAGATAA 60.080 45.833 0.00 0.00 0.00 1.75
400 401 5.574948 GCCCCACCTTCCTTCTTTAGATAAA 60.575 44.000 0.00 0.00 0.00 1.40
401 402 6.490492 CCCCACCTTCCTTCTTTAGATAAAA 58.510 40.000 0.00 0.00 0.00 1.52
402 403 7.126061 CCCCACCTTCCTTCTTTAGATAAAAT 58.874 38.462 0.00 0.00 0.00 1.82
403 404 7.285629 CCCCACCTTCCTTCTTTAGATAAAATC 59.714 40.741 0.00 0.00 0.00 2.17
404 405 8.055790 CCCACCTTCCTTCTTTAGATAAAATCT 58.944 37.037 0.00 0.00 43.33 2.40
405 406 9.467796 CCACCTTCCTTCTTTAGATAAAATCTT 57.532 33.333 0.00 0.00 40.76 2.40
428 429 9.850628 TCTTATCGATTTAAATATACCCACGAG 57.149 33.333 1.71 0.00 0.00 4.18
429 430 9.635520 CTTATCGATTTAAATATACCCACGAGT 57.364 33.333 1.71 0.00 0.00 4.18
432 433 8.169977 TCGATTTAAATATACCCACGAGTAGT 57.830 34.615 0.00 0.00 0.00 2.73
433 434 8.292448 TCGATTTAAATATACCCACGAGTAGTC 58.708 37.037 0.00 0.00 0.00 2.59
434 435 8.295288 CGATTTAAATATACCCACGAGTAGTCT 58.705 37.037 0.00 0.00 0.00 3.24
435 436 9.408069 GATTTAAATATACCCACGAGTAGTCTG 57.592 37.037 0.00 0.00 0.00 3.51
436 437 5.786264 AAATATACCCACGAGTAGTCTGG 57.214 43.478 8.37 8.37 0.00 3.86
437 438 4.719026 ATATACCCACGAGTAGTCTGGA 57.281 45.455 14.28 0.93 0.00 3.86
438 439 2.414994 TACCCACGAGTAGTCTGGAG 57.585 55.000 14.28 8.95 0.00 3.86
439 440 0.697079 ACCCACGAGTAGTCTGGAGA 59.303 55.000 14.28 0.00 0.00 3.71
440 441 1.075050 ACCCACGAGTAGTCTGGAGAA 59.925 52.381 14.28 0.00 0.00 2.87
441 442 2.168496 CCCACGAGTAGTCTGGAGAAA 58.832 52.381 14.28 0.00 0.00 2.52
442 443 2.094649 CCCACGAGTAGTCTGGAGAAAC 60.095 54.545 14.28 0.00 0.00 2.78
443 444 2.557056 CCACGAGTAGTCTGGAGAAACA 59.443 50.000 9.32 0.00 0.00 2.83
444 445 3.005472 CCACGAGTAGTCTGGAGAAACAA 59.995 47.826 9.32 0.00 0.00 2.83
445 446 4.322049 CCACGAGTAGTCTGGAGAAACAAT 60.322 45.833 9.32 0.00 0.00 2.71
446 447 5.105877 CCACGAGTAGTCTGGAGAAACAATA 60.106 44.000 9.32 0.00 0.00 1.90
447 448 6.387465 CACGAGTAGTCTGGAGAAACAATAA 58.613 40.000 0.00 0.00 0.00 1.40
448 449 6.528423 CACGAGTAGTCTGGAGAAACAATAAG 59.472 42.308 0.00 0.00 0.00 1.73
449 450 6.433404 ACGAGTAGTCTGGAGAAACAATAAGA 59.567 38.462 0.00 0.00 0.00 2.10
450 451 6.970043 CGAGTAGTCTGGAGAAACAATAAGAG 59.030 42.308 0.00 0.00 0.00 2.85
451 452 7.148222 CGAGTAGTCTGGAGAAACAATAAGAGA 60.148 40.741 0.00 0.00 0.00 3.10
452 453 8.423906 AGTAGTCTGGAGAAACAATAAGAGAA 57.576 34.615 0.00 0.00 0.00 2.87
453 454 8.871125 AGTAGTCTGGAGAAACAATAAGAGAAA 58.129 33.333 0.00 0.00 0.00 2.52
454 455 9.145865 GTAGTCTGGAGAAACAATAAGAGAAAG 57.854 37.037 0.00 0.00 0.00 2.62
455 456 7.967908 AGTCTGGAGAAACAATAAGAGAAAGA 58.032 34.615 0.00 0.00 0.00 2.52
456 457 7.875554 AGTCTGGAGAAACAATAAGAGAAAGAC 59.124 37.037 0.00 0.00 0.00 3.01
457 458 7.118535 GTCTGGAGAAACAATAAGAGAAAGACC 59.881 40.741 0.00 0.00 0.00 3.85
458 459 6.837312 TGGAGAAACAATAAGAGAAAGACCA 58.163 36.000 0.00 0.00 0.00 4.02
459 460 7.287061 TGGAGAAACAATAAGAGAAAGACCAA 58.713 34.615 0.00 0.00 0.00 3.67
460 461 7.777910 TGGAGAAACAATAAGAGAAAGACCAAA 59.222 33.333 0.00 0.00 0.00 3.28
461 462 8.797438 GGAGAAACAATAAGAGAAAGACCAAAT 58.203 33.333 0.00 0.00 0.00 2.32
472 473 9.853177 AAGAGAAAGACCAAATAAAGAAGAAGA 57.147 29.630 0.00 0.00 0.00 2.87
475 476 8.518702 AGAAAGACCAAATAAAGAAGAAGATGC 58.481 33.333 0.00 0.00 0.00 3.91
476 477 7.765695 AAGACCAAATAAAGAAGAAGATGCA 57.234 32.000 0.00 0.00 0.00 3.96
477 478 7.951347 AGACCAAATAAAGAAGAAGATGCAT 57.049 32.000 0.00 0.00 0.00 3.96
478 479 9.466497 AAGACCAAATAAAGAAGAAGATGCATA 57.534 29.630 0.00 0.00 0.00 3.14
479 480 8.897752 AGACCAAATAAAGAAGAAGATGCATAC 58.102 33.333 0.00 0.00 0.00 2.39
480 481 8.579850 ACCAAATAAAGAAGAAGATGCATACA 57.420 30.769 0.00 0.00 0.00 2.29
481 482 8.462016 ACCAAATAAAGAAGAAGATGCATACAC 58.538 33.333 0.00 0.00 0.00 2.90
482 483 7.641411 CCAAATAAAGAAGAAGATGCATACACG 59.359 37.037 0.00 0.00 0.00 4.49
483 484 4.606457 AAAGAAGAAGATGCATACACGC 57.394 40.909 0.00 0.00 0.00 5.34
484 485 3.533606 AGAAGAAGATGCATACACGCT 57.466 42.857 0.00 0.00 0.00 5.07
485 486 3.866651 AGAAGAAGATGCATACACGCTT 58.133 40.909 0.00 0.00 0.00 4.68
486 487 3.620374 AGAAGAAGATGCATACACGCTTG 59.380 43.478 0.00 0.00 0.00 4.01
487 488 2.977914 AGAAGATGCATACACGCTTGT 58.022 42.857 0.00 0.05 40.02 3.16
488 489 3.338249 AGAAGATGCATACACGCTTGTT 58.662 40.909 0.00 0.00 37.15 2.83
489 490 3.125829 AGAAGATGCATACACGCTTGTTG 59.874 43.478 0.00 1.43 37.15 3.33
490 491 1.739466 AGATGCATACACGCTTGTTGG 59.261 47.619 0.00 0.00 37.15 3.77
491 492 0.171007 ATGCATACACGCTTGTTGGC 59.829 50.000 0.00 6.56 37.15 4.52
492 493 0.888736 TGCATACACGCTTGTTGGCT 60.889 50.000 16.17 0.00 37.15 4.75
493 494 0.454957 GCATACACGCTTGTTGGCTG 60.455 55.000 0.00 0.00 37.15 4.85
494 495 0.168788 CATACACGCTTGTTGGCTGG 59.831 55.000 0.00 0.00 37.15 4.85
495 496 0.036164 ATACACGCTTGTTGGCTGGA 59.964 50.000 0.00 0.00 37.15 3.86
496 497 0.602638 TACACGCTTGTTGGCTGGAG 60.603 55.000 0.00 0.00 37.15 3.86
497 498 2.281761 ACGCTTGTTGGCTGGAGG 60.282 61.111 0.00 0.00 0.00 4.30
498 499 2.032528 CGCTTGTTGGCTGGAGGA 59.967 61.111 0.00 0.00 0.00 3.71
499 500 1.377725 CGCTTGTTGGCTGGAGGAT 60.378 57.895 0.00 0.00 0.00 3.24
500 501 1.651240 CGCTTGTTGGCTGGAGGATG 61.651 60.000 0.00 0.00 0.00 3.51
501 502 1.318158 GCTTGTTGGCTGGAGGATGG 61.318 60.000 0.00 0.00 0.00 3.51
502 503 0.329261 CTTGTTGGCTGGAGGATGGA 59.671 55.000 0.00 0.00 0.00 3.41
503 504 0.329261 TTGTTGGCTGGAGGATGGAG 59.671 55.000 0.00 0.00 0.00 3.86
504 505 1.225704 GTTGGCTGGAGGATGGAGG 59.774 63.158 0.00 0.00 0.00 4.30
505 506 1.082766 TTGGCTGGAGGATGGAGGA 59.917 57.895 0.00 0.00 0.00 3.71
506 507 0.327867 TTGGCTGGAGGATGGAGGAT 60.328 55.000 0.00 0.00 0.00 3.24
507 508 0.567687 TGGCTGGAGGATGGAGGATA 59.432 55.000 0.00 0.00 0.00 2.59
508 509 1.274712 GGCTGGAGGATGGAGGATAG 58.725 60.000 0.00 0.00 0.00 2.08
509 510 1.203237 GGCTGGAGGATGGAGGATAGA 60.203 57.143 0.00 0.00 0.00 1.98
510 511 2.178580 GCTGGAGGATGGAGGATAGAG 58.821 57.143 0.00 0.00 0.00 2.43
511 512 2.225242 GCTGGAGGATGGAGGATAGAGA 60.225 54.545 0.00 0.00 0.00 3.10
512 513 3.700538 CTGGAGGATGGAGGATAGAGAG 58.299 54.545 0.00 0.00 0.00 3.20
513 514 3.333381 CTGGAGGATGGAGGATAGAGAGA 59.667 52.174 0.00 0.00 0.00 3.10
514 515 3.333381 TGGAGGATGGAGGATAGAGAGAG 59.667 52.174 0.00 0.00 0.00 3.20
515 516 3.309121 GGAGGATGGAGGATAGAGAGAGG 60.309 56.522 0.00 0.00 0.00 3.69
516 517 2.654385 AGGATGGAGGATAGAGAGAGGG 59.346 54.545 0.00 0.00 0.00 4.30
517 518 2.652348 GGATGGAGGATAGAGAGAGGGA 59.348 54.545 0.00 0.00 0.00 4.20
518 519 3.309121 GGATGGAGGATAGAGAGAGGGAG 60.309 56.522 0.00 0.00 0.00 4.30
519 520 3.082116 TGGAGGATAGAGAGAGGGAGA 57.918 52.381 0.00 0.00 0.00 3.71
520 521 3.619085 TGGAGGATAGAGAGAGGGAGAT 58.381 50.000 0.00 0.00 0.00 2.75
521 522 3.333381 TGGAGGATAGAGAGAGGGAGATG 59.667 52.174 0.00 0.00 0.00 2.90
522 523 3.356290 GAGGATAGAGAGAGGGAGATGC 58.644 54.545 0.00 0.00 0.00 3.91
523 524 2.721355 AGGATAGAGAGAGGGAGATGCA 59.279 50.000 0.00 0.00 0.00 3.96
524 525 3.337605 AGGATAGAGAGAGGGAGATGCAT 59.662 47.826 0.00 0.00 0.00 3.96
525 526 3.448301 GGATAGAGAGAGGGAGATGCATG 59.552 52.174 2.46 0.00 0.00 4.06
526 527 2.475339 AGAGAGAGGGAGATGCATGT 57.525 50.000 2.46 0.00 0.00 3.21
527 528 3.609256 AGAGAGAGGGAGATGCATGTA 57.391 47.619 2.46 0.00 0.00 2.29
528 529 3.230134 AGAGAGAGGGAGATGCATGTAC 58.770 50.000 2.46 0.00 0.00 2.90
529 530 1.959985 AGAGAGGGAGATGCATGTACG 59.040 52.381 2.46 0.00 0.00 3.67
530 531 1.000283 GAGAGGGAGATGCATGTACGG 60.000 57.143 2.46 0.00 0.00 4.02
531 532 0.753262 GAGGGAGATGCATGTACGGT 59.247 55.000 2.46 0.00 0.00 4.83
532 533 1.139058 GAGGGAGATGCATGTACGGTT 59.861 52.381 2.46 0.00 0.00 4.44
533 534 1.134401 AGGGAGATGCATGTACGGTTG 60.134 52.381 2.46 0.00 0.00 3.77
534 535 1.299541 GGAGATGCATGTACGGTTGG 58.700 55.000 2.46 0.00 0.00 3.77
535 536 0.657840 GAGATGCATGTACGGTTGGC 59.342 55.000 2.46 0.00 0.00 4.52
536 537 0.253044 AGATGCATGTACGGTTGGCT 59.747 50.000 2.46 0.00 0.00 4.75
537 538 0.378257 GATGCATGTACGGTTGGCTG 59.622 55.000 2.46 0.00 0.00 4.85
538 539 1.031571 ATGCATGTACGGTTGGCTGG 61.032 55.000 0.00 0.00 0.00 4.85
539 540 1.376683 GCATGTACGGTTGGCTGGA 60.377 57.895 0.00 0.00 0.00 3.86
540 541 0.958382 GCATGTACGGTTGGCTGGAA 60.958 55.000 0.00 0.00 0.00 3.53
541 542 1.086696 CATGTACGGTTGGCTGGAAG 58.913 55.000 0.00 0.00 0.00 3.46
542 543 0.035439 ATGTACGGTTGGCTGGAAGG 60.035 55.000 0.00 0.00 0.00 3.46
543 544 1.122632 TGTACGGTTGGCTGGAAGGA 61.123 55.000 0.00 0.00 0.00 3.36
544 545 0.035739 GTACGGTTGGCTGGAAGGAA 59.964 55.000 0.00 0.00 0.00 3.36
545 546 0.988832 TACGGTTGGCTGGAAGGAAT 59.011 50.000 0.00 0.00 0.00 3.01
546 547 0.988832 ACGGTTGGCTGGAAGGAATA 59.011 50.000 0.00 0.00 0.00 1.75
547 548 1.353022 ACGGTTGGCTGGAAGGAATAA 59.647 47.619 0.00 0.00 0.00 1.40
548 549 2.224917 ACGGTTGGCTGGAAGGAATAAA 60.225 45.455 0.00 0.00 0.00 1.40
549 550 2.423538 CGGTTGGCTGGAAGGAATAAAG 59.576 50.000 0.00 0.00 0.00 1.85
550 551 2.166459 GGTTGGCTGGAAGGAATAAAGC 59.834 50.000 0.00 0.00 0.00 3.51
551 552 3.092301 GTTGGCTGGAAGGAATAAAGCT 58.908 45.455 0.00 0.00 34.29 3.74
552 553 3.004752 TGGCTGGAAGGAATAAAGCTC 57.995 47.619 0.00 0.00 34.29 4.09
553 554 2.308570 TGGCTGGAAGGAATAAAGCTCA 59.691 45.455 0.00 0.00 34.29 4.26
554 555 2.685388 GGCTGGAAGGAATAAAGCTCAC 59.315 50.000 0.00 0.00 34.29 3.51
555 556 2.685388 GCTGGAAGGAATAAAGCTCACC 59.315 50.000 0.00 0.00 0.00 4.02
556 557 3.623453 GCTGGAAGGAATAAAGCTCACCT 60.623 47.826 0.00 0.00 0.00 4.00
557 558 4.593956 CTGGAAGGAATAAAGCTCACCTT 58.406 43.478 0.00 0.00 42.57 3.50
558 559 4.335416 TGGAAGGAATAAAGCTCACCTTG 58.665 43.478 12.27 0.00 40.42 3.61
559 560 3.129462 GGAAGGAATAAAGCTCACCTTGC 59.871 47.826 12.27 11.53 40.42 4.01
560 561 2.728007 AGGAATAAAGCTCACCTTGCC 58.272 47.619 0.00 0.00 33.01 4.52
561 562 2.310052 AGGAATAAAGCTCACCTTGCCT 59.690 45.455 0.00 0.00 33.01 4.75
562 563 3.523564 AGGAATAAAGCTCACCTTGCCTA 59.476 43.478 0.00 0.00 33.01 3.93
568 569 5.904362 AAAGCTCACCTTGCCTAAATAAG 57.096 39.130 0.00 0.00 33.01 1.73
569 570 4.706962 AAAGCTCACCTTGCCTAAATAAGG 59.293 41.667 0.00 0.00 46.99 2.69
1411 1413 4.277174 GCACTGACAGAGAGCTAGCTATTA 59.723 45.833 19.38 0.00 35.53 0.98
2271 2274 4.718276 TGGGTAGGGAAAGAAGGTATACAC 59.282 45.833 5.01 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.522804 AAGCAATTTCTTACGTACAATGAAAAA 57.477 25.926 12.80 1.68 31.71 1.94
47 48 9.176181 GAAGCAATTTCTTACGTACAATGAAAA 57.824 29.630 12.80 2.72 32.83 2.29
48 49 8.346300 TGAAGCAATTTCTTACGTACAATGAAA 58.654 29.630 0.00 4.90 36.71 2.69
49 50 7.866729 TGAAGCAATTTCTTACGTACAATGAA 58.133 30.769 0.00 0.00 36.71 2.57
50 51 7.428282 TGAAGCAATTTCTTACGTACAATGA 57.572 32.000 0.00 0.00 36.71 2.57
51 52 8.417176 GTTTGAAGCAATTTCTTACGTACAATG 58.583 33.333 0.00 0.00 36.71 2.82
52 53 7.593644 GGTTTGAAGCAATTTCTTACGTACAAT 59.406 33.333 0.00 0.00 36.71 2.71
53 54 6.913673 GGTTTGAAGCAATTTCTTACGTACAA 59.086 34.615 0.00 0.00 36.71 2.41
54 55 6.038382 TGGTTTGAAGCAATTTCTTACGTACA 59.962 34.615 0.00 0.00 36.71 2.90
55 56 6.432107 TGGTTTGAAGCAATTTCTTACGTAC 58.568 36.000 0.00 0.00 36.71 3.67
56 57 6.621316 TGGTTTGAAGCAATTTCTTACGTA 57.379 33.333 0.00 0.00 36.71 3.57
57 58 5.508200 TGGTTTGAAGCAATTTCTTACGT 57.492 34.783 0.00 0.00 36.71 3.57
58 59 6.820470 TTTGGTTTGAAGCAATTTCTTACG 57.180 33.333 8.92 0.00 44.73 3.18
84 85 9.301897 GAGTCCTCATAAGCCCATTTATTTTAT 57.698 33.333 0.00 0.00 0.00 1.40
85 86 7.444183 CGAGTCCTCATAAGCCCATTTATTTTA 59.556 37.037 0.00 0.00 0.00 1.52
86 87 6.263168 CGAGTCCTCATAAGCCCATTTATTTT 59.737 38.462 0.00 0.00 0.00 1.82
87 88 5.765182 CGAGTCCTCATAAGCCCATTTATTT 59.235 40.000 0.00 0.00 0.00 1.40
88 89 5.071788 TCGAGTCCTCATAAGCCCATTTATT 59.928 40.000 0.00 0.00 0.00 1.40
89 90 4.593206 TCGAGTCCTCATAAGCCCATTTAT 59.407 41.667 0.00 0.00 0.00 1.40
90 91 3.964688 TCGAGTCCTCATAAGCCCATTTA 59.035 43.478 0.00 0.00 0.00 1.40
91 92 2.771943 TCGAGTCCTCATAAGCCCATTT 59.228 45.455 0.00 0.00 0.00 2.32
92 93 2.398588 TCGAGTCCTCATAAGCCCATT 58.601 47.619 0.00 0.00 0.00 3.16
93 94 2.088104 TCGAGTCCTCATAAGCCCAT 57.912 50.000 0.00 0.00 0.00 4.00
94 95 1.480954 GTTCGAGTCCTCATAAGCCCA 59.519 52.381 0.00 0.00 0.00 5.36
95 96 1.757699 AGTTCGAGTCCTCATAAGCCC 59.242 52.381 0.00 0.00 0.00 5.19
96 97 2.223852 GGAGTTCGAGTCCTCATAAGCC 60.224 54.545 8.34 0.00 34.81 4.35
97 98 2.427453 TGGAGTTCGAGTCCTCATAAGC 59.573 50.000 14.99 0.00 38.55 3.09
98 99 3.181485 GGTGGAGTTCGAGTCCTCATAAG 60.181 52.174 14.99 0.00 38.55 1.73
99 100 2.758979 GGTGGAGTTCGAGTCCTCATAA 59.241 50.000 14.99 0.00 38.55 1.90
100 101 2.376109 GGTGGAGTTCGAGTCCTCATA 58.624 52.381 14.99 0.97 38.55 2.15
101 102 1.187087 GGTGGAGTTCGAGTCCTCAT 58.813 55.000 14.99 0.00 38.55 2.90
102 103 0.898789 GGGTGGAGTTCGAGTCCTCA 60.899 60.000 14.99 0.00 38.55 3.86
103 104 1.891616 GGGTGGAGTTCGAGTCCTC 59.108 63.158 14.99 11.77 38.55 3.71
104 105 1.977544 CGGGTGGAGTTCGAGTCCT 60.978 63.158 14.99 0.00 38.55 3.85
105 106 2.572284 CGGGTGGAGTTCGAGTCC 59.428 66.667 8.61 8.61 38.22 3.85
106 107 2.126031 GCGGGTGGAGTTCGAGTC 60.126 66.667 0.00 0.00 0.00 3.36
107 108 0.896940 TAAGCGGGTGGAGTTCGAGT 60.897 55.000 0.00 0.00 0.00 4.18
108 109 0.179134 CTAAGCGGGTGGAGTTCGAG 60.179 60.000 0.00 0.00 0.00 4.04
109 110 0.896940 ACTAAGCGGGTGGAGTTCGA 60.897 55.000 0.00 0.00 0.00 3.71
110 111 0.037605 AACTAAGCGGGTGGAGTTCG 60.038 55.000 2.82 0.00 0.00 3.95
111 112 1.804748 CAAACTAAGCGGGTGGAGTTC 59.195 52.381 7.85 0.00 30.98 3.01
112 113 1.418637 TCAAACTAAGCGGGTGGAGTT 59.581 47.619 2.82 2.82 33.60 3.01
113 114 1.002087 CTCAAACTAAGCGGGTGGAGT 59.998 52.381 0.00 0.00 0.00 3.85
114 115 1.726853 CTCAAACTAAGCGGGTGGAG 58.273 55.000 0.00 0.00 0.00 3.86
115 116 0.321298 GCTCAAACTAAGCGGGTGGA 60.321 55.000 0.00 0.00 0.00 4.02
116 117 1.305930 GGCTCAAACTAAGCGGGTGG 61.306 60.000 0.00 0.00 40.77 4.61
117 118 1.305930 GGGCTCAAACTAAGCGGGTG 61.306 60.000 0.00 0.00 40.77 4.61
118 119 1.002502 GGGCTCAAACTAAGCGGGT 60.003 57.895 0.00 0.00 40.77 5.28
119 120 2.106683 CGGGCTCAAACTAAGCGGG 61.107 63.158 0.00 0.00 40.77 6.13
120 121 1.375523 ACGGGCTCAAACTAAGCGG 60.376 57.895 0.00 0.00 40.77 5.52
121 122 1.787847 CACGGGCTCAAACTAAGCG 59.212 57.895 0.00 0.00 40.77 4.68
122 123 1.502190 GCACGGGCTCAAACTAAGC 59.498 57.895 0.00 0.00 39.09 3.09
123 124 1.787847 CGCACGGGCTCAAACTAAG 59.212 57.895 8.62 0.00 38.10 2.18
124 125 2.322081 GCGCACGGGCTCAAACTAA 61.322 57.895 8.62 0.00 38.10 2.24
125 126 2.740826 GCGCACGGGCTCAAACTA 60.741 61.111 8.62 0.00 38.10 2.24
126 127 4.927782 TGCGCACGGGCTCAAACT 62.928 61.111 5.66 0.00 38.10 2.66
127 128 4.683334 GTGCGCACGGGCTCAAAC 62.683 66.667 26.77 0.00 36.34 2.93
131 132 4.683334 GTTTGTGCGCACGGGCTC 62.683 66.667 33.22 18.23 38.10 4.70
134 135 4.326766 CTGGTTTGTGCGCACGGG 62.327 66.667 33.22 16.00 0.00 5.28
135 136 4.326766 CCTGGTTTGTGCGCACGG 62.327 66.667 33.22 23.40 0.00 4.94
136 137 4.980903 GCCTGGTTTGTGCGCACG 62.981 66.667 33.22 19.06 0.00 5.34
137 138 4.645921 GGCCTGGTTTGTGCGCAC 62.646 66.667 33.11 33.11 0.00 5.34
139 140 4.645921 GTGGCCTGGTTTGTGCGC 62.646 66.667 3.32 0.00 0.00 6.09
140 141 3.977244 GGTGGCCTGGTTTGTGCG 61.977 66.667 3.32 0.00 0.00 5.34
141 142 0.611896 ATAGGTGGCCTGGTTTGTGC 60.612 55.000 3.32 0.00 34.61 4.57
142 143 2.643551 CTATAGGTGGCCTGGTTTGTG 58.356 52.381 3.32 0.00 34.61 3.33
143 144 1.064685 GCTATAGGTGGCCTGGTTTGT 60.065 52.381 3.32 0.00 34.61 2.83
144 145 1.212935 AGCTATAGGTGGCCTGGTTTG 59.787 52.381 3.32 0.00 34.61 2.93
145 146 1.596496 AGCTATAGGTGGCCTGGTTT 58.404 50.000 3.32 0.00 34.61 3.27
146 147 2.438392 GTTAGCTATAGGTGGCCTGGTT 59.562 50.000 14.72 0.00 34.61 3.67
147 148 2.047830 GTTAGCTATAGGTGGCCTGGT 58.952 52.381 14.72 0.00 34.61 4.00
148 149 2.330216 AGTTAGCTATAGGTGGCCTGG 58.670 52.381 14.72 0.00 34.61 4.45
149 150 5.012148 ACAATAGTTAGCTATAGGTGGCCTG 59.988 44.000 14.72 6.82 36.95 4.85
150 151 5.155905 ACAATAGTTAGCTATAGGTGGCCT 58.844 41.667 14.72 9.31 36.95 5.19
151 152 5.485209 ACAATAGTTAGCTATAGGTGGCC 57.515 43.478 14.72 0.00 36.95 5.36
152 153 5.701290 CCAACAATAGTTAGCTATAGGTGGC 59.299 44.000 14.72 7.03 36.95 5.01
153 154 5.701290 GCCAACAATAGTTAGCTATAGGTGG 59.299 44.000 14.72 13.60 38.97 4.61
154 155 6.288294 TGCCAACAATAGTTAGCTATAGGTG 58.712 40.000 14.72 0.00 41.95 4.00
155 156 6.494666 TGCCAACAATAGTTAGCTATAGGT 57.505 37.500 9.78 9.78 41.95 3.08
156 157 7.880195 AGAATGCCAACAATAGTTAGCTATAGG 59.120 37.037 1.04 2.15 41.95 2.57
157 158 8.839310 AGAATGCCAACAATAGTTAGCTATAG 57.161 34.615 0.00 0.00 41.95 1.31
158 159 8.651389 AGAGAATGCCAACAATAGTTAGCTATA 58.349 33.333 0.00 0.00 41.95 1.31
159 160 7.512992 AGAGAATGCCAACAATAGTTAGCTAT 58.487 34.615 0.00 0.00 41.95 2.97
160 161 6.889198 AGAGAATGCCAACAATAGTTAGCTA 58.111 36.000 0.00 0.00 41.95 3.32
161 162 5.749462 AGAGAATGCCAACAATAGTTAGCT 58.251 37.500 0.00 0.00 41.95 3.32
162 163 6.442513 AAGAGAATGCCAACAATAGTTAGC 57.557 37.500 0.00 0.00 41.81 3.09
163 164 7.274250 GCAAAAGAGAATGCCAACAATAGTTAG 59.726 37.037 0.00 0.00 34.78 2.34
164 165 7.039784 AGCAAAAGAGAATGCCAACAATAGTTA 60.040 33.333 0.00 0.00 43.57 2.24
165 166 5.928264 GCAAAAGAGAATGCCAACAATAGTT 59.072 36.000 0.00 0.00 36.56 2.24
166 167 5.244626 AGCAAAAGAGAATGCCAACAATAGT 59.755 36.000 0.00 0.00 43.57 2.12
167 168 5.575606 CAGCAAAAGAGAATGCCAACAATAG 59.424 40.000 0.00 0.00 43.57 1.73
168 169 5.472148 CAGCAAAAGAGAATGCCAACAATA 58.528 37.500 0.00 0.00 43.57 1.90
169 170 4.312443 CAGCAAAAGAGAATGCCAACAAT 58.688 39.130 0.00 0.00 43.57 2.71
170 171 3.719924 CAGCAAAAGAGAATGCCAACAA 58.280 40.909 0.00 0.00 43.57 2.83
171 172 2.546373 GCAGCAAAAGAGAATGCCAACA 60.546 45.455 0.00 0.00 43.57 3.33
172 173 2.064014 GCAGCAAAAGAGAATGCCAAC 58.936 47.619 0.00 0.00 43.57 3.77
173 174 2.443887 GCAGCAAAAGAGAATGCCAA 57.556 45.000 0.00 0.00 43.57 4.52
176 177 1.706443 GTGGCAGCAAAAGAGAATGC 58.294 50.000 0.00 0.00 42.87 3.56
177 178 1.973138 CGTGGCAGCAAAAGAGAATG 58.027 50.000 0.00 0.00 0.00 2.67
178 179 0.242017 GCGTGGCAGCAAAAGAGAAT 59.758 50.000 0.00 0.00 37.05 2.40
179 180 0.819259 AGCGTGGCAGCAAAAGAGAA 60.819 50.000 10.71 0.00 40.15 2.87
180 181 1.227943 AGCGTGGCAGCAAAAGAGA 60.228 52.632 10.71 0.00 40.15 3.10
181 182 1.081641 CAGCGTGGCAGCAAAAGAG 60.082 57.895 10.71 0.00 40.15 2.85
182 183 2.554636 CCAGCGTGGCAGCAAAAGA 61.555 57.895 10.71 0.00 40.15 2.52
183 184 2.049802 CCAGCGTGGCAGCAAAAG 60.050 61.111 10.71 0.00 40.15 2.27
184 185 2.832661 ACCAGCGTGGCAGCAAAA 60.833 55.556 10.71 0.00 42.67 2.44
185 186 3.594775 CACCAGCGTGGCAGCAAA 61.595 61.111 10.71 0.00 42.67 3.68
186 187 4.873810 ACACCAGCGTGGCAGCAA 62.874 61.111 10.71 0.00 44.86 3.91
187 188 4.873810 AACACCAGCGTGGCAGCA 62.874 61.111 10.71 0.00 44.86 4.41
188 189 4.030452 GAACACCAGCGTGGCAGC 62.030 66.667 4.23 0.00 44.86 5.25
189 190 3.716006 CGAACACCAGCGTGGCAG 61.716 66.667 4.23 1.08 44.86 4.85
193 194 3.027170 GATGCCGAACACCAGCGTG 62.027 63.158 0.00 0.00 46.11 5.34
194 195 2.742372 GATGCCGAACACCAGCGT 60.742 61.111 0.00 0.00 0.00 5.07
195 196 2.741985 TGATGCCGAACACCAGCG 60.742 61.111 0.00 0.00 0.00 5.18
196 197 1.915614 CTGTGATGCCGAACACCAGC 61.916 60.000 0.00 0.00 36.35 4.85
197 198 0.320683 TCTGTGATGCCGAACACCAG 60.321 55.000 0.00 0.00 36.35 4.00
198 199 0.107643 TTCTGTGATGCCGAACACCA 59.892 50.000 0.00 0.00 36.35 4.17
199 200 1.234821 TTTCTGTGATGCCGAACACC 58.765 50.000 0.00 0.00 36.35 4.16
200 201 3.042887 GTTTTTCTGTGATGCCGAACAC 58.957 45.455 0.00 0.00 37.51 3.32
201 202 2.685388 TGTTTTTCTGTGATGCCGAACA 59.315 40.909 0.00 0.00 0.00 3.18
202 203 3.003275 TCTGTTTTTCTGTGATGCCGAAC 59.997 43.478 0.00 0.00 0.00 3.95
203 204 3.210227 TCTGTTTTTCTGTGATGCCGAA 58.790 40.909 0.00 0.00 0.00 4.30
204 205 2.844946 TCTGTTTTTCTGTGATGCCGA 58.155 42.857 0.00 0.00 0.00 5.54
205 206 3.624326 TTCTGTTTTTCTGTGATGCCG 57.376 42.857 0.00 0.00 0.00 5.69
206 207 6.849588 ATTTTTCTGTTTTTCTGTGATGCC 57.150 33.333 0.00 0.00 0.00 4.40
219 220 8.932791 CCGTCACTAACACTATATTTTTCTGTT 58.067 33.333 0.00 0.00 0.00 3.16
220 221 8.092687 ACCGTCACTAACACTATATTTTTCTGT 58.907 33.333 0.00 0.00 0.00 3.41
221 222 8.475331 ACCGTCACTAACACTATATTTTTCTG 57.525 34.615 0.00 0.00 0.00 3.02
222 223 9.148104 GAACCGTCACTAACACTATATTTTTCT 57.852 33.333 0.00 0.00 0.00 2.52
223 224 8.928733 TGAACCGTCACTAACACTATATTTTTC 58.071 33.333 0.00 0.00 0.00 2.29
224 225 8.836268 TGAACCGTCACTAACACTATATTTTT 57.164 30.769 0.00 0.00 0.00 1.94
225 226 8.836268 TTGAACCGTCACTAACACTATATTTT 57.164 30.769 0.00 0.00 31.90 1.82
226 227 8.715088 GTTTGAACCGTCACTAACACTATATTT 58.285 33.333 0.00 0.00 31.90 1.40
227 228 8.092687 AGTTTGAACCGTCACTAACACTATATT 58.907 33.333 0.00 0.00 31.90 1.28
228 229 7.609056 AGTTTGAACCGTCACTAACACTATAT 58.391 34.615 0.00 0.00 31.90 0.86
229 230 6.985117 AGTTTGAACCGTCACTAACACTATA 58.015 36.000 0.00 0.00 31.90 1.31
230 231 5.850614 AGTTTGAACCGTCACTAACACTAT 58.149 37.500 0.00 0.00 31.90 2.12
231 232 5.068198 AGAGTTTGAACCGTCACTAACACTA 59.932 40.000 0.00 0.00 29.18 2.74
232 233 4.117685 GAGTTTGAACCGTCACTAACACT 58.882 43.478 0.00 0.00 31.90 3.55
233 234 4.025979 CAGAGTTTGAACCGTCACTAACAC 60.026 45.833 0.00 0.00 31.90 3.32
234 235 4.116961 CAGAGTTTGAACCGTCACTAACA 58.883 43.478 0.00 0.00 31.90 2.41
235 236 3.493503 CCAGAGTTTGAACCGTCACTAAC 59.506 47.826 0.00 0.00 31.90 2.34
236 237 3.385433 TCCAGAGTTTGAACCGTCACTAA 59.615 43.478 0.00 0.00 31.90 2.24
237 238 2.960384 TCCAGAGTTTGAACCGTCACTA 59.040 45.455 0.00 0.00 31.90 2.74
238 239 1.760613 TCCAGAGTTTGAACCGTCACT 59.239 47.619 0.00 0.00 31.90 3.41
239 240 1.865340 GTCCAGAGTTTGAACCGTCAC 59.135 52.381 0.00 0.00 31.90 3.67
240 241 1.202604 GGTCCAGAGTTTGAACCGTCA 60.203 52.381 0.00 0.00 0.00 4.35
241 242 1.202604 TGGTCCAGAGTTTGAACCGTC 60.203 52.381 0.00 0.00 0.00 4.79
242 243 0.834612 TGGTCCAGAGTTTGAACCGT 59.165 50.000 0.00 0.00 0.00 4.83
243 244 1.512926 CTGGTCCAGAGTTTGAACCG 58.487 55.000 14.26 0.00 32.44 4.44
244 245 1.239347 GCTGGTCCAGAGTTTGAACC 58.761 55.000 23.77 0.00 32.44 3.62
245 246 1.604278 GTGCTGGTCCAGAGTTTGAAC 59.396 52.381 23.77 2.48 32.44 3.18
246 247 1.476833 GGTGCTGGTCCAGAGTTTGAA 60.477 52.381 23.77 0.00 32.44 2.69
247 248 0.108585 GGTGCTGGTCCAGAGTTTGA 59.891 55.000 23.77 0.00 32.44 2.69
248 249 0.890996 GGGTGCTGGTCCAGAGTTTG 60.891 60.000 23.77 0.00 32.44 2.93
249 250 1.062488 AGGGTGCTGGTCCAGAGTTT 61.062 55.000 23.77 0.36 32.44 2.66
250 251 0.178903 TAGGGTGCTGGTCCAGAGTT 60.179 55.000 23.77 5.19 32.44 3.01
251 252 0.905337 GTAGGGTGCTGGTCCAGAGT 60.905 60.000 23.77 3.79 32.44 3.24
252 253 1.617947 GGTAGGGTGCTGGTCCAGAG 61.618 65.000 23.77 0.00 32.44 3.35
253 254 1.612442 GGTAGGGTGCTGGTCCAGA 60.612 63.158 23.77 5.01 32.44 3.86
254 255 1.274703 ATGGTAGGGTGCTGGTCCAG 61.275 60.000 15.15 15.15 34.12 3.86
255 256 1.229820 ATGGTAGGGTGCTGGTCCA 60.230 57.895 0.00 0.00 0.00 4.02
256 257 1.271840 TGATGGTAGGGTGCTGGTCC 61.272 60.000 0.00 0.00 0.00 4.46
257 258 0.618458 TTGATGGTAGGGTGCTGGTC 59.382 55.000 0.00 0.00 0.00 4.02
258 259 1.072266 TTTGATGGTAGGGTGCTGGT 58.928 50.000 0.00 0.00 0.00 4.00
259 260 2.214376 TTTTGATGGTAGGGTGCTGG 57.786 50.000 0.00 0.00 0.00 4.85
260 261 3.191371 GTCTTTTTGATGGTAGGGTGCTG 59.809 47.826 0.00 0.00 0.00 4.41
261 262 3.181434 TGTCTTTTTGATGGTAGGGTGCT 60.181 43.478 0.00 0.00 0.00 4.40
262 263 3.057526 GTGTCTTTTTGATGGTAGGGTGC 60.058 47.826 0.00 0.00 0.00 5.01
263 264 4.141287 TGTGTCTTTTTGATGGTAGGGTG 58.859 43.478 0.00 0.00 0.00 4.61
264 265 4.447138 TGTGTCTTTTTGATGGTAGGGT 57.553 40.909 0.00 0.00 0.00 4.34
265 266 4.827284 AGTTGTGTCTTTTTGATGGTAGGG 59.173 41.667 0.00 0.00 0.00 3.53
266 267 7.504924 TTAGTTGTGTCTTTTTGATGGTAGG 57.495 36.000 0.00 0.00 0.00 3.18
267 268 7.041098 AGCTTAGTTGTGTCTTTTTGATGGTAG 60.041 37.037 0.00 0.00 0.00 3.18
268 269 6.770785 AGCTTAGTTGTGTCTTTTTGATGGTA 59.229 34.615 0.00 0.00 0.00 3.25
269 270 5.594317 AGCTTAGTTGTGTCTTTTTGATGGT 59.406 36.000 0.00 0.00 0.00 3.55
270 271 5.916883 CAGCTTAGTTGTGTCTTTTTGATGG 59.083 40.000 0.00 0.00 0.00 3.51
271 272 5.916883 CCAGCTTAGTTGTGTCTTTTTGATG 59.083 40.000 0.00 0.00 0.00 3.07
272 273 5.594317 ACCAGCTTAGTTGTGTCTTTTTGAT 59.406 36.000 0.00 0.00 0.00 2.57
273 274 4.947388 ACCAGCTTAGTTGTGTCTTTTTGA 59.053 37.500 0.00 0.00 0.00 2.69
274 275 5.248870 ACCAGCTTAGTTGTGTCTTTTTG 57.751 39.130 0.00 0.00 0.00 2.44
275 276 5.914898 AACCAGCTTAGTTGTGTCTTTTT 57.085 34.783 0.00 0.00 0.00 1.94
276 277 7.582667 AATAACCAGCTTAGTTGTGTCTTTT 57.417 32.000 8.80 0.00 0.00 2.27
277 278 7.937394 ACTAATAACCAGCTTAGTTGTGTCTTT 59.063 33.333 8.80 0.00 35.22 2.52
278 279 7.450903 ACTAATAACCAGCTTAGTTGTGTCTT 58.549 34.615 8.80 0.00 35.22 3.01
279 280 7.005709 ACTAATAACCAGCTTAGTTGTGTCT 57.994 36.000 8.80 0.00 35.22 3.41
280 281 7.063544 CAGACTAATAACCAGCTTAGTTGTGTC 59.936 40.741 8.80 7.13 38.09 3.67
281 282 6.874134 CAGACTAATAACCAGCTTAGTTGTGT 59.126 38.462 8.80 0.00 38.09 3.72
282 283 6.874134 ACAGACTAATAACCAGCTTAGTTGTG 59.126 38.462 8.80 6.13 38.09 3.33
283 284 6.874134 CACAGACTAATAACCAGCTTAGTTGT 59.126 38.462 8.80 6.23 38.09 3.32
284 285 7.063544 GTCACAGACTAATAACCAGCTTAGTTG 59.936 40.741 8.80 5.75 38.09 3.16
285 286 7.097834 GTCACAGACTAATAACCAGCTTAGTT 58.902 38.462 4.41 4.41 38.09 2.24
286 287 6.210784 TGTCACAGACTAATAACCAGCTTAGT 59.789 38.462 0.00 0.00 40.08 2.24
287 288 6.631016 TGTCACAGACTAATAACCAGCTTAG 58.369 40.000 0.00 0.00 33.15 2.18
288 289 6.599356 TGTCACAGACTAATAACCAGCTTA 57.401 37.500 0.00 0.00 33.15 3.09
289 290 5.483685 TGTCACAGACTAATAACCAGCTT 57.516 39.130 0.00 0.00 33.15 3.74
290 291 5.483685 TTGTCACAGACTAATAACCAGCT 57.516 39.130 0.00 0.00 33.15 4.24
291 292 6.554334 TTTTGTCACAGACTAATAACCAGC 57.446 37.500 0.00 0.00 33.15 4.85
292 293 8.783093 TCAATTTTGTCACAGACTAATAACCAG 58.217 33.333 0.00 0.00 33.15 4.00
293 294 8.684386 TCAATTTTGTCACAGACTAATAACCA 57.316 30.769 0.00 0.00 33.15 3.67
299 300 9.868277 AACAAATTCAATTTTGTCACAGACTAA 57.132 25.926 3.32 0.00 46.33 2.24
300 301 9.868277 AAACAAATTCAATTTTGTCACAGACTA 57.132 25.926 3.32 0.00 46.33 2.59
301 302 8.776376 AAACAAATTCAATTTTGTCACAGACT 57.224 26.923 3.32 0.00 46.33 3.24
303 304 9.868277 ACTAAACAAATTCAATTTTGTCACAGA 57.132 25.926 3.32 0.00 46.33 3.41
316 317 8.789762 GGGCTCTTTAACTACTAAACAAATTCA 58.210 33.333 0.00 0.00 0.00 2.57
317 318 8.789762 TGGGCTCTTTAACTACTAAACAAATTC 58.210 33.333 0.00 0.00 0.00 2.17
318 319 8.573885 GTGGGCTCTTTAACTACTAAACAAATT 58.426 33.333 0.00 0.00 0.00 1.82
319 320 7.094933 CGTGGGCTCTTTAACTACTAAACAAAT 60.095 37.037 0.00 0.00 0.00 2.32
320 321 6.203338 CGTGGGCTCTTTAACTACTAAACAAA 59.797 38.462 0.00 0.00 0.00 2.83
321 322 5.697633 CGTGGGCTCTTTAACTACTAAACAA 59.302 40.000 0.00 0.00 0.00 2.83
322 323 5.221501 ACGTGGGCTCTTTAACTACTAAACA 60.222 40.000 0.00 0.00 0.00 2.83
323 324 5.233225 ACGTGGGCTCTTTAACTACTAAAC 58.767 41.667 0.00 0.00 0.00 2.01
324 325 5.010922 TGACGTGGGCTCTTTAACTACTAAA 59.989 40.000 0.00 0.00 0.00 1.85
325 326 4.523943 TGACGTGGGCTCTTTAACTACTAA 59.476 41.667 0.00 0.00 0.00 2.24
326 327 4.081406 TGACGTGGGCTCTTTAACTACTA 58.919 43.478 0.00 0.00 0.00 1.82
327 328 2.895404 TGACGTGGGCTCTTTAACTACT 59.105 45.455 0.00 0.00 0.00 2.57
328 329 2.991866 GTGACGTGGGCTCTTTAACTAC 59.008 50.000 0.00 0.00 0.00 2.73
329 330 2.895404 AGTGACGTGGGCTCTTTAACTA 59.105 45.455 0.00 0.00 0.00 2.24
330 331 1.692519 AGTGACGTGGGCTCTTTAACT 59.307 47.619 0.00 0.00 0.00 2.24
331 332 2.165319 AGTGACGTGGGCTCTTTAAC 57.835 50.000 0.00 0.00 0.00 2.01
332 333 2.367567 AGAAGTGACGTGGGCTCTTTAA 59.632 45.455 0.00 0.00 0.00 1.52
333 334 1.968493 AGAAGTGACGTGGGCTCTTTA 59.032 47.619 0.00 0.00 0.00 1.85
334 335 0.759346 AGAAGTGACGTGGGCTCTTT 59.241 50.000 0.00 0.00 0.00 2.52
335 336 1.629043 TAGAAGTGACGTGGGCTCTT 58.371 50.000 0.00 0.00 0.00 2.85
336 337 1.751924 GATAGAAGTGACGTGGGCTCT 59.248 52.381 0.00 0.00 0.00 4.09
337 338 1.751924 AGATAGAAGTGACGTGGGCTC 59.248 52.381 0.00 0.00 0.00 4.70
338 339 1.853963 AGATAGAAGTGACGTGGGCT 58.146 50.000 0.00 0.00 0.00 5.19
339 340 3.570550 AGATAGATAGAAGTGACGTGGGC 59.429 47.826 0.00 0.00 0.00 5.36
340 341 6.879276 TTAGATAGATAGAAGTGACGTGGG 57.121 41.667 0.00 0.00 0.00 4.61
341 342 7.040340 ACCATTAGATAGATAGAAGTGACGTGG 60.040 40.741 0.00 0.00 0.00 4.94
342 343 7.877003 ACCATTAGATAGATAGAAGTGACGTG 58.123 38.462 0.00 0.00 0.00 4.49
343 344 9.001542 GTACCATTAGATAGATAGAAGTGACGT 57.998 37.037 0.00 0.00 0.00 4.34
344 345 8.452534 GGTACCATTAGATAGATAGAAGTGACG 58.547 40.741 7.15 0.00 0.00 4.35
345 346 8.452534 CGGTACCATTAGATAGATAGAAGTGAC 58.547 40.741 13.54 0.00 0.00 3.67
346 347 8.380867 TCGGTACCATTAGATAGATAGAAGTGA 58.619 37.037 13.54 0.00 0.00 3.41
347 348 8.563123 TCGGTACCATTAGATAGATAGAAGTG 57.437 38.462 13.54 0.00 0.00 3.16
348 349 9.756571 AATCGGTACCATTAGATAGATAGAAGT 57.243 33.333 13.54 0.00 0.00 3.01
351 352 9.339850 GCTAATCGGTACCATTAGATAGATAGA 57.660 37.037 29.25 11.88 36.34 1.98
352 353 8.569641 GGCTAATCGGTACCATTAGATAGATAG 58.430 40.741 29.25 17.00 36.34 2.08
353 354 7.504911 GGGCTAATCGGTACCATTAGATAGATA 59.495 40.741 29.25 10.50 36.34 1.98
354 355 6.324254 GGGCTAATCGGTACCATTAGATAGAT 59.676 42.308 29.25 14.83 36.34 1.98
355 356 5.655532 GGGCTAATCGGTACCATTAGATAGA 59.344 44.000 29.25 13.55 36.34 1.98
356 357 5.163437 GGGGCTAATCGGTACCATTAGATAG 60.163 48.000 29.25 17.33 36.34 2.08
357 358 4.713321 GGGGCTAATCGGTACCATTAGATA 59.287 45.833 29.25 10.52 36.34 1.98
358 359 3.518303 GGGGCTAATCGGTACCATTAGAT 59.482 47.826 29.25 16.74 36.34 1.98
359 360 2.901839 GGGGCTAATCGGTACCATTAGA 59.098 50.000 29.25 15.53 36.34 2.10
360 361 2.635915 TGGGGCTAATCGGTACCATTAG 59.364 50.000 24.93 24.93 37.04 1.73
361 362 2.369532 GTGGGGCTAATCGGTACCATTA 59.630 50.000 13.54 13.22 0.00 1.90
362 363 1.142262 GTGGGGCTAATCGGTACCATT 59.858 52.381 13.54 12.80 0.00 3.16
363 364 0.763035 GTGGGGCTAATCGGTACCAT 59.237 55.000 13.54 1.74 0.00 3.55
364 365 1.339644 GGTGGGGCTAATCGGTACCA 61.340 60.000 13.54 0.00 0.00 3.25
365 366 1.052694 AGGTGGGGCTAATCGGTACC 61.053 60.000 0.16 0.16 0.00 3.34
366 367 0.835276 AAGGTGGGGCTAATCGGTAC 59.165 55.000 0.00 0.00 0.00 3.34
367 368 1.125633 GAAGGTGGGGCTAATCGGTA 58.874 55.000 0.00 0.00 0.00 4.02
368 369 1.632965 GGAAGGTGGGGCTAATCGGT 61.633 60.000 0.00 0.00 0.00 4.69
369 370 1.148498 GGAAGGTGGGGCTAATCGG 59.852 63.158 0.00 0.00 0.00 4.18
370 371 0.546598 AAGGAAGGTGGGGCTAATCG 59.453 55.000 0.00 0.00 0.00 3.34
371 372 1.847088 AGAAGGAAGGTGGGGCTAATC 59.153 52.381 0.00 0.00 0.00 1.75
372 373 1.987080 AGAAGGAAGGTGGGGCTAAT 58.013 50.000 0.00 0.00 0.00 1.73
373 374 1.755200 AAGAAGGAAGGTGGGGCTAA 58.245 50.000 0.00 0.00 0.00 3.09
374 375 1.755200 AAAGAAGGAAGGTGGGGCTA 58.245 50.000 0.00 0.00 0.00 3.93
375 376 1.636003 CTAAAGAAGGAAGGTGGGGCT 59.364 52.381 0.00 0.00 0.00 5.19
376 377 1.633945 TCTAAAGAAGGAAGGTGGGGC 59.366 52.381 0.00 0.00 0.00 5.80
377 378 5.710409 TTATCTAAAGAAGGAAGGTGGGG 57.290 43.478 0.00 0.00 0.00 4.96
378 379 8.055790 AGATTTTATCTAAAGAAGGAAGGTGGG 58.944 37.037 0.00 0.00 38.00 4.61
379 380 9.467796 AAGATTTTATCTAAAGAAGGAAGGTGG 57.532 33.333 0.00 0.00 39.08 4.61
402 403 9.850628 CTCGTGGGTATATTTAAATCGATAAGA 57.149 33.333 3.39 0.00 0.00 2.10
403 404 9.635520 ACTCGTGGGTATATTTAAATCGATAAG 57.364 33.333 3.39 0.00 0.00 1.73
406 407 8.800332 ACTACTCGTGGGTATATTTAAATCGAT 58.200 33.333 3.39 0.00 0.00 3.59
407 408 8.169977 ACTACTCGTGGGTATATTTAAATCGA 57.830 34.615 3.39 5.00 0.00 3.59
408 409 8.295288 AGACTACTCGTGGGTATATTTAAATCG 58.705 37.037 3.39 0.52 0.00 3.34
409 410 9.408069 CAGACTACTCGTGGGTATATTTAAATC 57.592 37.037 3.39 0.00 0.00 2.17
410 411 8.365647 CCAGACTACTCGTGGGTATATTTAAAT 58.634 37.037 5.89 5.89 0.00 1.40
411 412 7.560991 TCCAGACTACTCGTGGGTATATTTAAA 59.439 37.037 0.00 0.00 31.70 1.52
412 413 7.062322 TCCAGACTACTCGTGGGTATATTTAA 58.938 38.462 0.00 0.00 31.70 1.52
413 414 6.604171 TCCAGACTACTCGTGGGTATATTTA 58.396 40.000 0.00 0.00 31.70 1.40
414 415 5.452255 TCCAGACTACTCGTGGGTATATTT 58.548 41.667 0.00 0.00 31.70 1.40
415 416 5.057843 TCCAGACTACTCGTGGGTATATT 57.942 43.478 0.00 0.00 31.70 1.28
416 417 4.350225 TCTCCAGACTACTCGTGGGTATAT 59.650 45.833 0.00 0.00 31.70 0.86
417 418 3.713248 TCTCCAGACTACTCGTGGGTATA 59.287 47.826 0.00 0.00 31.70 1.47
418 419 2.508716 TCTCCAGACTACTCGTGGGTAT 59.491 50.000 0.00 0.00 31.70 2.73
419 420 1.911357 TCTCCAGACTACTCGTGGGTA 59.089 52.381 0.00 0.00 31.70 3.69
420 421 0.697079 TCTCCAGACTACTCGTGGGT 59.303 55.000 0.00 0.00 31.70 4.51
421 422 1.835494 TTCTCCAGACTACTCGTGGG 58.165 55.000 0.00 0.00 31.70 4.61
422 423 2.557056 TGTTTCTCCAGACTACTCGTGG 59.443 50.000 0.00 0.00 0.00 4.94
423 424 3.917329 TGTTTCTCCAGACTACTCGTG 57.083 47.619 0.00 0.00 0.00 4.35
424 425 6.433404 TCTTATTGTTTCTCCAGACTACTCGT 59.567 38.462 0.00 0.00 0.00 4.18
425 426 6.853720 TCTTATTGTTTCTCCAGACTACTCG 58.146 40.000 0.00 0.00 0.00 4.18
426 427 8.057536 TCTCTTATTGTTTCTCCAGACTACTC 57.942 38.462 0.00 0.00 0.00 2.59
427 428 8.423906 TTCTCTTATTGTTTCTCCAGACTACT 57.576 34.615 0.00 0.00 0.00 2.57
428 429 9.145865 CTTTCTCTTATTGTTTCTCCAGACTAC 57.854 37.037 0.00 0.00 0.00 2.73
429 430 9.090103 TCTTTCTCTTATTGTTTCTCCAGACTA 57.910 33.333 0.00 0.00 0.00 2.59
430 431 7.875554 GTCTTTCTCTTATTGTTTCTCCAGACT 59.124 37.037 0.00 0.00 0.00 3.24
431 432 7.118535 GGTCTTTCTCTTATTGTTTCTCCAGAC 59.881 40.741 0.00 0.00 0.00 3.51
432 433 7.162082 GGTCTTTCTCTTATTGTTTCTCCAGA 58.838 38.462 0.00 0.00 0.00 3.86
433 434 6.936900 TGGTCTTTCTCTTATTGTTTCTCCAG 59.063 38.462 0.00 0.00 0.00 3.86
434 435 6.837312 TGGTCTTTCTCTTATTGTTTCTCCA 58.163 36.000 0.00 0.00 0.00 3.86
435 436 7.745620 TTGGTCTTTCTCTTATTGTTTCTCC 57.254 36.000 0.00 0.00 0.00 3.71
446 447 9.853177 TCTTCTTCTTTATTTGGTCTTTCTCTT 57.147 29.630 0.00 0.00 0.00 2.85
449 450 8.518702 GCATCTTCTTCTTTATTTGGTCTTTCT 58.481 33.333 0.00 0.00 0.00 2.52
450 451 8.299570 TGCATCTTCTTCTTTATTTGGTCTTTC 58.700 33.333 0.00 0.00 0.00 2.62
451 452 8.181904 TGCATCTTCTTCTTTATTTGGTCTTT 57.818 30.769 0.00 0.00 0.00 2.52
452 453 7.765695 TGCATCTTCTTCTTTATTTGGTCTT 57.234 32.000 0.00 0.00 0.00 3.01
453 454 7.951347 ATGCATCTTCTTCTTTATTTGGTCT 57.049 32.000 0.00 0.00 0.00 3.85
454 455 8.677300 TGTATGCATCTTCTTCTTTATTTGGTC 58.323 33.333 0.19 0.00 0.00 4.02
455 456 8.462016 GTGTATGCATCTTCTTCTTTATTTGGT 58.538 33.333 0.19 0.00 0.00 3.67
456 457 7.641411 CGTGTATGCATCTTCTTCTTTATTTGG 59.359 37.037 0.19 0.00 0.00 3.28
457 458 7.164826 GCGTGTATGCATCTTCTTCTTTATTTG 59.835 37.037 0.19 0.00 34.15 2.32
458 459 7.066284 AGCGTGTATGCATCTTCTTCTTTATTT 59.934 33.333 0.19 0.00 37.31 1.40
459 460 6.540189 AGCGTGTATGCATCTTCTTCTTTATT 59.460 34.615 0.19 0.00 37.31 1.40
460 461 6.051717 AGCGTGTATGCATCTTCTTCTTTAT 58.948 36.000 0.19 0.00 37.31 1.40
461 462 5.419542 AGCGTGTATGCATCTTCTTCTTTA 58.580 37.500 0.19 0.00 37.31 1.85
462 463 4.256920 AGCGTGTATGCATCTTCTTCTTT 58.743 39.130 0.19 0.00 37.31 2.52
463 464 3.866651 AGCGTGTATGCATCTTCTTCTT 58.133 40.909 0.19 0.00 37.31 2.52
464 465 3.533606 AGCGTGTATGCATCTTCTTCT 57.466 42.857 0.19 0.00 37.31 2.85
465 466 3.372206 ACAAGCGTGTATGCATCTTCTTC 59.628 43.478 0.19 0.00 35.72 2.87
466 467 3.338249 ACAAGCGTGTATGCATCTTCTT 58.662 40.909 0.19 0.00 35.72 2.52
467 468 2.977914 ACAAGCGTGTATGCATCTTCT 58.022 42.857 0.19 0.00 35.72 2.85
468 469 3.419915 CAACAAGCGTGTATGCATCTTC 58.580 45.455 5.50 0.00 36.80 2.87
469 470 2.162208 CCAACAAGCGTGTATGCATCTT 59.838 45.455 5.50 0.00 36.80 2.40
470 471 1.739466 CCAACAAGCGTGTATGCATCT 59.261 47.619 5.50 0.00 36.80 2.90
471 472 1.795162 GCCAACAAGCGTGTATGCATC 60.795 52.381 17.36 0.00 36.80 3.91
472 473 0.171007 GCCAACAAGCGTGTATGCAT 59.829 50.000 17.36 3.79 36.80 3.96
473 474 0.888736 AGCCAACAAGCGTGTATGCA 60.889 50.000 21.93 0.00 36.80 3.96
474 475 0.454957 CAGCCAACAAGCGTGTATGC 60.455 55.000 15.39 15.39 36.80 3.14
475 476 0.168788 CCAGCCAACAAGCGTGTATG 59.831 55.000 5.50 6.82 36.80 2.39
476 477 0.036164 TCCAGCCAACAAGCGTGTAT 59.964 50.000 5.50 0.00 36.80 2.29
477 478 0.602638 CTCCAGCCAACAAGCGTGTA 60.603 55.000 5.50 0.00 36.80 2.90
478 479 1.893808 CTCCAGCCAACAAGCGTGT 60.894 57.895 0.00 0.00 40.75 4.49
479 480 2.620112 CCTCCAGCCAACAAGCGTG 61.620 63.158 0.00 0.00 38.01 5.34
480 481 2.129555 ATCCTCCAGCCAACAAGCGT 62.130 55.000 0.00 0.00 38.01 5.07
481 482 1.377725 ATCCTCCAGCCAACAAGCG 60.378 57.895 0.00 0.00 38.01 4.68
482 483 1.318158 CCATCCTCCAGCCAACAAGC 61.318 60.000 0.00 0.00 0.00 4.01
483 484 0.329261 TCCATCCTCCAGCCAACAAG 59.671 55.000 0.00 0.00 0.00 3.16
484 485 0.329261 CTCCATCCTCCAGCCAACAA 59.671 55.000 0.00 0.00 0.00 2.83
485 486 1.565390 CCTCCATCCTCCAGCCAACA 61.565 60.000 0.00 0.00 0.00 3.33
486 487 1.225704 CCTCCATCCTCCAGCCAAC 59.774 63.158 0.00 0.00 0.00 3.77
487 488 0.327867 ATCCTCCATCCTCCAGCCAA 60.328 55.000 0.00 0.00 0.00 4.52
488 489 0.567687 TATCCTCCATCCTCCAGCCA 59.432 55.000 0.00 0.00 0.00 4.75
489 490 1.203237 TCTATCCTCCATCCTCCAGCC 60.203 57.143 0.00 0.00 0.00 4.85
490 491 2.178580 CTCTATCCTCCATCCTCCAGC 58.821 57.143 0.00 0.00 0.00 4.85
491 492 3.333381 TCTCTCTATCCTCCATCCTCCAG 59.667 52.174 0.00 0.00 0.00 3.86
492 493 3.333381 CTCTCTCTATCCTCCATCCTCCA 59.667 52.174 0.00 0.00 0.00 3.86
493 494 3.309121 CCTCTCTCTATCCTCCATCCTCC 60.309 56.522 0.00 0.00 0.00 4.30
494 495 3.309121 CCCTCTCTCTATCCTCCATCCTC 60.309 56.522 0.00 0.00 0.00 3.71
495 496 2.654385 CCCTCTCTCTATCCTCCATCCT 59.346 54.545 0.00 0.00 0.00 3.24
496 497 2.652348 TCCCTCTCTCTATCCTCCATCC 59.348 54.545 0.00 0.00 0.00 3.51
497 498 3.591527 TCTCCCTCTCTCTATCCTCCATC 59.408 52.174 0.00 0.00 0.00 3.51
498 499 3.619085 TCTCCCTCTCTCTATCCTCCAT 58.381 50.000 0.00 0.00 0.00 3.41
499 500 3.082116 TCTCCCTCTCTCTATCCTCCA 57.918 52.381 0.00 0.00 0.00 3.86
500 501 3.877735 GCATCTCCCTCTCTCTATCCTCC 60.878 56.522 0.00 0.00 0.00 4.30
501 502 3.245229 TGCATCTCCCTCTCTCTATCCTC 60.245 52.174 0.00 0.00 0.00 3.71
502 503 2.721355 TGCATCTCCCTCTCTCTATCCT 59.279 50.000 0.00 0.00 0.00 3.24
503 504 3.168035 TGCATCTCCCTCTCTCTATCC 57.832 52.381 0.00 0.00 0.00 2.59
504 505 4.088634 ACATGCATCTCCCTCTCTCTATC 58.911 47.826 0.00 0.00 0.00 2.08
505 506 4.130719 ACATGCATCTCCCTCTCTCTAT 57.869 45.455 0.00 0.00 0.00 1.98
506 507 3.609256 ACATGCATCTCCCTCTCTCTA 57.391 47.619 0.00 0.00 0.00 2.43
507 508 2.475339 ACATGCATCTCCCTCTCTCT 57.525 50.000 0.00 0.00 0.00 3.10
508 509 2.030363 CGTACATGCATCTCCCTCTCTC 60.030 54.545 0.00 0.00 0.00 3.20
509 510 1.959985 CGTACATGCATCTCCCTCTCT 59.040 52.381 0.00 0.00 0.00 3.10
510 511 1.000283 CCGTACATGCATCTCCCTCTC 60.000 57.143 0.00 0.00 0.00 3.20
511 512 1.043816 CCGTACATGCATCTCCCTCT 58.956 55.000 0.00 0.00 0.00 3.69
512 513 0.753262 ACCGTACATGCATCTCCCTC 59.247 55.000 0.00 0.00 0.00 4.30
513 514 1.134401 CAACCGTACATGCATCTCCCT 60.134 52.381 0.00 0.00 0.00 4.20
514 515 1.299541 CAACCGTACATGCATCTCCC 58.700 55.000 0.00 0.00 0.00 4.30
515 516 1.299541 CCAACCGTACATGCATCTCC 58.700 55.000 0.00 0.00 0.00 3.71
516 517 0.657840 GCCAACCGTACATGCATCTC 59.342 55.000 0.00 0.00 0.00 2.75
517 518 0.253044 AGCCAACCGTACATGCATCT 59.747 50.000 0.00 0.00 0.00 2.90
518 519 0.378257 CAGCCAACCGTACATGCATC 59.622 55.000 0.00 0.00 0.00 3.91
519 520 1.031571 CCAGCCAACCGTACATGCAT 61.032 55.000 0.00 0.00 0.00 3.96
520 521 1.673993 CCAGCCAACCGTACATGCA 60.674 57.895 0.00 0.00 0.00 3.96
521 522 0.958382 TTCCAGCCAACCGTACATGC 60.958 55.000 0.00 0.00 0.00 4.06
522 523 1.086696 CTTCCAGCCAACCGTACATG 58.913 55.000 0.00 0.00 0.00 3.21
523 524 0.035439 CCTTCCAGCCAACCGTACAT 60.035 55.000 0.00 0.00 0.00 2.29
524 525 1.122632 TCCTTCCAGCCAACCGTACA 61.123 55.000 0.00 0.00 0.00 2.90
525 526 0.035739 TTCCTTCCAGCCAACCGTAC 59.964 55.000 0.00 0.00 0.00 3.67
526 527 0.988832 ATTCCTTCCAGCCAACCGTA 59.011 50.000 0.00 0.00 0.00 4.02
527 528 0.988832 TATTCCTTCCAGCCAACCGT 59.011 50.000 0.00 0.00 0.00 4.83
528 529 2.122783 TTATTCCTTCCAGCCAACCG 57.877 50.000 0.00 0.00 0.00 4.44
529 530 2.166459 GCTTTATTCCTTCCAGCCAACC 59.834 50.000 0.00 0.00 0.00 3.77
530 531 3.092301 AGCTTTATTCCTTCCAGCCAAC 58.908 45.455 0.00 0.00 0.00 3.77
531 532 3.245229 TGAGCTTTATTCCTTCCAGCCAA 60.245 43.478 0.00 0.00 0.00 4.52
532 533 2.308570 TGAGCTTTATTCCTTCCAGCCA 59.691 45.455 0.00 0.00 0.00 4.75
533 534 2.685388 GTGAGCTTTATTCCTTCCAGCC 59.315 50.000 0.00 0.00 0.00 4.85
534 535 2.685388 GGTGAGCTTTATTCCTTCCAGC 59.315 50.000 0.00 0.00 0.00 4.85
535 536 4.227864 AGGTGAGCTTTATTCCTTCCAG 57.772 45.455 0.00 0.00 0.00 3.86
536 537 4.335416 CAAGGTGAGCTTTATTCCTTCCA 58.665 43.478 0.00 0.00 36.52 3.53
537 538 3.129462 GCAAGGTGAGCTTTATTCCTTCC 59.871 47.826 0.00 0.00 36.52 3.46
538 539 3.129462 GGCAAGGTGAGCTTTATTCCTTC 59.871 47.826 0.00 0.00 36.52 3.46
539 540 3.092301 GGCAAGGTGAGCTTTATTCCTT 58.908 45.455 0.00 0.00 38.79 3.36
540 541 2.310052 AGGCAAGGTGAGCTTTATTCCT 59.690 45.455 0.00 0.00 0.00 3.36
541 542 2.728007 AGGCAAGGTGAGCTTTATTCC 58.272 47.619 0.00 0.00 0.00 3.01
542 543 5.897377 TTTAGGCAAGGTGAGCTTTATTC 57.103 39.130 0.00 0.00 0.00 1.75
543 544 7.068716 CCTTATTTAGGCAAGGTGAGCTTTATT 59.931 37.037 0.00 0.00 37.17 1.40
544 545 6.547510 CCTTATTTAGGCAAGGTGAGCTTTAT 59.452 38.462 0.00 0.00 37.17 1.40
545 546 5.885912 CCTTATTTAGGCAAGGTGAGCTTTA 59.114 40.000 0.00 0.00 37.17 1.85
546 547 4.706962 CCTTATTTAGGCAAGGTGAGCTTT 59.293 41.667 0.00 0.00 37.17 3.51
547 548 4.018415 TCCTTATTTAGGCAAGGTGAGCTT 60.018 41.667 0.00 0.00 44.37 3.74
548 549 3.523564 TCCTTATTTAGGCAAGGTGAGCT 59.476 43.478 0.00 0.00 44.37 4.09
549 550 3.886123 TCCTTATTTAGGCAAGGTGAGC 58.114 45.455 1.04 0.00 44.37 4.26
550 551 4.884164 CCTTCCTTATTTAGGCAAGGTGAG 59.116 45.833 0.00 1.71 44.37 3.51
551 552 4.325030 CCCTTCCTTATTTAGGCAAGGTGA 60.325 45.833 13.87 0.00 43.12 4.02
552 553 3.954258 CCCTTCCTTATTTAGGCAAGGTG 59.046 47.826 13.87 6.61 43.12 4.00
553 554 3.856206 TCCCTTCCTTATTTAGGCAAGGT 59.144 43.478 13.87 0.00 43.12 3.50
554 555 4.519906 TCCCTTCCTTATTTAGGCAAGG 57.480 45.455 10.53 10.53 44.37 3.61
555 556 8.712228 AATTATCCCTTCCTTATTTAGGCAAG 57.288 34.615 0.00 0.00 44.37 4.01
557 558 9.975218 GATAATTATCCCTTCCTTATTTAGGCA 57.025 33.333 13.62 0.00 44.37 4.75
558 559 9.409918 GGATAATTATCCCTTCCTTATTTAGGC 57.590 37.037 27.81 2.74 45.20 3.93
1411 1413 5.942826 CCTTCTTCTTCAACATCCTAAGCTT 59.057 40.000 3.48 3.48 0.00 3.74
1698 1701 6.367969 AGCTGCATTTCATTGATCAAAAGTTC 59.632 34.615 13.09 0.00 0.00 3.01
2367 2373 3.390175 TTTTCAACCTTCCAACCCTCA 57.610 42.857 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.