Multiple sequence alignment - TraesCS7A01G073200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G073200 chr7A 100.000 3511 0 0 1 3511 38754574 38758084 0.000000e+00 6484.0
1 TraesCS7A01G073200 chr7A 95.436 3002 129 3 517 3511 546045374 546042374 0.000000e+00 4778.0
2 TraesCS7A01G073200 chr7A 82.468 154 25 1 1800 1953 722075563 722075714 2.200000e-27 134.0
3 TraesCS7A01G073200 chr5A 87.256 1483 170 18 2041 3511 46248772 46247297 0.000000e+00 1674.0
4 TraesCS7A01G073200 chr5A 80.501 1077 180 23 889 1955 46250717 46249661 0.000000e+00 798.0
5 TraesCS7A01G073200 chr3B 89.340 1304 109 10 1793 3080 741379467 741380756 0.000000e+00 1611.0
6 TraesCS7A01G073200 chr3B 85.370 1285 178 9 518 1797 741369048 741370327 0.000000e+00 1323.0
7 TraesCS7A01G073200 chr6B 83.482 448 68 5 1 446 487120496 487120053 2.520000e-111 412.0
8 TraesCS7A01G073200 chr4B 83.296 449 69 5 1 447 567746936 567747380 3.260000e-110 409.0
9 TraesCS7A01G073200 chr2A 82.692 312 51 2 130 440 423750342 423750651 1.240000e-69 274.0
10 TraesCS7A01G073200 chr7D 77.273 418 88 6 2905 3317 14238989 14239404 4.530000e-59 239.0
11 TraesCS7A01G073200 chr7D 90.566 159 11 1 297 451 631241451 631241293 1.280000e-49 207.0
12 TraesCS7A01G073200 chr7D 78.788 132 18 9 3115 3241 28243172 28243046 2.910000e-11 80.5
13 TraesCS7A01G073200 chr5B 80.357 224 44 0 1731 1954 526650614 526650837 1.680000e-38 171.0
14 TraesCS7A01G073200 chr1B 87.234 141 18 0 1812 1952 563744944 563744804 1.010000e-35 161.0
15 TraesCS7A01G073200 chr1D 80.000 215 37 6 1741 1952 409531581 409531792 1.690000e-33 154.0
16 TraesCS7A01G073200 chr1D 77.640 161 34 2 2912 3070 299885723 299885563 2.880000e-16 97.1
17 TraesCS7A01G073200 chr7B 78.744 207 41 3 2863 3068 684463768 684463972 6.110000e-28 135.0
18 TraesCS7A01G073200 chr7B 89.041 73 8 0 1828 1900 60450537 60450465 1.340000e-14 91.6
19 TraesCS7A01G073200 chr4A 85.827 127 18 0 1827 1953 704487839 704487713 6.110000e-28 135.0
20 TraesCS7A01G073200 chr6A 89.157 83 9 0 2563 2645 615644146 615644064 1.720000e-18 104.0
21 TraesCS7A01G073200 chr6A 87.209 86 11 0 2560 2645 430948230 430948315 8.020000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G073200 chr7A 38754574 38758084 3510 False 6484 6484 100.0000 1 3511 1 chr7A.!!$F1 3510
1 TraesCS7A01G073200 chr7A 546042374 546045374 3000 True 4778 4778 95.4360 517 3511 1 chr7A.!!$R1 2994
2 TraesCS7A01G073200 chr5A 46247297 46250717 3420 True 1236 1674 83.8785 889 3511 2 chr5A.!!$R1 2622
3 TraesCS7A01G073200 chr3B 741379467 741380756 1289 False 1611 1611 89.3400 1793 3080 1 chr3B.!!$F2 1287
4 TraesCS7A01G073200 chr3B 741369048 741370327 1279 False 1323 1323 85.3700 518 1797 1 chr3B.!!$F1 1279

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
556 557 0.032678 CCCAACTGCGCTCGATATCT 59.967 55.0 9.73 0.0 0.00 1.98 F
1109 1115 0.179056 CCTAACCTACCGCCATGTGG 60.179 60.0 0.00 0.0 39.41 4.17 F
1291 1297 0.599204 GGCGAAGTTGAGGTGAACGA 60.599 55.0 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2090 2916 0.035881 CTGGACACTCACACCTGCAT 59.964 55.000 0.0 0.0 0.0 3.96 R
2344 3170 0.827368 CCTCAGGGTCCTCTTAGTGC 59.173 60.000 0.0 0.0 0.0 4.40 R
3163 3995 1.080772 CTCGCTCCGTTGTGTGCTA 60.081 57.895 0.0 0.0 0.0 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.993535 CTCCACCAGCTTCTTGCC 58.006 61.111 0.00 0.00 44.23 4.52
18 19 1.073722 CTCCACCAGCTTCTTGCCA 59.926 57.895 0.00 0.00 44.23 4.92
19 20 0.323178 CTCCACCAGCTTCTTGCCAT 60.323 55.000 0.00 0.00 44.23 4.40
20 21 0.322816 TCCACCAGCTTCTTGCCATC 60.323 55.000 0.00 0.00 44.23 3.51
21 22 1.651240 CCACCAGCTTCTTGCCATCG 61.651 60.000 0.00 0.00 44.23 3.84
22 23 0.674581 CACCAGCTTCTTGCCATCGA 60.675 55.000 0.00 0.00 44.23 3.59
23 24 0.254178 ACCAGCTTCTTGCCATCGAT 59.746 50.000 0.00 0.00 44.23 3.59
24 25 0.942962 CCAGCTTCTTGCCATCGATC 59.057 55.000 0.00 0.00 44.23 3.69
25 26 1.660167 CAGCTTCTTGCCATCGATCA 58.340 50.000 0.00 0.00 44.23 2.92
26 27 1.598132 CAGCTTCTTGCCATCGATCAG 59.402 52.381 0.00 0.00 44.23 2.90
27 28 0.942962 GCTTCTTGCCATCGATCAGG 59.057 55.000 0.00 0.00 35.15 3.86
28 29 1.590932 CTTCTTGCCATCGATCAGGG 58.409 55.000 0.00 0.00 0.00 4.45
29 30 1.139654 CTTCTTGCCATCGATCAGGGA 59.860 52.381 4.50 0.00 0.00 4.20
30 31 0.755079 TCTTGCCATCGATCAGGGAG 59.245 55.000 4.50 0.00 0.00 4.30
31 32 0.755079 CTTGCCATCGATCAGGGAGA 59.245 55.000 4.50 0.00 0.00 3.71
32 33 1.139654 CTTGCCATCGATCAGGGAGAA 59.860 52.381 4.50 0.00 0.00 2.87
33 34 1.203237 TGCCATCGATCAGGGAGAAA 58.797 50.000 4.50 0.00 0.00 2.52
34 35 1.139654 TGCCATCGATCAGGGAGAAAG 59.860 52.381 4.50 0.00 0.00 2.62
35 36 1.876322 CCATCGATCAGGGAGAAAGC 58.124 55.000 0.00 0.00 0.00 3.51
36 37 1.139654 CCATCGATCAGGGAGAAAGCA 59.860 52.381 0.00 0.00 0.00 3.91
37 38 2.208431 CATCGATCAGGGAGAAAGCAC 58.792 52.381 0.00 0.00 0.00 4.40
38 39 1.561643 TCGATCAGGGAGAAAGCACT 58.438 50.000 0.00 0.00 0.00 4.40
39 40 1.478510 TCGATCAGGGAGAAAGCACTC 59.521 52.381 0.00 0.00 36.31 3.51
40 41 1.480137 CGATCAGGGAGAAAGCACTCT 59.520 52.381 0.00 0.00 37.13 3.24
41 42 2.738000 CGATCAGGGAGAAAGCACTCTG 60.738 54.545 0.00 0.00 37.13 3.35
42 43 1.722034 TCAGGGAGAAAGCACTCTGT 58.278 50.000 0.00 0.00 37.13 3.41
43 44 2.050144 TCAGGGAGAAAGCACTCTGTT 58.950 47.619 0.00 0.00 37.13 3.16
44 45 2.037772 TCAGGGAGAAAGCACTCTGTTC 59.962 50.000 0.00 0.00 37.13 3.18
45 46 1.001406 AGGGAGAAAGCACTCTGTTCG 59.999 52.381 0.00 0.00 37.13 3.95
46 47 1.433534 GGAGAAAGCACTCTGTTCGG 58.566 55.000 0.00 0.00 37.13 4.30
47 48 1.270358 GGAGAAAGCACTCTGTTCGGT 60.270 52.381 0.00 0.00 37.13 4.69
48 49 2.029290 GGAGAAAGCACTCTGTTCGGTA 60.029 50.000 0.00 0.00 37.13 4.02
49 50 3.554337 GGAGAAAGCACTCTGTTCGGTAA 60.554 47.826 0.00 0.00 37.13 2.85
50 51 3.654414 AGAAAGCACTCTGTTCGGTAAG 58.346 45.455 0.00 0.00 0.00 2.34
51 52 3.321111 AGAAAGCACTCTGTTCGGTAAGA 59.679 43.478 0.00 0.00 0.00 2.10
52 53 3.963428 AAGCACTCTGTTCGGTAAGAT 57.037 42.857 0.00 0.00 0.00 2.40
53 54 3.963428 AGCACTCTGTTCGGTAAGATT 57.037 42.857 0.00 0.00 0.00 2.40
54 55 3.589988 AGCACTCTGTTCGGTAAGATTG 58.410 45.455 0.00 0.00 0.00 2.67
55 56 2.094417 GCACTCTGTTCGGTAAGATTGC 59.906 50.000 8.07 8.07 40.45 3.56
56 57 3.589988 CACTCTGTTCGGTAAGATTGCT 58.410 45.455 0.00 0.00 0.00 3.91
57 58 3.997021 CACTCTGTTCGGTAAGATTGCTT 59.003 43.478 0.00 0.00 38.15 3.91
58 59 4.092091 CACTCTGTTCGGTAAGATTGCTTC 59.908 45.833 0.00 0.00 35.56 3.86
59 60 4.021016 ACTCTGTTCGGTAAGATTGCTTCT 60.021 41.667 0.00 0.00 35.56 2.85
60 61 4.894784 TCTGTTCGGTAAGATTGCTTCTT 58.105 39.130 7.49 7.49 46.53 2.52
61 62 4.690748 TCTGTTCGGTAAGATTGCTTCTTG 59.309 41.667 11.34 0.00 44.54 3.02
62 63 3.188460 TGTTCGGTAAGATTGCTTCTTGC 59.812 43.478 11.34 10.00 44.54 4.01
63 64 3.334583 TCGGTAAGATTGCTTCTTGCT 57.665 42.857 14.23 0.00 44.54 3.91
64 65 3.262420 TCGGTAAGATTGCTTCTTGCTC 58.738 45.455 14.23 7.01 44.54 4.26
65 66 2.029728 CGGTAAGATTGCTTCTTGCTCG 59.970 50.000 14.23 12.48 44.54 5.03
66 67 2.223135 GGTAAGATTGCTTCTTGCTCGC 60.223 50.000 14.23 0.00 44.54 5.03
67 68 1.527034 AAGATTGCTTCTTGCTCGCA 58.473 45.000 2.24 0.00 43.21 5.10
68 69 0.801251 AGATTGCTTCTTGCTCGCAC 59.199 50.000 0.00 0.00 43.37 5.34
69 70 0.519999 GATTGCTTCTTGCTCGCACG 60.520 55.000 0.00 0.00 43.37 5.34
70 71 0.950555 ATTGCTTCTTGCTCGCACGA 60.951 50.000 0.00 0.00 43.37 4.35
71 72 1.560004 TTGCTTCTTGCTCGCACGAG 61.560 55.000 15.50 15.50 44.56 4.18
72 73 2.734673 GCTTCTTGCTCGCACGAGG 61.735 63.158 20.56 5.44 42.19 4.63
73 74 1.373497 CTTCTTGCTCGCACGAGGT 60.373 57.895 20.56 0.00 42.19 3.85
74 75 0.109272 CTTCTTGCTCGCACGAGGTA 60.109 55.000 20.56 0.00 42.19 3.08
75 76 0.109272 TTCTTGCTCGCACGAGGTAG 60.109 55.000 20.56 0.00 42.19 3.18
76 77 2.126071 TTGCTCGCACGAGGTAGC 60.126 61.111 20.56 8.44 42.19 3.58
83 84 4.554363 CACGAGGTAGCGAGCCGG 62.554 72.222 0.00 0.00 34.83 6.13
84 85 4.790962 ACGAGGTAGCGAGCCGGA 62.791 66.667 5.05 0.00 34.83 5.14
85 86 3.515286 CGAGGTAGCGAGCCGGAA 61.515 66.667 5.05 0.00 0.00 4.30
86 87 2.413765 GAGGTAGCGAGCCGGAAG 59.586 66.667 5.05 0.00 0.00 3.46
99 100 1.356624 CGGAAGGCCATCAAATCGC 59.643 57.895 10.67 0.00 0.00 4.58
100 101 1.735973 GGAAGGCCATCAAATCGCC 59.264 57.895 10.67 0.00 43.35 5.54
103 104 4.240881 GGCCATCAAATCGCCTCA 57.759 55.556 0.00 0.00 39.70 3.86
104 105 2.028130 GGCCATCAAATCGCCTCAG 58.972 57.895 0.00 0.00 39.70 3.35
105 106 0.749454 GGCCATCAAATCGCCTCAGT 60.749 55.000 0.00 0.00 39.70 3.41
106 107 0.379669 GCCATCAAATCGCCTCAGTG 59.620 55.000 0.00 0.00 0.00 3.66
107 108 1.742761 CCATCAAATCGCCTCAGTGT 58.257 50.000 0.00 0.00 0.00 3.55
108 109 1.399440 CCATCAAATCGCCTCAGTGTG 59.601 52.381 0.00 0.00 0.00 3.82
109 110 2.079158 CATCAAATCGCCTCAGTGTGT 58.921 47.619 0.00 0.00 0.00 3.72
110 111 1.795768 TCAAATCGCCTCAGTGTGTC 58.204 50.000 0.00 0.00 0.00 3.67
111 112 0.798776 CAAATCGCCTCAGTGTGTCC 59.201 55.000 0.00 0.00 0.00 4.02
112 113 0.321653 AAATCGCCTCAGTGTGTCCC 60.322 55.000 0.00 0.00 0.00 4.46
113 114 1.480212 AATCGCCTCAGTGTGTCCCA 61.480 55.000 0.00 0.00 0.00 4.37
114 115 1.267574 ATCGCCTCAGTGTGTCCCAT 61.268 55.000 0.00 0.00 0.00 4.00
115 116 1.448540 CGCCTCAGTGTGTCCCATC 60.449 63.158 0.00 0.00 0.00 3.51
116 117 1.892819 CGCCTCAGTGTGTCCCATCT 61.893 60.000 0.00 0.00 0.00 2.90
117 118 0.392193 GCCTCAGTGTGTCCCATCTG 60.392 60.000 0.00 0.00 0.00 2.90
118 119 0.251354 CCTCAGTGTGTCCCATCTGG 59.749 60.000 0.00 0.00 0.00 3.86
119 120 1.269958 CTCAGTGTGTCCCATCTGGA 58.730 55.000 0.00 0.00 42.41 3.86
120 121 1.206610 CTCAGTGTGTCCCATCTGGAG 59.793 57.143 0.00 0.00 46.38 3.86
121 122 1.203174 TCAGTGTGTCCCATCTGGAGA 60.203 52.381 0.00 0.00 46.38 3.71
122 123 1.625315 CAGTGTGTCCCATCTGGAGAA 59.375 52.381 0.00 0.00 46.38 2.87
123 124 1.905215 AGTGTGTCCCATCTGGAGAAG 59.095 52.381 0.00 0.00 46.38 2.85
124 125 1.065854 GTGTGTCCCATCTGGAGAAGG 60.066 57.143 0.00 0.00 46.38 3.46
125 126 0.107459 GTGTCCCATCTGGAGAAGGC 60.107 60.000 0.00 0.00 46.38 4.35
126 127 0.252881 TGTCCCATCTGGAGAAGGCT 60.253 55.000 0.00 0.00 46.38 4.58
127 128 1.008327 TGTCCCATCTGGAGAAGGCTA 59.992 52.381 0.00 0.00 46.38 3.93
128 129 1.414550 GTCCCATCTGGAGAAGGCTAC 59.585 57.143 0.00 0.00 46.38 3.58
129 130 0.761802 CCCATCTGGAGAAGGCTACC 59.238 60.000 0.00 0.00 37.39 3.18
130 131 1.500474 CCATCTGGAGAAGGCTACCA 58.500 55.000 7.55 7.55 37.39 3.25
131 132 1.839994 CCATCTGGAGAAGGCTACCAA 59.160 52.381 8.81 2.69 37.39 3.67
132 133 2.441001 CCATCTGGAGAAGGCTACCAAT 59.559 50.000 8.81 4.37 37.39 3.16
133 134 3.495806 CCATCTGGAGAAGGCTACCAATC 60.496 52.174 8.81 0.00 37.39 2.67
134 135 2.119495 TCTGGAGAAGGCTACCAATCC 58.881 52.381 8.81 3.72 33.14 3.01
135 136 1.839994 CTGGAGAAGGCTACCAATCCA 59.160 52.381 8.81 7.41 33.06 3.41
136 137 2.239654 CTGGAGAAGGCTACCAATCCAA 59.760 50.000 8.81 0.00 33.47 3.53
137 138 2.647299 TGGAGAAGGCTACCAATCCAAA 59.353 45.455 5.70 0.00 31.77 3.28
138 139 3.017442 GGAGAAGGCTACCAATCCAAAC 58.983 50.000 0.00 0.00 0.00 2.93
139 140 3.308473 GGAGAAGGCTACCAATCCAAACT 60.308 47.826 0.00 0.00 0.00 2.66
140 141 3.690460 AGAAGGCTACCAATCCAAACTG 58.310 45.455 0.00 0.00 0.00 3.16
141 142 1.839424 AGGCTACCAATCCAAACTGC 58.161 50.000 0.00 0.00 0.00 4.40
142 143 1.075374 AGGCTACCAATCCAAACTGCA 59.925 47.619 0.00 0.00 0.00 4.41
143 144 2.102578 GGCTACCAATCCAAACTGCAT 58.897 47.619 0.00 0.00 0.00 3.96
144 145 2.159198 GGCTACCAATCCAAACTGCATG 60.159 50.000 0.00 0.00 0.00 4.06
145 146 2.159198 GCTACCAATCCAAACTGCATGG 60.159 50.000 0.00 0.00 39.41 3.66
146 147 1.269012 ACCAATCCAAACTGCATGGG 58.731 50.000 5.01 0.00 38.54 4.00
147 148 1.203162 ACCAATCCAAACTGCATGGGA 60.203 47.619 5.01 1.96 38.54 4.37
148 149 1.901159 CCAATCCAAACTGCATGGGAA 59.099 47.619 5.01 0.00 38.54 3.97
149 150 2.302445 CCAATCCAAACTGCATGGGAAA 59.698 45.455 5.01 0.00 38.54 3.13
150 151 3.592059 CAATCCAAACTGCATGGGAAAG 58.408 45.455 5.01 0.00 38.54 2.62
151 152 2.673775 TCCAAACTGCATGGGAAAGA 57.326 45.000 5.01 0.00 38.54 2.52
152 153 2.956132 TCCAAACTGCATGGGAAAGAA 58.044 42.857 5.01 0.00 38.54 2.52
153 154 2.892852 TCCAAACTGCATGGGAAAGAAG 59.107 45.455 5.01 0.00 38.54 2.85
154 155 2.028748 CCAAACTGCATGGGAAAGAAGG 60.029 50.000 0.00 0.00 34.15 3.46
155 156 1.928868 AACTGCATGGGAAAGAAGGG 58.071 50.000 0.00 0.00 0.00 3.95
156 157 0.779997 ACTGCATGGGAAAGAAGGGT 59.220 50.000 0.00 0.00 0.00 4.34
157 158 1.147817 ACTGCATGGGAAAGAAGGGTT 59.852 47.619 0.00 0.00 0.00 4.11
158 159 1.547372 CTGCATGGGAAAGAAGGGTTG 59.453 52.381 0.00 0.00 0.00 3.77
159 160 0.897621 GCATGGGAAAGAAGGGTTGG 59.102 55.000 0.00 0.00 0.00 3.77
160 161 1.560505 CATGGGAAAGAAGGGTTGGG 58.439 55.000 0.00 0.00 0.00 4.12
161 162 0.252239 ATGGGAAAGAAGGGTTGGGC 60.252 55.000 0.00 0.00 0.00 5.36
162 163 1.609501 GGGAAAGAAGGGTTGGGCC 60.610 63.158 0.00 0.00 0.00 5.80
163 164 1.977009 GGAAAGAAGGGTTGGGCCG 60.977 63.158 0.00 0.00 38.44 6.13
164 165 1.228459 GAAAGAAGGGTTGGGCCGT 60.228 57.895 0.00 0.00 38.44 5.68
165 166 0.037160 GAAAGAAGGGTTGGGCCGTA 59.963 55.000 0.00 0.00 38.44 4.02
166 167 0.037734 AAAGAAGGGTTGGGCCGTAG 59.962 55.000 0.00 0.00 38.44 3.51
178 179 3.006728 CCGTAGGCCTGGTTGGGA 61.007 66.667 17.99 0.00 46.14 4.37
179 180 2.375345 CCGTAGGCCTGGTTGGGAT 61.375 63.158 17.99 0.00 46.14 3.85
180 181 1.153168 CGTAGGCCTGGTTGGGATG 60.153 63.158 17.99 0.00 36.00 3.51
181 182 1.622607 CGTAGGCCTGGTTGGGATGA 61.623 60.000 17.99 0.00 36.00 2.92
182 183 0.181350 GTAGGCCTGGTTGGGATGAG 59.819 60.000 17.99 0.00 36.00 2.90
183 184 0.044092 TAGGCCTGGTTGGGATGAGA 59.956 55.000 17.99 0.00 36.00 3.27
184 185 0.625683 AGGCCTGGTTGGGATGAGAT 60.626 55.000 3.11 0.00 36.00 2.75
185 186 0.466922 GGCCTGGTTGGGATGAGATG 60.467 60.000 0.00 0.00 36.00 2.90
186 187 1.105759 GCCTGGTTGGGATGAGATGC 61.106 60.000 0.00 0.00 36.00 3.91
187 188 0.816825 CCTGGTTGGGATGAGATGCG 60.817 60.000 0.00 0.00 0.00 4.73
188 189 1.442526 CTGGTTGGGATGAGATGCGC 61.443 60.000 0.00 0.00 0.00 6.09
189 190 2.537560 GGTTGGGATGAGATGCGCG 61.538 63.158 0.00 0.00 0.00 6.86
190 191 1.521457 GTTGGGATGAGATGCGCGA 60.521 57.895 12.10 0.00 0.00 5.87
191 192 1.521457 TTGGGATGAGATGCGCGAC 60.521 57.895 12.10 0.88 0.00 5.19
192 193 2.106938 GGGATGAGATGCGCGACA 59.893 61.111 12.10 8.22 0.00 4.35
193 194 1.953138 GGGATGAGATGCGCGACAG 60.953 63.158 12.10 0.00 0.00 3.51
194 195 1.953138 GGATGAGATGCGCGACAGG 60.953 63.158 12.10 0.00 0.00 4.00
195 196 1.953138 GATGAGATGCGCGACAGGG 60.953 63.158 12.10 0.00 0.00 4.45
196 197 3.451556 ATGAGATGCGCGACAGGGG 62.452 63.158 12.10 0.00 0.00 4.79
214 215 3.893763 CGGTCTCGCCTGCTCGAT 61.894 66.667 0.00 0.00 37.87 3.59
215 216 2.496817 GGTCTCGCCTGCTCGATT 59.503 61.111 0.00 0.00 37.87 3.34
216 217 1.880340 GGTCTCGCCTGCTCGATTG 60.880 63.158 0.00 0.00 37.87 2.67
217 218 1.139734 GTCTCGCCTGCTCGATTGA 59.860 57.895 0.00 0.00 37.87 2.57
218 219 0.458543 GTCTCGCCTGCTCGATTGAA 60.459 55.000 0.00 0.00 37.87 2.69
219 220 0.461548 TCTCGCCTGCTCGATTGAAT 59.538 50.000 0.00 0.00 37.87 2.57
220 221 0.857935 CTCGCCTGCTCGATTGAATC 59.142 55.000 0.00 0.00 37.87 2.52
232 233 2.906354 GATTGAATCGGTACCAGCAGT 58.094 47.619 13.54 0.45 0.00 4.40
233 234 2.851263 TTGAATCGGTACCAGCAGTT 57.149 45.000 13.54 0.00 0.00 3.16
234 235 2.851263 TGAATCGGTACCAGCAGTTT 57.149 45.000 13.54 0.00 0.00 2.66
235 236 2.695359 TGAATCGGTACCAGCAGTTTC 58.305 47.619 13.54 6.99 0.00 2.78
236 237 2.037902 TGAATCGGTACCAGCAGTTTCA 59.962 45.455 13.54 9.39 0.00 2.69
237 238 2.094762 ATCGGTACCAGCAGTTTCAC 57.905 50.000 13.54 0.00 0.00 3.18
238 239 1.045407 TCGGTACCAGCAGTTTCACT 58.955 50.000 13.54 0.00 0.00 3.41
239 240 1.414919 TCGGTACCAGCAGTTTCACTT 59.585 47.619 13.54 0.00 0.00 3.16
240 241 1.798813 CGGTACCAGCAGTTTCACTTC 59.201 52.381 13.54 0.00 0.00 3.01
241 242 2.805295 CGGTACCAGCAGTTTCACTTCA 60.805 50.000 13.54 0.00 0.00 3.02
242 243 2.548480 GGTACCAGCAGTTTCACTTCAC 59.452 50.000 7.15 0.00 0.00 3.18
243 244 2.418368 ACCAGCAGTTTCACTTCACA 57.582 45.000 0.00 0.00 0.00 3.58
244 245 2.292267 ACCAGCAGTTTCACTTCACAG 58.708 47.619 0.00 0.00 0.00 3.66
245 246 2.292267 CCAGCAGTTTCACTTCACAGT 58.708 47.619 0.00 0.00 0.00 3.55
253 254 3.100545 CACTTCACAGTGGCAACCT 57.899 52.632 0.00 0.00 46.10 3.50
254 255 0.947244 CACTTCACAGTGGCAACCTC 59.053 55.000 0.00 0.00 46.10 3.85
255 256 0.532862 ACTTCACAGTGGCAACCTCG 60.533 55.000 0.00 0.00 0.00 4.63
256 257 1.227823 TTCACAGTGGCAACCTCGG 60.228 57.895 0.00 0.00 0.00 4.63
257 258 1.978455 TTCACAGTGGCAACCTCGGT 61.978 55.000 0.00 0.00 0.00 4.69
258 259 2.111043 ACAGTGGCAACCTCGGTG 59.889 61.111 0.00 0.00 0.00 4.94
259 260 2.111043 CAGTGGCAACCTCGGTGT 59.889 61.111 0.00 0.00 0.00 4.16
260 261 1.369692 CAGTGGCAACCTCGGTGTA 59.630 57.895 0.00 0.00 0.00 2.90
261 262 0.250124 CAGTGGCAACCTCGGTGTAA 60.250 55.000 0.00 0.00 0.00 2.41
262 263 0.690762 AGTGGCAACCTCGGTGTAAT 59.309 50.000 0.00 0.00 0.00 1.89
263 264 1.073284 AGTGGCAACCTCGGTGTAATT 59.927 47.619 0.00 0.00 0.00 1.40
264 265 2.303600 AGTGGCAACCTCGGTGTAATTA 59.696 45.455 0.00 0.00 0.00 1.40
265 266 3.054655 AGTGGCAACCTCGGTGTAATTAT 60.055 43.478 0.00 0.00 0.00 1.28
266 267 3.311596 GTGGCAACCTCGGTGTAATTATC 59.688 47.826 0.00 0.00 0.00 1.75
267 268 3.055021 TGGCAACCTCGGTGTAATTATCA 60.055 43.478 0.00 0.00 0.00 2.15
268 269 3.942748 GGCAACCTCGGTGTAATTATCAA 59.057 43.478 0.00 0.00 0.00 2.57
269 270 4.201881 GGCAACCTCGGTGTAATTATCAAC 60.202 45.833 0.00 0.00 0.00 3.18
270 271 4.393680 GCAACCTCGGTGTAATTATCAACA 59.606 41.667 0.00 0.00 0.00 3.33
271 272 5.106475 GCAACCTCGGTGTAATTATCAACAA 60.106 40.000 0.00 0.00 0.00 2.83
272 273 6.311723 CAACCTCGGTGTAATTATCAACAAC 58.688 40.000 0.00 0.00 0.00 3.32
273 274 5.801380 ACCTCGGTGTAATTATCAACAACT 58.199 37.500 0.00 0.00 30.92 3.16
274 275 5.873164 ACCTCGGTGTAATTATCAACAACTC 59.127 40.000 0.00 0.00 30.92 3.01
275 276 5.293569 CCTCGGTGTAATTATCAACAACTCC 59.706 44.000 0.00 0.00 30.92 3.85
276 277 6.045072 TCGGTGTAATTATCAACAACTCCT 57.955 37.500 0.00 0.00 30.92 3.69
277 278 7.172868 TCGGTGTAATTATCAACAACTCCTA 57.827 36.000 0.00 0.00 30.92 2.94
278 279 7.037438 TCGGTGTAATTATCAACAACTCCTAC 58.963 38.462 0.00 0.00 30.92 3.18
279 280 7.039882 CGGTGTAATTATCAACAACTCCTACT 58.960 38.462 0.00 0.00 30.92 2.57
280 281 7.548075 CGGTGTAATTATCAACAACTCCTACTT 59.452 37.037 0.00 0.00 30.92 2.24
281 282 8.880750 GGTGTAATTATCAACAACTCCTACTTC 58.119 37.037 0.00 0.00 30.45 3.01
282 283 8.880750 GTGTAATTATCAACAACTCCTACTTCC 58.119 37.037 0.00 0.00 0.00 3.46
283 284 8.044908 TGTAATTATCAACAACTCCTACTTCCC 58.955 37.037 0.00 0.00 0.00 3.97
284 285 6.636454 ATTATCAACAACTCCTACTTCCCA 57.364 37.500 0.00 0.00 0.00 4.37
285 286 4.559862 ATCAACAACTCCTACTTCCCAG 57.440 45.455 0.00 0.00 0.00 4.45
286 287 3.314693 TCAACAACTCCTACTTCCCAGT 58.685 45.455 0.00 0.00 36.99 4.00
287 288 3.714798 TCAACAACTCCTACTTCCCAGTT 59.285 43.478 0.00 0.00 34.06 3.16
288 289 4.165372 TCAACAACTCCTACTTCCCAGTTT 59.835 41.667 0.00 0.00 34.06 2.66
289 290 4.790718 ACAACTCCTACTTCCCAGTTTT 57.209 40.909 0.00 0.00 34.06 2.43
290 291 4.715713 ACAACTCCTACTTCCCAGTTTTC 58.284 43.478 0.00 0.00 34.06 2.29
291 292 3.679824 ACTCCTACTTCCCAGTTTTCG 57.320 47.619 0.00 0.00 34.06 3.46
292 293 2.289506 ACTCCTACTTCCCAGTTTTCGC 60.290 50.000 0.00 0.00 34.06 4.70
293 294 1.076332 CCTACTTCCCAGTTTTCGCG 58.924 55.000 0.00 0.00 34.06 5.87
294 295 1.076332 CTACTTCCCAGTTTTCGCGG 58.924 55.000 6.13 0.00 34.06 6.46
295 296 0.680618 TACTTCCCAGTTTTCGCGGA 59.319 50.000 6.13 0.00 34.06 5.54
296 297 0.602905 ACTTCCCAGTTTTCGCGGAG 60.603 55.000 6.13 0.00 0.00 4.63
309 310 4.988065 CGGAGCTCGAGTTTTCCA 57.012 55.556 23.34 0.00 42.43 3.53
310 311 3.210857 CGGAGCTCGAGTTTTCCAA 57.789 52.632 23.34 0.00 42.43 3.53
311 312 0.790814 CGGAGCTCGAGTTTTCCAAC 59.209 55.000 23.34 4.71 42.43 3.77
312 313 1.605712 CGGAGCTCGAGTTTTCCAACT 60.606 52.381 23.34 8.58 46.64 3.16
321 322 2.835027 AGTTTTCCAACTCCGTGACTC 58.165 47.619 0.00 0.00 39.15 3.36
322 323 1.871676 GTTTTCCAACTCCGTGACTCC 59.128 52.381 0.00 0.00 0.00 3.85
323 324 1.124780 TTTCCAACTCCGTGACTCCA 58.875 50.000 0.00 0.00 0.00 3.86
324 325 0.391597 TTCCAACTCCGTGACTCCAC 59.608 55.000 0.00 0.00 39.86 4.02
325 326 1.004918 CCAACTCCGTGACTCCACC 60.005 63.158 0.00 0.00 40.12 4.61
326 327 1.372997 CAACTCCGTGACTCCACCG 60.373 63.158 0.00 0.00 40.12 4.94
327 328 1.529948 AACTCCGTGACTCCACCGA 60.530 57.895 0.00 0.00 40.12 4.69
328 329 1.111116 AACTCCGTGACTCCACCGAA 61.111 55.000 0.00 0.00 40.12 4.30
329 330 0.898789 ACTCCGTGACTCCACCGAAT 60.899 55.000 0.00 0.00 40.12 3.34
330 331 0.246635 CTCCGTGACTCCACCGAATT 59.753 55.000 0.00 0.00 40.12 2.17
331 332 0.682852 TCCGTGACTCCACCGAATTT 59.317 50.000 0.00 0.00 40.12 1.82
332 333 0.796312 CCGTGACTCCACCGAATTTG 59.204 55.000 0.00 0.00 40.12 2.32
333 334 0.165944 CGTGACTCCACCGAATTTGC 59.834 55.000 0.00 0.00 40.12 3.68
334 335 1.234821 GTGACTCCACCGAATTTGCA 58.765 50.000 0.00 0.00 37.33 4.08
335 336 1.069227 GTGACTCCACCGAATTTGCAC 60.069 52.381 0.00 0.00 37.33 4.57
336 337 0.165944 GACTCCACCGAATTTGCACG 59.834 55.000 0.00 0.00 0.00 5.34
337 338 1.154225 CTCCACCGAATTTGCACGC 60.154 57.895 0.00 0.00 0.00 5.34
338 339 1.851021 CTCCACCGAATTTGCACGCA 61.851 55.000 0.00 0.00 0.00 5.24
339 340 1.729131 CCACCGAATTTGCACGCAC 60.729 57.895 0.00 0.00 0.00 5.34
340 341 1.282570 CACCGAATTTGCACGCACT 59.717 52.632 0.00 0.00 0.00 4.40
341 342 0.998226 CACCGAATTTGCACGCACTG 60.998 55.000 0.00 0.00 0.00 3.66
342 343 1.163420 ACCGAATTTGCACGCACTGA 61.163 50.000 0.00 0.00 0.00 3.41
343 344 0.040514 CCGAATTTGCACGCACTGAA 60.041 50.000 0.00 0.00 0.00 3.02
344 345 1.401409 CCGAATTTGCACGCACTGAAT 60.401 47.619 0.00 0.00 0.00 2.57
345 346 1.906966 CGAATTTGCACGCACTGAATC 59.093 47.619 0.00 0.00 0.00 2.52
346 347 1.906966 GAATTTGCACGCACTGAATCG 59.093 47.619 0.00 0.00 0.00 3.34
347 348 0.454957 ATTTGCACGCACTGAATCGC 60.455 50.000 0.00 0.00 0.00 4.58
348 349 2.456594 TTTGCACGCACTGAATCGCC 62.457 55.000 0.00 0.00 0.00 5.54
349 350 3.422303 GCACGCACTGAATCGCCA 61.422 61.111 0.00 0.00 0.00 5.69
350 351 2.965147 GCACGCACTGAATCGCCAA 61.965 57.895 0.00 0.00 0.00 4.52
351 352 1.154413 CACGCACTGAATCGCCAAC 60.154 57.895 0.00 0.00 0.00 3.77
352 353 1.301716 ACGCACTGAATCGCCAACT 60.302 52.632 0.00 0.00 0.00 3.16
353 354 0.884704 ACGCACTGAATCGCCAACTT 60.885 50.000 0.00 0.00 0.00 2.66
354 355 0.179215 CGCACTGAATCGCCAACTTC 60.179 55.000 0.00 0.00 0.00 3.01
355 356 1.160137 GCACTGAATCGCCAACTTCT 58.840 50.000 0.00 0.00 0.00 2.85
356 357 1.129437 GCACTGAATCGCCAACTTCTC 59.871 52.381 0.00 0.00 0.00 2.87
357 358 2.693069 CACTGAATCGCCAACTTCTCT 58.307 47.619 0.00 0.00 0.00 3.10
358 359 2.670414 CACTGAATCGCCAACTTCTCTC 59.330 50.000 0.00 0.00 0.00 3.20
359 360 2.275318 CTGAATCGCCAACTTCTCTCC 58.725 52.381 0.00 0.00 0.00 3.71
360 361 1.066143 TGAATCGCCAACTTCTCTCCC 60.066 52.381 0.00 0.00 0.00 4.30
361 362 0.984230 AATCGCCAACTTCTCTCCCA 59.016 50.000 0.00 0.00 0.00 4.37
362 363 1.207791 ATCGCCAACTTCTCTCCCAT 58.792 50.000 0.00 0.00 0.00 4.00
363 364 1.860641 TCGCCAACTTCTCTCCCATA 58.139 50.000 0.00 0.00 0.00 2.74
364 365 2.184533 TCGCCAACTTCTCTCCCATAA 58.815 47.619 0.00 0.00 0.00 1.90
365 366 2.569853 TCGCCAACTTCTCTCCCATAAA 59.430 45.455 0.00 0.00 0.00 1.40
366 367 3.008594 TCGCCAACTTCTCTCCCATAAAA 59.991 43.478 0.00 0.00 0.00 1.52
367 368 3.127030 CGCCAACTTCTCTCCCATAAAAC 59.873 47.826 0.00 0.00 0.00 2.43
368 369 3.444034 GCCAACTTCTCTCCCATAAAACC 59.556 47.826 0.00 0.00 0.00 3.27
369 370 4.662278 CCAACTTCTCTCCCATAAAACCA 58.338 43.478 0.00 0.00 0.00 3.67
370 371 4.702131 CCAACTTCTCTCCCATAAAACCAG 59.298 45.833 0.00 0.00 0.00 4.00
371 372 4.576330 ACTTCTCTCCCATAAAACCAGG 57.424 45.455 0.00 0.00 0.00 4.45
372 373 4.175962 ACTTCTCTCCCATAAAACCAGGA 58.824 43.478 0.00 0.00 0.00 3.86
373 374 4.226168 ACTTCTCTCCCATAAAACCAGGAG 59.774 45.833 0.00 0.00 46.11 3.69
374 375 3.803340 TCTCTCCCATAAAACCAGGAGT 58.197 45.455 0.00 0.00 45.16 3.85
375 376 4.175962 TCTCTCCCATAAAACCAGGAGTT 58.824 43.478 0.00 0.00 45.16 3.01
376 377 4.019321 TCTCTCCCATAAAACCAGGAGTTG 60.019 45.833 0.00 0.85 45.16 3.16
386 387 3.217242 CAGGAGTTGGAGTGTTCGG 57.783 57.895 0.00 0.00 0.00 4.30
387 388 0.951040 CAGGAGTTGGAGTGTTCGGC 60.951 60.000 0.00 0.00 0.00 5.54
388 389 1.122019 AGGAGTTGGAGTGTTCGGCT 61.122 55.000 0.00 0.00 0.00 5.52
389 390 0.606604 GGAGTTGGAGTGTTCGGCTA 59.393 55.000 0.00 0.00 0.00 3.93
390 391 1.001633 GGAGTTGGAGTGTTCGGCTAA 59.998 52.381 0.00 0.00 0.00 3.09
391 392 2.338500 GAGTTGGAGTGTTCGGCTAAG 58.662 52.381 0.00 0.00 0.00 2.18
392 393 1.968493 AGTTGGAGTGTTCGGCTAAGA 59.032 47.619 0.00 0.00 0.00 2.10
393 394 2.567615 AGTTGGAGTGTTCGGCTAAGAT 59.432 45.455 0.00 0.00 0.00 2.40
394 395 2.930682 GTTGGAGTGTTCGGCTAAGATC 59.069 50.000 0.00 0.00 0.00 2.75
395 396 2.457598 TGGAGTGTTCGGCTAAGATCT 58.542 47.619 0.00 0.00 0.00 2.75
396 397 3.628008 TGGAGTGTTCGGCTAAGATCTA 58.372 45.455 0.00 0.00 0.00 1.98
397 398 3.632604 TGGAGTGTTCGGCTAAGATCTAG 59.367 47.826 0.00 0.00 0.00 2.43
398 399 3.884091 GGAGTGTTCGGCTAAGATCTAGA 59.116 47.826 0.00 0.00 0.00 2.43
399 400 4.521256 GGAGTGTTCGGCTAAGATCTAGAT 59.479 45.833 4.47 4.47 0.00 1.98
400 401 5.335348 GGAGTGTTCGGCTAAGATCTAGATC 60.335 48.000 22.92 22.92 38.09 2.75
401 402 4.214545 AGTGTTCGGCTAAGATCTAGATCG 59.785 45.833 23.77 13.63 42.48 3.69
402 403 3.502595 TGTTCGGCTAAGATCTAGATCGG 59.497 47.826 23.77 18.61 42.48 4.18
403 404 2.712709 TCGGCTAAGATCTAGATCGGG 58.287 52.381 23.77 18.32 42.48 5.14
404 405 2.305052 TCGGCTAAGATCTAGATCGGGA 59.695 50.000 23.77 13.63 42.48 5.14
405 406 2.680841 CGGCTAAGATCTAGATCGGGAG 59.319 54.545 23.77 21.23 42.48 4.30
406 407 3.692690 GGCTAAGATCTAGATCGGGAGT 58.307 50.000 23.77 12.27 42.48 3.85
407 408 4.083565 GGCTAAGATCTAGATCGGGAGTT 58.916 47.826 23.77 15.72 42.48 3.01
408 409 4.082463 GGCTAAGATCTAGATCGGGAGTTG 60.082 50.000 23.77 13.24 42.48 3.16
409 410 4.762765 GCTAAGATCTAGATCGGGAGTTGA 59.237 45.833 23.77 1.33 42.48 3.18
410 411 5.417580 GCTAAGATCTAGATCGGGAGTTGAT 59.582 44.000 23.77 3.62 42.48 2.57
411 412 5.720371 AAGATCTAGATCGGGAGTTGATG 57.280 43.478 23.77 0.00 42.48 3.07
412 413 4.085733 AGATCTAGATCGGGAGTTGATGG 58.914 47.826 23.77 0.00 42.48 3.51
413 414 3.595190 TCTAGATCGGGAGTTGATGGA 57.405 47.619 0.00 0.00 0.00 3.41
414 415 3.491342 TCTAGATCGGGAGTTGATGGAG 58.509 50.000 0.00 0.00 0.00 3.86
415 416 2.166907 AGATCGGGAGTTGATGGAGT 57.833 50.000 0.00 0.00 0.00 3.85
416 417 2.472029 AGATCGGGAGTTGATGGAGTT 58.528 47.619 0.00 0.00 0.00 3.01
417 418 2.169352 AGATCGGGAGTTGATGGAGTTG 59.831 50.000 0.00 0.00 0.00 3.16
418 419 0.613260 TCGGGAGTTGATGGAGTTGG 59.387 55.000 0.00 0.00 0.00 3.77
419 420 0.392998 CGGGAGTTGATGGAGTTGGG 60.393 60.000 0.00 0.00 0.00 4.12
420 421 0.991920 GGGAGTTGATGGAGTTGGGA 59.008 55.000 0.00 0.00 0.00 4.37
421 422 1.065126 GGGAGTTGATGGAGTTGGGAG 60.065 57.143 0.00 0.00 0.00 4.30
422 423 1.630878 GGAGTTGATGGAGTTGGGAGT 59.369 52.381 0.00 0.00 0.00 3.85
423 424 2.040412 GGAGTTGATGGAGTTGGGAGTT 59.960 50.000 0.00 0.00 0.00 3.01
424 425 3.077359 GAGTTGATGGAGTTGGGAGTTG 58.923 50.000 0.00 0.00 0.00 3.16
425 426 2.162681 GTTGATGGAGTTGGGAGTTGG 58.837 52.381 0.00 0.00 0.00 3.77
426 427 1.741028 TGATGGAGTTGGGAGTTGGA 58.259 50.000 0.00 0.00 0.00 3.53
427 428 1.630369 TGATGGAGTTGGGAGTTGGAG 59.370 52.381 0.00 0.00 0.00 3.86
428 429 0.995024 ATGGAGTTGGGAGTTGGAGG 59.005 55.000 0.00 0.00 0.00 4.30
429 430 1.133809 TGGAGTTGGGAGTTGGAGGG 61.134 60.000 0.00 0.00 0.00 4.30
430 431 1.002011 GAGTTGGGAGTTGGAGGGC 60.002 63.158 0.00 0.00 0.00 5.19
431 432 1.464198 AGTTGGGAGTTGGAGGGCT 60.464 57.895 0.00 0.00 0.00 5.19
432 433 1.002011 GTTGGGAGTTGGAGGGCTC 60.002 63.158 0.00 0.00 0.00 4.70
449 450 4.153957 CCTGAACAGGCCCTAGGT 57.846 61.111 8.29 0.00 42.44 3.08
450 451 3.317280 CCTGAACAGGCCCTAGGTA 57.683 57.895 8.29 0.00 42.44 3.08
451 452 1.807814 CCTGAACAGGCCCTAGGTAT 58.192 55.000 8.29 0.00 42.44 2.73
452 453 2.972348 CCTGAACAGGCCCTAGGTATA 58.028 52.381 8.29 0.00 42.44 1.47
453 454 2.900546 CCTGAACAGGCCCTAGGTATAG 59.099 54.545 8.29 0.00 42.44 1.31
454 455 3.577919 CTGAACAGGCCCTAGGTATAGT 58.422 50.000 8.29 0.00 0.00 2.12
455 456 3.967987 CTGAACAGGCCCTAGGTATAGTT 59.032 47.826 8.29 7.28 0.00 2.24
456 457 5.145564 CTGAACAGGCCCTAGGTATAGTTA 58.854 45.833 8.29 0.00 0.00 2.24
457 458 5.145564 TGAACAGGCCCTAGGTATAGTTAG 58.854 45.833 8.29 0.00 0.00 2.34
458 459 4.828875 ACAGGCCCTAGGTATAGTTAGT 57.171 45.455 8.29 0.00 0.00 2.24
459 460 5.153670 ACAGGCCCTAGGTATAGTTAGTT 57.846 43.478 8.29 0.00 0.00 2.24
460 461 6.285329 ACAGGCCCTAGGTATAGTTAGTTA 57.715 41.667 8.29 0.00 0.00 2.24
461 462 6.313324 ACAGGCCCTAGGTATAGTTAGTTAG 58.687 44.000 8.29 0.00 0.00 2.34
462 463 6.125949 ACAGGCCCTAGGTATAGTTAGTTAGT 60.126 42.308 8.29 0.00 0.00 2.24
463 464 6.781507 CAGGCCCTAGGTATAGTTAGTTAGTT 59.218 42.308 8.29 0.00 0.00 2.24
464 465 7.946776 CAGGCCCTAGGTATAGTTAGTTAGTTA 59.053 40.741 8.29 0.00 0.00 2.24
465 466 8.169393 AGGCCCTAGGTATAGTTAGTTAGTTAG 58.831 40.741 8.29 0.00 0.00 2.34
466 467 7.947332 GGCCCTAGGTATAGTTAGTTAGTTAGT 59.053 40.741 8.29 0.00 0.00 2.24
467 468 9.360901 GCCCTAGGTATAGTTAGTTAGTTAGTT 57.639 37.037 8.29 0.00 0.00 2.24
515 516 9.429359 GATAGATAGATGTGTGTTATTTCAGGG 57.571 37.037 0.00 0.00 0.00 4.45
552 553 4.087892 AGCCCAACTGCGCTCGAT 62.088 61.111 9.73 0.00 36.02 3.59
556 557 0.032678 CCCAACTGCGCTCGATATCT 59.967 55.000 9.73 0.00 0.00 1.98
618 619 0.592754 GCTCGTCTGACAGGTATCGC 60.593 60.000 8.73 0.00 0.00 4.58
633 634 6.097839 ACAGGTATCGCTAGAAAAGGATTACA 59.902 38.462 0.00 0.00 0.00 2.41
761 762 2.150051 GGGTGGGCCTAGGATCAGG 61.150 68.421 14.75 0.00 38.86 3.86
861 862 1.374378 TAAATGCGACGGCCGAACA 60.374 52.632 35.90 25.69 41.76 3.18
936 939 3.610669 CCTCTCCCAGGGCGATCG 61.611 72.222 11.69 11.69 38.91 3.69
1109 1115 0.179056 CCTAACCTACCGCCATGTGG 60.179 60.000 0.00 0.00 39.41 4.17
1217 1223 2.046892 ATGCAAGCGAACGAGCCT 60.047 55.556 0.00 0.00 38.01 4.58
1256 1262 4.940046 GCTGTCTCAAAAGATGATTCTGGA 59.060 41.667 0.00 0.00 37.44 3.86
1262 1268 2.267174 AAGATGATTCTGGATGCGGG 57.733 50.000 0.00 0.00 30.72 6.13
1291 1297 0.599204 GGCGAAGTTGAGGTGAACGA 60.599 55.000 0.00 0.00 0.00 3.85
1337 1343 1.611977 ACGAACACATCTCCAACTCGA 59.388 47.619 0.00 0.00 0.00 4.04
1341 1347 4.201920 CGAACACATCTCCAACTCGATCTA 60.202 45.833 0.00 0.00 0.00 1.98
1343 1349 3.381908 ACACATCTCCAACTCGATCTACC 59.618 47.826 0.00 0.00 0.00 3.18
1427 1434 3.448660 GCCCTCCTTTGTTATTGCAAGAT 59.551 43.478 4.94 0.00 0.00 2.40
1611 1619 2.638363 AGTTCAAGGGTAGTGGGAGTTC 59.362 50.000 0.00 0.00 0.00 3.01
1627 1635 2.719046 GAGTTCAAATTTGCGTTCGTGG 59.281 45.455 13.54 0.00 0.00 4.94
1656 1664 8.534954 AGGATGTGCTACTTAACTGTAATCTA 57.465 34.615 0.00 0.00 0.00 1.98
1686 1694 5.570205 TTGACTGGTGGAATAAGGTTACA 57.430 39.130 0.00 0.00 0.00 2.41
1807 1815 2.967397 CGGCCGACACTTGGTCTA 59.033 61.111 24.07 0.00 44.68 2.59
1828 1836 3.904136 ACTTTTGATTCGCTTGGTGAG 57.096 42.857 0.00 0.00 0.00 3.51
1962 2779 2.159226 GCTCGGTGAGTGCTGTAGTTAT 60.159 50.000 0.00 0.00 36.50 1.89
1997 2823 6.964370 TCATTTTGTTCGGTAGATAAAATGCG 59.036 34.615 17.20 0.00 42.77 4.73
2022 2848 7.890717 CGTTTTAATTTCCAAATTCATACGTGC 59.109 33.333 0.00 0.00 39.24 5.34
2057 2883 4.819630 GTCTGTTATGGTCCACTGTCAAAA 59.180 41.667 0.00 0.00 0.00 2.44
2090 2916 6.051717 GCCAGAAGCAGAAAATAGTAGATCA 58.948 40.000 0.00 0.00 42.97 2.92
2213 3039 4.531854 TGACAATGGGTGAGAAAGTTCAA 58.468 39.130 0.00 0.00 0.00 2.69
2229 3055 2.031919 AATGGCCGTCGCACAAGA 59.968 55.556 0.00 0.00 36.38 3.02
2344 3170 2.076863 GTCGGTTGAGAAGGTTCCATG 58.923 52.381 0.00 0.00 0.00 3.66
2509 3335 4.973168 AGCAAAGTGAAGAACCTGATGTA 58.027 39.130 0.00 0.00 0.00 2.29
2564 3390 6.773976 TTCTTTGGAGATGTTGTCACTTTT 57.226 33.333 0.00 0.00 0.00 2.27
2648 3474 7.058525 ACAATCATTTTCAGAGCATCATCCTA 58.941 34.615 0.00 0.00 37.82 2.94
2649 3475 7.013083 ACAATCATTTTCAGAGCATCATCCTAC 59.987 37.037 0.00 0.00 37.82 3.18
2693 3519 2.614779 CAGCAAGAGAGCTTCGAATGA 58.385 47.619 0.00 0.00 43.70 2.57
2816 3642 4.932200 GGAGTGTAGAAAGACATGTCCTTG 59.068 45.833 22.21 0.00 34.60 3.61
2861 3693 4.507710 ACATATTCGTTGCAGATCAGTGT 58.492 39.130 0.00 0.00 0.00 3.55
3124 3956 1.468914 GAGATTCGAACAAAGTGGGCC 59.531 52.381 0.00 0.00 0.00 5.80
3150 3982 9.280174 CAAACCATACTTTAGAGGTGTTTTCTA 57.720 33.333 0.00 0.00 33.93 2.10
3163 3995 4.702131 GGTGTTTTCTATGCCAAGATGACT 59.298 41.667 0.00 0.00 0.00 3.41
3193 4025 0.179062 GGAGCGAGAGTGCCAATCAT 60.179 55.000 0.00 0.00 34.65 2.45
3220 4052 0.990282 AGACATACATGCCCCCAGCT 60.990 55.000 0.00 0.00 44.23 4.24
3276 4108 1.250328 CTGCAATTTGACAGGGAGCA 58.750 50.000 0.00 0.00 0.00 4.26
3290 4122 1.759445 GGGAGCATGAAGAGAGCTACA 59.241 52.381 0.00 0.00 41.04 2.74
3317 4149 9.442047 AGGAGAAAAGAACTATGATTGTAAGTG 57.558 33.333 0.00 0.00 0.00 3.16
3324 4156 4.683832 ACTATGATTGTAAGTGAGCCGTC 58.316 43.478 0.00 0.00 0.00 4.79
3354 4186 2.159000 TCAATGCACACATGGCAAAACA 60.159 40.909 0.00 0.00 45.60 2.83
3357 4189 3.300852 TGCACACATGGCAAAACATAG 57.699 42.857 0.00 0.00 38.54 2.23
3408 4241 3.623060 TCTGTCAAACTGTGTTGCTCTTC 59.377 43.478 0.00 0.00 0.00 2.87
3410 4243 3.623060 TGTCAAACTGTGTTGCTCTTCTC 59.377 43.478 0.00 0.00 0.00 2.87
3411 4244 3.873952 GTCAAACTGTGTTGCTCTTCTCT 59.126 43.478 0.00 0.00 0.00 3.10
3447 4280 8.680903 CAGTGAGAAGAACAAATTTGGCTATAT 58.319 33.333 21.74 8.33 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.323178 ATGGCAAGAAGCTGGTGGAG 60.323 55.000 0.00 0.00 44.79 3.86
1 2 0.322816 GATGGCAAGAAGCTGGTGGA 60.323 55.000 0.00 0.00 44.79 4.02
2 3 1.651240 CGATGGCAAGAAGCTGGTGG 61.651 60.000 0.00 0.00 44.79 4.61
3 4 0.674581 TCGATGGCAAGAAGCTGGTG 60.675 55.000 0.00 0.00 44.79 4.17
4 5 0.254178 ATCGATGGCAAGAAGCTGGT 59.746 50.000 0.00 0.00 44.79 4.00
5 6 0.942962 GATCGATGGCAAGAAGCTGG 59.057 55.000 0.54 0.00 44.79 4.85
6 7 1.598132 CTGATCGATGGCAAGAAGCTG 59.402 52.381 0.54 0.00 44.79 4.24
7 8 1.474677 CCTGATCGATGGCAAGAAGCT 60.475 52.381 0.54 0.00 44.79 3.74
8 9 0.942962 CCTGATCGATGGCAAGAAGC 59.057 55.000 0.54 0.00 44.65 3.86
9 10 1.139654 TCCCTGATCGATGGCAAGAAG 59.860 52.381 0.54 0.00 0.00 2.85
10 11 1.139654 CTCCCTGATCGATGGCAAGAA 59.860 52.381 0.54 0.00 0.00 2.52
11 12 0.755079 CTCCCTGATCGATGGCAAGA 59.245 55.000 0.54 0.00 0.00 3.02
12 13 0.755079 TCTCCCTGATCGATGGCAAG 59.245 55.000 0.54 0.00 0.00 4.01
13 14 1.203237 TTCTCCCTGATCGATGGCAA 58.797 50.000 0.54 0.00 0.00 4.52
14 15 1.139654 CTTTCTCCCTGATCGATGGCA 59.860 52.381 0.54 0.00 0.00 4.92
15 16 1.876322 CTTTCTCCCTGATCGATGGC 58.124 55.000 0.54 0.00 0.00 4.40
16 17 1.139654 TGCTTTCTCCCTGATCGATGG 59.860 52.381 0.54 0.00 0.00 3.51
17 18 2.158986 AGTGCTTTCTCCCTGATCGATG 60.159 50.000 0.54 0.00 0.00 3.84
18 19 2.102252 GAGTGCTTTCTCCCTGATCGAT 59.898 50.000 0.00 0.00 0.00 3.59
19 20 1.478510 GAGTGCTTTCTCCCTGATCGA 59.521 52.381 0.00 0.00 0.00 3.59
20 21 1.480137 AGAGTGCTTTCTCCCTGATCG 59.520 52.381 0.00 0.00 35.28 3.69
21 22 2.235898 ACAGAGTGCTTTCTCCCTGATC 59.764 50.000 0.00 0.00 35.28 2.92
22 23 2.264455 ACAGAGTGCTTTCTCCCTGAT 58.736 47.619 0.00 0.00 35.28 2.90
23 24 1.722034 ACAGAGTGCTTTCTCCCTGA 58.278 50.000 0.00 0.00 35.28 3.86
24 25 2.421619 GAACAGAGTGCTTTCTCCCTG 58.578 52.381 0.00 0.00 35.28 4.45
25 26 1.001406 CGAACAGAGTGCTTTCTCCCT 59.999 52.381 0.00 0.00 35.28 4.20
26 27 1.433534 CGAACAGAGTGCTTTCTCCC 58.566 55.000 0.00 0.00 35.28 4.30
27 28 1.270358 ACCGAACAGAGTGCTTTCTCC 60.270 52.381 0.00 0.00 35.28 3.71
28 29 2.156343 ACCGAACAGAGTGCTTTCTC 57.844 50.000 0.00 0.00 34.96 2.87
29 30 3.321111 TCTTACCGAACAGAGTGCTTTCT 59.679 43.478 0.00 0.00 0.00 2.52
30 31 3.650139 TCTTACCGAACAGAGTGCTTTC 58.350 45.455 0.00 0.00 0.00 2.62
31 32 3.746045 TCTTACCGAACAGAGTGCTTT 57.254 42.857 0.00 0.00 0.00 3.51
32 33 3.963428 ATCTTACCGAACAGAGTGCTT 57.037 42.857 0.00 0.00 0.00 3.91
33 34 3.589988 CAATCTTACCGAACAGAGTGCT 58.410 45.455 0.00 0.00 29.15 4.40
34 35 3.999229 CAATCTTACCGAACAGAGTGC 57.001 47.619 0.00 0.00 29.15 4.40
35 36 3.589988 AGCAATCTTACCGAACAGAGTG 58.410 45.455 0.00 0.00 38.01 3.51
36 37 3.963428 AGCAATCTTACCGAACAGAGT 57.037 42.857 0.00 0.00 0.00 3.24
37 38 4.499183 AGAAGCAATCTTACCGAACAGAG 58.501 43.478 0.00 0.00 33.39 3.35
38 39 4.537135 AGAAGCAATCTTACCGAACAGA 57.463 40.909 0.00 0.00 33.39 3.41
39 40 4.670221 GCAAGAAGCAATCTTACCGAACAG 60.670 45.833 4.66 0.00 46.80 3.16
40 41 3.188460 GCAAGAAGCAATCTTACCGAACA 59.812 43.478 4.66 0.00 46.80 3.18
41 42 3.437049 AGCAAGAAGCAATCTTACCGAAC 59.563 43.478 4.66 0.00 46.80 3.95
42 43 3.674997 AGCAAGAAGCAATCTTACCGAA 58.325 40.909 4.66 0.00 46.80 4.30
43 44 3.262420 GAGCAAGAAGCAATCTTACCGA 58.738 45.455 4.66 0.00 46.80 4.69
44 45 2.029728 CGAGCAAGAAGCAATCTTACCG 59.970 50.000 4.66 5.51 46.80 4.02
45 46 2.223135 GCGAGCAAGAAGCAATCTTACC 60.223 50.000 4.66 0.80 46.80 2.85
46 47 2.416547 TGCGAGCAAGAAGCAATCTTAC 59.583 45.455 4.66 0.28 46.80 2.34
47 48 2.416547 GTGCGAGCAAGAAGCAATCTTA 59.583 45.455 0.00 0.00 46.80 2.10
54 55 2.734673 CCTCGTGCGAGCAAGAAGC 61.735 63.158 15.32 0.00 46.19 3.86
55 56 0.109272 TACCTCGTGCGAGCAAGAAG 60.109 55.000 15.32 10.82 40.69 2.85
56 57 0.109272 CTACCTCGTGCGAGCAAGAA 60.109 55.000 15.32 0.34 40.69 2.52
57 58 1.506718 CTACCTCGTGCGAGCAAGA 59.493 57.895 15.32 12.61 40.69 3.02
58 59 2.161486 GCTACCTCGTGCGAGCAAG 61.161 63.158 15.32 14.23 40.69 4.01
59 60 2.126071 GCTACCTCGTGCGAGCAA 60.126 61.111 15.32 5.26 40.69 3.91
66 67 4.554363 CCGGCTCGCTACCTCGTG 62.554 72.222 0.00 0.00 0.00 4.35
67 68 4.790962 TCCGGCTCGCTACCTCGT 62.791 66.667 0.00 0.00 0.00 4.18
68 69 3.471244 CTTCCGGCTCGCTACCTCG 62.471 68.421 0.00 0.00 0.00 4.63
69 70 2.413765 CTTCCGGCTCGCTACCTC 59.586 66.667 0.00 0.00 0.00 3.85
70 71 3.148279 CCTTCCGGCTCGCTACCT 61.148 66.667 0.00 0.00 0.00 3.08
80 81 2.024918 CGATTTGATGGCCTTCCGG 58.975 57.895 15.62 0.00 34.14 5.14
81 82 1.356624 GCGATTTGATGGCCTTCCG 59.643 57.895 15.62 12.30 34.14 4.30
87 88 0.379669 CACTGAGGCGATTTGATGGC 59.620 55.000 0.00 0.00 0.00 4.40
88 89 1.399440 CACACTGAGGCGATTTGATGG 59.601 52.381 0.00 0.00 0.00 3.51
89 90 2.079158 ACACACTGAGGCGATTTGATG 58.921 47.619 0.00 0.00 0.00 3.07
90 91 2.350522 GACACACTGAGGCGATTTGAT 58.649 47.619 0.00 0.00 0.00 2.57
91 92 1.608025 GGACACACTGAGGCGATTTGA 60.608 52.381 0.00 0.00 0.00 2.69
92 93 0.798776 GGACACACTGAGGCGATTTG 59.201 55.000 0.00 0.00 0.00 2.32
93 94 0.321653 GGGACACACTGAGGCGATTT 60.322 55.000 0.00 0.00 0.00 2.17
94 95 1.296715 GGGACACACTGAGGCGATT 59.703 57.895 0.00 0.00 0.00 3.34
95 96 1.913262 TGGGACACACTGAGGCGAT 60.913 57.895 0.00 0.00 0.00 4.58
96 97 2.523168 TGGGACACACTGAGGCGA 60.523 61.111 0.00 0.00 0.00 5.54
108 109 1.414550 GTAGCCTTCTCCAGATGGGAC 59.585 57.143 9.87 0.00 42.15 4.46
109 110 1.692762 GGTAGCCTTCTCCAGATGGGA 60.693 57.143 9.87 0.00 45.89 4.37
110 111 0.761802 GGTAGCCTTCTCCAGATGGG 59.238 60.000 9.87 2.21 39.14 4.00
111 112 1.500474 TGGTAGCCTTCTCCAGATGG 58.500 55.000 4.45 4.45 41.00 3.51
112 113 3.495806 GGATTGGTAGCCTTCTCCAGATG 60.496 52.174 0.00 0.00 32.63 2.90
113 114 2.708325 GGATTGGTAGCCTTCTCCAGAT 59.292 50.000 0.00 0.00 32.63 2.90
114 115 2.119495 GGATTGGTAGCCTTCTCCAGA 58.881 52.381 0.00 0.00 32.63 3.86
115 116 1.839994 TGGATTGGTAGCCTTCTCCAG 59.160 52.381 0.00 0.00 32.63 3.86
116 117 1.965414 TGGATTGGTAGCCTTCTCCA 58.035 50.000 0.00 0.00 0.00 3.86
117 118 3.017442 GTTTGGATTGGTAGCCTTCTCC 58.983 50.000 0.00 0.00 0.00 3.71
118 119 3.691609 CAGTTTGGATTGGTAGCCTTCTC 59.308 47.826 0.00 0.00 0.00 2.87
119 120 3.690460 CAGTTTGGATTGGTAGCCTTCT 58.310 45.455 0.00 0.00 0.00 2.85
120 121 2.164422 GCAGTTTGGATTGGTAGCCTTC 59.836 50.000 0.00 0.00 0.00 3.46
121 122 2.171003 GCAGTTTGGATTGGTAGCCTT 58.829 47.619 0.00 0.00 0.00 4.35
122 123 1.075374 TGCAGTTTGGATTGGTAGCCT 59.925 47.619 0.00 0.00 0.00 4.58
123 124 1.544724 TGCAGTTTGGATTGGTAGCC 58.455 50.000 0.00 0.00 0.00 3.93
124 125 2.159198 CCATGCAGTTTGGATTGGTAGC 60.159 50.000 0.00 0.00 36.26 3.58
125 126 2.428171 CCCATGCAGTTTGGATTGGTAG 59.572 50.000 6.39 0.00 36.26 3.18
126 127 2.042297 TCCCATGCAGTTTGGATTGGTA 59.958 45.455 6.39 0.00 33.59 3.25
127 128 1.203162 TCCCATGCAGTTTGGATTGGT 60.203 47.619 6.39 0.00 33.59 3.67
128 129 1.559368 TCCCATGCAGTTTGGATTGG 58.441 50.000 6.39 0.00 36.26 3.16
129 130 3.258872 TCTTTCCCATGCAGTTTGGATTG 59.741 43.478 6.39 0.00 36.26 2.67
130 131 3.509442 TCTTTCCCATGCAGTTTGGATT 58.491 40.909 6.39 0.00 36.26 3.01
131 132 3.173953 TCTTTCCCATGCAGTTTGGAT 57.826 42.857 6.39 0.00 36.26 3.41
132 133 2.673775 TCTTTCCCATGCAGTTTGGA 57.326 45.000 6.39 0.00 36.26 3.53
133 134 2.028748 CCTTCTTTCCCATGCAGTTTGG 60.029 50.000 0.00 0.00 0.00 3.28
134 135 2.028748 CCCTTCTTTCCCATGCAGTTTG 60.029 50.000 0.00 0.00 0.00 2.93
135 136 2.250924 CCCTTCTTTCCCATGCAGTTT 58.749 47.619 0.00 0.00 0.00 2.66
136 137 1.147817 ACCCTTCTTTCCCATGCAGTT 59.852 47.619 0.00 0.00 0.00 3.16
137 138 0.779997 ACCCTTCTTTCCCATGCAGT 59.220 50.000 0.00 0.00 0.00 4.40
138 139 1.547372 CAACCCTTCTTTCCCATGCAG 59.453 52.381 0.00 0.00 0.00 4.41
139 140 1.631405 CAACCCTTCTTTCCCATGCA 58.369 50.000 0.00 0.00 0.00 3.96
140 141 0.897621 CCAACCCTTCTTTCCCATGC 59.102 55.000 0.00 0.00 0.00 4.06
141 142 1.560505 CCCAACCCTTCTTTCCCATG 58.439 55.000 0.00 0.00 0.00 3.66
142 143 0.252239 GCCCAACCCTTCTTTCCCAT 60.252 55.000 0.00 0.00 0.00 4.00
143 144 1.155155 GCCCAACCCTTCTTTCCCA 59.845 57.895 0.00 0.00 0.00 4.37
144 145 1.609501 GGCCCAACCCTTCTTTCCC 60.610 63.158 0.00 0.00 0.00 3.97
145 146 1.977009 CGGCCCAACCCTTCTTTCC 60.977 63.158 0.00 0.00 33.26 3.13
146 147 0.037160 TACGGCCCAACCCTTCTTTC 59.963 55.000 0.00 0.00 33.26 2.62
147 148 0.037734 CTACGGCCCAACCCTTCTTT 59.962 55.000 0.00 0.00 33.26 2.52
148 149 1.683441 CTACGGCCCAACCCTTCTT 59.317 57.895 0.00 0.00 33.26 2.52
149 150 2.298661 CCTACGGCCCAACCCTTCT 61.299 63.158 0.00 0.00 33.26 2.85
150 151 2.271173 CCTACGGCCCAACCCTTC 59.729 66.667 0.00 0.00 33.26 3.46
151 152 4.043100 GCCTACGGCCCAACCCTT 62.043 66.667 0.00 0.00 44.06 3.95
161 162 2.375345 ATCCCAACCAGGCCTACGG 61.375 63.158 3.98 6.18 35.39 4.02
162 163 1.153168 CATCCCAACCAGGCCTACG 60.153 63.158 3.98 0.00 35.39 3.51
163 164 0.181350 CTCATCCCAACCAGGCCTAC 59.819 60.000 3.98 0.00 35.39 3.18
164 165 0.044092 TCTCATCCCAACCAGGCCTA 59.956 55.000 3.98 0.00 35.39 3.93
165 166 0.625683 ATCTCATCCCAACCAGGCCT 60.626 55.000 0.00 0.00 35.39 5.19
166 167 0.466922 CATCTCATCCCAACCAGGCC 60.467 60.000 0.00 0.00 35.39 5.19
167 168 1.105759 GCATCTCATCCCAACCAGGC 61.106 60.000 0.00 0.00 35.39 4.85
168 169 0.816825 CGCATCTCATCCCAACCAGG 60.817 60.000 0.00 0.00 37.03 4.45
169 170 1.442526 GCGCATCTCATCCCAACCAG 61.443 60.000 0.30 0.00 0.00 4.00
170 171 1.451927 GCGCATCTCATCCCAACCA 60.452 57.895 0.30 0.00 0.00 3.67
171 172 2.537560 CGCGCATCTCATCCCAACC 61.538 63.158 8.75 0.00 0.00 3.77
172 173 1.521457 TCGCGCATCTCATCCCAAC 60.521 57.895 8.75 0.00 0.00 3.77
173 174 1.521457 GTCGCGCATCTCATCCCAA 60.521 57.895 8.75 0.00 0.00 4.12
174 175 2.106938 GTCGCGCATCTCATCCCA 59.893 61.111 8.75 0.00 0.00 4.37
175 176 1.953138 CTGTCGCGCATCTCATCCC 60.953 63.158 8.75 0.00 0.00 3.85
176 177 1.953138 CCTGTCGCGCATCTCATCC 60.953 63.158 8.75 0.00 0.00 3.51
177 178 1.953138 CCCTGTCGCGCATCTCATC 60.953 63.158 8.75 0.00 0.00 2.92
178 179 2.107750 CCCTGTCGCGCATCTCAT 59.892 61.111 8.75 0.00 0.00 2.90
179 180 4.147449 CCCCTGTCGCGCATCTCA 62.147 66.667 8.75 0.00 0.00 3.27
197 198 3.417275 AATCGAGCAGGCGAGACCG 62.417 63.158 0.00 0.00 46.52 4.79
198 199 1.880340 CAATCGAGCAGGCGAGACC 60.880 63.158 0.00 0.00 44.26 3.85
199 200 0.458543 TTCAATCGAGCAGGCGAGAC 60.459 55.000 0.00 0.00 44.26 3.36
200 201 0.461548 ATTCAATCGAGCAGGCGAGA 59.538 50.000 0.00 0.00 44.26 4.04
201 202 0.857935 GATTCAATCGAGCAGGCGAG 59.142 55.000 0.00 0.00 44.26 5.03
202 203 2.977700 GATTCAATCGAGCAGGCGA 58.022 52.632 0.00 0.00 45.22 5.54
212 213 2.906354 ACTGCTGGTACCGATTCAATC 58.094 47.619 7.57 0.00 0.00 2.67
213 214 3.350219 AACTGCTGGTACCGATTCAAT 57.650 42.857 7.57 0.00 0.00 2.57
214 215 2.851263 AACTGCTGGTACCGATTCAA 57.149 45.000 7.57 0.00 0.00 2.69
215 216 2.037902 TGAAACTGCTGGTACCGATTCA 59.962 45.455 7.57 6.76 0.00 2.57
216 217 2.415512 GTGAAACTGCTGGTACCGATTC 59.584 50.000 7.57 4.19 0.00 2.52
217 218 2.423577 GTGAAACTGCTGGTACCGATT 58.576 47.619 7.57 0.00 0.00 3.34
218 219 2.094762 GTGAAACTGCTGGTACCGAT 57.905 50.000 7.57 0.00 0.00 4.18
219 220 3.599412 GTGAAACTGCTGGTACCGA 57.401 52.632 7.57 0.00 0.00 4.69
231 232 2.479560 GGTTGCCACTGTGAAGTGAAAC 60.480 50.000 9.86 10.43 42.02 2.78
232 233 1.748493 GGTTGCCACTGTGAAGTGAAA 59.252 47.619 9.86 0.00 42.02 2.69
233 234 1.064758 AGGTTGCCACTGTGAAGTGAA 60.065 47.619 9.86 0.00 42.02 3.18
234 235 0.546122 AGGTTGCCACTGTGAAGTGA 59.454 50.000 9.86 0.00 42.02 3.41
235 236 0.947244 GAGGTTGCCACTGTGAAGTG 59.053 55.000 9.86 0.00 39.37 3.16
236 237 0.532862 CGAGGTTGCCACTGTGAAGT 60.533 55.000 9.86 0.00 0.00 3.01
237 238 1.230635 CCGAGGTTGCCACTGTGAAG 61.231 60.000 9.86 0.00 0.00 3.02
238 239 1.227823 CCGAGGTTGCCACTGTGAA 60.228 57.895 9.86 0.00 0.00 3.18
239 240 2.425592 CCGAGGTTGCCACTGTGA 59.574 61.111 9.86 0.00 0.00 3.58
240 241 2.111043 ACCGAGGTTGCCACTGTG 59.889 61.111 0.00 0.00 0.00 3.66
241 242 1.404479 TACACCGAGGTTGCCACTGT 61.404 55.000 0.00 0.00 0.00 3.55
242 243 0.250124 TTACACCGAGGTTGCCACTG 60.250 55.000 0.00 0.00 0.00 3.66
243 244 0.690762 ATTACACCGAGGTTGCCACT 59.309 50.000 0.00 0.00 0.00 4.00
244 245 1.530323 AATTACACCGAGGTTGCCAC 58.470 50.000 0.00 0.00 0.00 5.01
245 246 3.055021 TGATAATTACACCGAGGTTGCCA 60.055 43.478 0.00 0.00 0.00 4.92
246 247 3.537580 TGATAATTACACCGAGGTTGCC 58.462 45.455 0.00 0.00 0.00 4.52
247 248 4.393680 TGTTGATAATTACACCGAGGTTGC 59.606 41.667 0.00 0.00 0.00 4.17
248 249 6.148811 AGTTGTTGATAATTACACCGAGGTTG 59.851 38.462 0.00 0.00 0.00 3.77
249 250 6.235664 AGTTGTTGATAATTACACCGAGGTT 58.764 36.000 0.00 0.00 0.00 3.50
250 251 5.801380 AGTTGTTGATAATTACACCGAGGT 58.199 37.500 0.00 0.00 0.00 3.85
251 252 5.293569 GGAGTTGTTGATAATTACACCGAGG 59.706 44.000 0.00 0.00 0.00 4.63
252 253 6.106673 AGGAGTTGTTGATAATTACACCGAG 58.893 40.000 0.00 0.00 0.00 4.63
253 254 6.045072 AGGAGTTGTTGATAATTACACCGA 57.955 37.500 0.00 0.00 0.00 4.69
254 255 7.039882 AGTAGGAGTTGTTGATAATTACACCG 58.960 38.462 0.00 0.00 0.00 4.94
255 256 8.788325 AAGTAGGAGTTGTTGATAATTACACC 57.212 34.615 0.00 0.00 0.00 4.16
256 257 8.880750 GGAAGTAGGAGTTGTTGATAATTACAC 58.119 37.037 0.00 0.00 0.00 2.90
257 258 8.044908 GGGAAGTAGGAGTTGTTGATAATTACA 58.955 37.037 0.00 0.00 0.00 2.41
258 259 8.044908 TGGGAAGTAGGAGTTGTTGATAATTAC 58.955 37.037 0.00 0.00 0.00 1.89
259 260 8.153221 TGGGAAGTAGGAGTTGTTGATAATTA 57.847 34.615 0.00 0.00 0.00 1.40
260 261 7.027874 TGGGAAGTAGGAGTTGTTGATAATT 57.972 36.000 0.00 0.00 0.00 1.40
261 262 6.215636 ACTGGGAAGTAGGAGTTGTTGATAAT 59.784 38.462 0.00 0.00 0.00 1.28
262 263 5.546499 ACTGGGAAGTAGGAGTTGTTGATAA 59.454 40.000 0.00 0.00 0.00 1.75
263 264 5.091552 ACTGGGAAGTAGGAGTTGTTGATA 58.908 41.667 0.00 0.00 0.00 2.15
264 265 3.910627 ACTGGGAAGTAGGAGTTGTTGAT 59.089 43.478 0.00 0.00 0.00 2.57
265 266 3.314693 ACTGGGAAGTAGGAGTTGTTGA 58.685 45.455 0.00 0.00 0.00 3.18
266 267 3.771577 ACTGGGAAGTAGGAGTTGTTG 57.228 47.619 0.00 0.00 0.00 3.33
267 268 4.790718 AAACTGGGAAGTAGGAGTTGTT 57.209 40.909 0.00 0.00 0.00 2.83
268 269 4.715713 GAAAACTGGGAAGTAGGAGTTGT 58.284 43.478 0.00 0.00 0.00 3.32
269 270 3.746492 CGAAAACTGGGAAGTAGGAGTTG 59.254 47.826 0.00 0.00 0.00 3.16
270 271 3.806157 GCGAAAACTGGGAAGTAGGAGTT 60.806 47.826 0.00 0.00 0.00 3.01
271 272 2.289506 GCGAAAACTGGGAAGTAGGAGT 60.290 50.000 0.00 0.00 0.00 3.85
272 273 2.347731 GCGAAAACTGGGAAGTAGGAG 58.652 52.381 0.00 0.00 0.00 3.69
273 274 1.337447 CGCGAAAACTGGGAAGTAGGA 60.337 52.381 0.00 0.00 0.00 2.94
274 275 1.076332 CGCGAAAACTGGGAAGTAGG 58.924 55.000 0.00 0.00 0.00 3.18
275 276 1.076332 CCGCGAAAACTGGGAAGTAG 58.924 55.000 8.23 0.00 0.00 2.57
276 277 0.680618 TCCGCGAAAACTGGGAAGTA 59.319 50.000 8.23 0.00 0.00 2.24
277 278 0.602905 CTCCGCGAAAACTGGGAAGT 60.603 55.000 8.23 0.00 0.00 3.01
278 279 1.912371 GCTCCGCGAAAACTGGGAAG 61.912 60.000 8.23 0.00 0.00 3.46
279 280 1.964373 GCTCCGCGAAAACTGGGAA 60.964 57.895 8.23 0.00 0.00 3.97
280 281 2.358247 GCTCCGCGAAAACTGGGA 60.358 61.111 8.23 0.00 0.00 4.37
281 282 2.358737 AGCTCCGCGAAAACTGGG 60.359 61.111 8.23 0.00 0.00 4.45
282 283 2.730672 CGAGCTCCGCGAAAACTGG 61.731 63.158 8.23 0.00 0.00 4.00
283 284 1.678269 CTCGAGCTCCGCGAAAACTG 61.678 60.000 8.23 0.00 35.05 3.16
284 285 1.444553 CTCGAGCTCCGCGAAAACT 60.445 57.895 8.23 0.00 35.05 2.66
285 286 1.282930 AACTCGAGCTCCGCGAAAAC 61.283 55.000 13.61 0.00 35.05 2.43
286 287 0.599204 AAACTCGAGCTCCGCGAAAA 60.599 50.000 13.61 0.00 35.05 2.29
287 288 0.599204 AAAACTCGAGCTCCGCGAAA 60.599 50.000 13.61 0.00 35.05 3.46
288 289 1.006571 AAAACTCGAGCTCCGCGAA 60.007 52.632 13.61 0.00 35.05 4.70
289 290 1.443872 GAAAACTCGAGCTCCGCGA 60.444 57.895 13.61 1.48 38.37 5.87
290 291 2.445438 GGAAAACTCGAGCTCCGCG 61.445 63.158 13.61 0.00 38.37 6.46
291 292 0.949105 TTGGAAAACTCGAGCTCCGC 60.949 55.000 13.61 0.00 38.37 5.54
292 293 0.790814 GTTGGAAAACTCGAGCTCCG 59.209 55.000 13.61 3.57 40.25 4.63
293 294 2.070028 GAGTTGGAAAACTCGAGCTCC 58.930 52.381 13.61 16.19 39.66 4.70
300 301 2.801111 GAGTCACGGAGTTGGAAAACTC 59.199 50.000 9.60 9.60 41.61 3.01
301 302 2.484947 GGAGTCACGGAGTTGGAAAACT 60.485 50.000 0.00 0.00 41.61 2.66
302 303 1.871676 GGAGTCACGGAGTTGGAAAAC 59.128 52.381 0.00 0.00 41.61 2.43
303 304 1.487142 TGGAGTCACGGAGTTGGAAAA 59.513 47.619 0.00 0.00 41.61 2.29
304 305 1.124780 TGGAGTCACGGAGTTGGAAA 58.875 50.000 0.00 0.00 41.61 3.13
305 306 0.391597 GTGGAGTCACGGAGTTGGAA 59.608 55.000 0.00 0.00 41.61 3.53
306 307 1.469335 GGTGGAGTCACGGAGTTGGA 61.469 60.000 0.00 0.00 41.61 3.53
307 308 1.004918 GGTGGAGTCACGGAGTTGG 60.005 63.158 0.00 0.00 41.61 3.77
308 309 1.372997 CGGTGGAGTCACGGAGTTG 60.373 63.158 0.00 0.00 41.61 3.16
309 310 1.529948 TCGGTGGAGTCACGGAGTT 60.530 57.895 3.26 0.00 44.62 3.01
310 311 2.114625 TCGGTGGAGTCACGGAGT 59.885 61.111 3.26 0.00 44.62 3.85
312 313 0.682852 AAATTCGGTGGAGTCACGGA 59.317 50.000 3.26 3.26 46.71 4.69
313 314 0.796312 CAAATTCGGTGGAGTCACGG 59.204 55.000 0.00 0.00 44.50 4.94
314 315 0.165944 GCAAATTCGGTGGAGTCACG 59.834 55.000 0.00 0.00 44.50 4.35
315 316 1.069227 GTGCAAATTCGGTGGAGTCAC 60.069 52.381 0.00 0.00 42.91 3.67
316 317 1.234821 GTGCAAATTCGGTGGAGTCA 58.765 50.000 0.00 0.00 0.00 3.41
317 318 0.165944 CGTGCAAATTCGGTGGAGTC 59.834 55.000 0.00 0.00 0.00 3.36
318 319 1.852067 GCGTGCAAATTCGGTGGAGT 61.852 55.000 0.00 0.00 0.00 3.85
319 320 1.154225 GCGTGCAAATTCGGTGGAG 60.154 57.895 0.00 0.00 0.00 3.86
320 321 1.894282 TGCGTGCAAATTCGGTGGA 60.894 52.632 0.00 0.00 0.00 4.02
321 322 1.729131 GTGCGTGCAAATTCGGTGG 60.729 57.895 0.00 0.00 0.00 4.61
322 323 0.998226 CAGTGCGTGCAAATTCGGTG 60.998 55.000 0.00 0.00 0.00 4.94
323 324 1.163420 TCAGTGCGTGCAAATTCGGT 61.163 50.000 0.00 0.00 0.00 4.69
324 325 0.040514 TTCAGTGCGTGCAAATTCGG 60.041 50.000 0.00 0.00 0.00 4.30
325 326 1.906966 GATTCAGTGCGTGCAAATTCG 59.093 47.619 0.00 0.00 0.00 3.34
326 327 1.906966 CGATTCAGTGCGTGCAAATTC 59.093 47.619 0.00 0.00 0.00 2.17
327 328 1.967762 CGATTCAGTGCGTGCAAATT 58.032 45.000 0.00 0.00 0.00 1.82
328 329 0.454957 GCGATTCAGTGCGTGCAAAT 60.455 50.000 0.00 0.00 0.00 2.32
329 330 1.082169 GCGATTCAGTGCGTGCAAA 60.082 52.632 0.00 0.00 0.00 3.68
330 331 2.555782 GCGATTCAGTGCGTGCAA 59.444 55.556 0.00 0.00 0.00 4.08
331 332 3.422303 GGCGATTCAGTGCGTGCA 61.422 61.111 0.00 0.00 0.00 4.57
332 333 2.965147 TTGGCGATTCAGTGCGTGC 61.965 57.895 0.00 0.00 0.00 5.34
333 334 1.154413 GTTGGCGATTCAGTGCGTG 60.154 57.895 0.00 0.00 0.00 5.34
334 335 0.884704 AAGTTGGCGATTCAGTGCGT 60.885 50.000 0.00 0.00 0.00 5.24
335 336 0.179215 GAAGTTGGCGATTCAGTGCG 60.179 55.000 0.00 0.00 0.00 5.34
336 337 1.129437 GAGAAGTTGGCGATTCAGTGC 59.871 52.381 0.00 0.00 0.00 4.40
337 338 2.670414 GAGAGAAGTTGGCGATTCAGTG 59.330 50.000 0.00 0.00 0.00 3.66
338 339 2.354203 GGAGAGAAGTTGGCGATTCAGT 60.354 50.000 0.00 0.00 0.00 3.41
339 340 2.275318 GGAGAGAAGTTGGCGATTCAG 58.725 52.381 0.00 0.00 0.00 3.02
340 341 1.066143 GGGAGAGAAGTTGGCGATTCA 60.066 52.381 0.00 0.00 0.00 2.57
341 342 1.066143 TGGGAGAGAAGTTGGCGATTC 60.066 52.381 0.00 0.00 0.00 2.52
342 343 0.984230 TGGGAGAGAAGTTGGCGATT 59.016 50.000 0.00 0.00 0.00 3.34
343 344 1.207791 ATGGGAGAGAAGTTGGCGAT 58.792 50.000 0.00 0.00 0.00 4.58
344 345 1.860641 TATGGGAGAGAAGTTGGCGA 58.139 50.000 0.00 0.00 0.00 5.54
345 346 2.691409 TTATGGGAGAGAAGTTGGCG 57.309 50.000 0.00 0.00 0.00 5.69
346 347 3.444034 GGTTTTATGGGAGAGAAGTTGGC 59.556 47.826 0.00 0.00 0.00 4.52
347 348 4.662278 TGGTTTTATGGGAGAGAAGTTGG 58.338 43.478 0.00 0.00 0.00 3.77
348 349 4.702131 CCTGGTTTTATGGGAGAGAAGTTG 59.298 45.833 0.00 0.00 0.00 3.16
349 350 4.601857 TCCTGGTTTTATGGGAGAGAAGTT 59.398 41.667 0.00 0.00 0.00 2.66
350 351 4.175962 TCCTGGTTTTATGGGAGAGAAGT 58.824 43.478 0.00 0.00 0.00 3.01
351 352 4.226168 ACTCCTGGTTTTATGGGAGAGAAG 59.774 45.833 13.78 0.00 45.79 2.85
352 353 4.175962 ACTCCTGGTTTTATGGGAGAGAA 58.824 43.478 13.78 0.00 45.79 2.87
353 354 3.803340 ACTCCTGGTTTTATGGGAGAGA 58.197 45.455 13.78 0.00 45.79 3.10
354 355 4.265073 CAACTCCTGGTTTTATGGGAGAG 58.735 47.826 13.78 3.53 45.79 3.20
355 356 3.010138 CCAACTCCTGGTTTTATGGGAGA 59.990 47.826 13.78 0.00 45.79 3.71
356 357 3.010138 TCCAACTCCTGGTTTTATGGGAG 59.990 47.826 6.33 6.33 46.51 4.30
357 358 2.990284 TCCAACTCCTGGTTTTATGGGA 59.010 45.455 0.00 0.00 46.51 4.37
358 359 3.245264 ACTCCAACTCCTGGTTTTATGGG 60.245 47.826 0.00 0.00 46.51 4.00
359 360 3.758554 CACTCCAACTCCTGGTTTTATGG 59.241 47.826 0.00 0.00 46.51 2.74
360 361 4.398319 ACACTCCAACTCCTGGTTTTATG 58.602 43.478 0.00 0.00 46.51 1.90
361 362 4.724279 ACACTCCAACTCCTGGTTTTAT 57.276 40.909 0.00 0.00 46.51 1.40
362 363 4.457466 GAACACTCCAACTCCTGGTTTTA 58.543 43.478 0.00 0.00 46.51 1.52
363 364 3.288092 GAACACTCCAACTCCTGGTTTT 58.712 45.455 0.00 0.00 46.51 2.43
364 365 2.745152 CGAACACTCCAACTCCTGGTTT 60.745 50.000 0.00 0.00 46.51 3.27
365 366 1.202651 CGAACACTCCAACTCCTGGTT 60.203 52.381 0.00 0.00 46.51 3.67
366 367 0.393077 CGAACACTCCAACTCCTGGT 59.607 55.000 0.00 0.00 46.51 4.00
368 369 0.951040 GCCGAACACTCCAACTCCTG 60.951 60.000 0.00 0.00 0.00 3.86
369 370 1.122019 AGCCGAACACTCCAACTCCT 61.122 55.000 0.00 0.00 0.00 3.69
370 371 0.606604 TAGCCGAACACTCCAACTCC 59.393 55.000 0.00 0.00 0.00 3.85
371 372 2.029290 TCTTAGCCGAACACTCCAACTC 60.029 50.000 0.00 0.00 0.00 3.01
372 373 1.968493 TCTTAGCCGAACACTCCAACT 59.032 47.619 0.00 0.00 0.00 3.16
373 374 2.450609 TCTTAGCCGAACACTCCAAC 57.549 50.000 0.00 0.00 0.00 3.77
374 375 2.832129 AGATCTTAGCCGAACACTCCAA 59.168 45.455 0.00 0.00 0.00 3.53
375 376 2.457598 AGATCTTAGCCGAACACTCCA 58.542 47.619 0.00 0.00 0.00 3.86
376 377 3.884091 TCTAGATCTTAGCCGAACACTCC 59.116 47.826 0.00 0.00 0.00 3.85
377 378 5.615984 CGATCTAGATCTTAGCCGAACACTC 60.616 48.000 26.29 0.60 35.72 3.51
378 379 4.214545 CGATCTAGATCTTAGCCGAACACT 59.785 45.833 26.29 0.00 35.72 3.55
379 380 4.468643 CGATCTAGATCTTAGCCGAACAC 58.531 47.826 26.29 0.86 35.72 3.32
380 381 3.502595 CCGATCTAGATCTTAGCCGAACA 59.497 47.826 26.29 0.00 35.72 3.18
381 382 3.119779 CCCGATCTAGATCTTAGCCGAAC 60.120 52.174 26.29 1.52 35.72 3.95
382 383 3.082548 CCCGATCTAGATCTTAGCCGAA 58.917 50.000 26.29 0.00 35.72 4.30
383 384 2.305052 TCCCGATCTAGATCTTAGCCGA 59.695 50.000 26.29 11.83 35.72 5.54
384 385 2.680841 CTCCCGATCTAGATCTTAGCCG 59.319 54.545 26.29 14.83 35.72 5.52
385 386 3.692690 ACTCCCGATCTAGATCTTAGCC 58.307 50.000 26.29 4.23 35.72 3.93
386 387 4.762765 TCAACTCCCGATCTAGATCTTAGC 59.237 45.833 26.29 4.91 35.72 3.09
387 388 6.127758 CCATCAACTCCCGATCTAGATCTTAG 60.128 46.154 26.29 21.37 35.72 2.18
388 389 5.712446 CCATCAACTCCCGATCTAGATCTTA 59.288 44.000 26.29 12.91 35.72 2.10
389 390 4.526262 CCATCAACTCCCGATCTAGATCTT 59.474 45.833 26.29 13.28 35.72 2.40
390 391 4.085733 CCATCAACTCCCGATCTAGATCT 58.914 47.826 26.29 8.19 35.72 2.75
391 392 4.082845 TCCATCAACTCCCGATCTAGATC 58.917 47.826 20.93 20.93 34.56 2.75
392 393 4.085733 CTCCATCAACTCCCGATCTAGAT 58.914 47.826 4.47 4.47 0.00 1.98
393 394 3.117474 ACTCCATCAACTCCCGATCTAGA 60.117 47.826 0.00 0.00 0.00 2.43
394 395 3.226777 ACTCCATCAACTCCCGATCTAG 58.773 50.000 0.00 0.00 0.00 2.43
395 396 3.314307 ACTCCATCAACTCCCGATCTA 57.686 47.619 0.00 0.00 0.00 1.98
396 397 2.166907 ACTCCATCAACTCCCGATCT 57.833 50.000 0.00 0.00 0.00 2.75
397 398 2.555199 CAACTCCATCAACTCCCGATC 58.445 52.381 0.00 0.00 0.00 3.69
398 399 1.210478 CCAACTCCATCAACTCCCGAT 59.790 52.381 0.00 0.00 0.00 4.18
399 400 0.613260 CCAACTCCATCAACTCCCGA 59.387 55.000 0.00 0.00 0.00 5.14
400 401 0.392998 CCCAACTCCATCAACTCCCG 60.393 60.000 0.00 0.00 0.00 5.14
401 402 0.991920 TCCCAACTCCATCAACTCCC 59.008 55.000 0.00 0.00 0.00 4.30
402 403 1.630878 ACTCCCAACTCCATCAACTCC 59.369 52.381 0.00 0.00 0.00 3.85
403 404 3.077359 CAACTCCCAACTCCATCAACTC 58.923 50.000 0.00 0.00 0.00 3.01
404 405 2.224867 CCAACTCCCAACTCCATCAACT 60.225 50.000 0.00 0.00 0.00 3.16
405 406 2.162681 CCAACTCCCAACTCCATCAAC 58.837 52.381 0.00 0.00 0.00 3.18
406 407 2.040278 CTCCAACTCCCAACTCCATCAA 59.960 50.000 0.00 0.00 0.00 2.57
407 408 1.630369 CTCCAACTCCCAACTCCATCA 59.370 52.381 0.00 0.00 0.00 3.07
408 409 1.065126 CCTCCAACTCCCAACTCCATC 60.065 57.143 0.00 0.00 0.00 3.51
409 410 0.995024 CCTCCAACTCCCAACTCCAT 59.005 55.000 0.00 0.00 0.00 3.41
410 411 1.133809 CCCTCCAACTCCCAACTCCA 61.134 60.000 0.00 0.00 0.00 3.86
411 412 1.685820 CCCTCCAACTCCCAACTCC 59.314 63.158 0.00 0.00 0.00 3.85
412 413 1.002011 GCCCTCCAACTCCCAACTC 60.002 63.158 0.00 0.00 0.00 3.01
413 414 1.464198 AGCCCTCCAACTCCCAACT 60.464 57.895 0.00 0.00 0.00 3.16
414 415 1.002011 GAGCCCTCCAACTCCCAAC 60.002 63.158 0.00 0.00 0.00 3.77
415 416 3.495729 GAGCCCTCCAACTCCCAA 58.504 61.111 0.00 0.00 0.00 4.12
425 426 2.270527 GCCTGTTCAGGAGCCCTC 59.729 66.667 21.32 0.18 0.00 4.30
426 427 3.334054 GGCCTGTTCAGGAGCCCT 61.334 66.667 21.32 0.00 39.60 5.19
428 429 1.977293 CTAGGGCCTGTTCAGGAGCC 61.977 65.000 18.53 15.26 44.99 4.70
429 430 1.524482 CTAGGGCCTGTTCAGGAGC 59.476 63.158 18.53 7.62 0.00 4.70
430 431 0.618968 ACCTAGGGCCTGTTCAGGAG 60.619 60.000 23.91 8.54 0.00 3.69
431 432 0.714180 TACCTAGGGCCTGTTCAGGA 59.286 55.000 23.91 7.43 0.00 3.86
432 433 1.807814 ATACCTAGGGCCTGTTCAGG 58.192 55.000 18.53 17.62 0.00 3.86
433 434 3.577919 ACTATACCTAGGGCCTGTTCAG 58.422 50.000 18.53 4.99 0.00 3.02
434 435 3.700863 ACTATACCTAGGGCCTGTTCA 57.299 47.619 18.53 0.00 0.00 3.18
435 436 5.146298 ACTAACTATACCTAGGGCCTGTTC 58.854 45.833 18.53 0.00 0.00 3.18
436 437 5.153670 ACTAACTATACCTAGGGCCTGTT 57.846 43.478 18.53 12.26 0.00 3.16
437 438 4.828875 ACTAACTATACCTAGGGCCTGT 57.171 45.455 18.53 9.27 0.00 4.00
438 439 6.313324 ACTAACTAACTATACCTAGGGCCTG 58.687 44.000 18.53 2.03 0.00 4.85
439 440 6.542795 ACTAACTAACTATACCTAGGGCCT 57.457 41.667 12.58 12.58 0.00 5.19
440 441 7.947332 ACTAACTAACTAACTATACCTAGGGCC 59.053 40.741 14.81 0.00 0.00 5.80
441 442 8.932434 ACTAACTAACTAACTATACCTAGGGC 57.068 38.462 14.81 0.00 0.00 5.19
489 490 9.429359 CCCTGAAATAACACACATCTATCTATC 57.571 37.037 0.00 0.00 0.00 2.08
490 491 9.159254 TCCCTGAAATAACACACATCTATCTAT 57.841 33.333 0.00 0.00 0.00 1.98
491 492 8.547481 TCCCTGAAATAACACACATCTATCTA 57.453 34.615 0.00 0.00 0.00 1.98
492 493 7.437713 TCCCTGAAATAACACACATCTATCT 57.562 36.000 0.00 0.00 0.00 1.98
493 494 6.203723 GCTCCCTGAAATAACACACATCTATC 59.796 42.308 0.00 0.00 0.00 2.08
494 495 6.058183 GCTCCCTGAAATAACACACATCTAT 58.942 40.000 0.00 0.00 0.00 1.98
495 496 5.428253 GCTCCCTGAAATAACACACATCTA 58.572 41.667 0.00 0.00 0.00 1.98
496 497 4.265073 GCTCCCTGAAATAACACACATCT 58.735 43.478 0.00 0.00 0.00 2.90
497 498 3.063997 CGCTCCCTGAAATAACACACATC 59.936 47.826 0.00 0.00 0.00 3.06
498 499 3.009723 CGCTCCCTGAAATAACACACAT 58.990 45.455 0.00 0.00 0.00 3.21
499 500 2.422597 CGCTCCCTGAAATAACACACA 58.577 47.619 0.00 0.00 0.00 3.72
500 501 1.737793 CCGCTCCCTGAAATAACACAC 59.262 52.381 0.00 0.00 0.00 3.82
501 502 1.948611 GCCGCTCCCTGAAATAACACA 60.949 52.381 0.00 0.00 0.00 3.72
502 503 0.733150 GCCGCTCCCTGAAATAACAC 59.267 55.000 0.00 0.00 0.00 3.32
503 504 0.742990 CGCCGCTCCCTGAAATAACA 60.743 55.000 0.00 0.00 0.00 2.41
504 505 0.461339 TCGCCGCTCCCTGAAATAAC 60.461 55.000 0.00 0.00 0.00 1.89
505 506 0.468226 ATCGCCGCTCCCTGAAATAA 59.532 50.000 0.00 0.00 0.00 1.40
506 507 0.468226 AATCGCCGCTCCCTGAAATA 59.532 50.000 0.00 0.00 0.00 1.40
507 508 0.815615 GAATCGCCGCTCCCTGAAAT 60.816 55.000 0.00 0.00 0.00 2.17
508 509 1.449601 GAATCGCCGCTCCCTGAAA 60.450 57.895 0.00 0.00 0.00 2.69
509 510 2.186903 GAATCGCCGCTCCCTGAA 59.813 61.111 0.00 0.00 0.00 3.02
510 511 4.207281 CGAATCGCCGCTCCCTGA 62.207 66.667 0.00 0.00 0.00 3.86
541 542 0.236187 GTCGAGATATCGAGCGCAGT 59.764 55.000 13.61 0.00 43.18 4.40
618 619 2.864343 CCGCGGTGTAATCCTTTTCTAG 59.136 50.000 19.50 0.00 0.00 2.43
761 762 0.099082 CGACGACCTGAGCTCCTTAC 59.901 60.000 12.15 0.00 0.00 2.34
861 862 2.293118 ACGGTATAGGGGTTAGTTGGGT 60.293 50.000 0.00 0.00 0.00 4.51
936 939 2.223479 ACACAAAAATGGCGTCACAGTC 60.223 45.455 0.00 0.00 0.00 3.51
1256 1262 2.713967 GCCAATCTGTTGCCCGCAT 61.714 57.895 0.00 0.00 33.90 4.73
1262 1268 1.266718 TCAACTTCGCCAATCTGTTGC 59.733 47.619 0.00 0.00 38.19 4.17
1291 1297 2.263741 CGAGCAGCAGGTTGCCTTT 61.264 57.895 4.43 0.00 46.52 3.11
1495 1503 5.375417 TTCTGCTGAAACCAACATACATG 57.625 39.130 3.21 0.00 0.00 3.21
1611 1619 3.423867 CCTTTACCACGAACGCAAATTTG 59.576 43.478 14.03 14.03 0.00 2.32
1627 1635 8.767478 TTACAGTTAAGTAGCACATCCTTTAC 57.233 34.615 0.00 0.00 0.00 2.01
1656 1664 7.235399 ACCTTATTCCACCAGTCAAAATTCAAT 59.765 33.333 0.00 0.00 0.00 2.57
1662 1670 6.366340 TGTAACCTTATTCCACCAGTCAAAA 58.634 36.000 0.00 0.00 0.00 2.44
1807 1815 3.004734 CCTCACCAAGCGAATCAAAAGTT 59.995 43.478 0.00 0.00 0.00 2.66
1828 1836 5.796350 ACAAATTGTAGAAGTCGTATGCC 57.204 39.130 0.00 0.00 0.00 4.40
1962 2779 4.759693 ACCGAACAAAATGAATAGCAGACA 59.240 37.500 0.00 0.00 0.00 3.41
1997 2823 8.921670 AGCACGTATGAATTTGGAAATTAAAAC 58.078 29.630 0.00 0.00 38.64 2.43
2022 2848 4.186926 CCATAACAGACAGTCATCACCAG 58.813 47.826 2.66 0.00 0.00 4.00
2057 2883 0.842635 CTGCTTCTGGCTTCCCCTAT 59.157 55.000 0.00 0.00 42.39 2.57
2090 2916 0.035881 CTGGACACTCACACCTGCAT 59.964 55.000 0.00 0.00 0.00 3.96
2213 3039 2.031919 TTCTTGTGCGACGGCCAT 59.968 55.556 2.24 0.00 38.85 4.40
2229 3055 7.624549 AGATCCTTAGTGTACACATCAATGTT 58.375 34.615 27.06 7.04 39.39 2.71
2344 3170 0.827368 CCTCAGGGTCCTCTTAGTGC 59.173 60.000 0.00 0.00 0.00 4.40
2509 3335 2.363406 GGCTGCTCCCATTTGCCT 60.363 61.111 0.00 0.00 40.36 4.75
2516 3342 3.390183 CTGCATACGGCTGCTCCCA 62.390 63.158 11.94 0.00 45.15 4.37
2564 3390 7.903145 ACAAGTTAGTCCTATATGTTGTGTCA 58.097 34.615 0.00 0.00 0.00 3.58
2648 3474 4.415150 CGCATCAGCACCCCAGGT 62.415 66.667 0.00 0.00 42.27 4.00
2693 3519 1.509703 GAAGGAACTCGGCGAAAACT 58.490 50.000 12.13 4.07 38.49 2.66
2816 3642 8.837788 TGTCATATTATGGTCAGATGATGAAC 57.162 34.615 3.89 0.00 46.65 3.18
3124 3956 8.166422 AGAAAACACCTCTAAAGTATGGTTTG 57.834 34.615 0.00 0.00 30.66 2.93
3150 3982 2.026915 TGTGTGCTAGTCATCTTGGCAT 60.027 45.455 0.00 0.00 35.24 4.40
3163 3995 1.080772 CTCGCTCCGTTGTGTGCTA 60.081 57.895 0.00 0.00 0.00 3.49
3193 4025 4.460263 GGGGCATGTATGTCTTCAACATA 58.540 43.478 0.00 0.00 46.95 2.29
3220 4052 1.184431 CAAACACATGCATGGGGCTA 58.816 50.000 31.51 0.00 45.15 3.93
3254 4086 1.466167 CTCCCTGTCAAATTGCAGTCG 59.534 52.381 13.41 6.23 0.00 4.18
3276 4108 6.212388 TCTTTTCTCCTTGTAGCTCTCTTCAT 59.788 38.462 0.00 0.00 0.00 2.57
3336 4168 2.843401 ATGTTTTGCCATGTGTGCAT 57.157 40.000 0.00 0.00 38.76 3.96
3382 4214 3.505680 AGCAACACAGTTTGACAGAACAA 59.494 39.130 0.00 0.00 31.94 2.83
3384 4216 3.375299 AGAGCAACACAGTTTGACAGAAC 59.625 43.478 0.00 0.00 0.00 3.01
3408 4241 1.110442 CTCACTGCACCTCCCTAGAG 58.890 60.000 0.00 0.00 40.09 2.43
3410 4243 1.480137 CTTCTCACTGCACCTCCCTAG 59.520 57.143 0.00 0.00 0.00 3.02
3411 4244 1.077169 TCTTCTCACTGCACCTCCCTA 59.923 52.381 0.00 0.00 0.00 3.53
3447 4280 4.682778 ATATTTTACTGGCGTGCCTCTA 57.317 40.909 12.84 0.00 36.94 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.