Multiple sequence alignment - TraesCS7A01G072600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G072600 chr7A 100.000 4051 0 0 1 4051 38130517 38134567 0.000000e+00 7481.0
1 TraesCS7A01G072600 chr7A 97.662 556 12 1 3015 3569 37777624 37778179 0.000000e+00 953.0
2 TraesCS7A01G072600 chr7A 97.959 294 6 0 3276 3569 492198194 492198487 1.000000e-140 510.0
3 TraesCS7A01G072600 chr7A 87.097 155 19 1 3885 4038 95796585 95796431 1.500000e-39 174.0
4 TraesCS7A01G072600 chr7D 91.661 3034 177 33 1 2980 38466218 38469229 0.000000e+00 4132.0
5 TraesCS7A01G072600 chr4A 92.487 2356 127 14 679 2990 642830315 642827966 0.000000e+00 3325.0
6 TraesCS7A01G072600 chr4A 89.362 611 61 3 30 640 642831319 642830713 0.000000e+00 765.0
7 TraesCS7A01G072600 chr4A 98.276 290 5 0 3278 3567 684707582 684707293 3.610000e-140 508.0
8 TraesCS7A01G072600 chr4A 80.263 152 22 6 3888 4035 632984772 632984919 1.540000e-19 108.0
9 TraesCS7A01G072600 chr4A 95.122 41 2 0 650 690 642830376 642830336 9.400000e-07 65.8
10 TraesCS7A01G072600 chr3B 78.232 1222 226 29 1080 2284 43679617 43680815 0.000000e+00 747.0
11 TraesCS7A01G072600 chr6A 98.288 292 5 0 3278 3569 16692456 16692165 2.790000e-141 512.0
12 TraesCS7A01G072600 chr3A 97.952 293 6 0 3277 3569 158317426 158317718 3.610000e-140 508.0
13 TraesCS7A01G072600 chr3A 96.980 298 7 2 3272 3569 559726145 559725850 2.170000e-137 499.0
14 TraesCS7A01G072600 chr3A 86.667 60 7 1 156 215 10441893 10441835 9.400000e-07 65.8
15 TraesCS7A01G072600 chr3A 89.362 47 4 1 3234 3280 688448716 688448761 1.570000e-04 58.4
16 TraesCS7A01G072600 chr1A 97.952 293 6 0 3277 3569 218472781 218472489 3.610000e-140 508.0
17 TraesCS7A01G072600 chr1A 97.945 292 6 0 3278 3569 218465756 218465465 1.300000e-139 507.0
18 TraesCS7A01G072600 chr5A 96.370 303 8 3 3267 3569 100700019 100699720 2.810000e-136 496.0
19 TraesCS7A01G072600 chr7B 79.618 157 21 7 3885 4035 79439961 79440112 7.160000e-18 102.0
20 TraesCS7A01G072600 chr7B 92.683 41 3 0 3234 3274 261986105 261986065 4.370000e-05 60.2
21 TraesCS7A01G072600 chr7B 96.875 32 1 0 3613 3644 70526581 70526550 2.000000e-03 54.7
22 TraesCS7A01G072600 chr7B 96.875 32 1 0 3613 3644 671009421 671009452 2.000000e-03 54.7
23 TraesCS7A01G072600 chr2D 83.654 104 16 1 3885 3987 455210157 455210260 3.330000e-16 97.1
24 TraesCS7A01G072600 chr4D 80.000 105 19 2 3885 3987 242443745 242443641 4.340000e-10 76.8
25 TraesCS7A01G072600 chr4D 97.297 37 1 0 3227 3263 388934003 388934039 3.380000e-06 63.9
26 TraesCS7A01G072600 chr4D 94.286 35 2 0 3613 3647 24959887 24959921 2.000000e-03 54.7
27 TraesCS7A01G072600 chr6D 80.808 99 15 4 1428 1524 2624456 2624360 1.560000e-09 75.0
28 TraesCS7A01G072600 chr6D 93.023 43 2 1 3222 3263 390481426 390481384 1.220000e-05 62.1
29 TraesCS7A01G072600 chr6D 90.909 44 3 1 3221 3263 14539744 14539701 1.570000e-04 58.4
30 TraesCS7A01G072600 chr6D 96.875 32 1 0 3613 3644 378290418 378290387 2.000000e-03 54.7
31 TraesCS7A01G072600 chr6B 86.765 68 8 1 3921 3987 227961907 227961840 1.560000e-09 75.0
32 TraesCS7A01G072600 chr6B 96.875 32 1 0 3613 3644 221293178 221293147 2.000000e-03 54.7
33 TraesCS7A01G072600 chr5D 94.872 39 2 0 3225 3263 330706741 330706703 1.220000e-05 62.1
34 TraesCS7A01G072600 chr5D 94.737 38 2 0 3226 3263 365987823 365987860 4.370000e-05 60.2
35 TraesCS7A01G072600 chr5B 94.872 39 2 0 3225 3263 383538656 383538694 1.220000e-05 62.1
36 TraesCS7A01G072600 chr1D 75.362 138 28 3 1951 2082 462290496 462290359 1.220000e-05 62.1
37 TraesCS7A01G072600 chr1B 76.423 123 23 3 1966 2082 637353020 637352898 1.220000e-05 62.1
38 TraesCS7A01G072600 chr1B 100.000 29 0 0 3946 3974 62790650 62790678 2.000000e-03 54.7
39 TraesCS7A01G072600 chr3D 100.000 32 0 0 3613 3644 591338408 591338439 4.370000e-05 60.2
40 TraesCS7A01G072600 chrUn 96.875 32 1 0 3613 3644 147163094 147163125 2.000000e-03 54.7
41 TraesCS7A01G072600 chrUn 96.875 32 1 0 3613 3644 147244943 147244974 2.000000e-03 54.7
42 TraesCS7A01G072600 chrUn 96.875 32 1 0 3613 3644 279381596 279381627 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G072600 chr7A 38130517 38134567 4050 False 7481.000000 7481 100.000000 1 4051 1 chr7A.!!$F2 4050
1 TraesCS7A01G072600 chr7A 37777624 37778179 555 False 953.000000 953 97.662000 3015 3569 1 chr7A.!!$F1 554
2 TraesCS7A01G072600 chr7D 38466218 38469229 3011 False 4132.000000 4132 91.661000 1 2980 1 chr7D.!!$F1 2979
3 TraesCS7A01G072600 chr4A 642827966 642831319 3353 True 1385.266667 3325 92.323667 30 2990 3 chr4A.!!$R2 2960
4 TraesCS7A01G072600 chr3B 43679617 43680815 1198 False 747.000000 747 78.232000 1080 2284 1 chr3B.!!$F1 1204

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
641 643 0.251073 CACCGGTCGGAAACCCTATT 59.749 55.0 16.9 0.0 46.27 1.73 F
1037 1423 1.188219 TGAGGAGTGGAGCCAGACAC 61.188 60.0 0.0 0.0 37.86 3.67 F
2308 2706 0.030638 AAGTCACACGCCATGTTTGC 59.969 50.0 0.0 0.0 40.64 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1610 1996 0.988832 TAGGGCCGAAATGGTTGAGT 59.011 50.0 0.00 0.00 41.21 3.41 R
2987 3412 0.383491 CATATCCGAAAGCGCGCTTG 60.383 55.0 43.43 31.41 36.26 4.01 R
3861 4287 0.026674 CATGTGCACTTGCCGATACG 59.973 55.0 19.41 0.00 41.18 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
155 156 8.537016 GCCCAAGATTTAAATTAGGGTTTTACT 58.463 33.333 23.44 4.81 37.16 2.24
186 187 7.392113 ACGTAATTGTATGGATTTGAGGTTTCA 59.608 33.333 0.00 0.00 0.00 2.69
240 241 3.612247 ATGTCTGCCCGGTCACTGC 62.612 63.158 0.00 0.00 0.00 4.40
368 369 7.147742 ACACTTCTCAAATCCCTCTAGAATCTC 60.148 40.741 0.00 0.00 0.00 2.75
447 448 4.093011 TCCCCATGATTTAGTTTGTTGGG 58.907 43.478 0.00 0.00 41.64 4.12
453 454 6.379703 CCATGATTTAGTTTGTTGGGGACATA 59.620 38.462 0.00 0.00 42.32 2.29
539 541 1.967066 CTAAATTGCAACCACCCACCA 59.033 47.619 0.00 0.00 0.00 4.17
629 631 1.375523 CTACAACCAGCCACCGGTC 60.376 63.158 2.59 0.00 34.99 4.79
638 640 3.633116 CCACCGGTCGGAAACCCT 61.633 66.667 16.90 0.00 46.27 4.34
641 643 0.251073 CACCGGTCGGAAACCCTATT 59.749 55.000 16.90 0.00 46.27 1.73
677 1005 4.439057 ACGTCGGTTAGATGTGCAATAAT 58.561 39.130 0.00 0.00 46.63 1.28
685 1013 8.559536 CGGTTAGATGTGCAATAATTAAGTCAT 58.440 33.333 0.00 0.00 0.00 3.06
714 1074 6.845908 AGATGCATCCTAGACATACCAAAAT 58.154 36.000 23.06 0.00 0.00 1.82
724 1084 6.599986 AGACATACCAAAATATACCCCCAA 57.400 37.500 0.00 0.00 0.00 4.12
742 1102 3.247411 CCCAAAAAGAAAATTCGTGCCAC 59.753 43.478 0.00 0.00 0.00 5.01
767 1127 8.158789 ACCTACCAACTAAGCAACAAACTAATA 58.841 33.333 0.00 0.00 0.00 0.98
785 1145 7.149202 ACTAATAAAGGATGGATTACAGGCA 57.851 36.000 0.00 0.00 0.00 4.75
793 1153 2.492025 TGGATTACAGGCAGGATCCTT 58.508 47.619 13.00 0.00 39.03 3.36
810 1170 2.024414 CCTTGGTATTTGTGGCTAGCC 58.976 52.381 27.71 27.71 0.00 3.93
873 1233 4.361420 CACATGTTGACAATGCAACTTGA 58.639 39.130 26.20 10.29 46.31 3.02
970 1332 6.311445 GGCACGTCCAACTCAGATATATATTG 59.689 42.308 0.00 0.00 34.01 1.90
1037 1423 1.188219 TGAGGAGTGGAGCCAGACAC 61.188 60.000 0.00 0.00 37.86 3.67
1039 1425 2.262915 GAGTGGAGCCAGACACCG 59.737 66.667 0.00 0.00 38.34 4.94
1200 1586 3.134262 CAGGAGATGGAGAATCTGAAGCA 59.866 47.826 0.00 0.00 46.12 3.91
1861 2259 4.479993 CTGGCGCCCCTCTTCCTG 62.480 72.222 26.77 0.00 0.00 3.86
2284 2682 2.231478 CCTCTCTCTAAAGACACGCCAA 59.769 50.000 0.00 0.00 0.00 4.52
2299 2697 1.323534 CGCCAATAGTAAGTCACACGC 59.676 52.381 0.00 0.00 0.00 5.34
2308 2706 0.030638 AAGTCACACGCCATGTTTGC 59.969 50.000 0.00 0.00 40.64 3.68
2309 2707 1.371635 GTCACACGCCATGTTTGCC 60.372 57.895 0.00 0.00 40.64 4.52
2310 2708 1.825622 TCACACGCCATGTTTGCCA 60.826 52.632 0.00 0.00 40.64 4.92
2313 2711 1.153784 CACGCCATGTTTGCCATCC 60.154 57.895 0.00 0.00 0.00 3.51
2314 2712 1.606025 ACGCCATGTTTGCCATCCA 60.606 52.632 0.00 0.00 0.00 3.41
2321 2720 4.798263 GCCATGTTTGCCATCCATATCTTG 60.798 45.833 0.00 0.00 0.00 3.02
2356 2759 0.642156 TCCTAGATTCCTGCCCCTGA 59.358 55.000 0.00 0.00 0.00 3.86
2359 2762 2.569404 CCTAGATTCCTGCCCCTGATAC 59.431 54.545 0.00 0.00 0.00 2.24
2386 2804 6.255215 TGTTTTGTCAGTTCTTTAAGCTTCG 58.745 36.000 0.00 0.00 0.00 3.79
2405 2823 8.652810 AGCTTCGTACTTTCTTACTTTTGTAA 57.347 30.769 0.00 0.00 42.06 2.41
2420 2838 7.080353 ACTTTTGTAATTATAGTCGGTTGCC 57.920 36.000 0.00 0.00 0.00 4.52
2450 2868 6.095377 GGTTCTGTTCTGCTGAATATTTTGG 58.905 40.000 9.40 0.00 37.38 3.28
2454 2872 8.125978 TCTGTTCTGCTGAATATTTTGGAAAT 57.874 30.769 9.40 0.00 34.40 2.17
2457 2875 9.558396 TGTTCTGCTGAATATTTTGGAAATTTT 57.442 25.926 9.40 0.00 34.40 1.82
2487 2905 3.996921 ATCTGATCTGTGCTTGAGGTT 57.003 42.857 0.00 0.00 0.00 3.50
2491 2909 4.997395 TCTGATCTGTGCTTGAGGTTTAAC 59.003 41.667 0.00 0.00 0.00 2.01
2492 2910 4.713553 TGATCTGTGCTTGAGGTTTAACA 58.286 39.130 0.00 0.00 0.00 2.41
2509 2927 1.333177 ACAGGCGTCTCTGACTCTTT 58.667 50.000 8.98 0.00 38.11 2.52
2517 2935 5.378180 GCGTCTCTGACTCTTTCAATTTTC 58.622 41.667 0.00 0.00 32.21 2.29
2534 2952 4.835284 TTTTCTAATGAAAATGGGGGCC 57.165 40.909 0.00 0.00 44.39 5.80
2535 2953 3.774842 TTCTAATGAAAATGGGGGCCT 57.225 42.857 0.84 0.00 0.00 5.19
2536 2954 4.890499 TTCTAATGAAAATGGGGGCCTA 57.110 40.909 0.84 0.00 0.00 3.93
2537 2955 4.178956 TCTAATGAAAATGGGGGCCTAC 57.821 45.455 0.84 0.00 0.00 3.18
2558 2976 7.824289 GCCTACAATAATTATCACTCCATAGCA 59.176 37.037 0.00 0.00 0.00 3.49
2559 2977 9.725019 CCTACAATAATTATCACTCCATAGCAA 57.275 33.333 0.00 0.00 0.00 3.91
2573 2991 7.914346 CACTCCATAGCAATTTTGAGAGAAATC 59.086 37.037 0.00 0.00 0.00 2.17
2587 3005 6.800543 TGAGAGAAATCAGTAGCTCATACAC 58.199 40.000 0.00 0.00 36.79 2.90
2669 3087 0.383246 CTCTCGCGGATCGTTAGTCG 60.383 60.000 6.13 0.00 39.67 4.18
2697 3115 7.000472 CCTTCATGGCTAAATCTAATCTCCAA 59.000 38.462 0.00 0.00 0.00 3.53
2715 3136 3.392947 TCCAATGTTGTACAAGGGACAGA 59.607 43.478 8.98 0.00 31.96 3.41
2716 3137 4.141287 CCAATGTTGTACAAGGGACAGAA 58.859 43.478 8.98 0.00 29.87 3.02
2717 3138 4.582656 CCAATGTTGTACAAGGGACAGAAA 59.417 41.667 8.98 0.00 29.87 2.52
2732 3153 1.040339 AGAAAAAGCACACCCGCCAA 61.040 50.000 0.00 0.00 0.00 4.52
2771 3192 1.355066 GCTGCCGTTCTAGTGCTGTC 61.355 60.000 0.00 0.00 0.00 3.51
2786 3207 0.171455 CTGTCAGGTAGCGGTGTCTC 59.829 60.000 0.00 0.00 0.00 3.36
2815 3240 3.651562 ACGTTTGTTCAAGTGTCTTCG 57.348 42.857 0.00 0.00 0.00 3.79
2817 3242 2.030457 CGTTTGTTCAAGTGTCTTCGCT 59.970 45.455 0.00 0.00 35.79 4.93
2818 3243 3.244345 CGTTTGTTCAAGTGTCTTCGCTA 59.756 43.478 0.00 0.00 33.71 4.26
2886 3311 6.804783 ACGTGGTTTCAGTTGAAAAGTAAAAG 59.195 34.615 8.74 1.56 44.58 2.27
2927 3352 2.751436 CACCATGCTTCACCGGGG 60.751 66.667 6.32 0.00 0.00 5.73
2937 3362 2.510064 TTCACCGGGGTGCGTCATAC 62.510 60.000 13.03 0.00 45.04 2.39
2963 3388 5.705400 CCATAATTATGTTTCCTCCCCAGT 58.295 41.667 21.20 0.00 31.82 4.00
2980 3405 0.792640 AGTTTCGATGCAACTGCTCG 59.207 50.000 13.73 13.73 42.66 5.03
2982 3407 1.724623 GTTTCGATGCAACTGCTCGTA 59.275 47.619 17.13 9.58 42.66 3.43
2986 3411 2.335015 GATGCAACTGCTCGTACGCG 62.335 60.000 11.24 3.53 42.66 6.01
2987 3412 4.485208 GCAACTGCTCGTACGCGC 62.485 66.667 22.60 22.60 38.21 6.86
2988 3413 3.103289 CAACTGCTCGTACGCGCA 61.103 61.111 28.85 28.85 38.14 6.09
2989 3414 2.355363 AACTGCTCGTACGCGCAA 60.355 55.556 30.05 16.07 35.33 4.85
2990 3415 2.372690 AACTGCTCGTACGCGCAAG 61.373 57.895 30.05 24.56 35.33 4.01
3003 3428 4.166011 GCAAGCGCGCTTTCGGAT 62.166 61.111 41.48 19.90 33.42 4.18
3004 3429 2.808958 GCAAGCGCGCTTTCGGATA 61.809 57.895 41.48 0.00 33.42 2.59
3005 3430 1.934463 CAAGCGCGCTTTCGGATAT 59.066 52.632 41.48 18.23 33.42 1.63
3006 3431 0.383491 CAAGCGCGCTTTCGGATATG 60.383 55.000 41.48 25.57 33.42 1.78
3007 3432 0.810031 AAGCGCGCTTTCGGATATGT 60.810 50.000 38.88 15.01 35.95 2.29
3008 3433 0.810031 AGCGCGCTTTCGGATATGTT 60.810 50.000 31.32 0.00 35.95 2.71
3009 3434 0.654472 GCGCGCTTTCGGATATGTTG 60.654 55.000 26.67 0.00 35.95 3.33
3010 3435 0.927537 CGCGCTTTCGGATATGTTGA 59.072 50.000 5.56 0.00 35.95 3.18
3011 3436 1.071239 CGCGCTTTCGGATATGTTGAG 60.071 52.381 5.56 0.00 35.95 3.02
3012 3437 1.933853 GCGCTTTCGGATATGTTGAGT 59.066 47.619 0.00 0.00 35.95 3.41
3013 3438 2.351726 GCGCTTTCGGATATGTTGAGTT 59.648 45.455 0.00 0.00 35.95 3.01
3221 3647 4.083855 TGCATCTCGAAAAGCAAAGTACTG 60.084 41.667 0.00 0.00 33.48 2.74
3225 3651 6.431198 TCTCGAAAAGCAAAGTACTGTTTT 57.569 33.333 0.00 0.78 31.88 2.43
3316 3742 9.533831 CCCTAGAGGCAATAATAAAATGGTTAT 57.466 33.333 0.00 0.00 0.00 1.89
3381 3807 8.458573 TGCTATAATTGTGTTATCCGGAAATT 57.541 30.769 9.01 11.50 0.00 1.82
3516 3942 6.205270 TCATTGATAACGGGATCACATCATTG 59.795 38.462 10.32 10.32 35.56 2.82
3518 3944 4.102367 TGATAACGGGATCACATCATTGGA 59.898 41.667 0.00 0.00 30.75 3.53
3569 3995 4.683781 CCTAAGCATAGCTCAAAGATCGTC 59.316 45.833 0.00 0.00 38.25 4.20
3570 3996 3.808466 AGCATAGCTCAAAGATCGTCA 57.192 42.857 0.00 0.00 30.62 4.35
3571 3997 4.128925 AGCATAGCTCAAAGATCGTCAA 57.871 40.909 0.00 0.00 30.62 3.18
3572 3998 4.507710 AGCATAGCTCAAAGATCGTCAAA 58.492 39.130 0.00 0.00 30.62 2.69
3573 3999 4.937620 AGCATAGCTCAAAGATCGTCAAAA 59.062 37.500 0.00 0.00 30.62 2.44
3574 4000 5.412594 AGCATAGCTCAAAGATCGTCAAAAA 59.587 36.000 0.00 0.00 30.62 1.94
3575 4001 5.736358 GCATAGCTCAAAGATCGTCAAAAAG 59.264 40.000 0.00 0.00 0.00 2.27
3576 4002 4.152607 AGCTCAAAGATCGTCAAAAAGC 57.847 40.909 0.00 0.00 0.00 3.51
3577 4003 2.904932 GCTCAAAGATCGTCAAAAAGCG 59.095 45.455 0.00 0.00 0.00 4.68
3578 4004 3.607078 GCTCAAAGATCGTCAAAAAGCGT 60.607 43.478 0.00 0.00 0.00 5.07
3579 4005 4.128554 TCAAAGATCGTCAAAAAGCGTC 57.871 40.909 0.00 0.00 0.00 5.19
3580 4006 3.558006 TCAAAGATCGTCAAAAAGCGTCA 59.442 39.130 0.00 0.00 0.00 4.35
3581 4007 3.521524 AAGATCGTCAAAAAGCGTCAC 57.478 42.857 0.00 0.00 0.00 3.67
3582 4008 1.798813 AGATCGTCAAAAAGCGTCACC 59.201 47.619 0.00 0.00 0.00 4.02
3583 4009 0.511221 ATCGTCAAAAAGCGTCACCG 59.489 50.000 0.00 0.00 37.07 4.94
3593 4019 4.012895 CGTCACCGCACACCAAGC 62.013 66.667 0.00 0.00 0.00 4.01
3594 4020 2.591715 GTCACCGCACACCAAGCT 60.592 61.111 0.00 0.00 0.00 3.74
3595 4021 2.591429 TCACCGCACACCAAGCTG 60.591 61.111 0.00 0.00 0.00 4.24
3596 4022 3.663176 CACCGCACACCAAGCTGG 61.663 66.667 0.00 0.00 45.02 4.85
3597 4023 3.872603 ACCGCACACCAAGCTGGA 61.873 61.111 8.91 0.00 40.96 3.86
3598 4024 2.594303 CCGCACACCAAGCTGGAA 60.594 61.111 8.91 0.00 40.96 3.53
3599 4025 2.620112 CCGCACACCAAGCTGGAAG 61.620 63.158 8.91 4.24 40.96 3.46
3612 4038 2.570442 CTGGAAGCCGTTACTCTCTC 57.430 55.000 0.00 0.00 0.00 3.20
3613 4039 2.096248 CTGGAAGCCGTTACTCTCTCT 58.904 52.381 0.00 0.00 0.00 3.10
3614 4040 3.280295 CTGGAAGCCGTTACTCTCTCTA 58.720 50.000 0.00 0.00 0.00 2.43
3615 4041 3.693807 TGGAAGCCGTTACTCTCTCTAA 58.306 45.455 0.00 0.00 0.00 2.10
3616 4042 4.279145 TGGAAGCCGTTACTCTCTCTAAT 58.721 43.478 0.00 0.00 0.00 1.73
3617 4043 5.443283 TGGAAGCCGTTACTCTCTCTAATA 58.557 41.667 0.00 0.00 0.00 0.98
3618 4044 6.069331 TGGAAGCCGTTACTCTCTCTAATAT 58.931 40.000 0.00 0.00 0.00 1.28
3619 4045 6.207025 TGGAAGCCGTTACTCTCTCTAATATC 59.793 42.308 0.00 0.00 0.00 1.63
3620 4046 6.207025 GGAAGCCGTTACTCTCTCTAATATCA 59.793 42.308 0.00 0.00 0.00 2.15
3621 4047 7.255520 GGAAGCCGTTACTCTCTCTAATATCAA 60.256 40.741 0.00 0.00 0.00 2.57
3622 4048 7.584122 AGCCGTTACTCTCTCTAATATCAAA 57.416 36.000 0.00 0.00 0.00 2.69
3623 4049 8.008513 AGCCGTTACTCTCTCTAATATCAAAA 57.991 34.615 0.00 0.00 0.00 2.44
3624 4050 8.475639 AGCCGTTACTCTCTCTAATATCAAAAA 58.524 33.333 0.00 0.00 0.00 1.94
3625 4051 9.262358 GCCGTTACTCTCTCTAATATCAAAAAT 57.738 33.333 0.00 0.00 0.00 1.82
3659 4085 3.482436 TGGGACAAACGAAATAGCTTGT 58.518 40.909 0.00 0.00 33.66 3.16
3660 4086 4.643463 TGGGACAAACGAAATAGCTTGTA 58.357 39.130 0.00 0.00 31.45 2.41
3661 4087 5.064558 TGGGACAAACGAAATAGCTTGTAA 58.935 37.500 0.00 0.00 31.45 2.41
3662 4088 5.180492 TGGGACAAACGAAATAGCTTGTAAG 59.820 40.000 0.00 0.00 31.45 2.34
3663 4089 5.180680 GGGACAAACGAAATAGCTTGTAAGT 59.819 40.000 0.00 0.00 31.45 2.24
3664 4090 6.077838 GGACAAACGAAATAGCTTGTAAGTG 58.922 40.000 0.00 0.00 31.45 3.16
3665 4091 6.293244 GGACAAACGAAATAGCTTGTAAGTGT 60.293 38.462 0.00 0.00 31.45 3.55
3666 4092 6.427150 ACAAACGAAATAGCTTGTAAGTGTG 58.573 36.000 0.00 0.00 29.74 3.82
3667 4093 6.037830 ACAAACGAAATAGCTTGTAAGTGTGT 59.962 34.615 0.00 0.00 29.74 3.72
3668 4094 5.591643 ACGAAATAGCTTGTAAGTGTGTG 57.408 39.130 0.00 0.00 0.00 3.82
3669 4095 5.054477 ACGAAATAGCTTGTAAGTGTGTGT 58.946 37.500 0.00 0.00 0.00 3.72
3670 4096 5.050363 ACGAAATAGCTTGTAAGTGTGTGTG 60.050 40.000 0.00 0.00 0.00 3.82
3671 4097 5.176774 CGAAATAGCTTGTAAGTGTGTGTGA 59.823 40.000 0.00 0.00 0.00 3.58
3672 4098 6.128553 CGAAATAGCTTGTAAGTGTGTGTGAT 60.129 38.462 0.00 0.00 0.00 3.06
3673 4099 7.510549 AAATAGCTTGTAAGTGTGTGTGATT 57.489 32.000 0.00 0.00 0.00 2.57
3674 4100 7.510549 AATAGCTTGTAAGTGTGTGTGATTT 57.489 32.000 0.00 0.00 0.00 2.17
3675 4101 8.615878 AATAGCTTGTAAGTGTGTGTGATTTA 57.384 30.769 0.00 0.00 0.00 1.40
3676 4102 8.792830 ATAGCTTGTAAGTGTGTGTGATTTAT 57.207 30.769 0.00 0.00 0.00 1.40
3677 4103 7.133891 AGCTTGTAAGTGTGTGTGATTTATC 57.866 36.000 0.00 0.00 0.00 1.75
3678 4104 6.149474 AGCTTGTAAGTGTGTGTGATTTATCC 59.851 38.462 0.00 0.00 0.00 2.59
3679 4105 6.622896 GCTTGTAAGTGTGTGTGATTTATCCC 60.623 42.308 0.00 0.00 0.00 3.85
3680 4106 5.870706 TGTAAGTGTGTGTGATTTATCCCA 58.129 37.500 0.00 0.00 0.00 4.37
3681 4107 5.703592 TGTAAGTGTGTGTGATTTATCCCAC 59.296 40.000 0.00 0.00 36.01 4.61
3682 4108 4.365514 AGTGTGTGTGATTTATCCCACA 57.634 40.909 4.26 4.26 41.68 4.17
3690 4116 5.810095 TGTGATTTATCCCACACATGTACA 58.190 37.500 0.00 0.00 38.26 2.90
3691 4117 6.241645 TGTGATTTATCCCACACATGTACAA 58.758 36.000 0.00 0.00 38.26 2.41
3692 4118 6.717084 TGTGATTTATCCCACACATGTACAAA 59.283 34.615 0.00 0.00 38.26 2.83
3693 4119 7.231519 TGTGATTTATCCCACACATGTACAAAA 59.768 33.333 0.00 0.00 38.26 2.44
3694 4120 8.250332 GTGATTTATCCCACACATGTACAAAAT 58.750 33.333 0.00 0.00 33.72 1.82
3695 4121 8.811017 TGATTTATCCCACACATGTACAAAATT 58.189 29.630 0.00 0.00 0.00 1.82
3698 4124 5.614923 TCCCACACATGTACAAAATTACG 57.385 39.130 0.00 0.00 0.00 3.18
3699 4125 4.083217 TCCCACACATGTACAAAATTACGC 60.083 41.667 0.00 0.00 0.00 4.42
3700 4126 3.843541 CCACACATGTACAAAATTACGCG 59.156 43.478 3.53 3.53 0.00 6.01
3701 4127 4.459606 CACACATGTACAAAATTACGCGT 58.540 39.130 19.17 19.17 0.00 6.01
3702 4128 4.317031 CACACATGTACAAAATTACGCGTG 59.683 41.667 24.59 6.26 34.90 5.34
3703 4129 3.843541 CACATGTACAAAATTACGCGTGG 59.156 43.478 24.59 6.66 0.00 4.94
3704 4130 3.747010 ACATGTACAAAATTACGCGTGGA 59.253 39.130 24.59 11.15 0.00 4.02
3705 4131 4.213694 ACATGTACAAAATTACGCGTGGAA 59.786 37.500 24.59 9.89 0.00 3.53
3706 4132 5.106475 ACATGTACAAAATTACGCGTGGAAT 60.106 36.000 24.59 12.12 0.00 3.01
3707 4133 4.713806 TGTACAAAATTACGCGTGGAATG 58.286 39.130 24.59 16.14 0.00 2.67
3708 4134 3.907894 ACAAAATTACGCGTGGAATGT 57.092 38.095 24.59 16.79 0.00 2.71
3709 4135 5.407691 TGTACAAAATTACGCGTGGAATGTA 59.592 36.000 24.59 19.73 0.00 2.29
3710 4136 4.714851 ACAAAATTACGCGTGGAATGTAC 58.285 39.130 24.59 0.00 0.00 2.90
3711 4137 4.453136 ACAAAATTACGCGTGGAATGTACT 59.547 37.500 24.59 0.00 0.00 2.73
3712 4138 5.049267 ACAAAATTACGCGTGGAATGTACTT 60.049 36.000 24.59 2.84 0.00 2.24
3713 4139 5.616488 AAATTACGCGTGGAATGTACTTT 57.384 34.783 24.59 3.64 0.00 2.66
3714 4140 4.593597 ATTACGCGTGGAATGTACTTTG 57.406 40.909 24.59 0.00 0.00 2.77
3715 4141 1.153353 ACGCGTGGAATGTACTTTGG 58.847 50.000 12.93 0.00 0.00 3.28
3716 4142 1.270412 ACGCGTGGAATGTACTTTGGA 60.270 47.619 12.93 0.00 0.00 3.53
3717 4143 1.127951 CGCGTGGAATGTACTTTGGAC 59.872 52.381 0.00 0.00 0.00 4.02
3718 4144 1.467342 GCGTGGAATGTACTTTGGACC 59.533 52.381 0.00 0.00 0.00 4.46
3719 4145 2.874457 GCGTGGAATGTACTTTGGACCT 60.874 50.000 0.00 0.00 0.00 3.85
3720 4146 2.742053 CGTGGAATGTACTTTGGACCTG 59.258 50.000 0.00 0.00 0.00 4.00
3721 4147 2.488153 GTGGAATGTACTTTGGACCTGC 59.512 50.000 0.00 0.00 0.00 4.85
3722 4148 2.107378 TGGAATGTACTTTGGACCTGCA 59.893 45.455 0.00 0.00 0.00 4.41
3723 4149 2.488153 GGAATGTACTTTGGACCTGCAC 59.512 50.000 0.00 0.00 0.00 4.57
3724 4150 2.949177 ATGTACTTTGGACCTGCACA 57.051 45.000 0.00 0.00 0.00 4.57
3725 4151 1.961793 TGTACTTTGGACCTGCACAC 58.038 50.000 0.00 0.00 0.00 3.82
3726 4152 0.865769 GTACTTTGGACCTGCACACG 59.134 55.000 0.00 0.00 0.00 4.49
3727 4153 0.466543 TACTTTGGACCTGCACACGT 59.533 50.000 0.00 0.00 0.00 4.49
3728 4154 0.393808 ACTTTGGACCTGCACACGTT 60.394 50.000 0.00 0.00 0.00 3.99
3729 4155 0.307760 CTTTGGACCTGCACACGTTC 59.692 55.000 0.00 0.00 0.00 3.95
3730 4156 0.393132 TTTGGACCTGCACACGTTCA 60.393 50.000 0.00 0.00 0.00 3.18
3731 4157 0.393132 TTGGACCTGCACACGTTCAA 60.393 50.000 0.00 0.00 0.00 2.69
3732 4158 0.813610 TGGACCTGCACACGTTCAAG 60.814 55.000 0.00 0.00 0.00 3.02
3733 4159 1.507141 GGACCTGCACACGTTCAAGG 61.507 60.000 0.00 0.00 0.00 3.61
3734 4160 2.117941 GACCTGCACACGTTCAAGGC 62.118 60.000 3.79 0.00 0.00 4.35
3735 4161 2.186160 CCTGCACACGTTCAAGGCA 61.186 57.895 0.00 0.00 0.00 4.75
3736 4162 1.723608 CCTGCACACGTTCAAGGCAA 61.724 55.000 0.00 0.00 33.58 4.52
3737 4163 0.100325 CTGCACACGTTCAAGGCAAA 59.900 50.000 0.00 0.00 33.58 3.68
3738 4164 0.528017 TGCACACGTTCAAGGCAAAA 59.472 45.000 0.00 0.00 0.00 2.44
3739 4165 1.135915 TGCACACGTTCAAGGCAAAAT 59.864 42.857 0.00 0.00 0.00 1.82
3740 4166 1.786579 GCACACGTTCAAGGCAAAATC 59.213 47.619 0.00 0.00 0.00 2.17
3741 4167 2.797792 GCACACGTTCAAGGCAAAATCA 60.798 45.455 0.00 0.00 0.00 2.57
3742 4168 2.788786 CACACGTTCAAGGCAAAATCAC 59.211 45.455 0.00 0.00 0.00 3.06
3743 4169 2.425312 ACACGTTCAAGGCAAAATCACA 59.575 40.909 0.00 0.00 0.00 3.58
3744 4170 3.068024 ACACGTTCAAGGCAAAATCACAT 59.932 39.130 0.00 0.00 0.00 3.21
3745 4171 4.050553 CACGTTCAAGGCAAAATCACATT 58.949 39.130 0.00 0.00 0.00 2.71
3746 4172 4.050553 ACGTTCAAGGCAAAATCACATTG 58.949 39.130 0.00 0.00 0.00 2.82
3747 4173 4.050553 CGTTCAAGGCAAAATCACATTGT 58.949 39.130 0.00 0.00 0.00 2.71
3748 4174 5.218885 CGTTCAAGGCAAAATCACATTGTA 58.781 37.500 0.00 0.00 0.00 2.41
3749 4175 5.116983 CGTTCAAGGCAAAATCACATTGTAC 59.883 40.000 0.00 0.00 0.00 2.90
3750 4176 5.781210 TCAAGGCAAAATCACATTGTACA 57.219 34.783 0.00 0.00 0.00 2.90
3751 4177 5.771469 TCAAGGCAAAATCACATTGTACAG 58.229 37.500 0.00 0.00 0.00 2.74
3752 4178 4.789012 AGGCAAAATCACATTGTACAGG 57.211 40.909 0.00 0.00 0.00 4.00
3753 4179 3.511146 AGGCAAAATCACATTGTACAGGG 59.489 43.478 0.00 0.00 0.00 4.45
3754 4180 3.258123 GGCAAAATCACATTGTACAGGGT 59.742 43.478 0.00 0.00 0.00 4.34
3755 4181 4.461081 GGCAAAATCACATTGTACAGGGTA 59.539 41.667 0.00 0.00 0.00 3.69
3756 4182 5.399013 GCAAAATCACATTGTACAGGGTAC 58.601 41.667 0.00 0.00 0.00 3.34
3757 4183 5.183140 GCAAAATCACATTGTACAGGGTACT 59.817 40.000 7.90 0.00 0.00 2.73
3758 4184 6.294508 GCAAAATCACATTGTACAGGGTACTT 60.295 38.462 7.90 0.00 0.00 2.24
3759 4185 7.657336 CAAAATCACATTGTACAGGGTACTTT 58.343 34.615 7.90 0.11 0.00 2.66
3760 4186 6.817765 AATCACATTGTACAGGGTACTTTG 57.182 37.500 7.90 7.58 0.00 2.77
3761 4187 4.647611 TCACATTGTACAGGGTACTTTGG 58.352 43.478 7.90 0.00 0.00 3.28
3762 4188 4.348461 TCACATTGTACAGGGTACTTTGGA 59.652 41.667 7.90 3.65 0.00 3.53
3763 4189 4.454504 CACATTGTACAGGGTACTTTGGAC 59.545 45.833 7.90 5.80 0.00 4.02
3764 4190 4.349930 ACATTGTACAGGGTACTTTGGACT 59.650 41.667 11.89 0.00 30.32 3.85
3765 4191 5.163131 ACATTGTACAGGGTACTTTGGACTT 60.163 40.000 11.89 0.78 30.32 3.01
3766 4192 4.345859 TGTACAGGGTACTTTGGACTTG 57.654 45.455 11.89 0.00 30.32 3.16
3767 4193 2.271944 ACAGGGTACTTTGGACTTGC 57.728 50.000 0.00 0.00 0.00 4.01
3768 4194 1.493022 ACAGGGTACTTTGGACTTGCA 59.507 47.619 0.00 0.00 0.00 4.08
3769 4195 1.880027 CAGGGTACTTTGGACTTGCAC 59.120 52.381 0.00 0.00 0.00 4.57
3770 4196 1.493022 AGGGTACTTTGGACTTGCACA 59.507 47.619 0.00 0.00 0.00 4.57
3771 4197 1.607148 GGGTACTTTGGACTTGCACAC 59.393 52.381 0.00 0.00 0.00 3.82
3772 4198 1.263217 GGTACTTTGGACTTGCACACG 59.737 52.381 0.00 0.00 0.00 4.49
3773 4199 1.263217 GTACTTTGGACTTGCACACGG 59.737 52.381 0.00 0.00 0.00 4.94
3774 4200 1.008538 CTTTGGACTTGCACACGGC 60.009 57.895 0.00 0.00 45.13 5.68
3775 4201 2.406452 CTTTGGACTTGCACACGGCC 62.406 60.000 0.00 0.00 43.89 6.13
3776 4202 3.705934 TTGGACTTGCACACGGCCA 62.706 57.895 2.24 0.00 43.89 5.36
3777 4203 3.357079 GGACTTGCACACGGCCAG 61.357 66.667 2.24 0.00 43.89 4.85
3778 4204 3.357079 GACTTGCACACGGCCAGG 61.357 66.667 2.24 0.00 43.89 4.45
3783 4209 3.910490 GCACACGGCCAGGCAAAA 61.910 61.111 15.19 0.00 36.11 2.44
3784 4210 2.027460 CACACGGCCAGGCAAAAC 59.973 61.111 15.19 0.00 0.00 2.43
3785 4211 2.441164 ACACGGCCAGGCAAAACA 60.441 55.556 15.19 0.00 0.00 2.83
3786 4212 2.055042 ACACGGCCAGGCAAAACAA 61.055 52.632 15.19 0.00 0.00 2.83
3787 4213 1.591327 CACGGCCAGGCAAAACAAC 60.591 57.895 15.19 0.00 0.00 3.32
3788 4214 2.028925 CGGCCAGGCAAAACAACC 59.971 61.111 15.19 0.00 0.00 3.77
3789 4215 2.028925 GGCCAGGCAAAACAACCG 59.971 61.111 15.19 0.00 0.00 4.44
3790 4216 2.791868 GGCCAGGCAAAACAACCGT 61.792 57.895 15.19 0.00 0.00 4.83
3791 4217 1.591327 GCCAGGCAAAACAACCGTG 60.591 57.895 6.55 0.00 0.00 4.94
3792 4218 1.813192 CCAGGCAAAACAACCGTGT 59.187 52.632 0.00 0.00 40.75 4.49
3793 4219 0.248866 CCAGGCAAAACAACCGTGTC 60.249 55.000 0.00 0.00 36.80 3.67
3794 4220 0.738389 CAGGCAAAACAACCGTGTCT 59.262 50.000 0.00 0.00 36.80 3.41
3795 4221 0.738389 AGGCAAAACAACCGTGTCTG 59.262 50.000 0.00 0.00 36.80 3.51
3796 4222 0.736053 GGCAAAACAACCGTGTCTGA 59.264 50.000 0.00 0.00 36.80 3.27
3797 4223 1.336755 GGCAAAACAACCGTGTCTGAT 59.663 47.619 0.00 0.00 36.80 2.90
3798 4224 2.384382 GCAAAACAACCGTGTCTGATG 58.616 47.619 0.00 0.00 36.80 3.07
3799 4225 2.223479 GCAAAACAACCGTGTCTGATGT 60.223 45.455 0.00 0.00 36.80 3.06
3800 4226 3.002862 GCAAAACAACCGTGTCTGATGTA 59.997 43.478 0.00 0.00 36.80 2.29
3801 4227 4.523813 CAAAACAACCGTGTCTGATGTAC 58.476 43.478 0.00 0.00 36.80 2.90
3802 4228 3.462483 AACAACCGTGTCTGATGTACA 57.538 42.857 0.00 0.00 36.80 2.90
3803 4229 3.462483 ACAACCGTGTCTGATGTACAA 57.538 42.857 0.00 0.00 29.49 2.41
3804 4230 4.002906 ACAACCGTGTCTGATGTACAAT 57.997 40.909 0.00 0.00 29.49 2.71
3805 4231 4.385825 ACAACCGTGTCTGATGTACAATT 58.614 39.130 0.00 0.00 29.49 2.32
3806 4232 4.819630 ACAACCGTGTCTGATGTACAATTT 59.180 37.500 0.00 0.00 29.49 1.82
3807 4233 5.298276 ACAACCGTGTCTGATGTACAATTTT 59.702 36.000 0.00 0.00 29.49 1.82
3808 4234 6.483974 ACAACCGTGTCTGATGTACAATTTTA 59.516 34.615 0.00 0.00 29.49 1.52
3809 4235 7.012515 ACAACCGTGTCTGATGTACAATTTTAA 59.987 33.333 0.00 0.00 29.49 1.52
3810 4236 7.681939 ACCGTGTCTGATGTACAATTTTAAT 57.318 32.000 0.00 0.00 0.00 1.40
3811 4237 8.106247 ACCGTGTCTGATGTACAATTTTAATT 57.894 30.769 0.00 0.00 0.00 1.40
3812 4238 8.573035 ACCGTGTCTGATGTACAATTTTAATTT 58.427 29.630 0.00 0.00 0.00 1.82
3813 4239 9.405587 CCGTGTCTGATGTACAATTTTAATTTT 57.594 29.630 0.00 0.00 0.00 1.82
3856 4282 6.451064 AAAATAGTTATTTTGGCTCCGGAG 57.549 37.500 27.83 27.83 42.47 4.63
3857 4283 4.887655 AAATAGTTATTTTGGCTCCGGAGG 59.112 41.667 32.06 14.53 40.30 4.30
3858 4284 8.077300 AAAATAGTTATTTTGGCTCCGGAGGC 62.077 42.308 42.55 42.55 44.87 4.70
3868 4294 2.258591 CCGGAGGCATCGTATCGG 59.741 66.667 0.00 0.00 46.14 4.18
3869 4295 2.430921 CGGAGGCATCGTATCGGC 60.431 66.667 0.00 0.00 0.00 5.54
3870 4296 2.734591 GGAGGCATCGTATCGGCA 59.265 61.111 0.00 0.00 0.00 5.69
3871 4297 1.069090 GGAGGCATCGTATCGGCAA 59.931 57.895 0.00 0.00 0.00 4.52
3872 4298 0.946221 GGAGGCATCGTATCGGCAAG 60.946 60.000 0.00 0.00 0.00 4.01
3873 4299 0.249489 GAGGCATCGTATCGGCAAGT 60.249 55.000 0.00 0.00 0.00 3.16
3874 4300 0.530650 AGGCATCGTATCGGCAAGTG 60.531 55.000 0.00 0.00 0.00 3.16
3875 4301 1.276844 GCATCGTATCGGCAAGTGC 59.723 57.895 0.00 0.00 41.14 4.40
3876 4302 1.428370 GCATCGTATCGGCAAGTGCA 61.428 55.000 5.52 0.00 44.36 4.57
3877 4303 0.301687 CATCGTATCGGCAAGTGCAC 59.698 55.000 9.40 9.40 44.36 4.57
3878 4304 0.108377 ATCGTATCGGCAAGTGCACA 60.108 50.000 21.04 0.00 44.36 4.57
3879 4305 0.108377 TCGTATCGGCAAGTGCACAT 60.108 50.000 21.04 3.48 44.36 3.21
3880 4306 0.026674 CGTATCGGCAAGTGCACATG 59.973 55.000 21.04 19.15 44.36 3.21
3881 4307 0.378257 GTATCGGCAAGTGCACATGG 59.622 55.000 22.38 10.70 44.36 3.66
3882 4308 1.375853 TATCGGCAAGTGCACATGGC 61.376 55.000 31.65 31.65 44.36 4.40
3883 4309 4.424566 CGGCAAGTGCACATGGCC 62.425 66.667 33.83 30.26 43.89 5.36
3884 4310 3.304721 GGCAAGTGCACATGGCCA 61.305 61.111 31.45 8.56 44.01 5.36
3885 4311 2.735883 GCAAGTGCACATGGCCAA 59.264 55.556 22.38 0.00 43.89 4.52
3886 4312 1.069427 GCAAGTGCACATGGCCAAA 59.931 52.632 22.38 0.00 43.89 3.28
3887 4313 1.223417 GCAAGTGCACATGGCCAAAC 61.223 55.000 22.38 3.46 43.89 2.93
3888 4314 0.104487 CAAGTGCACATGGCCAAACA 59.896 50.000 21.04 2.33 43.89 2.83
3889 4315 0.390124 AAGTGCACATGGCCAAACAG 59.610 50.000 21.04 2.43 43.89 3.16
3890 4316 1.665599 GTGCACATGGCCAAACAGC 60.666 57.895 10.96 12.85 43.89 4.40
3891 4317 2.431260 GCACATGGCCAAACAGCG 60.431 61.111 10.96 0.00 36.11 5.18
3892 4318 2.431260 CACATGGCCAAACAGCGC 60.431 61.111 10.96 0.00 0.00 5.92
3893 4319 2.598394 ACATGGCCAAACAGCGCT 60.598 55.556 10.96 2.64 0.00 5.92
3894 4320 2.126228 CATGGCCAAACAGCGCTG 60.126 61.111 34.89 34.89 0.00 5.18
3895 4321 4.060038 ATGGCCAAACAGCGCTGC 62.060 61.111 36.28 22.19 0.00 5.25
3897 4323 3.055719 GGCCAAACAGCGCTGCTA 61.056 61.111 36.28 0.00 36.40 3.49
3898 4324 2.409870 GGCCAAACAGCGCTGCTAT 61.410 57.895 36.28 20.45 36.40 2.97
3899 4325 1.095228 GGCCAAACAGCGCTGCTATA 61.095 55.000 36.28 0.00 36.40 1.31
3900 4326 0.028110 GCCAAACAGCGCTGCTATAC 59.972 55.000 36.28 19.74 36.40 1.47
3901 4327 1.368641 CCAAACAGCGCTGCTATACA 58.631 50.000 36.28 0.00 36.40 2.29
3902 4328 1.062587 CCAAACAGCGCTGCTATACAC 59.937 52.381 36.28 0.00 36.40 2.90
3903 4329 1.731709 CAAACAGCGCTGCTATACACA 59.268 47.619 36.28 0.00 36.40 3.72
3904 4330 1.359848 AACAGCGCTGCTATACACAC 58.640 50.000 36.28 0.00 36.40 3.82
3905 4331 0.802222 ACAGCGCTGCTATACACACG 60.802 55.000 36.28 9.45 36.40 4.49
3906 4332 0.525455 CAGCGCTGCTATACACACGA 60.525 55.000 26.68 0.00 36.40 4.35
3907 4333 0.525668 AGCGCTGCTATACACACGAC 60.526 55.000 10.39 0.00 36.99 4.34
3908 4334 1.798368 GCGCTGCTATACACACGACG 61.798 60.000 0.00 0.00 0.00 5.12
3909 4335 0.247934 CGCTGCTATACACACGACGA 60.248 55.000 0.00 0.00 0.00 4.20
3910 4336 1.792632 CGCTGCTATACACACGACGAA 60.793 52.381 0.00 0.00 0.00 3.85
3911 4337 1.846782 GCTGCTATACACACGACGAAG 59.153 52.381 0.00 0.00 0.00 3.79
3912 4338 2.477357 GCTGCTATACACACGACGAAGA 60.477 50.000 0.00 0.00 0.00 2.87
3913 4339 3.792459 GCTGCTATACACACGACGAAGAT 60.792 47.826 0.00 0.00 0.00 2.40
3914 4340 3.691498 TGCTATACACACGACGAAGATG 58.309 45.455 0.00 0.00 0.00 2.90
3915 4341 3.043586 GCTATACACACGACGAAGATGG 58.956 50.000 0.00 0.00 0.00 3.51
3916 4342 2.579207 ATACACACGACGAAGATGGG 57.421 50.000 0.00 0.00 0.00 4.00
3917 4343 0.528924 TACACACGACGAAGATGGGG 59.471 55.000 0.00 0.00 0.00 4.96
3918 4344 2.100631 CACACGACGAAGATGGGGC 61.101 63.158 0.00 0.00 0.00 5.80
3919 4345 2.511600 CACGACGAAGATGGGGCC 60.512 66.667 0.00 0.00 0.00 5.80
3920 4346 4.143333 ACGACGAAGATGGGGCCG 62.143 66.667 0.00 0.00 0.00 6.13
3921 4347 3.833645 CGACGAAGATGGGGCCGA 61.834 66.667 0.00 0.00 0.00 5.54
3922 4348 2.202892 GACGAAGATGGGGCCGAC 60.203 66.667 0.00 0.00 0.00 4.79
3923 4349 4.143333 ACGAAGATGGGGCCGACG 62.143 66.667 0.00 0.00 0.00 5.12
3935 4361 2.202690 CCGACGCCTGCACGATTA 60.203 61.111 3.48 0.00 36.70 1.75
3936 4362 1.591594 CCGACGCCTGCACGATTAT 60.592 57.895 3.48 0.00 36.70 1.28
3937 4363 1.151777 CCGACGCCTGCACGATTATT 61.152 55.000 3.48 0.00 36.70 1.40
3938 4364 1.483316 CGACGCCTGCACGATTATTA 58.517 50.000 3.48 0.00 36.70 0.98
3939 4365 1.189446 CGACGCCTGCACGATTATTAC 59.811 52.381 3.48 0.00 36.70 1.89
3940 4366 1.189446 GACGCCTGCACGATTATTACG 59.811 52.381 3.48 0.00 36.70 3.18
3941 4367 1.205657 CGCCTGCACGATTATTACGT 58.794 50.000 0.00 0.00 44.83 3.57
3950 4376 3.192466 ACGATTATTACGTGGAAGCACC 58.808 45.455 0.00 0.00 42.37 5.01
3959 4385 3.631453 TGGAAGCACCAACAGCTAG 57.369 52.632 0.11 0.00 46.75 3.42
3960 4386 0.606401 TGGAAGCACCAACAGCTAGC 60.606 55.000 6.62 6.62 46.75 3.42
3961 4387 1.639298 GGAAGCACCAACAGCTAGCG 61.639 60.000 9.55 7.05 42.53 4.26
3962 4388 0.951040 GAAGCACCAACAGCTAGCGT 60.951 55.000 9.55 7.74 42.53 5.07
3963 4389 1.230635 AAGCACCAACAGCTAGCGTG 61.231 55.000 9.55 11.90 42.53 5.34
3964 4390 2.863153 CACCAACAGCTAGCGTGC 59.137 61.111 9.55 0.00 0.00 5.34
3965 4391 1.960763 CACCAACAGCTAGCGTGCA 60.961 57.895 9.55 0.00 34.99 4.57
3966 4392 1.003355 ACCAACAGCTAGCGTGCAT 60.003 52.632 9.55 0.00 34.99 3.96
3967 4393 1.300971 ACCAACAGCTAGCGTGCATG 61.301 55.000 9.55 0.09 34.99 4.06
3968 4394 1.226211 CAACAGCTAGCGTGCATGC 60.226 57.895 23.58 23.58 34.99 4.06
3969 4395 1.672030 AACAGCTAGCGTGCATGCA 60.672 52.632 31.36 18.46 37.31 3.96
3970 4396 1.642037 AACAGCTAGCGTGCATGCAG 61.642 55.000 31.36 24.67 37.31 4.41
3971 4397 2.513204 AGCTAGCGTGCATGCAGG 60.513 61.111 30.93 30.93 37.31 4.85
3972 4398 2.512286 GCTAGCGTGCATGCAGGA 60.512 61.111 37.16 20.28 37.31 3.86
3973 4399 2.532256 GCTAGCGTGCATGCAGGAG 61.532 63.158 37.16 27.68 37.31 3.69
3974 4400 1.142531 CTAGCGTGCATGCAGGAGA 59.857 57.895 37.16 24.09 37.31 3.71
3975 4401 0.460811 CTAGCGTGCATGCAGGAGAA 60.461 55.000 37.16 22.02 37.31 2.87
3976 4402 0.740868 TAGCGTGCATGCAGGAGAAC 60.741 55.000 37.16 22.13 37.31 3.01
3977 4403 2.327343 GCGTGCATGCAGGAGAACA 61.327 57.895 37.16 5.22 34.13 3.18
3978 4404 1.792301 CGTGCATGCAGGAGAACAG 59.208 57.895 31.46 8.01 34.13 3.16
3979 4405 0.952497 CGTGCATGCAGGAGAACAGT 60.952 55.000 31.46 0.00 34.13 3.55
3980 4406 1.242076 GTGCATGCAGGAGAACAGTT 58.758 50.000 23.41 0.00 0.00 3.16
3981 4407 1.068748 GTGCATGCAGGAGAACAGTTG 60.069 52.381 23.41 0.00 0.00 3.16
3982 4408 0.524862 GCATGCAGGAGAACAGTTGG 59.475 55.000 14.21 0.00 0.00 3.77
3983 4409 1.171308 CATGCAGGAGAACAGTTGGG 58.829 55.000 0.00 0.00 0.00 4.12
3984 4410 1.067295 ATGCAGGAGAACAGTTGGGA 58.933 50.000 0.00 0.00 0.00 4.37
3985 4411 0.843309 TGCAGGAGAACAGTTGGGAA 59.157 50.000 0.00 0.00 0.00 3.97
3986 4412 1.202806 TGCAGGAGAACAGTTGGGAAG 60.203 52.381 0.00 0.00 0.00 3.46
3987 4413 1.072331 GCAGGAGAACAGTTGGGAAGA 59.928 52.381 0.00 0.00 0.00 2.87
3988 4414 2.487265 GCAGGAGAACAGTTGGGAAGAA 60.487 50.000 0.00 0.00 0.00 2.52
3989 4415 3.820557 CAGGAGAACAGTTGGGAAGAAA 58.179 45.455 0.00 0.00 0.00 2.52
3990 4416 3.817647 CAGGAGAACAGTTGGGAAGAAAG 59.182 47.826 0.00 0.00 0.00 2.62
3991 4417 2.554462 GGAGAACAGTTGGGAAGAAAGC 59.446 50.000 0.00 0.00 0.00 3.51
3992 4418 3.214328 GAGAACAGTTGGGAAGAAAGCA 58.786 45.455 0.00 0.00 0.00 3.91
3993 4419 3.823304 GAGAACAGTTGGGAAGAAAGCAT 59.177 43.478 0.00 0.00 0.00 3.79
3994 4420 3.823304 AGAACAGTTGGGAAGAAAGCATC 59.177 43.478 0.00 0.00 0.00 3.91
3995 4421 3.228188 ACAGTTGGGAAGAAAGCATCA 57.772 42.857 0.00 0.00 0.00 3.07
3996 4422 3.771216 ACAGTTGGGAAGAAAGCATCAT 58.229 40.909 0.00 0.00 0.00 2.45
3997 4423 4.154942 ACAGTTGGGAAGAAAGCATCATT 58.845 39.130 0.00 0.00 0.00 2.57
3998 4424 4.219288 ACAGTTGGGAAGAAAGCATCATTC 59.781 41.667 0.00 0.00 0.00 2.67
3999 4425 3.441572 AGTTGGGAAGAAAGCATCATTCG 59.558 43.478 0.00 0.00 32.04 3.34
4000 4426 1.745087 TGGGAAGAAAGCATCATTCGC 59.255 47.619 0.00 0.00 35.75 4.70
4001 4427 1.745087 GGGAAGAAAGCATCATTCGCA 59.255 47.619 0.00 0.00 35.41 5.10
4002 4428 2.223433 GGGAAGAAAGCATCATTCGCAG 60.223 50.000 0.00 0.00 35.41 5.18
4003 4429 2.679837 GGAAGAAAGCATCATTCGCAGA 59.320 45.455 0.00 0.00 32.04 4.26
4004 4430 3.314635 GGAAGAAAGCATCATTCGCAGAT 59.685 43.478 0.00 0.00 35.04 2.90
4005 4431 4.525686 GAAGAAAGCATCATTCGCAGATC 58.474 43.478 0.00 0.00 35.04 2.75
4006 4432 2.543012 AGAAAGCATCATTCGCAGATCG 59.457 45.455 0.00 0.00 35.04 3.69
4007 4433 1.945387 AAGCATCATTCGCAGATCGT 58.055 45.000 0.00 0.00 39.67 3.73
4008 4434 1.215244 AGCATCATTCGCAGATCGTG 58.785 50.000 0.00 0.00 39.67 4.35
4009 4435 0.933097 GCATCATTCGCAGATCGTGT 59.067 50.000 0.00 0.00 39.67 4.49
4010 4436 1.332640 GCATCATTCGCAGATCGTGTG 60.333 52.381 0.00 0.00 39.67 3.82
4011 4437 0.933097 ATCATTCGCAGATCGTGTGC 59.067 50.000 0.00 0.00 39.67 4.57
4012 4438 0.389687 TCATTCGCAGATCGTGTGCA 60.390 50.000 6.28 0.00 41.26 4.57
4013 4439 0.443478 CATTCGCAGATCGTGTGCAA 59.557 50.000 6.28 1.04 41.26 4.08
4014 4440 1.136000 CATTCGCAGATCGTGTGCAAA 60.136 47.619 6.28 0.00 41.26 3.68
4015 4441 0.234625 TTCGCAGATCGTGTGCAAAC 59.765 50.000 0.00 0.00 41.26 2.93
4016 4442 0.599991 TCGCAGATCGTGTGCAAACT 60.600 50.000 5.28 0.00 41.26 2.66
4017 4443 0.451628 CGCAGATCGTGTGCAAACTG 60.452 55.000 5.28 0.00 41.26 3.16
4018 4444 0.588252 GCAGATCGTGTGCAAACTGT 59.412 50.000 5.28 0.00 40.86 3.55
4019 4445 1.398960 GCAGATCGTGTGCAAACTGTC 60.399 52.381 5.28 3.04 40.86 3.51
4020 4446 1.866601 CAGATCGTGTGCAAACTGTCA 59.133 47.619 5.28 0.00 0.00 3.58
4021 4447 2.481568 CAGATCGTGTGCAAACTGTCAT 59.518 45.455 5.28 0.00 0.00 3.06
4022 4448 2.738846 AGATCGTGTGCAAACTGTCATC 59.261 45.455 5.28 1.73 0.00 2.92
4023 4449 2.238942 TCGTGTGCAAACTGTCATCT 57.761 45.000 5.28 0.00 0.00 2.90
4024 4450 1.866601 TCGTGTGCAAACTGTCATCTG 59.133 47.619 5.28 0.00 0.00 2.90
4025 4451 1.599071 CGTGTGCAAACTGTCATCTGT 59.401 47.619 5.28 0.00 0.00 3.41
4026 4452 2.600556 CGTGTGCAAACTGTCATCTGTG 60.601 50.000 5.28 0.00 0.00 3.66
4027 4453 2.613595 GTGTGCAAACTGTCATCTGTGA 59.386 45.455 0.00 0.00 0.00 3.58
4028 4454 3.065233 GTGTGCAAACTGTCATCTGTGAA 59.935 43.478 0.00 0.00 35.80 3.18
4029 4455 3.313249 TGTGCAAACTGTCATCTGTGAAG 59.687 43.478 0.00 0.00 35.80 3.02
4030 4456 2.291465 TGCAAACTGTCATCTGTGAAGC 59.709 45.455 0.00 0.00 35.80 3.86
4031 4457 2.291465 GCAAACTGTCATCTGTGAAGCA 59.709 45.455 0.00 0.00 35.80 3.91
4032 4458 3.243168 GCAAACTGTCATCTGTGAAGCAA 60.243 43.478 0.00 0.00 35.80 3.91
4033 4459 4.558095 GCAAACTGTCATCTGTGAAGCAAT 60.558 41.667 0.00 0.00 35.80 3.56
4034 4460 5.526115 CAAACTGTCATCTGTGAAGCAATT 58.474 37.500 0.00 0.00 35.80 2.32
4035 4461 5.779529 AACTGTCATCTGTGAAGCAATTT 57.220 34.783 0.00 0.00 35.80 1.82
4036 4462 5.368256 ACTGTCATCTGTGAAGCAATTTC 57.632 39.130 0.00 0.00 35.80 2.17
4037 4463 4.217118 ACTGTCATCTGTGAAGCAATTTCC 59.783 41.667 0.00 0.00 35.80 3.13
4038 4464 4.143543 TGTCATCTGTGAAGCAATTTCCA 58.856 39.130 0.00 0.00 35.80 3.53
4039 4465 4.768448 TGTCATCTGTGAAGCAATTTCCAT 59.232 37.500 0.00 0.00 35.80 3.41
4040 4466 5.100259 GTCATCTGTGAAGCAATTTCCATG 58.900 41.667 0.00 0.00 35.80 3.66
4041 4467 4.158949 TCATCTGTGAAGCAATTTCCATGG 59.841 41.667 4.97 4.97 34.77 3.66
4042 4468 2.231964 TCTGTGAAGCAATTTCCATGGC 59.768 45.455 6.96 0.00 34.77 4.40
4043 4469 1.275856 TGTGAAGCAATTTCCATGGCC 59.724 47.619 6.96 0.00 34.77 5.36
4044 4470 1.275856 GTGAAGCAATTTCCATGGCCA 59.724 47.619 8.56 8.56 34.77 5.36
4045 4471 1.976404 TGAAGCAATTTCCATGGCCAA 59.024 42.857 10.96 2.38 34.77 4.52
4046 4472 2.371179 TGAAGCAATTTCCATGGCCAAA 59.629 40.909 10.96 3.70 34.77 3.28
4047 4473 3.009253 TGAAGCAATTTCCATGGCCAAAT 59.991 39.130 10.96 6.21 34.77 2.32
4048 4474 2.993937 AGCAATTTCCATGGCCAAATG 58.006 42.857 10.96 3.90 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 97 1.229241 TCCACCGTGTCCATACCCA 60.229 57.895 0.00 0.00 0.00 4.51
155 156 6.914259 TCAAATCCATACAATTACGTGCAAA 58.086 32.000 0.00 0.00 0.00 3.68
188 189 9.004717 TCTTTTTCACAACCGAATACATCAATA 57.995 29.630 0.00 0.00 0.00 1.90
199 200 7.547370 ACATCAAATTTTCTTTTTCACAACCGA 59.453 29.630 0.00 0.00 0.00 4.69
244 245 6.226052 TCAAATCTATAGTAGGACGCGTCTA 58.774 40.000 35.50 23.01 0.00 2.59
368 369 1.133025 GATTCACCGGAACAATGGCAG 59.867 52.381 9.46 0.00 35.46 4.85
447 448 7.711772 TGAAAAATGCCATCAAATGATATGTCC 59.288 33.333 0.00 0.00 32.63 4.02
453 454 7.989416 AAAGTGAAAAATGCCATCAAATGAT 57.011 28.000 0.00 0.00 34.56 2.45
539 541 1.067565 CATGTCTGTCGTAGCACACCT 60.068 52.381 0.00 0.00 0.00 4.00
629 631 4.156922 TGCACAAATGTAATAGGGTTTCCG 59.843 41.667 0.00 0.00 38.33 4.30
638 640 4.033472 CCGACGTCATGCACAAATGTAATA 59.967 41.667 17.16 0.00 0.00 0.98
641 643 1.729517 CCGACGTCATGCACAAATGTA 59.270 47.619 17.16 0.00 0.00 2.29
677 1005 6.737720 AGGATGCATCTAGACATGACTTAA 57.262 37.500 25.28 0.00 0.00 1.85
714 1074 6.572703 GCACGAATTTTCTTTTTGGGGGTATA 60.573 38.462 0.00 0.00 0.00 1.47
724 1084 4.261867 GGTAGGTGGCACGAATTTTCTTTT 60.262 41.667 12.17 0.00 0.00 2.27
742 1102 6.870971 TTAGTTTGTTGCTTAGTTGGTAGG 57.129 37.500 0.00 0.00 0.00 3.18
767 1127 2.852449 TCCTGCCTGTAATCCATCCTTT 59.148 45.455 0.00 0.00 0.00 3.11
785 1145 2.582636 AGCCACAAATACCAAGGATCCT 59.417 45.455 9.02 9.02 0.00 3.24
793 1153 0.107410 CGGGCTAGCCACAAATACCA 60.107 55.000 34.09 0.00 37.98 3.25
873 1233 5.611128 AGTAGATTGCAGATCTCACATGT 57.389 39.130 12.69 0.00 0.00 3.21
970 1332 0.527600 TCCGATCACGTGCATGCTAC 60.528 55.000 20.33 13.98 37.88 3.58
1037 1423 1.447489 CAGCTCTGAACTGGCTCGG 60.447 63.158 0.06 0.00 33.74 4.63
1039 1425 1.206610 TGATCAGCTCTGAACTGGCTC 59.793 52.381 8.12 6.46 43.58 4.70
1120 1506 2.094659 CACCAGCGGCTTCACGTAG 61.095 63.158 0.00 0.00 35.98 3.51
1610 1996 0.988832 TAGGGCCGAAATGGTTGAGT 59.011 50.000 0.00 0.00 41.21 3.41
1683 2078 2.575461 GGGTTCTCGTGTACCCGG 59.425 66.667 15.34 0.00 42.56 5.73
1861 2259 2.700773 GCATGCCCTGGTTTCGTCC 61.701 63.158 6.36 0.00 0.00 4.79
2161 2559 2.959421 AGACCTTGATCCTCCTCCTT 57.041 50.000 0.00 0.00 0.00 3.36
2284 2682 3.887621 ACATGGCGTGTGACTTACTAT 57.112 42.857 12.39 0.00 40.28 2.12
2299 2697 4.878439 CAAGATATGGATGGCAAACATGG 58.122 43.478 15.04 0.19 40.72 3.66
2313 2711 8.137437 GGAACACAAAATGGTATCCAAGATATG 58.863 37.037 0.00 0.00 36.95 1.78
2314 2712 8.061304 AGGAACACAAAATGGTATCCAAGATAT 58.939 33.333 0.00 0.00 36.95 1.63
2321 2720 7.013369 GGAATCTAGGAACACAAAATGGTATCC 59.987 40.741 0.00 0.00 32.57 2.59
2327 2726 5.393461 GGCAGGAATCTAGGAACACAAAATG 60.393 44.000 0.00 0.00 0.00 2.32
2356 2759 9.463443 GCTTAAAGAACTGACAAAACATTGTAT 57.537 29.630 0.00 0.00 34.90 2.29
2359 2762 7.992180 AGCTTAAAGAACTGACAAAACATTG 57.008 32.000 0.00 0.00 0.00 2.82
2405 2823 5.937111 ACCAATTAGGCAACCGACTATAAT 58.063 37.500 0.00 0.00 43.14 1.28
2420 2838 5.947228 TTCAGCAGAACAGAACCAATTAG 57.053 39.130 0.00 0.00 0.00 1.73
2457 2875 9.230122 TCAAGCACAGATCAGATACAAATTAAA 57.770 29.630 0.00 0.00 0.00 1.52
2461 2879 5.821470 CCTCAAGCACAGATCAGATACAAAT 59.179 40.000 0.00 0.00 0.00 2.32
2487 2905 2.515854 AGAGTCAGAGACGCCTGTTAA 58.484 47.619 0.00 0.00 37.67 2.01
2491 2909 1.270826 TGAAAGAGTCAGAGACGCCTG 59.729 52.381 0.00 0.00 37.67 4.85
2492 2910 1.621992 TGAAAGAGTCAGAGACGCCT 58.378 50.000 0.00 0.00 37.67 5.52
2517 2935 3.909732 TGTAGGCCCCCATTTTCATTAG 58.090 45.455 0.00 0.00 0.00 1.73
2532 2950 7.824289 TGCTATGGAGTGATAATTATTGTAGGC 59.176 37.037 0.00 0.00 0.00 3.93
2558 2976 8.804912 ATGAGCTACTGATTTCTCTCAAAATT 57.195 30.769 0.00 0.00 34.72 1.82
2559 2977 9.323985 GTATGAGCTACTGATTTCTCTCAAAAT 57.676 33.333 0.00 0.00 34.72 1.82
2573 2991 1.678627 AGAGGCGTGTATGAGCTACTG 59.321 52.381 0.00 0.00 0.00 2.74
2669 3087 7.604545 GGAGATTAGATTTAGCCATGAAGGTAC 59.395 40.741 0.00 0.00 40.61 3.34
2697 3115 5.221244 GCTTTTTCTGTCCCTTGTACAACAT 60.221 40.000 3.59 0.00 0.00 2.71
2715 3136 1.142965 GTTGGCGGGTGTGCTTTTT 59.857 52.632 0.00 0.00 34.52 1.94
2716 3137 2.811799 GTTGGCGGGTGTGCTTTT 59.188 55.556 0.00 0.00 34.52 2.27
2717 3138 3.591835 CGTTGGCGGGTGTGCTTT 61.592 61.111 0.00 0.00 34.52 3.51
2732 3153 1.971357 CTGGAGGTAGCCATATTCCGT 59.029 52.381 0.00 0.00 37.30 4.69
2771 3192 1.154016 CACGAGACACCGCTACCTG 60.154 63.158 0.00 0.00 0.00 4.00
2815 3240 3.200165 AGGACCATAAAACTCACCCTAGC 59.800 47.826 0.00 0.00 0.00 3.42
2817 3242 5.104652 GCTAAGGACCATAAAACTCACCCTA 60.105 44.000 0.00 0.00 0.00 3.53
2818 3243 4.324331 GCTAAGGACCATAAAACTCACCCT 60.324 45.833 0.00 0.00 0.00 4.34
2886 3311 2.172293 AGCAGGGGAAGAATCTGATGAC 59.828 50.000 0.00 0.00 0.00 3.06
2927 3352 5.179368 ACATAATTATGGCTGTATGACGCAC 59.821 40.000 25.45 0.00 38.00 5.34
2937 3362 4.524328 GGGGAGGAAACATAATTATGGCTG 59.476 45.833 25.45 6.36 38.00 4.85
2963 3388 1.724623 GTACGAGCAGTTGCATCGAAA 59.275 47.619 22.94 13.03 45.16 3.46
2986 3411 2.105960 ATATCCGAAAGCGCGCTTGC 62.106 55.000 43.43 40.05 36.26 4.01
2987 3412 0.383491 CATATCCGAAAGCGCGCTTG 60.383 55.000 43.43 31.41 36.26 4.01
2988 3413 0.810031 ACATATCCGAAAGCGCGCTT 60.810 50.000 38.88 38.88 37.98 4.68
2989 3414 0.810031 AACATATCCGAAAGCGCGCT 60.810 50.000 31.32 31.32 35.83 5.92
2990 3415 0.654472 CAACATATCCGAAAGCGCGC 60.654 55.000 26.66 26.66 35.83 6.86
2991 3416 0.927537 TCAACATATCCGAAAGCGCG 59.072 50.000 0.00 0.00 35.83 6.86
2992 3417 1.933853 ACTCAACATATCCGAAAGCGC 59.066 47.619 0.00 0.00 35.83 5.92
2993 3418 4.600012 AAACTCAACATATCCGAAAGCG 57.400 40.909 0.00 0.00 37.24 4.68
2994 3419 5.909610 GCATAAACTCAACATATCCGAAAGC 59.090 40.000 0.00 0.00 0.00 3.51
2995 3420 7.251704 AGCATAAACTCAACATATCCGAAAG 57.748 36.000 0.00 0.00 0.00 2.62
2996 3421 7.335673 TCAAGCATAAACTCAACATATCCGAAA 59.664 33.333 0.00 0.00 0.00 3.46
2997 3422 6.821160 TCAAGCATAAACTCAACATATCCGAA 59.179 34.615 0.00 0.00 0.00 4.30
2998 3423 6.345298 TCAAGCATAAACTCAACATATCCGA 58.655 36.000 0.00 0.00 0.00 4.55
2999 3424 6.603237 TCAAGCATAAACTCAACATATCCG 57.397 37.500 0.00 0.00 0.00 4.18
3000 3425 9.807649 ATTTTCAAGCATAAACTCAACATATCC 57.192 29.630 0.00 0.00 0.00 2.59
3005 3430 8.610896 CCAAAATTTTCAAGCATAAACTCAACA 58.389 29.630 0.00 0.00 0.00 3.33
3006 3431 8.825745 TCCAAAATTTTCAAGCATAAACTCAAC 58.174 29.630 0.00 0.00 0.00 3.18
3007 3432 8.954950 TCCAAAATTTTCAAGCATAAACTCAA 57.045 26.923 0.00 0.00 0.00 3.02
3008 3433 8.954950 TTCCAAAATTTTCAAGCATAAACTCA 57.045 26.923 0.00 0.00 0.00 3.41
3009 3434 9.650371 GTTTCCAAAATTTTCAAGCATAAACTC 57.350 29.630 0.00 0.00 0.00 3.01
3010 3435 9.171877 TGTTTCCAAAATTTTCAAGCATAAACT 57.828 25.926 0.00 0.00 0.00 2.66
3011 3436 9.780413 TTGTTTCCAAAATTTTCAAGCATAAAC 57.220 25.926 0.00 5.27 0.00 2.01
3119 3545 2.203394 CCCATTCCTCGGGCCATG 60.203 66.667 4.39 0.00 36.72 3.66
3200 3626 5.597813 ACAGTACTTTGCTTTTCGAGATG 57.402 39.130 0.00 0.00 0.00 2.90
3221 3647 5.086104 TGTGCCCTAGATAGACTCAAAAC 57.914 43.478 0.00 0.00 0.00 2.43
3225 3651 4.461450 AGATGTGCCCTAGATAGACTCA 57.539 45.455 0.00 0.00 0.00 3.41
3388 3814 7.547722 GTGTTGTGGTCTATGTATTCACACATA 59.452 37.037 0.00 0.00 39.77 2.29
3516 3942 5.065731 GTCTTGTCCATCACATCATTCTTCC 59.934 44.000 0.00 0.00 33.90 3.46
3518 3944 4.946157 GGTCTTGTCCATCACATCATTCTT 59.054 41.667 0.00 0.00 33.90 2.52
3577 4003 2.591715 AGCTTGGTGTGCGGTGAC 60.592 61.111 0.00 0.00 35.28 3.67
3578 4004 2.591429 CAGCTTGGTGTGCGGTGA 60.591 61.111 0.00 0.00 35.28 4.02
3579 4005 3.663176 CCAGCTTGGTGTGCGGTG 61.663 66.667 0.00 0.00 35.28 4.94
3580 4006 3.414136 TTCCAGCTTGGTGTGCGGT 62.414 57.895 0.00 0.00 39.03 5.68
3581 4007 2.594303 TTCCAGCTTGGTGTGCGG 60.594 61.111 0.00 0.00 39.03 5.69
3582 4008 2.949106 CTTCCAGCTTGGTGTGCG 59.051 61.111 0.00 0.00 39.03 5.34
3583 4009 2.647297 GCTTCCAGCTTGGTGTGC 59.353 61.111 0.00 0.00 39.03 4.57
3584 4010 2.620112 CGGCTTCCAGCTTGGTGTG 61.620 63.158 0.00 0.00 41.99 3.82
3585 4011 2.281761 CGGCTTCCAGCTTGGTGT 60.282 61.111 0.00 0.00 41.99 4.16
3586 4012 0.605319 TAACGGCTTCCAGCTTGGTG 60.605 55.000 0.00 0.00 41.99 4.17
3587 4013 0.605589 GTAACGGCTTCCAGCTTGGT 60.606 55.000 0.00 0.00 41.99 3.67
3588 4014 0.321653 AGTAACGGCTTCCAGCTTGG 60.322 55.000 0.00 0.00 41.99 3.61
3589 4015 1.079503 GAGTAACGGCTTCCAGCTTG 58.920 55.000 0.00 0.00 41.99 4.01
3590 4016 0.977395 AGAGTAACGGCTTCCAGCTT 59.023 50.000 0.00 0.00 41.99 3.74
3591 4017 0.533032 GAGAGTAACGGCTTCCAGCT 59.467 55.000 0.00 0.00 41.99 4.24
3592 4018 0.533032 AGAGAGTAACGGCTTCCAGC 59.467 55.000 0.00 0.00 41.46 4.85
3593 4019 2.096248 AGAGAGAGTAACGGCTTCCAG 58.904 52.381 0.00 0.00 0.00 3.86
3594 4020 2.217510 AGAGAGAGTAACGGCTTCCA 57.782 50.000 0.00 0.00 0.00 3.53
3595 4021 4.922471 ATTAGAGAGAGTAACGGCTTCC 57.078 45.455 0.00 0.00 0.00 3.46
3596 4022 7.204496 TGATATTAGAGAGAGTAACGGCTTC 57.796 40.000 0.00 0.00 0.00 3.86
3597 4023 7.584122 TTGATATTAGAGAGAGTAACGGCTT 57.416 36.000 0.00 0.00 0.00 4.35
3598 4024 7.584122 TTTGATATTAGAGAGAGTAACGGCT 57.416 36.000 0.00 0.00 0.00 5.52
3599 4025 8.644318 TTTTTGATATTAGAGAGAGTAACGGC 57.356 34.615 0.00 0.00 0.00 5.68
3623 4049 9.621629 TCGTTTGTCCCATAATATAAGAACATT 57.378 29.630 0.00 0.00 0.00 2.71
3624 4050 9.621629 TTCGTTTGTCCCATAATATAAGAACAT 57.378 29.630 0.00 0.00 0.00 2.71
3625 4051 9.451002 TTTCGTTTGTCCCATAATATAAGAACA 57.549 29.630 0.00 0.00 0.00 3.18
3630 4056 9.787435 AGCTATTTCGTTTGTCCCATAATATAA 57.213 29.630 0.00 0.00 0.00 0.98
3631 4057 9.787435 AAGCTATTTCGTTTGTCCCATAATATA 57.213 29.630 0.00 0.00 0.00 0.86
3632 4058 8.567948 CAAGCTATTTCGTTTGTCCCATAATAT 58.432 33.333 0.00 0.00 0.00 1.28
3633 4059 7.554835 ACAAGCTATTTCGTTTGTCCCATAATA 59.445 33.333 0.00 0.00 33.88 0.98
3634 4060 6.377146 ACAAGCTATTTCGTTTGTCCCATAAT 59.623 34.615 0.00 0.00 33.88 1.28
3635 4061 5.708230 ACAAGCTATTTCGTTTGTCCCATAA 59.292 36.000 0.00 0.00 33.88 1.90
3636 4062 5.250200 ACAAGCTATTTCGTTTGTCCCATA 58.750 37.500 0.00 0.00 33.88 2.74
3637 4063 4.079253 ACAAGCTATTTCGTTTGTCCCAT 58.921 39.130 0.00 0.00 33.88 4.00
3638 4064 3.482436 ACAAGCTATTTCGTTTGTCCCA 58.518 40.909 0.00 0.00 33.88 4.37
3639 4065 5.180680 ACTTACAAGCTATTTCGTTTGTCCC 59.819 40.000 0.00 0.00 38.84 4.46
3640 4066 6.077838 CACTTACAAGCTATTTCGTTTGTCC 58.922 40.000 0.00 0.00 38.84 4.02
3641 4067 6.573725 CACACTTACAAGCTATTTCGTTTGTC 59.426 38.462 0.00 0.00 38.84 3.18
3642 4068 6.037830 ACACACTTACAAGCTATTTCGTTTGT 59.962 34.615 0.00 0.00 40.61 2.83
3643 4069 6.356977 CACACACTTACAAGCTATTTCGTTTG 59.643 38.462 0.00 0.00 0.00 2.93
3644 4070 6.037830 ACACACACTTACAAGCTATTTCGTTT 59.962 34.615 0.00 0.00 0.00 3.60
3645 4071 5.526111 ACACACACTTACAAGCTATTTCGTT 59.474 36.000 0.00 0.00 0.00 3.85
3646 4072 5.050363 CACACACACTTACAAGCTATTTCGT 60.050 40.000 0.00 0.00 0.00 3.85
3647 4073 5.176774 TCACACACACTTACAAGCTATTTCG 59.823 40.000 0.00 0.00 0.00 3.46
3648 4074 6.539649 TCACACACACTTACAAGCTATTTC 57.460 37.500 0.00 0.00 0.00 2.17
3649 4075 7.510549 AATCACACACACTTACAAGCTATTT 57.489 32.000 0.00 0.00 0.00 1.40
3650 4076 7.510549 AAATCACACACACTTACAAGCTATT 57.489 32.000 0.00 0.00 0.00 1.73
3651 4077 8.792830 ATAAATCACACACACTTACAAGCTAT 57.207 30.769 0.00 0.00 0.00 2.97
3652 4078 7.333423 GGATAAATCACACACACTTACAAGCTA 59.667 37.037 0.00 0.00 0.00 3.32
3653 4079 6.149474 GGATAAATCACACACACTTACAAGCT 59.851 38.462 0.00 0.00 0.00 3.74
3654 4080 6.314784 GGATAAATCACACACACTTACAAGC 58.685 40.000 0.00 0.00 0.00 4.01
3655 4081 6.429692 TGGGATAAATCACACACACTTACAAG 59.570 38.462 0.00 0.00 34.77 3.16
3656 4082 6.299922 TGGGATAAATCACACACACTTACAA 58.700 36.000 0.00 0.00 34.77 2.41
3657 4083 5.870706 TGGGATAAATCACACACACTTACA 58.129 37.500 0.00 0.00 34.77 2.41
3667 4093 5.810095 TGTACATGTGTGGGATAAATCACA 58.190 37.500 9.11 0.00 43.30 3.58
3668 4094 6.751514 TTGTACATGTGTGGGATAAATCAC 57.248 37.500 9.11 0.00 34.71 3.06
3669 4095 7.767250 TTTTGTACATGTGTGGGATAAATCA 57.233 32.000 9.11 0.00 0.00 2.57
3672 4098 8.237949 CGTAATTTTGTACATGTGTGGGATAAA 58.762 33.333 9.11 0.00 0.00 1.40
3673 4099 7.626664 GCGTAATTTTGTACATGTGTGGGATAA 60.627 37.037 9.11 0.00 0.00 1.75
3674 4100 6.183360 GCGTAATTTTGTACATGTGTGGGATA 60.183 38.462 9.11 0.00 0.00 2.59
3675 4101 5.392595 GCGTAATTTTGTACATGTGTGGGAT 60.393 40.000 9.11 0.00 0.00 3.85
3676 4102 4.083217 GCGTAATTTTGTACATGTGTGGGA 60.083 41.667 9.11 0.00 0.00 4.37
3677 4103 4.162812 GCGTAATTTTGTACATGTGTGGG 58.837 43.478 9.11 0.00 0.00 4.61
3678 4104 3.843541 CGCGTAATTTTGTACATGTGTGG 59.156 43.478 9.11 0.00 0.00 4.17
3679 4105 4.317031 CACGCGTAATTTTGTACATGTGTG 59.683 41.667 13.44 0.00 30.17 3.82
3680 4106 4.459606 CACGCGTAATTTTGTACATGTGT 58.540 39.130 13.44 0.00 30.17 3.72
3681 4107 3.843541 CCACGCGTAATTTTGTACATGTG 59.156 43.478 13.44 0.00 32.56 3.21
3682 4108 3.747010 TCCACGCGTAATTTTGTACATGT 59.253 39.130 13.44 2.69 0.00 3.21
3683 4109 4.329296 TCCACGCGTAATTTTGTACATG 57.671 40.909 13.44 0.00 0.00 3.21
3684 4110 5.106475 ACATTCCACGCGTAATTTTGTACAT 60.106 36.000 13.44 0.00 0.00 2.29
3685 4111 4.213694 ACATTCCACGCGTAATTTTGTACA 59.786 37.500 13.44 0.00 0.00 2.90
3686 4112 4.714851 ACATTCCACGCGTAATTTTGTAC 58.285 39.130 13.44 0.00 0.00 2.90
3687 4113 5.638657 AGTACATTCCACGCGTAATTTTGTA 59.361 36.000 13.44 13.60 0.00 2.41
3688 4114 3.907894 ACATTCCACGCGTAATTTTGT 57.092 38.095 13.44 9.80 0.00 2.83
3689 4115 4.965062 AGTACATTCCACGCGTAATTTTG 58.035 39.130 13.44 9.11 0.00 2.44
3690 4116 5.616488 AAGTACATTCCACGCGTAATTTT 57.384 34.783 13.44 1.14 0.00 1.82
3691 4117 5.387279 CAAAGTACATTCCACGCGTAATTT 58.613 37.500 13.44 4.93 34.72 1.82
3692 4118 4.142773 CCAAAGTACATTCCACGCGTAATT 60.143 41.667 13.44 0.00 0.00 1.40
3693 4119 3.372822 CCAAAGTACATTCCACGCGTAAT 59.627 43.478 13.44 6.40 0.00 1.89
3694 4120 2.737783 CCAAAGTACATTCCACGCGTAA 59.262 45.455 13.44 3.54 0.00 3.18
3695 4121 2.029200 TCCAAAGTACATTCCACGCGTA 60.029 45.455 13.44 0.00 0.00 4.42
3696 4122 1.153353 CCAAAGTACATTCCACGCGT 58.847 50.000 5.58 5.58 0.00 6.01
3697 4123 1.127951 GTCCAAAGTACATTCCACGCG 59.872 52.381 3.53 3.53 0.00 6.01
3698 4124 1.467342 GGTCCAAAGTACATTCCACGC 59.533 52.381 0.00 0.00 0.00 5.34
3699 4125 2.742053 CAGGTCCAAAGTACATTCCACG 59.258 50.000 0.00 0.00 0.00 4.94
3700 4126 2.488153 GCAGGTCCAAAGTACATTCCAC 59.512 50.000 0.00 0.00 0.00 4.02
3701 4127 2.107378 TGCAGGTCCAAAGTACATTCCA 59.893 45.455 0.00 0.00 0.00 3.53
3702 4128 2.488153 GTGCAGGTCCAAAGTACATTCC 59.512 50.000 0.00 0.00 0.00 3.01
3703 4129 3.058224 GTGTGCAGGTCCAAAGTACATTC 60.058 47.826 0.00 0.00 30.91 2.67
3704 4130 2.884639 GTGTGCAGGTCCAAAGTACATT 59.115 45.455 0.00 0.00 30.91 2.71
3705 4131 2.504367 GTGTGCAGGTCCAAAGTACAT 58.496 47.619 0.00 0.00 30.91 2.29
3706 4132 1.808512 CGTGTGCAGGTCCAAAGTACA 60.809 52.381 0.00 0.00 0.00 2.90
3707 4133 0.865769 CGTGTGCAGGTCCAAAGTAC 59.134 55.000 0.00 0.00 0.00 2.73
3708 4134 0.466543 ACGTGTGCAGGTCCAAAGTA 59.533 50.000 0.00 0.00 0.00 2.24
3709 4135 0.393808 AACGTGTGCAGGTCCAAAGT 60.394 50.000 0.00 0.00 0.00 2.66
3710 4136 0.307760 GAACGTGTGCAGGTCCAAAG 59.692 55.000 0.00 0.00 0.00 2.77
3711 4137 0.393132 TGAACGTGTGCAGGTCCAAA 60.393 50.000 0.00 0.00 0.00 3.28
3712 4138 0.393132 TTGAACGTGTGCAGGTCCAA 60.393 50.000 0.00 0.00 0.00 3.53
3713 4139 0.813610 CTTGAACGTGTGCAGGTCCA 60.814 55.000 0.00 0.00 0.00 4.02
3714 4140 1.507141 CCTTGAACGTGTGCAGGTCC 61.507 60.000 0.00 0.00 0.00 4.46
3715 4141 1.941812 CCTTGAACGTGTGCAGGTC 59.058 57.895 0.00 0.00 0.00 3.85
3716 4142 2.186826 GCCTTGAACGTGTGCAGGT 61.187 57.895 0.00 0.00 0.00 4.00
3717 4143 1.723608 TTGCCTTGAACGTGTGCAGG 61.724 55.000 0.00 0.00 32.88 4.85
3718 4144 0.100325 TTTGCCTTGAACGTGTGCAG 59.900 50.000 0.00 0.00 32.88 4.41
3719 4145 0.528017 TTTTGCCTTGAACGTGTGCA 59.472 45.000 0.00 0.00 0.00 4.57
3720 4146 1.786579 GATTTTGCCTTGAACGTGTGC 59.213 47.619 0.00 0.00 0.00 4.57
3721 4147 2.788786 GTGATTTTGCCTTGAACGTGTG 59.211 45.455 0.00 0.00 0.00 3.82
3722 4148 2.425312 TGTGATTTTGCCTTGAACGTGT 59.575 40.909 0.00 0.00 0.00 4.49
3723 4149 3.077229 TGTGATTTTGCCTTGAACGTG 57.923 42.857 0.00 0.00 0.00 4.49
3724 4150 4.050553 CAATGTGATTTTGCCTTGAACGT 58.949 39.130 0.00 0.00 0.00 3.99
3725 4151 4.050553 ACAATGTGATTTTGCCTTGAACG 58.949 39.130 0.00 0.00 0.00 3.95
3726 4152 5.982516 TGTACAATGTGATTTTGCCTTGAAC 59.017 36.000 0.00 0.00 0.00 3.18
3727 4153 6.154203 TGTACAATGTGATTTTGCCTTGAA 57.846 33.333 0.00 0.00 0.00 2.69
3728 4154 5.278907 CCTGTACAATGTGATTTTGCCTTGA 60.279 40.000 0.00 0.00 0.00 3.02
3729 4155 4.925054 CCTGTACAATGTGATTTTGCCTTG 59.075 41.667 0.00 0.00 0.00 3.61
3730 4156 4.021192 CCCTGTACAATGTGATTTTGCCTT 60.021 41.667 0.00 0.00 0.00 4.35
3731 4157 3.511146 CCCTGTACAATGTGATTTTGCCT 59.489 43.478 0.00 0.00 0.00 4.75
3732 4158 3.258123 ACCCTGTACAATGTGATTTTGCC 59.742 43.478 0.00 0.00 0.00 4.52
3733 4159 4.519540 ACCCTGTACAATGTGATTTTGC 57.480 40.909 0.00 0.00 0.00 3.68
3734 4160 6.817765 AGTACCCTGTACAATGTGATTTTG 57.182 37.500 7.11 0.00 0.00 2.44
3735 4161 7.255801 CCAAAGTACCCTGTACAATGTGATTTT 60.256 37.037 7.11 0.00 0.00 1.82
3736 4162 6.208599 CCAAAGTACCCTGTACAATGTGATTT 59.791 38.462 7.11 0.96 0.00 2.17
3737 4163 5.710099 CCAAAGTACCCTGTACAATGTGATT 59.290 40.000 7.11 0.00 0.00 2.57
3738 4164 5.013704 TCCAAAGTACCCTGTACAATGTGAT 59.986 40.000 7.11 0.00 0.00 3.06
3739 4165 4.348461 TCCAAAGTACCCTGTACAATGTGA 59.652 41.667 7.11 3.29 0.00 3.58
3740 4166 4.454504 GTCCAAAGTACCCTGTACAATGTG 59.545 45.833 7.11 0.22 0.00 3.21
3741 4167 4.349930 AGTCCAAAGTACCCTGTACAATGT 59.650 41.667 7.11 0.00 0.00 2.71
3742 4168 4.906618 AGTCCAAAGTACCCTGTACAATG 58.093 43.478 7.11 5.20 0.00 2.82
3743 4169 5.313712 CAAGTCCAAAGTACCCTGTACAAT 58.686 41.667 7.11 0.00 0.00 2.71
3744 4170 4.710324 CAAGTCCAAAGTACCCTGTACAA 58.290 43.478 7.11 0.00 0.00 2.41
3745 4171 3.495453 GCAAGTCCAAAGTACCCTGTACA 60.495 47.826 7.11 0.00 0.00 2.90
3746 4172 3.072211 GCAAGTCCAAAGTACCCTGTAC 58.928 50.000 0.00 0.00 0.00 2.90
3747 4173 2.706723 TGCAAGTCCAAAGTACCCTGTA 59.293 45.455 0.00 0.00 0.00 2.74
3748 4174 1.493022 TGCAAGTCCAAAGTACCCTGT 59.507 47.619 0.00 0.00 0.00 4.00
3749 4175 1.880027 GTGCAAGTCCAAAGTACCCTG 59.120 52.381 0.00 0.00 0.00 4.45
3750 4176 1.493022 TGTGCAAGTCCAAAGTACCCT 59.507 47.619 0.00 0.00 0.00 4.34
3751 4177 1.607148 GTGTGCAAGTCCAAAGTACCC 59.393 52.381 0.00 0.00 0.00 3.69
3752 4178 1.263217 CGTGTGCAAGTCCAAAGTACC 59.737 52.381 0.00 0.00 0.00 3.34
3753 4179 1.263217 CCGTGTGCAAGTCCAAAGTAC 59.737 52.381 0.00 0.00 0.00 2.73
3754 4180 1.588674 CCGTGTGCAAGTCCAAAGTA 58.411 50.000 0.00 0.00 0.00 2.24
3755 4181 1.724582 GCCGTGTGCAAGTCCAAAGT 61.725 55.000 0.00 0.00 40.77 2.66
3756 4182 1.008538 GCCGTGTGCAAGTCCAAAG 60.009 57.895 0.00 0.00 40.77 2.77
3757 4183 2.485795 GGCCGTGTGCAAGTCCAAA 61.486 57.895 0.00 0.00 43.89 3.28
3758 4184 2.904866 GGCCGTGTGCAAGTCCAA 60.905 61.111 0.00 0.00 43.89 3.53
3759 4185 4.182433 TGGCCGTGTGCAAGTCCA 62.182 61.111 0.00 0.00 43.89 4.02
3760 4186 3.357079 CTGGCCGTGTGCAAGTCC 61.357 66.667 0.00 0.00 43.89 3.85
3761 4187 3.357079 CCTGGCCGTGTGCAAGTC 61.357 66.667 0.00 0.00 39.64 3.01
3766 4192 3.910490 TTTTGCCTGGCCGTGTGC 61.910 61.111 17.53 0.00 40.16 4.57
3767 4193 2.027460 GTTTTGCCTGGCCGTGTG 59.973 61.111 17.53 0.00 0.00 3.82
3768 4194 2.055042 TTGTTTTGCCTGGCCGTGT 61.055 52.632 17.53 0.00 0.00 4.49
3769 4195 1.591327 GTTGTTTTGCCTGGCCGTG 60.591 57.895 17.53 0.00 0.00 4.94
3770 4196 2.791868 GGTTGTTTTGCCTGGCCGT 61.792 57.895 17.53 0.00 0.00 5.68
3771 4197 2.028925 GGTTGTTTTGCCTGGCCG 59.971 61.111 17.53 0.00 0.00 6.13
3772 4198 2.028925 CGGTTGTTTTGCCTGGCC 59.971 61.111 17.53 0.00 0.00 5.36
3773 4199 1.591327 CACGGTTGTTTTGCCTGGC 60.591 57.895 12.87 12.87 0.00 4.85
3774 4200 0.248866 GACACGGTTGTTTTGCCTGG 60.249 55.000 0.00 0.00 35.47 4.45
3775 4201 0.738389 AGACACGGTTGTTTTGCCTG 59.262 50.000 0.00 0.00 35.47 4.85
3776 4202 0.738389 CAGACACGGTTGTTTTGCCT 59.262 50.000 0.00 0.00 35.47 4.75
3777 4203 0.736053 TCAGACACGGTTGTTTTGCC 59.264 50.000 0.00 0.00 35.47 4.52
3778 4204 2.223479 ACATCAGACACGGTTGTTTTGC 60.223 45.455 0.00 0.00 35.47 3.68
3779 4205 3.691049 ACATCAGACACGGTTGTTTTG 57.309 42.857 0.00 0.00 35.47 2.44
3780 4206 4.193090 TGTACATCAGACACGGTTGTTTT 58.807 39.130 0.00 0.00 35.47 2.43
3781 4207 3.799366 TGTACATCAGACACGGTTGTTT 58.201 40.909 0.00 0.00 35.47 2.83
3782 4208 3.462483 TGTACATCAGACACGGTTGTT 57.538 42.857 0.00 0.00 35.47 2.83
3783 4209 3.462483 TTGTACATCAGACACGGTTGT 57.538 42.857 0.00 0.00 39.32 3.32
3784 4210 5.356882 AAATTGTACATCAGACACGGTTG 57.643 39.130 0.00 0.00 0.00 3.77
3785 4211 7.499321 TTAAAATTGTACATCAGACACGGTT 57.501 32.000 0.00 0.00 0.00 4.44
3786 4212 7.681939 ATTAAAATTGTACATCAGACACGGT 57.318 32.000 0.00 0.00 0.00 4.83
3787 4213 8.964420 AAATTAAAATTGTACATCAGACACGG 57.036 30.769 0.00 0.00 0.00 4.94
3833 4259 5.359860 CCTCCGGAGCCAAAATAACTATTTT 59.640 40.000 26.87 2.27 44.27 1.82
3834 4260 4.887655 CCTCCGGAGCCAAAATAACTATTT 59.112 41.667 26.87 0.00 37.49 1.40
3835 4261 4.461198 CCTCCGGAGCCAAAATAACTATT 58.539 43.478 26.87 0.00 0.00 1.73
3836 4262 3.747708 GCCTCCGGAGCCAAAATAACTAT 60.748 47.826 26.87 0.00 0.00 2.12
3837 4263 2.420967 GCCTCCGGAGCCAAAATAACTA 60.421 50.000 26.87 0.00 0.00 2.24
3838 4264 1.682087 GCCTCCGGAGCCAAAATAACT 60.682 52.381 26.87 0.00 0.00 2.24
3839 4265 0.738975 GCCTCCGGAGCCAAAATAAC 59.261 55.000 26.87 2.28 0.00 1.89
3840 4266 0.329931 TGCCTCCGGAGCCAAAATAA 59.670 50.000 26.87 0.00 0.00 1.40
3841 4267 0.550914 ATGCCTCCGGAGCCAAAATA 59.449 50.000 26.87 0.00 0.00 1.40
3842 4268 0.753111 GATGCCTCCGGAGCCAAAAT 60.753 55.000 26.87 13.34 0.00 1.82
3843 4269 1.378514 GATGCCTCCGGAGCCAAAA 60.379 57.895 26.87 8.97 0.00 2.44
3844 4270 2.272146 GATGCCTCCGGAGCCAAA 59.728 61.111 26.87 10.82 0.00 3.28
3845 4271 4.161295 CGATGCCTCCGGAGCCAA 62.161 66.667 26.87 13.45 0.00 4.52
3847 4273 2.493907 GATACGATGCCTCCGGAGCC 62.494 65.000 26.87 16.88 0.00 4.70
3848 4274 1.080434 GATACGATGCCTCCGGAGC 60.080 63.158 26.87 20.75 0.00 4.70
3849 4275 1.210413 CGATACGATGCCTCCGGAG 59.790 63.158 25.36 25.36 0.00 4.63
3850 4276 2.265904 CCGATACGATGCCTCCGGA 61.266 63.158 2.93 2.93 39.31 5.14
3851 4277 2.258591 CCGATACGATGCCTCCGG 59.741 66.667 0.00 0.00 0.00 5.14
3852 4278 2.430921 GCCGATACGATGCCTCCG 60.431 66.667 0.00 0.00 0.00 4.63
3853 4279 0.946221 CTTGCCGATACGATGCCTCC 60.946 60.000 0.00 0.00 0.00 4.30
3854 4280 0.249489 ACTTGCCGATACGATGCCTC 60.249 55.000 0.00 0.00 0.00 4.70
3855 4281 0.530650 CACTTGCCGATACGATGCCT 60.531 55.000 0.00 0.00 0.00 4.75
3856 4282 1.934463 CACTTGCCGATACGATGCC 59.066 57.895 0.00 0.00 0.00 4.40
3857 4283 1.276844 GCACTTGCCGATACGATGC 59.723 57.895 0.00 0.00 34.31 3.91
3858 4284 0.301687 GTGCACTTGCCGATACGATG 59.698 55.000 10.32 0.00 41.18 3.84
3859 4285 0.108377 TGTGCACTTGCCGATACGAT 60.108 50.000 19.41 0.00 41.18 3.73
3860 4286 0.108377 ATGTGCACTTGCCGATACGA 60.108 50.000 19.41 0.00 41.18 3.43
3861 4287 0.026674 CATGTGCACTTGCCGATACG 59.973 55.000 19.41 0.00 41.18 3.06
3862 4288 0.378257 CCATGTGCACTTGCCGATAC 59.622 55.000 23.58 0.00 41.18 2.24
3863 4289 1.375853 GCCATGTGCACTTGCCGATA 61.376 55.000 23.58 0.00 41.18 2.92
3864 4290 2.703798 GCCATGTGCACTTGCCGAT 61.704 57.895 23.58 3.33 41.18 4.18
3865 4291 3.364441 GCCATGTGCACTTGCCGA 61.364 61.111 23.58 0.81 41.18 5.54
3866 4292 4.424566 GGCCATGTGCACTTGCCG 62.425 66.667 23.58 13.99 43.89 5.69
3867 4293 2.380433 TTTGGCCATGTGCACTTGCC 62.380 55.000 27.27 27.27 43.89 4.52
3868 4294 1.069427 TTTGGCCATGTGCACTTGC 59.931 52.632 23.58 18.97 43.89 4.01
3869 4295 0.104487 TGTTTGGCCATGTGCACTTG 59.896 50.000 22.39 22.39 43.89 3.16
3870 4296 0.390124 CTGTTTGGCCATGTGCACTT 59.610 50.000 19.41 9.21 43.89 3.16
3871 4297 2.043625 CTGTTTGGCCATGTGCACT 58.956 52.632 19.41 0.15 43.89 4.40
3872 4298 1.665599 GCTGTTTGGCCATGTGCAC 60.666 57.895 6.09 10.75 43.89 4.57
3873 4299 2.735883 GCTGTTTGGCCATGTGCA 59.264 55.556 6.09 2.34 43.89 4.57
3874 4300 2.431260 CGCTGTTTGGCCATGTGC 60.431 61.111 6.09 8.40 40.16 4.57
3875 4301 2.431260 GCGCTGTTTGGCCATGTG 60.431 61.111 6.09 5.49 0.00 3.21
3876 4302 2.598394 AGCGCTGTTTGGCCATGT 60.598 55.556 10.39 0.00 0.00 3.21
3877 4303 2.126228 CAGCGCTGTTTGGCCATG 60.126 61.111 29.24 0.00 0.00 3.66
3878 4304 4.060038 GCAGCGCTGTTTGGCCAT 62.060 61.111 35.80 0.00 0.00 4.40
3879 4305 3.722355 TATAGCAGCGCTGTTTGGCCA 62.722 52.381 35.80 17.19 40.10 5.36
3880 4306 1.095228 TATAGCAGCGCTGTTTGGCC 61.095 55.000 35.80 19.55 40.10 5.36
3881 4307 0.028110 GTATAGCAGCGCTGTTTGGC 59.972 55.000 35.80 22.75 40.10 4.52
3882 4308 1.062587 GTGTATAGCAGCGCTGTTTGG 59.937 52.381 35.80 13.41 40.10 3.28
3883 4309 1.731709 TGTGTATAGCAGCGCTGTTTG 59.268 47.619 35.80 14.73 40.10 2.93
3884 4310 1.732259 GTGTGTATAGCAGCGCTGTTT 59.268 47.619 35.80 26.29 40.10 2.83
3885 4311 1.359848 GTGTGTATAGCAGCGCTGTT 58.640 50.000 35.80 32.74 40.10 3.16
3886 4312 0.802222 CGTGTGTATAGCAGCGCTGT 60.802 55.000 35.80 24.67 40.10 4.40
3887 4313 0.525455 TCGTGTGTATAGCAGCGCTG 60.525 55.000 32.83 32.83 40.10 5.18
3888 4314 0.525668 GTCGTGTGTATAGCAGCGCT 60.526 55.000 2.64 2.64 43.41 5.92
3889 4315 1.798368 CGTCGTGTGTATAGCAGCGC 61.798 60.000 0.00 0.00 0.00 5.92
3890 4316 0.247934 TCGTCGTGTGTATAGCAGCG 60.248 55.000 0.00 0.00 0.00 5.18
3891 4317 1.846782 CTTCGTCGTGTGTATAGCAGC 59.153 52.381 0.00 0.00 0.00 5.25
3892 4318 3.400505 TCTTCGTCGTGTGTATAGCAG 57.599 47.619 0.00 0.00 0.00 4.24
3893 4319 3.488553 CCATCTTCGTCGTGTGTATAGCA 60.489 47.826 0.00 0.00 0.00 3.49
3894 4320 3.043586 CCATCTTCGTCGTGTGTATAGC 58.956 50.000 0.00 0.00 0.00 2.97
3895 4321 3.550233 CCCCATCTTCGTCGTGTGTATAG 60.550 52.174 0.00 0.00 0.00 1.31
3896 4322 2.359848 CCCCATCTTCGTCGTGTGTATA 59.640 50.000 0.00 0.00 0.00 1.47
3897 4323 1.136305 CCCCATCTTCGTCGTGTGTAT 59.864 52.381 0.00 0.00 0.00 2.29
3898 4324 0.528924 CCCCATCTTCGTCGTGTGTA 59.471 55.000 0.00 0.00 0.00 2.90
3899 4325 1.292223 CCCCATCTTCGTCGTGTGT 59.708 57.895 0.00 0.00 0.00 3.72
3900 4326 2.100631 GCCCCATCTTCGTCGTGTG 61.101 63.158 0.00 0.00 0.00 3.82
3901 4327 2.264794 GCCCCATCTTCGTCGTGT 59.735 61.111 0.00 0.00 0.00 4.49
3902 4328 2.511600 GGCCCCATCTTCGTCGTG 60.512 66.667 0.00 0.00 0.00 4.35
3903 4329 4.143333 CGGCCCCATCTTCGTCGT 62.143 66.667 0.00 0.00 0.00 4.34
3904 4330 3.833645 TCGGCCCCATCTTCGTCG 61.834 66.667 0.00 0.00 0.00 5.12
3905 4331 2.202892 GTCGGCCCCATCTTCGTC 60.203 66.667 0.00 0.00 0.00 4.20
3906 4332 4.143333 CGTCGGCCCCATCTTCGT 62.143 66.667 0.00 0.00 0.00 3.85
3918 4344 1.151777 AATAATCGTGCAGGCGTCGG 61.152 55.000 0.35 0.00 0.00 4.79
3919 4345 1.189446 GTAATAATCGTGCAGGCGTCG 59.811 52.381 0.35 0.00 0.00 5.12
3920 4346 1.189446 CGTAATAATCGTGCAGGCGTC 59.811 52.381 0.35 0.00 0.00 5.19
3921 4347 1.205657 CGTAATAATCGTGCAGGCGT 58.794 50.000 0.35 0.00 0.00 5.68
3922 4348 1.205657 ACGTAATAATCGTGCAGGCG 58.794 50.000 0.35 0.00 40.07 5.52
3929 4355 3.192466 GGTGCTTCCACGTAATAATCGT 58.808 45.455 0.00 0.00 43.00 3.73
3930 4356 3.191669 TGGTGCTTCCACGTAATAATCG 58.808 45.455 0.00 0.00 43.00 3.34
3941 4367 0.606401 GCTAGCTGTTGGTGCTTCCA 60.606 55.000 7.70 0.00 45.60 3.53
3942 4368 1.639298 CGCTAGCTGTTGGTGCTTCC 61.639 60.000 13.93 0.00 41.46 3.46
3943 4369 0.951040 ACGCTAGCTGTTGGTGCTTC 60.951 55.000 13.93 0.00 41.46 3.86
3944 4370 1.071471 ACGCTAGCTGTTGGTGCTT 59.929 52.632 13.93 0.00 41.46 3.91
3945 4371 1.669115 CACGCTAGCTGTTGGTGCT 60.669 57.895 13.93 0.00 43.79 4.40
3946 4372 2.863153 CACGCTAGCTGTTGGTGC 59.137 61.111 13.93 0.00 0.00 5.01
3947 4373 1.300971 ATGCACGCTAGCTGTTGGTG 61.301 55.000 13.93 13.65 34.99 4.17
3948 4374 1.003355 ATGCACGCTAGCTGTTGGT 60.003 52.632 13.93 0.00 34.99 3.67
3949 4375 1.426621 CATGCACGCTAGCTGTTGG 59.573 57.895 13.93 0.00 34.99 3.77
3950 4376 1.226211 GCATGCACGCTAGCTGTTG 60.226 57.895 14.21 8.24 34.99 3.33
3951 4377 1.642037 CTGCATGCACGCTAGCTGTT 61.642 55.000 18.46 0.00 34.99 3.16
3952 4378 2.046988 TGCATGCACGCTAGCTGT 60.047 55.556 18.46 9.71 34.99 4.40
3953 4379 2.707646 CTGCATGCACGCTAGCTG 59.292 61.111 18.46 11.10 34.99 4.24
3954 4380 2.513204 CCTGCATGCACGCTAGCT 60.513 61.111 18.46 0.00 34.99 3.32
3955 4381 2.512286 TCCTGCATGCACGCTAGC 60.512 61.111 18.46 4.06 0.00 3.42
3956 4382 0.460811 TTCTCCTGCATGCACGCTAG 60.461 55.000 18.46 11.48 0.00 3.42
3957 4383 0.740868 GTTCTCCTGCATGCACGCTA 60.741 55.000 18.46 0.00 0.00 4.26
3958 4384 2.037136 GTTCTCCTGCATGCACGCT 61.037 57.895 18.46 0.00 0.00 5.07
3959 4385 2.249557 CTGTTCTCCTGCATGCACGC 62.250 60.000 18.46 0.00 0.00 5.34
3960 4386 0.952497 ACTGTTCTCCTGCATGCACG 60.952 55.000 18.46 13.72 0.00 5.34
3961 4387 1.068748 CAACTGTTCTCCTGCATGCAC 60.069 52.381 18.46 6.53 0.00 4.57
3962 4388 1.241165 CAACTGTTCTCCTGCATGCA 58.759 50.000 21.29 21.29 0.00 3.96
3963 4389 0.524862 CCAACTGTTCTCCTGCATGC 59.475 55.000 11.82 11.82 0.00 4.06
3964 4390 1.171308 CCCAACTGTTCTCCTGCATG 58.829 55.000 0.00 0.00 0.00 4.06
3965 4391 1.067295 TCCCAACTGTTCTCCTGCAT 58.933 50.000 0.00 0.00 0.00 3.96
3966 4392 0.843309 TTCCCAACTGTTCTCCTGCA 59.157 50.000 0.00 0.00 0.00 4.41
3967 4393 1.072331 TCTTCCCAACTGTTCTCCTGC 59.928 52.381 0.00 0.00 0.00 4.85
3968 4394 3.492102 TTCTTCCCAACTGTTCTCCTG 57.508 47.619 0.00 0.00 0.00 3.86
3969 4395 3.748989 GCTTTCTTCCCAACTGTTCTCCT 60.749 47.826 0.00 0.00 0.00 3.69
3970 4396 2.554462 GCTTTCTTCCCAACTGTTCTCC 59.446 50.000 0.00 0.00 0.00 3.71
3971 4397 3.214328 TGCTTTCTTCCCAACTGTTCTC 58.786 45.455 0.00 0.00 0.00 2.87
3972 4398 3.297134 TGCTTTCTTCCCAACTGTTCT 57.703 42.857 0.00 0.00 0.00 3.01
3973 4399 3.569701 TGATGCTTTCTTCCCAACTGTTC 59.430 43.478 0.00 0.00 0.00 3.18
3974 4400 3.565307 TGATGCTTTCTTCCCAACTGTT 58.435 40.909 0.00 0.00 0.00 3.16
3975 4401 3.228188 TGATGCTTTCTTCCCAACTGT 57.772 42.857 0.00 0.00 0.00 3.55
3976 4402 4.673580 CGAATGATGCTTTCTTCCCAACTG 60.674 45.833 0.00 0.00 0.00 3.16
3977 4403 3.441572 CGAATGATGCTTTCTTCCCAACT 59.558 43.478 0.00 0.00 0.00 3.16
3978 4404 3.762779 CGAATGATGCTTTCTTCCCAAC 58.237 45.455 0.00 0.00 0.00 3.77
3979 4405 2.164219 GCGAATGATGCTTTCTTCCCAA 59.836 45.455 0.00 0.00 0.00 4.12
3980 4406 1.745087 GCGAATGATGCTTTCTTCCCA 59.255 47.619 0.00 0.00 0.00 4.37
3981 4407 1.745087 TGCGAATGATGCTTTCTTCCC 59.255 47.619 0.00 0.00 0.00 3.97
3982 4408 2.679837 TCTGCGAATGATGCTTTCTTCC 59.320 45.455 0.00 0.00 0.00 3.46
3983 4409 4.525686 GATCTGCGAATGATGCTTTCTTC 58.474 43.478 0.00 0.00 0.00 2.87
3984 4410 3.002042 CGATCTGCGAATGATGCTTTCTT 59.998 43.478 0.00 0.00 44.57 2.52
3985 4411 2.543012 CGATCTGCGAATGATGCTTTCT 59.457 45.455 0.00 0.00 44.57 2.52
3986 4412 2.286294 ACGATCTGCGAATGATGCTTTC 59.714 45.455 0.00 0.00 44.57 2.62
3987 4413 2.031314 CACGATCTGCGAATGATGCTTT 59.969 45.455 0.00 0.00 44.57 3.51
3988 4414 1.596260 CACGATCTGCGAATGATGCTT 59.404 47.619 0.00 0.00 44.57 3.91
3989 4415 1.215244 CACGATCTGCGAATGATGCT 58.785 50.000 0.00 0.00 44.57 3.79
3990 4416 0.933097 ACACGATCTGCGAATGATGC 59.067 50.000 0.00 0.00 44.57 3.91
3991 4417 1.332640 GCACACGATCTGCGAATGATG 60.333 52.381 0.00 0.00 44.57 3.07
3992 4418 0.933097 GCACACGATCTGCGAATGAT 59.067 50.000 0.00 0.00 44.57 2.45
3993 4419 0.389687 TGCACACGATCTGCGAATGA 60.390 50.000 0.00 0.00 44.57 2.57
3994 4420 0.443478 TTGCACACGATCTGCGAATG 59.557 50.000 0.00 0.00 44.57 2.67
3995 4421 1.135972 GTTTGCACACGATCTGCGAAT 60.136 47.619 10.37 0.00 44.57 3.34
3996 4422 0.234625 GTTTGCACACGATCTGCGAA 59.765 50.000 4.41 4.41 44.57 4.70
3997 4423 0.599991 AGTTTGCACACGATCTGCGA 60.600 50.000 0.00 0.00 44.57 5.10
3999 4425 0.588252 ACAGTTTGCACACGATCTGC 59.412 50.000 0.00 0.00 32.28 4.26
4000 4426 1.866601 TGACAGTTTGCACACGATCTG 59.133 47.619 9.86 2.87 34.41 2.90
4001 4427 2.238942 TGACAGTTTGCACACGATCT 57.761 45.000 9.86 0.00 0.00 2.75
4002 4428 2.738846 AGATGACAGTTTGCACACGATC 59.261 45.455 0.00 0.29 0.00 3.69
4003 4429 2.481568 CAGATGACAGTTTGCACACGAT 59.518 45.455 0.00 0.00 0.00 3.73
4004 4430 1.866601 CAGATGACAGTTTGCACACGA 59.133 47.619 0.00 0.00 0.00 4.35
4005 4431 1.599071 ACAGATGACAGTTTGCACACG 59.401 47.619 0.00 0.00 0.00 4.49
4006 4432 2.613595 TCACAGATGACAGTTTGCACAC 59.386 45.455 0.00 0.00 0.00 3.82
4007 4433 2.916640 TCACAGATGACAGTTTGCACA 58.083 42.857 0.00 0.00 0.00 4.57
4008 4434 3.851105 GCTTCACAGATGACAGTTTGCAC 60.851 47.826 0.00 0.00 33.38 4.57
4009 4435 2.291465 GCTTCACAGATGACAGTTTGCA 59.709 45.455 0.00 0.00 33.38 4.08
4010 4436 2.291465 TGCTTCACAGATGACAGTTTGC 59.709 45.455 0.00 0.00 33.38 3.68
4011 4437 4.556942 TTGCTTCACAGATGACAGTTTG 57.443 40.909 0.00 0.00 33.38 2.93
4012 4438 5.779529 AATTGCTTCACAGATGACAGTTT 57.220 34.783 0.00 0.00 33.38 2.66
4013 4439 5.278660 GGAAATTGCTTCACAGATGACAGTT 60.279 40.000 0.00 0.00 35.55 3.16
4014 4440 4.217118 GGAAATTGCTTCACAGATGACAGT 59.783 41.667 0.00 0.00 35.55 3.55
4015 4441 4.216902 TGGAAATTGCTTCACAGATGACAG 59.783 41.667 0.00 0.00 35.55 3.51
4016 4442 4.143543 TGGAAATTGCTTCACAGATGACA 58.856 39.130 0.00 0.00 35.55 3.58
4017 4443 4.771590 TGGAAATTGCTTCACAGATGAC 57.228 40.909 0.00 0.00 35.55 3.06
4018 4444 4.158949 CCATGGAAATTGCTTCACAGATGA 59.841 41.667 5.56 0.00 35.55 2.92
4019 4445 4.430007 CCATGGAAATTGCTTCACAGATG 58.570 43.478 5.56 0.00 35.55 2.90
4020 4446 3.118884 GCCATGGAAATTGCTTCACAGAT 60.119 43.478 18.40 0.00 35.55 2.90
4021 4447 2.231964 GCCATGGAAATTGCTTCACAGA 59.768 45.455 18.40 0.00 35.55 3.41
4022 4448 2.613691 GCCATGGAAATTGCTTCACAG 58.386 47.619 18.40 0.00 35.55 3.66
4023 4449 1.275856 GGCCATGGAAATTGCTTCACA 59.724 47.619 18.40 0.00 35.55 3.58
4024 4450 1.275856 TGGCCATGGAAATTGCTTCAC 59.724 47.619 18.40 0.00 35.55 3.18
4025 4451 1.642112 TGGCCATGGAAATTGCTTCA 58.358 45.000 18.40 0.00 35.55 3.02
4026 4452 2.766345 TTGGCCATGGAAATTGCTTC 57.234 45.000 18.40 0.00 0.00 3.86
4027 4453 3.349022 CATTTGGCCATGGAAATTGCTT 58.651 40.909 18.40 0.00 0.00 3.91
4028 4454 2.356330 CCATTTGGCCATGGAAATTGCT 60.356 45.455 19.17 0.00 46.18 3.91
4029 4455 2.018515 CCATTTGGCCATGGAAATTGC 58.981 47.619 19.17 0.00 46.18 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.