Multiple sequence alignment - TraesCS7A01G072500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G072500 chr7A 100.000 2707 0 0 1 2707 38119036 38121742 0.000000e+00 5000.0
1 TraesCS7A01G072500 chr7A 95.683 139 6 0 2569 2707 83209057 83208919 9.750000e-55 224.0
2 TraesCS7A01G072500 chr7A 73.879 513 120 9 2022 2530 497281177 497281679 2.750000e-45 193.0
3 TraesCS7A01G072500 chr7A 77.959 245 50 4 1607 1851 236269059 236269299 1.680000e-32 150.0
4 TraesCS7A01G072500 chr1B 100.000 1459 0 0 400 1858 676771885 676770427 0.000000e+00 2695.0
5 TraesCS7A01G072500 chr1B 92.982 57 4 0 2098 2154 637519201 637519145 1.730000e-12 84.2
6 TraesCS7A01G072500 chr2A 99.657 1456 5 0 400 1855 607491680 607490225 0.000000e+00 2662.0
7 TraesCS7A01G072500 chr2A 89.831 59 2 4 2098 2154 754443947 754444003 3.740000e-09 73.1
8 TraesCS7A01G072500 chr4B 99.452 1459 8 0 400 1858 672924381 672925839 0.000000e+00 2651.0
9 TraesCS7A01G072500 chr5A 99.449 1453 8 0 400 1852 435709016 435710468 0.000000e+00 2639.0
10 TraesCS7A01G072500 chr3A 99.381 1454 9 0 400 1853 121401042 121402495 0.000000e+00 2636.0
11 TraesCS7A01G072500 chr3A 95.804 143 4 2 2566 2707 547451606 547451747 2.100000e-56 230.0
12 TraesCS7A01G072500 chr3A 95.745 141 4 2 2568 2707 734571313 734571174 2.710000e-55 226.0
13 TraesCS7A01G072500 chr3A 95.070 142 6 1 2567 2707 443786627 443786768 3.510000e-54 222.0
14 TraesCS7A01G072500 chr2B 98.968 1453 15 0 400 1852 168631084 168632536 0.000000e+00 2601.0
15 TraesCS7A01G072500 chr3D 97.111 1454 38 1 400 1853 33195035 33193586 0.000000e+00 2449.0
16 TraesCS7A01G072500 chr3D 83.146 89 15 0 2452 2540 300574257 300574345 6.210000e-12 82.4
17 TraesCS7A01G072500 chr3D 91.379 58 5 0 2452 2509 300576593 300576650 2.230000e-11 80.5
18 TraesCS7A01G072500 chr7D 95.939 1453 59 0 400 1852 634673582 634675034 0.000000e+00 2357.0
19 TraesCS7A01G072500 chr7D 90.526 285 22 2 2049 2329 38463839 38464122 3.290000e-99 372.0
20 TraesCS7A01G072500 chr7D 92.126 254 19 1 2325 2578 38465649 38465901 9.220000e-95 357.0
21 TraesCS7A01G072500 chr6B 99.301 1288 9 0 566 1853 195303 194016 0.000000e+00 2329.0
22 TraesCS7A01G072500 chr6B 93.836 146 8 1 2562 2707 55984726 55984582 4.540000e-53 219.0
23 TraesCS7A01G072500 chr6B 93.836 146 8 1 2562 2707 55992146 55992002 4.540000e-53 219.0
24 TraesCS7A01G072500 chr6B 77.064 218 49 1 2324 2541 444752369 444752153 1.020000e-24 124.0
25 TraesCS7A01G072500 chr4A 84.048 420 39 17 1 399 642838878 642838466 1.970000e-101 379.0
26 TraesCS7A01G072500 chr4A 95.714 140 6 0 2568 2707 440839537 440839676 2.710000e-55 226.0
27 TraesCS7A01G072500 chr4A 86.538 208 25 3 2371 2578 642832003 642831799 2.710000e-55 226.0
28 TraesCS7A01G072500 chr6A 93.960 149 6 3 2562 2707 197826593 197826445 3.510000e-54 222.0
29 TraesCS7A01G072500 chr6A 93.960 149 6 3 2561 2707 551659772 551659919 3.510000e-54 222.0
30 TraesCS7A01G072500 chr3B 97.674 86 2 0 400 485 727408093 727408178 6.040000e-32 148.0
31 TraesCS7A01G072500 chr3B 77.778 135 23 7 2091 2222 653511746 653511616 2.890000e-10 76.8
32 TraesCS7A01G072500 chr2D 93.750 48 3 0 2098 2145 59837770 59837817 3.740000e-09 73.1
33 TraesCS7A01G072500 chr5B 85.484 62 8 1 2088 2148 546692343 546692282 2.250000e-06 63.9
34 TraesCS7A01G072500 chr1A 90.476 42 4 0 2091 2132 278464755 278464796 3.770000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G072500 chr7A 38119036 38121742 2706 False 5000.0 5000 100.000 1 2707 1 chr7A.!!$F1 2706
1 TraesCS7A01G072500 chr1B 676770427 676771885 1458 True 2695.0 2695 100.000 400 1858 1 chr1B.!!$R2 1458
2 TraesCS7A01G072500 chr2A 607490225 607491680 1455 True 2662.0 2662 99.657 400 1855 1 chr2A.!!$R1 1455
3 TraesCS7A01G072500 chr4B 672924381 672925839 1458 False 2651.0 2651 99.452 400 1858 1 chr4B.!!$F1 1458
4 TraesCS7A01G072500 chr5A 435709016 435710468 1452 False 2639.0 2639 99.449 400 1852 1 chr5A.!!$F1 1452
5 TraesCS7A01G072500 chr3A 121401042 121402495 1453 False 2636.0 2636 99.381 400 1853 1 chr3A.!!$F1 1453
6 TraesCS7A01G072500 chr2B 168631084 168632536 1452 False 2601.0 2601 98.968 400 1852 1 chr2B.!!$F1 1452
7 TraesCS7A01G072500 chr3D 33193586 33195035 1449 True 2449.0 2449 97.111 400 1853 1 chr3D.!!$R1 1453
8 TraesCS7A01G072500 chr7D 634673582 634675034 1452 False 2357.0 2357 95.939 400 1852 1 chr7D.!!$F1 1452
9 TraesCS7A01G072500 chr7D 38463839 38465901 2062 False 364.5 372 91.326 2049 2578 2 chr7D.!!$F2 529
10 TraesCS7A01G072500 chr6B 194016 195303 1287 True 2329.0 2329 99.301 566 1853 1 chr6B.!!$R1 1287

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
368 369 0.037882 ACCTGCATCGGCGATGATAG 60.038 55.0 43.92 36.42 42.09 2.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2001 2002 0.03101 ATAGGAGGTTTCGGGAGCCT 60.031 55.0 0.0 0.0 34.93 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 9.956640 AATAAATTTGCCATGGAAGAATTACAA 57.043 25.926 18.40 4.35 45.84 2.41
40 41 9.956640 ATAAATTTGCCATGGAAGAATTACAAA 57.043 25.926 18.40 13.67 45.84 2.83
41 42 8.688747 AAATTTGCCATGGAAGAATTACAAAA 57.311 26.923 18.40 0.00 45.84 2.44
42 43 7.910441 ATTTGCCATGGAAGAATTACAAAAG 57.090 32.000 18.40 0.00 45.84 2.27
43 44 5.404466 TGCCATGGAAGAATTACAAAAGG 57.596 39.130 18.40 0.00 45.84 3.11
44 45 5.083122 TGCCATGGAAGAATTACAAAAGGA 58.917 37.500 18.40 0.00 45.84 3.36
45 46 5.541868 TGCCATGGAAGAATTACAAAAGGAA 59.458 36.000 18.40 0.00 45.84 3.36
46 47 6.042552 TGCCATGGAAGAATTACAAAAGGAAA 59.957 34.615 18.40 0.00 45.84 3.13
47 48 6.368791 GCCATGGAAGAATTACAAAAGGAAAC 59.631 38.462 18.40 0.00 45.84 2.78
48 49 7.441017 CCATGGAAGAATTACAAAAGGAAACA 58.559 34.615 5.56 0.00 45.84 2.83
49 50 7.599998 CCATGGAAGAATTACAAAAGGAAACAG 59.400 37.037 5.56 0.00 45.84 3.16
50 51 7.889873 TGGAAGAATTACAAAAGGAAACAGA 57.110 32.000 0.00 0.00 34.71 3.41
51 52 8.299990 TGGAAGAATTACAAAAGGAAACAGAA 57.700 30.769 0.00 0.00 34.71 3.02
52 53 8.754080 TGGAAGAATTACAAAAGGAAACAGAAA 58.246 29.630 0.00 0.00 34.71 2.52
53 54 9.249457 GGAAGAATTACAAAAGGAAACAGAAAG 57.751 33.333 0.00 0.00 0.00 2.62
60 61 7.889589 ACAAAAGGAAACAGAAAGAAAGTTG 57.110 32.000 0.00 0.00 0.00 3.16
61 62 6.368791 ACAAAAGGAAACAGAAAGAAAGTTGC 59.631 34.615 0.00 0.00 0.00 4.17
62 63 4.655762 AGGAAACAGAAAGAAAGTTGCC 57.344 40.909 0.00 0.00 40.61 4.52
63 64 4.023291 AGGAAACAGAAAGAAAGTTGCCA 58.977 39.130 4.51 0.00 42.38 4.92
64 65 4.651045 AGGAAACAGAAAGAAAGTTGCCAT 59.349 37.500 4.51 0.00 42.38 4.40
65 66 5.833131 AGGAAACAGAAAGAAAGTTGCCATA 59.167 36.000 4.51 0.00 42.38 2.74
66 67 6.494835 AGGAAACAGAAAGAAAGTTGCCATAT 59.505 34.615 4.51 0.00 42.38 1.78
67 68 7.669722 AGGAAACAGAAAGAAAGTTGCCATATA 59.330 33.333 4.51 0.00 42.38 0.86
68 69 8.470002 GGAAACAGAAAGAAAGTTGCCATATAT 58.530 33.333 0.00 0.00 40.13 0.86
69 70 9.294030 GAAACAGAAAGAAAGTTGCCATATATG 57.706 33.333 5.68 5.68 0.00 1.78
81 82 5.922960 TGCCATATATGGGAAACTAGGTT 57.077 39.130 29.02 0.00 45.79 3.50
82 83 5.876357 TGCCATATATGGGAAACTAGGTTC 58.124 41.667 29.02 12.37 45.79 3.62
83 84 5.610982 TGCCATATATGGGAAACTAGGTTCT 59.389 40.000 29.02 3.30 45.79 3.01
84 85 6.102615 TGCCATATATGGGAAACTAGGTTCTT 59.897 38.462 29.02 8.17 45.79 2.52
85 86 7.908862 TGCCATATATGGGAAACTAGGTTCTTG 60.909 40.741 29.02 6.84 45.79 3.02
86 87 6.431234 CCATATATGGGAAACTAGGTTCTTGC 59.569 42.308 22.31 3.71 44.31 4.01
87 88 3.806949 ATGGGAAACTAGGTTCTTGCA 57.193 42.857 19.70 0.00 0.00 4.08
88 89 3.806949 TGGGAAACTAGGTTCTTGCAT 57.193 42.857 19.70 0.00 0.00 3.96
89 90 4.919774 TGGGAAACTAGGTTCTTGCATA 57.080 40.909 19.70 0.00 0.00 3.14
90 91 5.450818 TGGGAAACTAGGTTCTTGCATAT 57.549 39.130 19.70 0.00 0.00 1.78
91 92 5.826643 TGGGAAACTAGGTTCTTGCATATT 58.173 37.500 19.70 0.00 0.00 1.28
92 93 6.252995 TGGGAAACTAGGTTCTTGCATATTT 58.747 36.000 19.70 0.00 0.00 1.40
93 94 6.723977 TGGGAAACTAGGTTCTTGCATATTTT 59.276 34.615 19.70 0.00 0.00 1.82
94 95 7.234577 TGGGAAACTAGGTTCTTGCATATTTTT 59.765 33.333 19.70 0.00 0.00 1.94
95 96 7.545615 GGGAAACTAGGTTCTTGCATATTTTTG 59.454 37.037 19.70 0.00 0.00 2.44
96 97 7.063426 GGAAACTAGGTTCTTGCATATTTTTGC 59.937 37.037 19.70 0.00 43.07 3.68
97 98 5.965922 ACTAGGTTCTTGCATATTTTTGCC 58.034 37.500 0.00 0.00 42.06 4.52
98 99 4.888326 AGGTTCTTGCATATTTTTGCCA 57.112 36.364 0.00 0.00 42.06 4.92
99 100 5.425196 AGGTTCTTGCATATTTTTGCCAT 57.575 34.783 0.00 0.00 42.06 4.40
100 101 5.422145 AGGTTCTTGCATATTTTTGCCATC 58.578 37.500 0.00 0.00 42.06 3.51
101 102 5.188359 AGGTTCTTGCATATTTTTGCCATCT 59.812 36.000 0.00 0.00 42.06 2.90
102 103 5.292589 GGTTCTTGCATATTTTTGCCATCTG 59.707 40.000 0.00 0.00 42.06 2.90
103 104 5.664294 TCTTGCATATTTTTGCCATCTGT 57.336 34.783 0.00 0.00 42.06 3.41
104 105 5.412640 TCTTGCATATTTTTGCCATCTGTG 58.587 37.500 0.00 0.00 42.06 3.66
105 106 5.185442 TCTTGCATATTTTTGCCATCTGTGA 59.815 36.000 0.00 0.00 42.06 3.58
106 107 5.402997 TGCATATTTTTGCCATCTGTGAA 57.597 34.783 0.00 0.00 42.06 3.18
107 108 5.791666 TGCATATTTTTGCCATCTGTGAAA 58.208 33.333 0.00 0.00 42.06 2.69
108 109 6.228995 TGCATATTTTTGCCATCTGTGAAAA 58.771 32.000 0.00 0.00 42.06 2.29
109 110 6.709397 TGCATATTTTTGCCATCTGTGAAAAA 59.291 30.769 0.00 0.00 42.06 1.94
132 133 8.768501 AAAAGAAGTTTATTTGAGGAAGGTCT 57.231 30.769 0.00 0.00 0.00 3.85
133 134 7.987750 AAGAAGTTTATTTGAGGAAGGTCTC 57.012 36.000 0.00 0.00 0.00 3.36
134 135 7.323052 AGAAGTTTATTTGAGGAAGGTCTCT 57.677 36.000 0.00 0.00 34.98 3.10
135 136 7.750655 AGAAGTTTATTTGAGGAAGGTCTCTT 58.249 34.615 0.00 0.00 34.98 2.85
136 137 8.221251 AGAAGTTTATTTGAGGAAGGTCTCTTT 58.779 33.333 0.00 0.00 34.98 2.52
137 138 7.751768 AGTTTATTTGAGGAAGGTCTCTTTG 57.248 36.000 0.00 0.00 34.98 2.77
138 139 7.518188 AGTTTATTTGAGGAAGGTCTCTTTGA 58.482 34.615 0.00 0.00 34.98 2.69
139 140 7.663493 AGTTTATTTGAGGAAGGTCTCTTTGAG 59.337 37.037 0.00 0.00 34.98 3.02
140 141 4.357918 TTTGAGGAAGGTCTCTTTGAGG 57.642 45.455 0.00 0.00 34.98 3.86
141 142 3.260269 TGAGGAAGGTCTCTTTGAGGA 57.740 47.619 0.00 0.00 34.98 3.71
142 143 3.587498 TGAGGAAGGTCTCTTTGAGGAA 58.413 45.455 0.00 0.00 34.98 3.36
143 144 3.580458 TGAGGAAGGTCTCTTTGAGGAAG 59.420 47.826 0.00 0.00 34.98 3.46
144 145 2.304470 AGGAAGGTCTCTTTGAGGAAGC 59.696 50.000 0.00 0.00 35.24 3.86
145 146 2.304470 GGAAGGTCTCTTTGAGGAAGCT 59.696 50.000 0.00 0.00 35.24 3.74
146 147 3.515901 GGAAGGTCTCTTTGAGGAAGCTA 59.484 47.826 0.00 0.00 35.24 3.32
147 148 4.163268 GGAAGGTCTCTTTGAGGAAGCTAT 59.837 45.833 0.00 0.00 35.24 2.97
148 149 5.364157 GGAAGGTCTCTTTGAGGAAGCTATA 59.636 44.000 0.00 0.00 35.24 1.31
149 150 6.462347 GGAAGGTCTCTTTGAGGAAGCTATAG 60.462 46.154 0.00 0.00 35.24 1.31
150 151 4.898861 AGGTCTCTTTGAGGAAGCTATAGG 59.101 45.833 1.04 0.00 35.24 2.57
151 152 4.502431 GGTCTCTTTGAGGAAGCTATAGGC 60.502 50.000 1.04 0.00 42.19 3.93
152 153 4.100189 GTCTCTTTGAGGAAGCTATAGGCA 59.900 45.833 1.04 0.00 44.79 4.75
153 154 4.100189 TCTCTTTGAGGAAGCTATAGGCAC 59.900 45.833 1.04 0.00 44.79 5.01
154 155 2.890808 TTGAGGAAGCTATAGGCACG 57.109 50.000 1.04 0.00 44.79 5.34
155 156 2.067365 TGAGGAAGCTATAGGCACGA 57.933 50.000 1.04 0.00 44.79 4.35
156 157 1.957177 TGAGGAAGCTATAGGCACGAG 59.043 52.381 1.04 0.00 44.79 4.18
157 158 0.676736 AGGAAGCTATAGGCACGAGC 59.323 55.000 1.04 0.00 44.79 5.03
168 169 2.020131 GCACGAGCCAGATTGATGG 58.980 57.895 0.00 0.00 43.72 3.51
169 170 1.442526 GCACGAGCCAGATTGATGGG 61.443 60.000 0.00 0.00 40.97 4.00
173 174 3.113745 GCCAGATTGATGGGCGTG 58.886 61.111 0.00 0.00 40.97 5.34
174 175 1.750399 GCCAGATTGATGGGCGTGT 60.750 57.895 0.00 0.00 40.97 4.49
175 176 0.463654 GCCAGATTGATGGGCGTGTA 60.464 55.000 0.00 0.00 40.97 2.90
176 177 1.586422 CCAGATTGATGGGCGTGTAG 58.414 55.000 0.00 0.00 36.64 2.74
177 178 1.586422 CAGATTGATGGGCGTGTAGG 58.414 55.000 0.00 0.00 0.00 3.18
178 179 1.138859 CAGATTGATGGGCGTGTAGGA 59.861 52.381 0.00 0.00 0.00 2.94
179 180 2.050144 AGATTGATGGGCGTGTAGGAT 58.950 47.619 0.00 0.00 0.00 3.24
180 181 2.439507 AGATTGATGGGCGTGTAGGATT 59.560 45.455 0.00 0.00 0.00 3.01
181 182 2.036958 TTGATGGGCGTGTAGGATTG 57.963 50.000 0.00 0.00 0.00 2.67
182 183 0.463654 TGATGGGCGTGTAGGATTGC 60.464 55.000 0.00 0.00 0.00 3.56
183 184 0.179045 GATGGGCGTGTAGGATTGCT 60.179 55.000 0.00 0.00 0.00 3.91
184 185 1.070134 GATGGGCGTGTAGGATTGCTA 59.930 52.381 0.00 0.00 0.00 3.49
185 186 0.906066 TGGGCGTGTAGGATTGCTAA 59.094 50.000 0.00 0.00 0.00 3.09
186 187 1.134521 TGGGCGTGTAGGATTGCTAAG 60.135 52.381 0.00 0.00 0.00 2.18
187 188 1.583054 GGCGTGTAGGATTGCTAAGG 58.417 55.000 0.00 0.00 0.00 2.69
188 189 1.138266 GGCGTGTAGGATTGCTAAGGA 59.862 52.381 0.00 0.00 0.00 3.36
189 190 2.419574 GGCGTGTAGGATTGCTAAGGAA 60.420 50.000 0.00 0.00 0.00 3.36
190 191 3.267483 GCGTGTAGGATTGCTAAGGAAA 58.733 45.455 0.00 0.00 0.00 3.13
191 192 3.309954 GCGTGTAGGATTGCTAAGGAAAG 59.690 47.826 0.00 0.00 0.00 2.62
192 193 3.309954 CGTGTAGGATTGCTAAGGAAAGC 59.690 47.826 0.00 0.00 43.08 3.51
193 194 3.309954 GTGTAGGATTGCTAAGGAAAGCG 59.690 47.826 0.00 0.00 45.85 4.68
194 195 2.789409 AGGATTGCTAAGGAAAGCGT 57.211 45.000 0.00 0.00 45.85 5.07
195 196 3.073274 AGGATTGCTAAGGAAAGCGTT 57.927 42.857 0.00 0.00 45.85 4.84
196 197 3.010420 AGGATTGCTAAGGAAAGCGTTC 58.990 45.455 3.53 3.53 45.85 3.95
197 198 2.223044 GGATTGCTAAGGAAAGCGTTCG 60.223 50.000 6.29 0.00 45.85 3.95
198 199 0.515564 TTGCTAAGGAAAGCGTTCGC 59.484 50.000 9.24 9.24 45.85 4.70
199 200 1.058903 GCTAAGGAAAGCGTTCGCG 59.941 57.895 11.40 0.00 44.73 5.87
212 213 3.363788 CGTTCGCGCTAGTTTTATGTT 57.636 42.857 5.56 0.00 0.00 2.71
213 214 3.081445 CGTTCGCGCTAGTTTTATGTTG 58.919 45.455 5.56 0.00 0.00 3.33
214 215 3.422603 CGTTCGCGCTAGTTTTATGTTGT 60.423 43.478 5.56 0.00 0.00 3.32
215 216 4.460505 GTTCGCGCTAGTTTTATGTTGTT 58.539 39.130 5.56 0.00 0.00 2.83
216 217 4.060288 TCGCGCTAGTTTTATGTTGTTG 57.940 40.909 5.56 0.00 0.00 3.33
217 218 3.495377 TCGCGCTAGTTTTATGTTGTTGT 59.505 39.130 5.56 0.00 0.00 3.32
218 219 3.597825 CGCGCTAGTTTTATGTTGTTGTG 59.402 43.478 5.56 0.00 0.00 3.33
219 220 4.609559 CGCGCTAGTTTTATGTTGTTGTGA 60.610 41.667 5.56 0.00 0.00 3.58
220 221 5.209240 GCGCTAGTTTTATGTTGTTGTGAA 58.791 37.500 0.00 0.00 0.00 3.18
221 222 5.115021 GCGCTAGTTTTATGTTGTTGTGAAC 59.885 40.000 0.00 0.00 0.00 3.18
222 223 5.335949 CGCTAGTTTTATGTTGTTGTGAACG 59.664 40.000 0.00 0.00 0.00 3.95
223 224 6.423862 GCTAGTTTTATGTTGTTGTGAACGA 58.576 36.000 0.00 0.00 0.00 3.85
224 225 6.908284 GCTAGTTTTATGTTGTTGTGAACGAA 59.092 34.615 0.00 0.00 0.00 3.85
225 226 7.589954 GCTAGTTTTATGTTGTTGTGAACGAAT 59.410 33.333 0.00 0.00 0.00 3.34
228 229 9.790389 AGTTTTATGTTGTTGTGAACGAATAAA 57.210 25.926 0.00 0.00 0.00 1.40
232 233 9.569167 TTATGTTGTTGTGAACGAATAAAAACA 57.431 25.926 0.00 0.00 0.00 2.83
233 234 7.869016 TGTTGTTGTGAACGAATAAAAACAA 57.131 28.000 0.00 0.00 34.62 2.83
234 235 8.467402 TGTTGTTGTGAACGAATAAAAACAAT 57.533 26.923 0.00 0.00 38.06 2.71
235 236 8.376203 TGTTGTTGTGAACGAATAAAAACAATG 58.624 29.630 0.00 0.00 38.06 2.82
236 237 8.587950 GTTGTTGTGAACGAATAAAAACAATGA 58.412 29.630 0.00 0.00 38.06 2.57
237 238 8.109843 TGTTGTGAACGAATAAAAACAATGAC 57.890 30.769 0.00 0.00 30.96 3.06
238 239 7.755373 TGTTGTGAACGAATAAAAACAATGACA 59.245 29.630 0.00 0.00 30.96 3.58
239 240 7.672351 TGTGAACGAATAAAAACAATGACAC 57.328 32.000 0.00 0.00 0.00 3.67
240 241 6.412362 TGTGAACGAATAAAAACAATGACACG 59.588 34.615 0.00 0.00 0.00 4.49
241 242 5.910166 TGAACGAATAAAAACAATGACACGG 59.090 36.000 0.00 0.00 0.00 4.94
242 243 4.223659 ACGAATAAAAACAATGACACGGC 58.776 39.130 0.00 0.00 0.00 5.68
243 244 3.606346 CGAATAAAAACAATGACACGGCC 59.394 43.478 0.00 0.00 0.00 6.13
244 245 4.614993 CGAATAAAAACAATGACACGGCCT 60.615 41.667 0.00 0.00 0.00 5.19
245 246 2.793278 AAAAACAATGACACGGCCTC 57.207 45.000 0.00 0.00 0.00 4.70
246 247 1.981256 AAAACAATGACACGGCCTCT 58.019 45.000 0.00 0.00 0.00 3.69
247 248 1.238439 AAACAATGACACGGCCTCTG 58.762 50.000 0.00 0.00 0.00 3.35
248 249 1.237285 AACAATGACACGGCCTCTGC 61.237 55.000 0.00 0.00 0.00 4.26
249 250 1.376424 CAATGACACGGCCTCTGCT 60.376 57.895 0.00 0.00 37.74 4.24
250 251 1.078848 AATGACACGGCCTCTGCTC 60.079 57.895 0.00 0.00 37.74 4.26
251 252 2.527951 AATGACACGGCCTCTGCTCC 62.528 60.000 0.00 0.00 37.74 4.70
259 260 2.363018 CCTCTGCTCCGAGGTCCA 60.363 66.667 8.54 0.00 44.49 4.02
260 261 1.760086 CCTCTGCTCCGAGGTCCAT 60.760 63.158 8.54 0.00 44.49 3.41
261 262 1.440893 CTCTGCTCCGAGGTCCATG 59.559 63.158 0.00 0.00 0.00 3.66
262 263 2.202987 CTGCTCCGAGGTCCATGC 60.203 66.667 0.00 0.00 0.00 4.06
263 264 3.002583 TGCTCCGAGGTCCATGCA 61.003 61.111 0.00 0.00 0.00 3.96
264 265 2.321263 CTGCTCCGAGGTCCATGCAT 62.321 60.000 0.00 0.00 0.00 3.96
265 266 1.048160 TGCTCCGAGGTCCATGCATA 61.048 55.000 0.00 0.00 0.00 3.14
266 267 0.320247 GCTCCGAGGTCCATGCATAG 60.320 60.000 0.00 0.00 0.00 2.23
267 268 0.319728 CTCCGAGGTCCATGCATAGG 59.680 60.000 0.00 3.69 0.00 2.57
268 269 0.105709 TCCGAGGTCCATGCATAGGA 60.106 55.000 12.22 12.22 0.00 2.94
269 270 0.758734 CCGAGGTCCATGCATAGGAA 59.241 55.000 16.37 2.70 36.80 3.36
270 271 1.270518 CCGAGGTCCATGCATAGGAAG 60.271 57.143 16.37 10.02 36.80 3.46
271 272 1.414181 CGAGGTCCATGCATAGGAAGT 59.586 52.381 16.37 8.95 36.80 3.01
272 273 2.158900 CGAGGTCCATGCATAGGAAGTT 60.159 50.000 16.37 7.76 36.80 2.66
273 274 3.471680 GAGGTCCATGCATAGGAAGTTC 58.528 50.000 16.37 11.58 36.80 3.01
274 275 2.173569 AGGTCCATGCATAGGAAGTTCC 59.826 50.000 14.54 14.54 36.80 3.62
298 299 5.394224 GCTAGGGAGCGATAAATCTAACT 57.606 43.478 0.00 0.00 39.39 2.24
299 300 5.785243 GCTAGGGAGCGATAAATCTAACTT 58.215 41.667 0.00 0.00 39.39 2.66
300 301 5.865013 GCTAGGGAGCGATAAATCTAACTTC 59.135 44.000 0.00 0.00 39.39 3.01
301 302 5.871396 AGGGAGCGATAAATCTAACTTCA 57.129 39.130 0.00 0.00 0.00 3.02
302 303 5.848406 AGGGAGCGATAAATCTAACTTCAG 58.152 41.667 0.00 0.00 0.00 3.02
303 304 5.598830 AGGGAGCGATAAATCTAACTTCAGA 59.401 40.000 0.00 0.00 0.00 3.27
304 305 6.268847 AGGGAGCGATAAATCTAACTTCAGAT 59.731 38.462 0.00 0.00 36.83 2.90
305 306 7.451877 AGGGAGCGATAAATCTAACTTCAGATA 59.548 37.037 0.00 0.00 34.08 1.98
306 307 8.254508 GGGAGCGATAAATCTAACTTCAGATAT 58.745 37.037 0.00 0.00 34.08 1.63
307 308 9.646427 GGAGCGATAAATCTAACTTCAGATATT 57.354 33.333 0.00 0.00 34.08 1.28
345 346 7.553881 TTTTTCTTGATCTGACTCTTTTCGT 57.446 32.000 0.00 0.00 0.00 3.85
346 347 6.530913 TTTCTTGATCTGACTCTTTTCGTG 57.469 37.500 0.00 0.00 0.00 4.35
347 348 5.201713 TCTTGATCTGACTCTTTTCGTGT 57.798 39.130 0.00 0.00 0.00 4.49
348 349 5.223382 TCTTGATCTGACTCTTTTCGTGTC 58.777 41.667 0.00 0.00 36.82 3.67
349 350 4.584327 TGATCTGACTCTTTTCGTGTCA 57.416 40.909 0.00 0.00 42.14 3.58
350 351 4.299155 TGATCTGACTCTTTTCGTGTCAC 58.701 43.478 0.00 0.00 40.21 3.67
351 352 3.093717 TCTGACTCTTTTCGTGTCACC 57.906 47.619 0.00 0.00 40.21 4.02
352 353 2.693591 TCTGACTCTTTTCGTGTCACCT 59.306 45.455 0.00 0.00 40.21 4.00
353 354 2.797156 CTGACTCTTTTCGTGTCACCTG 59.203 50.000 0.00 0.00 40.21 4.00
354 355 1.527311 GACTCTTTTCGTGTCACCTGC 59.473 52.381 0.00 0.00 36.42 4.85
355 356 1.134521 ACTCTTTTCGTGTCACCTGCA 60.135 47.619 0.00 0.00 0.00 4.41
356 357 2.146342 CTCTTTTCGTGTCACCTGCAT 58.854 47.619 0.00 0.00 0.00 3.96
357 358 2.143122 TCTTTTCGTGTCACCTGCATC 58.857 47.619 0.00 0.00 0.00 3.91
358 359 0.865111 TTTTCGTGTCACCTGCATCG 59.135 50.000 0.00 0.00 0.00 3.84
359 360 0.948623 TTTCGTGTCACCTGCATCGG 60.949 55.000 0.00 0.00 0.00 4.18
360 361 3.490759 CGTGTCACCTGCATCGGC 61.491 66.667 0.00 0.00 41.68 5.54
361 362 3.490759 GTGTCACCTGCATCGGCG 61.491 66.667 0.00 0.00 45.35 6.46
362 363 3.690280 TGTCACCTGCATCGGCGA 61.690 61.111 13.87 13.87 45.35 5.54
363 364 2.202932 GTCACCTGCATCGGCGAT 60.203 61.111 18.14 18.14 45.35 4.58
364 365 2.202919 TCACCTGCATCGGCGATG 60.203 61.111 38.01 38.01 45.35 3.84
365 366 2.202919 CACCTGCATCGGCGATGA 60.203 61.111 43.92 29.43 42.09 2.92
366 367 1.596203 CACCTGCATCGGCGATGAT 60.596 57.895 43.92 26.38 42.09 2.45
367 368 0.319813 CACCTGCATCGGCGATGATA 60.320 55.000 43.92 31.51 42.09 2.15
368 369 0.037882 ACCTGCATCGGCGATGATAG 60.038 55.000 43.92 36.42 42.09 2.08
369 370 0.738762 CCTGCATCGGCGATGATAGG 60.739 60.000 43.92 39.59 42.09 2.57
370 371 0.738762 CTGCATCGGCGATGATAGGG 60.739 60.000 43.92 26.05 42.09 3.53
371 372 1.293498 GCATCGGCGATGATAGGGT 59.707 57.895 43.92 11.94 42.09 4.34
372 373 0.320771 GCATCGGCGATGATAGGGTT 60.321 55.000 43.92 11.15 42.09 4.11
373 374 1.432514 CATCGGCGATGATAGGGTTG 58.567 55.000 39.06 15.09 42.09 3.77
374 375 1.048601 ATCGGCGATGATAGGGTTGT 58.951 50.000 23.36 0.00 0.00 3.32
375 376 1.694844 TCGGCGATGATAGGGTTGTA 58.305 50.000 4.99 0.00 0.00 2.41
376 377 2.244695 TCGGCGATGATAGGGTTGTAT 58.755 47.619 4.99 0.00 0.00 2.29
377 378 2.029380 TCGGCGATGATAGGGTTGTATG 60.029 50.000 4.99 0.00 0.00 2.39
378 379 2.076863 GGCGATGATAGGGTTGTATGC 58.923 52.381 0.00 0.00 0.00 3.14
379 380 1.726791 GCGATGATAGGGTTGTATGCG 59.273 52.381 0.00 0.00 0.00 4.73
380 381 2.866460 GCGATGATAGGGTTGTATGCGT 60.866 50.000 0.00 0.00 0.00 5.24
381 382 3.390135 CGATGATAGGGTTGTATGCGTT 58.610 45.455 0.00 0.00 0.00 4.84
382 383 4.552355 CGATGATAGGGTTGTATGCGTTA 58.448 43.478 0.00 0.00 0.00 3.18
383 384 4.621460 CGATGATAGGGTTGTATGCGTTAG 59.379 45.833 0.00 0.00 0.00 2.34
384 385 3.724374 TGATAGGGTTGTATGCGTTAGC 58.276 45.455 0.00 0.00 45.41 3.09
1879 1880 1.578583 CCGTAGGCGATAACCCTTTG 58.421 55.000 0.00 0.00 46.14 2.77
1880 1881 1.134610 CCGTAGGCGATAACCCTTTGT 60.135 52.381 0.00 0.00 46.14 2.83
1881 1882 2.101249 CCGTAGGCGATAACCCTTTGTA 59.899 50.000 0.00 0.00 46.14 2.41
1882 1883 3.118542 CGTAGGCGATAACCCTTTGTAC 58.881 50.000 0.00 0.00 41.33 2.90
1883 1884 2.704464 AGGCGATAACCCTTTGTACC 57.296 50.000 0.00 0.00 0.00 3.34
1884 1885 2.193993 AGGCGATAACCCTTTGTACCT 58.806 47.619 0.00 0.00 0.00 3.08
1885 1886 2.574824 AGGCGATAACCCTTTGTACCTT 59.425 45.455 0.00 0.00 0.00 3.50
1886 1887 3.776417 AGGCGATAACCCTTTGTACCTTA 59.224 43.478 0.00 0.00 0.00 2.69
1887 1888 4.225717 AGGCGATAACCCTTTGTACCTTAA 59.774 41.667 0.00 0.00 0.00 1.85
1888 1889 5.104235 AGGCGATAACCCTTTGTACCTTAAT 60.104 40.000 0.00 0.00 0.00 1.40
1889 1890 5.008316 GGCGATAACCCTTTGTACCTTAATG 59.992 44.000 0.00 0.00 0.00 1.90
1890 1891 5.505159 GCGATAACCCTTTGTACCTTAATGC 60.505 44.000 0.00 0.00 0.00 3.56
1891 1892 5.008316 CGATAACCCTTTGTACCTTAATGCC 59.992 44.000 0.00 0.00 0.00 4.40
1892 1893 3.818295 ACCCTTTGTACCTTAATGCCA 57.182 42.857 0.00 0.00 0.00 4.92
1893 1894 3.697166 ACCCTTTGTACCTTAATGCCAG 58.303 45.455 0.00 0.00 0.00 4.85
1894 1895 3.023832 CCCTTTGTACCTTAATGCCAGG 58.976 50.000 0.00 0.00 37.45 4.45
1895 1896 3.563479 CCCTTTGTACCTTAATGCCAGGT 60.563 47.826 0.00 0.00 46.95 4.00
1896 1897 3.443681 CCTTTGTACCTTAATGCCAGGTG 59.556 47.826 1.67 0.00 44.89 4.00
1897 1898 2.122783 TGTACCTTAATGCCAGGTGC 57.877 50.000 1.67 1.11 44.89 5.01
1898 1899 1.633432 TGTACCTTAATGCCAGGTGCT 59.367 47.619 8.42 0.00 44.94 4.40
1899 1900 2.041081 TGTACCTTAATGCCAGGTGCTT 59.959 45.455 8.42 0.00 44.94 3.91
1900 1901 2.309136 ACCTTAATGCCAGGTGCTTT 57.691 45.000 0.00 0.00 43.52 3.51
1901 1902 3.449746 ACCTTAATGCCAGGTGCTTTA 57.550 42.857 0.00 0.00 43.52 1.85
1902 1903 3.773560 ACCTTAATGCCAGGTGCTTTAA 58.226 40.909 0.00 0.00 43.52 1.52
1903 1904 4.352893 ACCTTAATGCCAGGTGCTTTAAT 58.647 39.130 5.93 0.00 43.52 1.40
1904 1905 4.777366 ACCTTAATGCCAGGTGCTTTAATT 59.223 37.500 5.93 0.00 43.52 1.40
1905 1906 5.105351 ACCTTAATGCCAGGTGCTTTAATTC 60.105 40.000 5.93 0.00 43.52 2.17
1906 1907 5.105392 CCTTAATGCCAGGTGCTTTAATTCA 60.105 40.000 5.93 0.00 44.08 2.57
1907 1908 4.460948 AATGCCAGGTGCTTTAATTCAG 57.539 40.909 0.00 0.00 42.00 3.02
1908 1909 1.545582 TGCCAGGTGCTTTAATTCAGC 59.454 47.619 3.09 3.09 42.00 4.26
1909 1910 1.468054 GCCAGGTGCTTTAATTCAGCG 60.468 52.381 5.35 0.00 40.45 5.18
1910 1911 1.812571 CCAGGTGCTTTAATTCAGCGT 59.187 47.619 5.35 0.00 40.45 5.07
1911 1912 2.228822 CCAGGTGCTTTAATTCAGCGTT 59.771 45.455 5.35 0.00 40.45 4.84
1912 1913 3.438781 CCAGGTGCTTTAATTCAGCGTTA 59.561 43.478 5.35 0.00 40.45 3.18
1913 1914 4.096382 CCAGGTGCTTTAATTCAGCGTTAT 59.904 41.667 5.35 0.00 40.45 1.89
1914 1915 5.030295 CAGGTGCTTTAATTCAGCGTTATG 58.970 41.667 5.35 0.00 40.45 1.90
1915 1916 3.791353 GGTGCTTTAATTCAGCGTTATGC 59.209 43.478 5.35 0.00 46.98 3.14
1924 1925 3.827634 GCGTTATGCCCCTCAAGG 58.172 61.111 0.00 0.00 37.76 3.61
1937 1938 2.446435 CCTCAAGGGTTTGTATGTGGG 58.554 52.381 0.00 0.00 35.73 4.61
1938 1939 2.225017 CCTCAAGGGTTTGTATGTGGGT 60.225 50.000 0.00 0.00 35.73 4.51
1939 1940 2.819608 CTCAAGGGTTTGTATGTGGGTG 59.180 50.000 0.00 0.00 35.73 4.61
1940 1941 1.892474 CAAGGGTTTGTATGTGGGTGG 59.108 52.381 0.00 0.00 0.00 4.61
1941 1942 0.407918 AGGGTTTGTATGTGGGTGGG 59.592 55.000 0.00 0.00 0.00 4.61
1942 1943 1.254975 GGGTTTGTATGTGGGTGGGC 61.255 60.000 0.00 0.00 0.00 5.36
1943 1944 0.251608 GGTTTGTATGTGGGTGGGCT 60.252 55.000 0.00 0.00 0.00 5.19
1944 1945 1.627864 GTTTGTATGTGGGTGGGCTT 58.372 50.000 0.00 0.00 0.00 4.35
1945 1946 1.272212 GTTTGTATGTGGGTGGGCTTG 59.728 52.381 0.00 0.00 0.00 4.01
1946 1947 0.251564 TTGTATGTGGGTGGGCTTGG 60.252 55.000 0.00 0.00 0.00 3.61
1947 1948 1.379843 GTATGTGGGTGGGCTTGGG 60.380 63.158 0.00 0.00 0.00 4.12
1948 1949 1.854979 TATGTGGGTGGGCTTGGGT 60.855 57.895 0.00 0.00 0.00 4.51
1949 1950 2.148723 TATGTGGGTGGGCTTGGGTG 62.149 60.000 0.00 0.00 0.00 4.61
1950 1951 4.994756 GTGGGTGGGCTTGGGTGG 62.995 72.222 0.00 0.00 0.00 4.61
1952 1953 4.678743 GGGTGGGCTTGGGTGGAC 62.679 72.222 0.00 0.00 0.00 4.02
1953 1954 4.678743 GGTGGGCTTGGGTGGACC 62.679 72.222 0.00 0.00 40.81 4.46
1965 1966 2.604152 TGGACCAACCAACCACCC 59.396 61.111 0.00 0.00 46.75 4.61
1966 1967 2.317378 TGGACCAACCAACCACCCA 61.317 57.895 0.00 0.00 46.75 4.51
1967 1968 1.830847 GGACCAACCAACCACCCAC 60.831 63.158 0.00 0.00 38.79 4.61
1968 1969 1.830847 GACCAACCAACCACCCACC 60.831 63.158 0.00 0.00 0.00 4.61
1969 1970 2.523168 CCAACCAACCACCCACCC 60.523 66.667 0.00 0.00 0.00 4.61
1970 1971 2.280416 CAACCAACCACCCACCCA 59.720 61.111 0.00 0.00 0.00 4.51
1971 1972 1.152355 CAACCAACCACCCACCCAT 60.152 57.895 0.00 0.00 0.00 4.00
1972 1973 0.762461 CAACCAACCACCCACCCATT 60.762 55.000 0.00 0.00 0.00 3.16
1973 1974 0.471022 AACCAACCACCCACCCATTC 60.471 55.000 0.00 0.00 0.00 2.67
1974 1975 1.154921 CCAACCACCCACCCATTCA 59.845 57.895 0.00 0.00 0.00 2.57
1975 1976 1.184970 CCAACCACCCACCCATTCAC 61.185 60.000 0.00 0.00 0.00 3.18
1976 1977 1.155155 AACCACCCACCCATTCACC 59.845 57.895 0.00 0.00 0.00 4.02
1977 1978 2.037208 CCACCCACCCATTCACCC 59.963 66.667 0.00 0.00 0.00 4.61
1978 1979 2.037208 CACCCACCCATTCACCCC 59.963 66.667 0.00 0.00 0.00 4.95
1979 1980 3.272847 ACCCACCCATTCACCCCC 61.273 66.667 0.00 0.00 0.00 5.40
1980 1981 2.946650 CCCACCCATTCACCCCCT 60.947 66.667 0.00 0.00 0.00 4.79
1981 1982 2.557181 CCCACCCATTCACCCCCTT 61.557 63.158 0.00 0.00 0.00 3.95
1982 1983 1.000359 CCACCCATTCACCCCCTTC 60.000 63.158 0.00 0.00 0.00 3.46
1983 1984 1.000359 CACCCATTCACCCCCTTCC 60.000 63.158 0.00 0.00 0.00 3.46
1984 1985 1.151361 ACCCATTCACCCCCTTCCT 60.151 57.895 0.00 0.00 0.00 3.36
1985 1986 0.122435 ACCCATTCACCCCCTTCCTA 59.878 55.000 0.00 0.00 0.00 2.94
1986 1987 0.551396 CCCATTCACCCCCTTCCTAC 59.449 60.000 0.00 0.00 0.00 3.18
1987 1988 0.180406 CCATTCACCCCCTTCCTACG 59.820 60.000 0.00 0.00 0.00 3.51
1988 1989 1.200519 CATTCACCCCCTTCCTACGA 58.799 55.000 0.00 0.00 0.00 3.43
1989 1990 1.139058 CATTCACCCCCTTCCTACGAG 59.861 57.143 0.00 0.00 0.00 4.18
1990 1991 1.262640 TTCACCCCCTTCCTACGAGC 61.263 60.000 0.00 0.00 0.00 5.03
1991 1992 1.987855 CACCCCCTTCCTACGAGCA 60.988 63.158 0.00 0.00 0.00 4.26
1992 1993 1.003051 ACCCCCTTCCTACGAGCAT 59.997 57.895 0.00 0.00 0.00 3.79
1993 1994 1.049289 ACCCCCTTCCTACGAGCATC 61.049 60.000 0.00 0.00 0.00 3.91
1994 1995 0.760945 CCCCCTTCCTACGAGCATCT 60.761 60.000 0.00 0.00 0.00 2.90
1995 1996 1.480683 CCCCCTTCCTACGAGCATCTA 60.481 57.143 0.00 0.00 0.00 1.98
1996 1997 2.530701 CCCCTTCCTACGAGCATCTAT 58.469 52.381 0.00 0.00 0.00 1.98
1997 1998 3.563697 CCCCCTTCCTACGAGCATCTATA 60.564 52.174 0.00 0.00 0.00 1.31
1998 1999 3.697045 CCCCTTCCTACGAGCATCTATAG 59.303 52.174 0.00 0.00 0.00 1.31
1999 2000 3.129638 CCCTTCCTACGAGCATCTATAGC 59.870 52.174 0.00 0.00 0.00 2.97
2000 2001 3.129638 CCTTCCTACGAGCATCTATAGCC 59.870 52.174 0.00 0.00 0.00 3.93
2001 2002 3.434940 TCCTACGAGCATCTATAGCCA 57.565 47.619 0.00 0.00 0.00 4.75
2002 2003 3.348119 TCCTACGAGCATCTATAGCCAG 58.652 50.000 0.00 0.00 0.00 4.85
2003 2004 2.425312 CCTACGAGCATCTATAGCCAGG 59.575 54.545 0.00 0.00 0.00 4.45
2004 2005 0.605589 ACGAGCATCTATAGCCAGGC 59.394 55.000 1.84 1.84 0.00 4.85
2005 2006 0.894141 CGAGCATCTATAGCCAGGCT 59.106 55.000 20.63 20.63 43.41 4.58
2006 2007 1.135141 CGAGCATCTATAGCCAGGCTC 60.135 57.143 20.38 14.78 43.13 4.70
2007 2008 1.206849 GAGCATCTATAGCCAGGCTCC 59.793 57.143 20.38 0.00 41.31 4.70
2008 2009 0.251634 GCATCTATAGCCAGGCTCCC 59.748 60.000 20.38 0.00 40.44 4.30
2009 2010 0.534412 CATCTATAGCCAGGCTCCCG 59.466 60.000 20.38 7.37 40.44 5.14
2010 2011 0.409876 ATCTATAGCCAGGCTCCCGA 59.590 55.000 20.38 13.00 40.44 5.14
2011 2012 0.187606 TCTATAGCCAGGCTCCCGAA 59.812 55.000 20.38 0.00 40.44 4.30
2012 2013 1.048601 CTATAGCCAGGCTCCCGAAA 58.951 55.000 20.38 0.00 40.44 3.46
2013 2014 0.756903 TATAGCCAGGCTCCCGAAAC 59.243 55.000 20.38 0.00 40.44 2.78
2014 2015 1.984288 ATAGCCAGGCTCCCGAAACC 61.984 60.000 20.38 0.00 40.44 3.27
2015 2016 4.035102 GCCAGGCTCCCGAAACCT 62.035 66.667 3.29 0.00 0.00 3.50
2016 2017 2.269241 CCAGGCTCCCGAAACCTC 59.731 66.667 0.00 0.00 0.00 3.85
2017 2018 2.269241 CAGGCTCCCGAAACCTCC 59.731 66.667 0.00 0.00 0.00 4.30
2018 2019 2.122954 AGGCTCCCGAAACCTCCT 59.877 61.111 0.00 0.00 0.00 3.69
2019 2020 0.976073 CAGGCTCCCGAAACCTCCTA 60.976 60.000 0.00 0.00 0.00 2.94
2020 2021 0.031010 AGGCTCCCGAAACCTCCTAT 60.031 55.000 0.00 0.00 0.00 2.57
2021 2022 1.219724 AGGCTCCCGAAACCTCCTATA 59.780 52.381 0.00 0.00 0.00 1.31
2022 2023 1.343789 GGCTCCCGAAACCTCCTATAC 59.656 57.143 0.00 0.00 0.00 1.47
2023 2024 1.343789 GCTCCCGAAACCTCCTATACC 59.656 57.143 0.00 0.00 0.00 2.73
2024 2025 1.969208 CTCCCGAAACCTCCTATACCC 59.031 57.143 0.00 0.00 0.00 3.69
2025 2026 1.577242 TCCCGAAACCTCCTATACCCT 59.423 52.381 0.00 0.00 0.00 4.34
2026 2027 2.022722 TCCCGAAACCTCCTATACCCTT 60.023 50.000 0.00 0.00 0.00 3.95
2027 2028 2.104281 CCCGAAACCTCCTATACCCTTG 59.896 54.545 0.00 0.00 0.00 3.61
2028 2029 2.104281 CCGAAACCTCCTATACCCTTGG 59.896 54.545 0.00 0.00 0.00 3.61
2029 2030 3.036091 CGAAACCTCCTATACCCTTGGA 58.964 50.000 0.00 0.00 0.00 3.53
2030 2031 3.181468 CGAAACCTCCTATACCCTTGGAC 60.181 52.174 0.00 0.00 0.00 4.02
2031 2032 3.502051 AACCTCCTATACCCTTGGACA 57.498 47.619 0.00 0.00 0.00 4.02
2032 2033 3.047695 ACCTCCTATACCCTTGGACAG 57.952 52.381 0.00 0.00 0.00 3.51
2033 2034 2.590611 ACCTCCTATACCCTTGGACAGA 59.409 50.000 0.00 0.00 0.00 3.41
2034 2035 3.210074 ACCTCCTATACCCTTGGACAGAT 59.790 47.826 0.00 0.00 0.00 2.90
2035 2036 3.580458 CCTCCTATACCCTTGGACAGATG 59.420 52.174 0.00 0.00 0.00 2.90
2036 2037 3.580458 CTCCTATACCCTTGGACAGATGG 59.420 52.174 0.00 0.00 0.00 3.51
2037 2038 2.039084 CCTATACCCTTGGACAGATGGC 59.961 54.545 0.00 0.00 0.00 4.40
2038 2039 0.846693 ATACCCTTGGACAGATGGCC 59.153 55.000 0.00 0.00 45.93 5.36
2039 2040 0.253160 TACCCTTGGACAGATGGCCT 60.253 55.000 3.32 0.00 45.91 5.19
2040 2041 1.077212 CCCTTGGACAGATGGCCTG 60.077 63.158 3.32 0.00 45.91 4.85
2041 2042 1.077212 CCTTGGACAGATGGCCTGG 60.077 63.158 3.32 4.68 45.91 4.45
2042 2043 1.687612 CTTGGACAGATGGCCTGGT 59.312 57.895 3.32 0.00 45.91 4.00
2043 2044 0.393537 CTTGGACAGATGGCCTGGTC 60.394 60.000 3.32 6.21 45.91 4.02
2044 2045 1.133181 TTGGACAGATGGCCTGGTCA 61.133 55.000 2.19 2.19 45.91 4.02
2045 2046 0.915872 TGGACAGATGGCCTGGTCAT 60.916 55.000 14.79 14.79 45.91 3.06
2046 2047 2.465914 TGGACAGATGGCCTGGTCATT 61.466 52.381 16.08 0.00 45.91 2.57
2047 2048 4.598852 TGGACAGATGGCCTGGTCATTG 62.599 54.545 16.08 16.40 45.91 2.82
2072 2077 4.514816 CCGGTAAAGAAAAACCCTAAACGA 59.485 41.667 0.00 0.00 31.68 3.85
2074 2079 6.294120 CCGGTAAAGAAAAACCCTAAACGAAT 60.294 38.462 0.00 0.00 31.68 3.34
2089 2094 2.111384 ACGAATGCCTCATACACTCCT 58.889 47.619 0.00 0.00 0.00 3.69
2093 2098 5.163301 ACGAATGCCTCATACACTCCTAAAT 60.163 40.000 0.00 0.00 0.00 1.40
2095 2100 5.894298 ATGCCTCATACACTCCTAAATGA 57.106 39.130 0.00 0.00 0.00 2.57
2096 2101 5.894298 TGCCTCATACACTCCTAAATGAT 57.106 39.130 0.00 0.00 0.00 2.45
2156 2161 2.930562 GGATATGGGGAGGCCGCT 60.931 66.667 6.40 0.00 37.37 5.52
2189 2194 1.887707 GTTCGCCACGATGGATCCC 60.888 63.158 9.90 0.00 40.96 3.85
2225 2230 4.112634 CACCAAGACACCACATATACTCG 58.887 47.826 0.00 0.00 0.00 4.18
2235 2240 4.099573 ACCACATATACTCGTTCCCTTCTG 59.900 45.833 0.00 0.00 0.00 3.02
2247 2252 0.914417 CCCTTCTGCTCCCCTAACCA 60.914 60.000 0.00 0.00 0.00 3.67
2256 2261 2.944542 GCTCCCCTAACCAAAACCTAGC 60.945 54.545 0.00 0.00 0.00 3.42
2258 2263 1.680860 CCCCTAACCAAAACCTAGCCG 60.681 57.143 0.00 0.00 0.00 5.52
2259 2264 1.092348 CCTAACCAAAACCTAGCCGC 58.908 55.000 0.00 0.00 0.00 6.53
2269 2274 2.510238 CTAGCCGCTGCACTCCAC 60.510 66.667 2.16 0.00 41.13 4.02
2304 2309 0.824759 GGTGCCTACCAACGATCTCT 59.175 55.000 0.00 0.00 46.71 3.10
2316 2321 2.808919 ACGATCTCTGACCTTCTCCAA 58.191 47.619 0.00 0.00 0.00 3.53
2327 3863 0.178992 CTTCTCCAACAAGGTGGGCA 60.179 55.000 3.98 0.00 39.34 5.36
2335 3871 3.011517 AAGGTGGGCAGCGGATCT 61.012 61.111 0.00 0.00 0.00 2.75
2357 3893 1.499438 AGTCCTCCATCACCCGATCTA 59.501 52.381 0.00 0.00 0.00 1.98
2362 3898 3.832490 CCTCCATCACCCGATCTACATAA 59.168 47.826 0.00 0.00 0.00 1.90
2363 3899 4.467795 CCTCCATCACCCGATCTACATAAT 59.532 45.833 0.00 0.00 0.00 1.28
2373 3909 4.467795 CCGATCTACATAATGGGACCTCAT 59.532 45.833 0.00 0.00 0.00 2.90
2399 3935 0.474466 TGGGCCTGAGGAGGATATGG 60.474 60.000 0.65 0.00 42.93 2.74
2400 3936 1.682257 GGCCTGAGGAGGATATGGC 59.318 63.158 0.65 0.00 42.93 4.40
2404 3940 1.558756 CCTGAGGAGGATATGGCCATC 59.441 57.143 24.80 10.13 42.93 3.51
2413 3949 1.200716 GATATGGCCATCCGCATTGTG 59.799 52.381 24.80 0.00 40.31 3.33
2416 3952 1.184322 TGGCCATCCGCATTGTGTTT 61.184 50.000 0.00 0.00 40.31 2.83
2418 3954 0.798009 GCCATCCGCATTGTGTTTCG 60.798 55.000 0.00 0.00 37.47 3.46
2439 3975 3.670377 GGCCCACAAGGTGAACGC 61.670 66.667 0.00 0.00 38.26 4.84
2445 3981 1.152830 ACAAGGTGAACGCCCCAAT 59.847 52.632 0.48 0.00 0.00 3.16
2449 3985 1.602323 GGTGAACGCCCCAATGACA 60.602 57.895 0.00 0.00 0.00 3.58
2509 4045 3.512516 GGCACTTGGATCTGGCGC 61.513 66.667 0.00 0.00 0.00 6.53
2530 4066 3.737172 GCGCGTCACCAATGCCTT 61.737 61.111 8.43 0.00 36.47 4.35
2578 4114 4.039357 CGAGTCGGAGGTGCACGT 62.039 66.667 12.68 12.68 0.00 4.49
2579 4115 2.430921 GAGTCGGAGGTGCACGTG 60.431 66.667 18.18 12.28 0.00 4.49
2580 4116 3.208884 GAGTCGGAGGTGCACGTGT 62.209 63.158 18.18 0.00 0.00 4.49
2581 4117 2.279918 GTCGGAGGTGCACGTGTT 60.280 61.111 18.18 0.00 0.00 3.32
2582 4118 2.279851 TCGGAGGTGCACGTGTTG 60.280 61.111 18.18 6.36 0.00 3.33
2583 4119 3.345808 CGGAGGTGCACGTGTTGG 61.346 66.667 18.18 0.00 0.00 3.77
2584 4120 2.110213 GGAGGTGCACGTGTTGGA 59.890 61.111 18.18 0.00 0.00 3.53
2585 4121 1.525077 GGAGGTGCACGTGTTGGAA 60.525 57.895 18.18 0.00 0.00 3.53
2586 4122 1.098712 GGAGGTGCACGTGTTGGAAA 61.099 55.000 18.18 0.00 0.00 3.13
2587 4123 0.951558 GAGGTGCACGTGTTGGAAAT 59.048 50.000 18.18 0.00 0.00 2.17
2588 4124 2.147958 GAGGTGCACGTGTTGGAAATA 58.852 47.619 18.18 0.00 0.00 1.40
2589 4125 2.747446 GAGGTGCACGTGTTGGAAATAT 59.253 45.455 18.18 0.00 0.00 1.28
2590 4126 2.487762 AGGTGCACGTGTTGGAAATATG 59.512 45.455 18.38 0.00 0.00 1.78
2591 4127 2.250188 GTGCACGTGTTGGAAATATGC 58.750 47.619 18.38 0.00 0.00 3.14
2592 4128 1.201181 TGCACGTGTTGGAAATATGCC 59.799 47.619 18.38 0.00 0.00 4.40
2593 4129 1.469079 GCACGTGTTGGAAATATGCCC 60.469 52.381 18.38 0.00 0.00 5.36
2594 4130 2.091541 CACGTGTTGGAAATATGCCCT 58.908 47.619 7.58 0.00 0.00 5.19
2595 4131 3.275143 CACGTGTTGGAAATATGCCCTA 58.725 45.455 7.58 0.00 0.00 3.53
2596 4132 3.312421 CACGTGTTGGAAATATGCCCTAG 59.688 47.826 7.58 0.00 0.00 3.02
2597 4133 3.199071 ACGTGTTGGAAATATGCCCTAGA 59.801 43.478 0.00 0.00 0.00 2.43
2598 4134 3.809832 CGTGTTGGAAATATGCCCTAGAG 59.190 47.826 0.00 0.00 0.00 2.43
2599 4135 4.137543 GTGTTGGAAATATGCCCTAGAGG 58.862 47.826 0.00 0.00 39.47 3.69
2667 4203 9.046296 AGTCGTTTATTATCCAAGCTAGAATTG 57.954 33.333 0.00 0.00 0.00 2.32
2668 4204 8.827677 GTCGTTTATTATCCAAGCTAGAATTGT 58.172 33.333 0.00 0.00 0.00 2.71
2678 4214 8.262601 TCCAAGCTAGAATTGTATTGATAGGA 57.737 34.615 0.00 0.00 0.00 2.94
2679 4215 8.713971 TCCAAGCTAGAATTGTATTGATAGGAA 58.286 33.333 0.00 0.00 0.00 3.36
2680 4216 9.342308 CCAAGCTAGAATTGTATTGATAGGAAA 57.658 33.333 0.00 0.00 0.00 3.13
2683 4219 9.771534 AGCTAGAATTGTATTGATAGGAAACTC 57.228 33.333 0.00 0.00 43.67 3.01
2684 4220 9.547753 GCTAGAATTGTATTGATAGGAAACTCA 57.452 33.333 0.00 0.00 43.67 3.41
2692 4228 9.987272 TGTATTGATAGGAAACTCAGATACATG 57.013 33.333 0.00 0.00 43.67 3.21
2693 4229 9.988815 GTATTGATAGGAAACTCAGATACATGT 57.011 33.333 2.69 2.69 43.67 3.21
2694 4230 8.899427 ATTGATAGGAAACTCAGATACATGTG 57.101 34.615 9.11 0.00 43.67 3.21
2695 4231 7.423844 TGATAGGAAACTCAGATACATGTGT 57.576 36.000 9.11 0.10 43.67 3.72
2696 4232 8.533569 TGATAGGAAACTCAGATACATGTGTA 57.466 34.615 9.11 0.00 43.67 2.90
2697 4233 8.633561 TGATAGGAAACTCAGATACATGTGTAG 58.366 37.037 9.11 0.00 43.67 2.74
2698 4234 8.768501 ATAGGAAACTCAGATACATGTGTAGA 57.231 34.615 9.11 2.88 43.67 2.59
2699 4235 7.667575 AGGAAACTCAGATACATGTGTAGAT 57.332 36.000 9.11 0.00 32.90 1.98
2700 4236 8.768501 AGGAAACTCAGATACATGTGTAGATA 57.231 34.615 9.11 0.00 32.90 1.98
2701 4237 8.634444 AGGAAACTCAGATACATGTGTAGATAC 58.366 37.037 9.11 0.00 32.90 2.24
2702 4238 8.414003 GGAAACTCAGATACATGTGTAGATACA 58.586 37.037 9.11 0.00 33.52 2.29
2703 4239 9.973450 GAAACTCAGATACATGTGTAGATACAT 57.027 33.333 9.11 0.00 41.77 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.956640 TGTAATTCTTCCATGGCAAATTTATTT 57.043 25.926 18.10 4.06 0.00 1.40
13 14 9.956640 TTGTAATTCTTCCATGGCAAATTTATT 57.043 25.926 18.10 9.73 0.00 1.40
14 15 9.956640 TTTGTAATTCTTCCATGGCAAATTTAT 57.043 25.926 18.10 4.00 0.00 1.40
15 16 9.784531 TTTTGTAATTCTTCCATGGCAAATTTA 57.215 25.926 18.10 7.71 0.00 1.40
16 17 8.688747 TTTTGTAATTCTTCCATGGCAAATTT 57.311 26.923 18.10 8.48 0.00 1.82
17 18 7.391275 CCTTTTGTAATTCTTCCATGGCAAATT 59.609 33.333 6.96 14.09 0.00 1.82
18 19 6.880529 CCTTTTGTAATTCTTCCATGGCAAAT 59.119 34.615 6.96 3.56 0.00 2.32
19 20 6.042552 TCCTTTTGTAATTCTTCCATGGCAAA 59.957 34.615 6.96 6.34 0.00 3.68
20 21 5.541868 TCCTTTTGTAATTCTTCCATGGCAA 59.458 36.000 6.96 0.00 0.00 4.52
21 22 5.083122 TCCTTTTGTAATTCTTCCATGGCA 58.917 37.500 6.96 0.00 0.00 4.92
22 23 5.659440 TCCTTTTGTAATTCTTCCATGGC 57.341 39.130 6.96 0.00 0.00 4.40
23 24 7.441017 TGTTTCCTTTTGTAATTCTTCCATGG 58.559 34.615 4.97 4.97 0.00 3.66
24 25 8.359642 TCTGTTTCCTTTTGTAATTCTTCCATG 58.640 33.333 0.00 0.00 0.00 3.66
25 26 8.477419 TCTGTTTCCTTTTGTAATTCTTCCAT 57.523 30.769 0.00 0.00 0.00 3.41
26 27 7.889873 TCTGTTTCCTTTTGTAATTCTTCCA 57.110 32.000 0.00 0.00 0.00 3.53
27 28 9.249457 CTTTCTGTTTCCTTTTGTAATTCTTCC 57.751 33.333 0.00 0.00 0.00 3.46
34 35 9.418045 CAACTTTCTTTCTGTTTCCTTTTGTAA 57.582 29.630 0.00 0.00 0.00 2.41
35 36 7.544217 GCAACTTTCTTTCTGTTTCCTTTTGTA 59.456 33.333 0.00 0.00 0.00 2.41
36 37 6.368791 GCAACTTTCTTTCTGTTTCCTTTTGT 59.631 34.615 0.00 0.00 0.00 2.83
37 38 6.183360 GGCAACTTTCTTTCTGTTTCCTTTTG 60.183 38.462 0.00 0.00 0.00 2.44
38 39 5.874810 GGCAACTTTCTTTCTGTTTCCTTTT 59.125 36.000 0.00 0.00 0.00 2.27
39 40 5.046663 TGGCAACTTTCTTTCTGTTTCCTTT 60.047 36.000 0.00 0.00 30.43 3.11
40 41 4.466015 TGGCAACTTTCTTTCTGTTTCCTT 59.534 37.500 0.00 0.00 30.43 3.36
41 42 4.023291 TGGCAACTTTCTTTCTGTTTCCT 58.977 39.130 0.00 0.00 30.43 3.36
42 43 4.385358 TGGCAACTTTCTTTCTGTTTCC 57.615 40.909 0.00 0.00 37.61 3.13
43 44 9.294030 CATATATGGCAACTTTCTTTCTGTTTC 57.706 33.333 4.68 0.00 37.61 2.78
44 45 8.253113 CCATATATGGCAACTTTCTTTCTGTTT 58.747 33.333 18.77 0.00 41.75 2.83
45 46 7.147846 CCCATATATGGCAACTTTCTTTCTGTT 60.148 37.037 24.27 0.00 46.70 3.16
46 47 6.322201 CCCATATATGGCAACTTTCTTTCTGT 59.678 38.462 24.27 0.00 46.70 3.41
47 48 6.547141 TCCCATATATGGCAACTTTCTTTCTG 59.453 38.462 24.27 7.28 46.70 3.02
48 49 6.672593 TCCCATATATGGCAACTTTCTTTCT 58.327 36.000 24.27 0.00 46.70 2.52
49 50 6.959639 TCCCATATATGGCAACTTTCTTTC 57.040 37.500 24.27 0.00 46.70 2.62
50 51 7.400052 AGTTTCCCATATATGGCAACTTTCTTT 59.600 33.333 27.05 14.17 46.70 2.52
51 52 6.897413 AGTTTCCCATATATGGCAACTTTCTT 59.103 34.615 27.05 14.64 46.70 2.52
52 53 6.435164 AGTTTCCCATATATGGCAACTTTCT 58.565 36.000 27.05 16.26 46.70 2.52
53 54 6.715347 AGTTTCCCATATATGGCAACTTTC 57.285 37.500 27.05 14.90 46.70 2.62
54 55 6.777580 CCTAGTTTCCCATATATGGCAACTTT 59.222 38.462 32.31 21.25 46.70 2.66
55 56 6.126185 ACCTAGTTTCCCATATATGGCAACTT 60.126 38.462 32.31 21.38 46.70 2.66
56 57 5.372661 ACCTAGTTTCCCATATATGGCAACT 59.627 40.000 31.07 31.07 46.70 3.16
57 58 5.631119 ACCTAGTTTCCCATATATGGCAAC 58.369 41.667 24.27 24.52 46.70 4.17
58 59 5.922960 ACCTAGTTTCCCATATATGGCAA 57.077 39.130 24.27 14.96 46.70 4.52
59 60 5.610982 AGAACCTAGTTTCCCATATATGGCA 59.389 40.000 24.27 8.94 46.70 4.92
60 61 6.128138 AGAACCTAGTTTCCCATATATGGC 57.872 41.667 24.27 11.85 46.70 4.40
62 63 6.998074 TGCAAGAACCTAGTTTCCCATATATG 59.002 38.462 5.68 5.68 0.00 1.78
63 64 7.149202 TGCAAGAACCTAGTTTCCCATATAT 57.851 36.000 0.00 0.00 0.00 0.86
64 65 6.569127 TGCAAGAACCTAGTTTCCCATATA 57.431 37.500 0.00 0.00 0.00 0.86
65 66 5.450818 TGCAAGAACCTAGTTTCCCATAT 57.549 39.130 0.00 0.00 0.00 1.78
66 67 4.919774 TGCAAGAACCTAGTTTCCCATA 57.080 40.909 0.00 0.00 0.00 2.74
67 68 3.806949 TGCAAGAACCTAGTTTCCCAT 57.193 42.857 0.00 0.00 0.00 4.00
68 69 3.806949 ATGCAAGAACCTAGTTTCCCA 57.193 42.857 0.00 0.00 0.00 4.37
69 70 6.775594 AAATATGCAAGAACCTAGTTTCCC 57.224 37.500 0.00 0.00 0.00 3.97
70 71 7.063426 GCAAAAATATGCAAGAACCTAGTTTCC 59.937 37.037 0.00 0.00 45.70 3.13
71 72 7.953393 GCAAAAATATGCAAGAACCTAGTTTC 58.047 34.615 0.00 0.00 45.70 2.78
72 73 7.889589 GCAAAAATATGCAAGAACCTAGTTT 57.110 32.000 0.00 0.00 45.70 2.66
85 86 6.724694 TTTTCACAGATGGCAAAAATATGC 57.275 33.333 0.00 0.00 45.67 3.14
106 107 9.201989 AGACCTTCCTCAAATAAACTTCTTTTT 57.798 29.630 0.00 0.00 0.00 1.94
107 108 8.768501 AGACCTTCCTCAAATAAACTTCTTTT 57.231 30.769 0.00 0.00 0.00 2.27
108 109 8.221251 AGAGACCTTCCTCAAATAAACTTCTTT 58.779 33.333 0.00 0.00 35.68 2.52
109 110 7.750655 AGAGACCTTCCTCAAATAAACTTCTT 58.249 34.615 0.00 0.00 35.68 2.52
110 111 7.323052 AGAGACCTTCCTCAAATAAACTTCT 57.677 36.000 0.00 0.00 35.68 2.85
111 112 7.987750 AAGAGACCTTCCTCAAATAAACTTC 57.012 36.000 0.00 0.00 35.68 3.01
112 113 7.998964 TCAAAGAGACCTTCCTCAAATAAACTT 59.001 33.333 0.00 0.00 35.68 2.66
113 114 7.518188 TCAAAGAGACCTTCCTCAAATAAACT 58.482 34.615 0.00 0.00 35.68 2.66
114 115 7.094592 CCTCAAAGAGACCTTCCTCAAATAAAC 60.095 40.741 0.00 0.00 35.68 2.01
115 116 6.942576 CCTCAAAGAGACCTTCCTCAAATAAA 59.057 38.462 0.00 0.00 35.68 1.40
116 117 6.272324 TCCTCAAAGAGACCTTCCTCAAATAA 59.728 38.462 0.00 0.00 35.68 1.40
117 118 5.785423 TCCTCAAAGAGACCTTCCTCAAATA 59.215 40.000 0.00 0.00 35.68 1.40
118 119 4.599241 TCCTCAAAGAGACCTTCCTCAAAT 59.401 41.667 0.00 0.00 35.68 2.32
119 120 3.973973 TCCTCAAAGAGACCTTCCTCAAA 59.026 43.478 0.00 0.00 35.68 2.69
120 121 3.587498 TCCTCAAAGAGACCTTCCTCAA 58.413 45.455 0.00 0.00 35.68 3.02
121 122 3.260269 TCCTCAAAGAGACCTTCCTCA 57.740 47.619 0.00 0.00 35.68 3.86
122 123 3.618752 GCTTCCTCAAAGAGACCTTCCTC 60.619 52.174 0.00 0.00 37.12 3.71
123 124 2.304470 GCTTCCTCAAAGAGACCTTCCT 59.696 50.000 0.00 0.00 37.12 3.36
124 125 2.304470 AGCTTCCTCAAAGAGACCTTCC 59.696 50.000 0.00 0.00 37.12 3.46
125 126 3.694043 AGCTTCCTCAAAGAGACCTTC 57.306 47.619 0.00 0.00 37.12 3.46
126 127 5.365314 CCTATAGCTTCCTCAAAGAGACCTT 59.635 44.000 0.00 0.00 37.12 3.50
127 128 4.898861 CCTATAGCTTCCTCAAAGAGACCT 59.101 45.833 0.00 0.00 37.12 3.85
128 129 4.502431 GCCTATAGCTTCCTCAAAGAGACC 60.502 50.000 0.00 0.00 37.12 3.85
129 130 4.100189 TGCCTATAGCTTCCTCAAAGAGAC 59.900 45.833 0.00 0.00 44.23 3.36
130 131 4.100189 GTGCCTATAGCTTCCTCAAAGAGA 59.900 45.833 0.00 0.00 44.23 3.10
131 132 4.376146 GTGCCTATAGCTTCCTCAAAGAG 58.624 47.826 0.00 0.00 44.23 2.85
132 133 3.181475 CGTGCCTATAGCTTCCTCAAAGA 60.181 47.826 0.00 0.00 44.23 2.52
133 134 3.126831 CGTGCCTATAGCTTCCTCAAAG 58.873 50.000 0.00 0.00 44.23 2.77
134 135 2.764010 TCGTGCCTATAGCTTCCTCAAA 59.236 45.455 0.00 0.00 44.23 2.69
135 136 2.362397 CTCGTGCCTATAGCTTCCTCAA 59.638 50.000 0.00 0.00 44.23 3.02
136 137 1.957177 CTCGTGCCTATAGCTTCCTCA 59.043 52.381 0.00 0.00 44.23 3.86
137 138 1.336424 GCTCGTGCCTATAGCTTCCTC 60.336 57.143 0.00 0.00 44.23 3.71
138 139 0.676736 GCTCGTGCCTATAGCTTCCT 59.323 55.000 0.00 0.00 44.23 3.36
139 140 3.202923 GCTCGTGCCTATAGCTTCC 57.797 57.895 0.00 0.00 44.23 3.46
150 151 1.442526 CCCATCAATCTGGCTCGTGC 61.443 60.000 0.00 0.00 34.77 5.34
151 152 1.442526 GCCCATCAATCTGGCTCGTG 61.443 60.000 0.00 0.00 42.01 4.35
152 153 1.153086 GCCCATCAATCTGGCTCGT 60.153 57.895 0.00 0.00 42.01 4.18
153 154 2.249535 CGCCCATCAATCTGGCTCG 61.250 63.158 0.00 0.00 43.12 5.03
154 155 1.153086 ACGCCCATCAATCTGGCTC 60.153 57.895 0.00 0.00 43.12 4.70
155 156 1.452651 CACGCCCATCAATCTGGCT 60.453 57.895 0.00 0.00 43.12 4.75
156 157 0.463654 TACACGCCCATCAATCTGGC 60.464 55.000 0.00 0.00 41.85 4.85
157 158 1.586422 CTACACGCCCATCAATCTGG 58.414 55.000 0.00 0.00 35.95 3.86
158 159 1.138859 TCCTACACGCCCATCAATCTG 59.861 52.381 0.00 0.00 0.00 2.90
159 160 1.496060 TCCTACACGCCCATCAATCT 58.504 50.000 0.00 0.00 0.00 2.40
160 161 2.549754 CAATCCTACACGCCCATCAATC 59.450 50.000 0.00 0.00 0.00 2.67
161 162 2.575532 CAATCCTACACGCCCATCAAT 58.424 47.619 0.00 0.00 0.00 2.57
162 163 2.016604 GCAATCCTACACGCCCATCAA 61.017 52.381 0.00 0.00 0.00 2.57
163 164 0.463654 GCAATCCTACACGCCCATCA 60.464 55.000 0.00 0.00 0.00 3.07
164 165 0.179045 AGCAATCCTACACGCCCATC 60.179 55.000 0.00 0.00 0.00 3.51
165 166 1.128200 TAGCAATCCTACACGCCCAT 58.872 50.000 0.00 0.00 0.00 4.00
166 167 0.906066 TTAGCAATCCTACACGCCCA 59.094 50.000 0.00 0.00 0.00 5.36
167 168 1.583054 CTTAGCAATCCTACACGCCC 58.417 55.000 0.00 0.00 0.00 6.13
168 169 1.138266 TCCTTAGCAATCCTACACGCC 59.862 52.381 0.00 0.00 0.00 5.68
169 170 2.596904 TCCTTAGCAATCCTACACGC 57.403 50.000 0.00 0.00 0.00 5.34
170 171 3.309954 GCTTTCCTTAGCAATCCTACACG 59.690 47.826 0.00 0.00 40.89 4.49
171 172 3.309954 CGCTTTCCTTAGCAATCCTACAC 59.690 47.826 0.00 0.00 41.28 2.90
172 173 3.055385 ACGCTTTCCTTAGCAATCCTACA 60.055 43.478 0.00 0.00 41.28 2.74
173 174 3.532542 ACGCTTTCCTTAGCAATCCTAC 58.467 45.455 0.00 0.00 41.28 3.18
174 175 3.906720 ACGCTTTCCTTAGCAATCCTA 57.093 42.857 0.00 0.00 41.28 2.94
175 176 2.789409 ACGCTTTCCTTAGCAATCCT 57.211 45.000 0.00 0.00 41.28 3.24
176 177 2.223044 CGAACGCTTTCCTTAGCAATCC 60.223 50.000 0.00 0.00 41.28 3.01
177 178 2.788065 GCGAACGCTTTCCTTAGCAATC 60.788 50.000 11.97 0.00 41.28 2.67
178 179 1.130561 GCGAACGCTTTCCTTAGCAAT 59.869 47.619 11.97 0.00 41.28 3.56
179 180 0.515564 GCGAACGCTTTCCTTAGCAA 59.484 50.000 11.97 0.00 41.28 3.91
180 181 1.623081 CGCGAACGCTTTCCTTAGCA 61.623 55.000 16.66 0.00 41.28 3.49
181 182 1.058903 CGCGAACGCTTTCCTTAGC 59.941 57.895 16.66 0.00 39.32 3.09
192 193 3.081445 CAACATAAAACTAGCGCGAACG 58.919 45.455 12.10 0.00 44.07 3.95
193 194 4.061570 ACAACATAAAACTAGCGCGAAC 57.938 40.909 12.10 0.00 0.00 3.95
194 195 4.024725 ACAACAACATAAAACTAGCGCGAA 60.025 37.500 12.10 0.00 0.00 4.70
195 196 3.495377 ACAACAACATAAAACTAGCGCGA 59.505 39.130 12.10 0.00 0.00 5.87
196 197 3.597825 CACAACAACATAAAACTAGCGCG 59.402 43.478 0.00 0.00 0.00 6.86
197 198 4.778904 TCACAACAACATAAAACTAGCGC 58.221 39.130 0.00 0.00 0.00 5.92
198 199 5.335949 CGTTCACAACAACATAAAACTAGCG 59.664 40.000 0.00 0.00 0.00 4.26
199 200 6.423862 TCGTTCACAACAACATAAAACTAGC 58.576 36.000 0.00 0.00 0.00 3.42
202 203 9.790389 TTTATTCGTTCACAACAACATAAAACT 57.210 25.926 0.00 0.00 0.00 2.66
206 207 9.569167 TGTTTTTATTCGTTCACAACAACATAA 57.431 25.926 0.00 0.00 0.00 1.90
207 208 9.569167 TTGTTTTTATTCGTTCACAACAACATA 57.431 25.926 0.00 0.00 29.87 2.29
208 209 8.467402 TTGTTTTTATTCGTTCACAACAACAT 57.533 26.923 0.00 0.00 29.87 2.71
209 210 7.869016 TTGTTTTTATTCGTTCACAACAACA 57.131 28.000 0.00 0.00 29.87 3.33
210 211 8.587950 TCATTGTTTTTATTCGTTCACAACAAC 58.412 29.630 0.00 0.00 35.95 3.32
211 212 8.587950 GTCATTGTTTTTATTCGTTCACAACAA 58.412 29.630 0.00 0.00 37.14 2.83
212 213 7.755373 TGTCATTGTTTTTATTCGTTCACAACA 59.245 29.630 0.00 0.00 0.00 3.33
213 214 8.047859 GTGTCATTGTTTTTATTCGTTCACAAC 58.952 33.333 0.00 0.00 0.00 3.32
214 215 7.044641 CGTGTCATTGTTTTTATTCGTTCACAA 60.045 33.333 0.00 0.00 0.00 3.33
215 216 6.412362 CGTGTCATTGTTTTTATTCGTTCACA 59.588 34.615 0.00 0.00 0.00 3.58
216 217 6.129561 CCGTGTCATTGTTTTTATTCGTTCAC 60.130 38.462 0.00 0.00 0.00 3.18
217 218 5.910166 CCGTGTCATTGTTTTTATTCGTTCA 59.090 36.000 0.00 0.00 0.00 3.18
218 219 5.164225 GCCGTGTCATTGTTTTTATTCGTTC 60.164 40.000 0.00 0.00 0.00 3.95
219 220 4.677832 GCCGTGTCATTGTTTTTATTCGTT 59.322 37.500 0.00 0.00 0.00 3.85
220 221 4.223659 GCCGTGTCATTGTTTTTATTCGT 58.776 39.130 0.00 0.00 0.00 3.85
221 222 3.606346 GGCCGTGTCATTGTTTTTATTCG 59.394 43.478 0.00 0.00 0.00 3.34
222 223 4.805219 AGGCCGTGTCATTGTTTTTATTC 58.195 39.130 0.00 0.00 0.00 1.75
223 224 4.522789 AGAGGCCGTGTCATTGTTTTTATT 59.477 37.500 0.00 0.00 0.00 1.40
224 225 4.079253 AGAGGCCGTGTCATTGTTTTTAT 58.921 39.130 0.00 0.00 0.00 1.40
225 226 3.252215 CAGAGGCCGTGTCATTGTTTTTA 59.748 43.478 0.00 0.00 0.00 1.52
226 227 2.034558 CAGAGGCCGTGTCATTGTTTTT 59.965 45.455 0.00 0.00 0.00 1.94
227 228 1.608590 CAGAGGCCGTGTCATTGTTTT 59.391 47.619 0.00 0.00 0.00 2.43
228 229 1.238439 CAGAGGCCGTGTCATTGTTT 58.762 50.000 0.00 0.00 0.00 2.83
229 230 1.237285 GCAGAGGCCGTGTCATTGTT 61.237 55.000 9.61 0.00 0.00 2.83
230 231 1.672356 GCAGAGGCCGTGTCATTGT 60.672 57.895 9.61 0.00 0.00 2.71
231 232 1.364626 GAGCAGAGGCCGTGTCATTG 61.365 60.000 9.61 0.00 42.56 2.82
232 233 1.078848 GAGCAGAGGCCGTGTCATT 60.079 57.895 9.61 0.00 42.56 2.57
233 234 2.581354 GAGCAGAGGCCGTGTCAT 59.419 61.111 9.61 0.00 42.56 3.06
234 235 3.695606 GGAGCAGAGGCCGTGTCA 61.696 66.667 9.61 0.00 42.56 3.58
235 236 4.803426 CGGAGCAGAGGCCGTGTC 62.803 72.222 9.61 6.22 42.49 3.67
243 244 1.440893 CATGGACCTCGGAGCAGAG 59.559 63.158 0.00 0.00 37.97 3.35
244 245 2.725312 GCATGGACCTCGGAGCAGA 61.725 63.158 0.00 0.00 0.00 4.26
245 246 2.202987 GCATGGACCTCGGAGCAG 60.203 66.667 0.00 0.00 0.00 4.24
246 247 1.048160 TATGCATGGACCTCGGAGCA 61.048 55.000 10.16 0.00 36.34 4.26
247 248 0.320247 CTATGCATGGACCTCGGAGC 60.320 60.000 10.16 0.00 0.00 4.70
248 249 0.319728 CCTATGCATGGACCTCGGAG 59.680 60.000 12.26 0.00 0.00 4.63
249 250 0.105709 TCCTATGCATGGACCTCGGA 60.106 55.000 12.26 2.18 0.00 4.55
250 251 0.758734 TTCCTATGCATGGACCTCGG 59.241 55.000 12.26 0.00 32.65 4.63
251 252 1.414181 ACTTCCTATGCATGGACCTCG 59.586 52.381 12.26 6.54 32.65 4.63
252 253 3.471680 GAACTTCCTATGCATGGACCTC 58.528 50.000 12.26 7.76 32.65 3.85
253 254 2.173569 GGAACTTCCTATGCATGGACCT 59.826 50.000 12.26 2.76 32.53 3.85
254 255 2.576615 GGAACTTCCTATGCATGGACC 58.423 52.381 12.26 8.75 32.53 4.46
276 277 5.394224 AGTTAGATTTATCGCTCCCTAGC 57.606 43.478 0.00 0.00 45.86 3.42
277 278 6.982852 TGAAGTTAGATTTATCGCTCCCTAG 58.017 40.000 0.00 0.00 0.00 3.02
278 279 6.776116 TCTGAAGTTAGATTTATCGCTCCCTA 59.224 38.462 0.00 0.00 0.00 3.53
279 280 5.598830 TCTGAAGTTAGATTTATCGCTCCCT 59.401 40.000 0.00 0.00 0.00 4.20
280 281 5.844004 TCTGAAGTTAGATTTATCGCTCCC 58.156 41.667 0.00 0.00 0.00 4.30
281 282 9.646427 AATATCTGAAGTTAGATTTATCGCTCC 57.354 33.333 0.00 0.00 38.35 4.70
321 322 7.065803 ACACGAAAAGAGTCAGATCAAGAAAAA 59.934 33.333 0.00 0.00 0.00 1.94
322 323 6.538742 ACACGAAAAGAGTCAGATCAAGAAAA 59.461 34.615 0.00 0.00 0.00 2.29
323 324 6.049149 ACACGAAAAGAGTCAGATCAAGAAA 58.951 36.000 0.00 0.00 0.00 2.52
324 325 5.601662 ACACGAAAAGAGTCAGATCAAGAA 58.398 37.500 0.00 0.00 0.00 2.52
325 326 5.201713 ACACGAAAAGAGTCAGATCAAGA 57.798 39.130 0.00 0.00 0.00 3.02
326 327 4.984785 TGACACGAAAAGAGTCAGATCAAG 59.015 41.667 0.00 0.00 43.70 3.02
327 328 4.944048 TGACACGAAAAGAGTCAGATCAA 58.056 39.130 0.00 0.00 43.70 2.57
328 329 4.584327 TGACACGAAAAGAGTCAGATCA 57.416 40.909 0.00 0.00 43.70 2.92
333 334 2.821546 CAGGTGACACGAAAAGAGTCA 58.178 47.619 0.00 0.00 45.76 3.41
334 335 1.527311 GCAGGTGACACGAAAAGAGTC 59.473 52.381 0.00 0.00 40.25 3.36
335 336 1.134521 TGCAGGTGACACGAAAAGAGT 60.135 47.619 0.00 0.00 0.00 3.24
336 337 1.581934 TGCAGGTGACACGAAAAGAG 58.418 50.000 0.00 0.00 0.00 2.85
337 338 2.143122 GATGCAGGTGACACGAAAAGA 58.857 47.619 0.00 0.00 0.00 2.52
338 339 1.136252 CGATGCAGGTGACACGAAAAG 60.136 52.381 0.00 0.00 0.00 2.27
339 340 0.865111 CGATGCAGGTGACACGAAAA 59.135 50.000 0.00 0.00 0.00 2.29
340 341 0.948623 CCGATGCAGGTGACACGAAA 60.949 55.000 0.00 0.00 0.00 3.46
341 342 1.374125 CCGATGCAGGTGACACGAA 60.374 57.895 0.00 0.00 0.00 3.85
342 343 2.261361 CCGATGCAGGTGACACGA 59.739 61.111 0.00 0.00 0.00 4.35
343 344 3.490759 GCCGATGCAGGTGACACG 61.491 66.667 0.00 0.00 37.47 4.49
344 345 3.490759 CGCCGATGCAGGTGACAC 61.491 66.667 0.00 0.00 44.18 3.67
345 346 3.690280 TCGCCGATGCAGGTGACA 61.690 61.111 4.21 0.00 44.98 3.58
348 349 0.319813 TATCATCGCCGATGCAGGTG 60.320 55.000 21.83 0.00 39.63 4.00
349 350 0.037882 CTATCATCGCCGATGCAGGT 60.038 55.000 21.83 10.11 39.63 4.00
350 351 0.738762 CCTATCATCGCCGATGCAGG 60.739 60.000 23.92 23.92 39.63 4.85
351 352 0.738762 CCCTATCATCGCCGATGCAG 60.739 60.000 21.83 18.87 39.63 4.41
352 353 1.293179 CCCTATCATCGCCGATGCA 59.707 57.895 21.83 11.37 39.63 3.96
353 354 0.320771 AACCCTATCATCGCCGATGC 60.321 55.000 21.83 0.00 39.63 3.91
354 355 1.270305 ACAACCCTATCATCGCCGATG 60.270 52.381 20.70 20.70 41.00 3.84
355 356 1.048601 ACAACCCTATCATCGCCGAT 58.951 50.000 0.00 0.00 0.00 4.18
356 357 1.694844 TACAACCCTATCATCGCCGA 58.305 50.000 0.00 0.00 0.00 5.54
357 358 2.337583 CATACAACCCTATCATCGCCG 58.662 52.381 0.00 0.00 0.00 6.46
358 359 2.076863 GCATACAACCCTATCATCGCC 58.923 52.381 0.00 0.00 0.00 5.54
359 360 1.726791 CGCATACAACCCTATCATCGC 59.273 52.381 0.00 0.00 0.00 4.58
360 361 3.026630 ACGCATACAACCCTATCATCG 57.973 47.619 0.00 0.00 0.00 3.84
361 362 4.389077 GCTAACGCATACAACCCTATCATC 59.611 45.833 0.00 0.00 35.78 2.92
362 363 4.202315 TGCTAACGCATACAACCCTATCAT 60.202 41.667 0.00 0.00 42.25 2.45
363 364 3.133183 TGCTAACGCATACAACCCTATCA 59.867 43.478 0.00 0.00 42.25 2.15
364 365 3.724374 TGCTAACGCATACAACCCTATC 58.276 45.455 0.00 0.00 42.25 2.08
365 366 3.830744 TGCTAACGCATACAACCCTAT 57.169 42.857 0.00 0.00 42.25 2.57
377 378 5.869753 ATCATTAATCCTGATGCTAACGC 57.130 39.130 0.00 0.00 32.20 4.84
378 379 9.979270 GAAATATCATTAATCCTGATGCTAACG 57.021 33.333 1.12 0.00 35.12 3.18
386 387 9.466497 GCCCATAAGAAATATCATTAATCCTGA 57.534 33.333 0.00 0.00 0.00 3.86
387 388 9.471702 AGCCCATAAGAAATATCATTAATCCTG 57.528 33.333 0.00 0.00 0.00 3.86
388 389 9.471702 CAGCCCATAAGAAATATCATTAATCCT 57.528 33.333 0.00 0.00 0.00 3.24
389 390 8.689972 CCAGCCCATAAGAAATATCATTAATCC 58.310 37.037 0.00 0.00 0.00 3.01
390 391 9.466497 TCCAGCCCATAAGAAATATCATTAATC 57.534 33.333 0.00 0.00 0.00 1.75
391 392 9.471702 CTCCAGCCCATAAGAAATATCATTAAT 57.528 33.333 0.00 0.00 0.00 1.40
392 393 7.394359 GCTCCAGCCCATAAGAAATATCATTAA 59.606 37.037 0.00 0.00 34.31 1.40
393 394 6.886459 GCTCCAGCCCATAAGAAATATCATTA 59.114 38.462 0.00 0.00 34.31 1.90
394 395 5.713861 GCTCCAGCCCATAAGAAATATCATT 59.286 40.000 0.00 0.00 34.31 2.57
395 396 5.014966 AGCTCCAGCCCATAAGAAATATCAT 59.985 40.000 0.00 0.00 43.38 2.45
396 397 4.352001 AGCTCCAGCCCATAAGAAATATCA 59.648 41.667 0.00 0.00 43.38 2.15
397 398 4.916183 AGCTCCAGCCCATAAGAAATATC 58.084 43.478 0.00 0.00 43.38 1.63
398 399 5.330648 AAGCTCCAGCCCATAAGAAATAT 57.669 39.130 0.00 0.00 43.38 1.28
1859 1860 0.179065 AAAGGGTTATCGCCTACGGC 60.179 55.000 0.00 0.00 46.75 5.68
1860 1861 1.134610 ACAAAGGGTTATCGCCTACGG 60.135 52.381 0.00 0.00 40.63 4.02
1861 1862 2.304751 ACAAAGGGTTATCGCCTACG 57.695 50.000 0.00 0.00 42.01 3.51
1862 1863 3.133542 AGGTACAAAGGGTTATCGCCTAC 59.866 47.826 0.00 0.00 0.00 3.18
1863 1864 3.377573 AGGTACAAAGGGTTATCGCCTA 58.622 45.455 0.00 0.00 0.00 3.93
1864 1865 2.193993 AGGTACAAAGGGTTATCGCCT 58.806 47.619 0.00 0.00 0.00 5.52
1865 1866 2.704464 AGGTACAAAGGGTTATCGCC 57.296 50.000 0.00 0.00 0.00 5.54
1866 1867 5.505159 GCATTAAGGTACAAAGGGTTATCGC 60.505 44.000 0.00 0.00 0.00 4.58
1867 1868 5.008316 GGCATTAAGGTACAAAGGGTTATCG 59.992 44.000 0.00 0.00 0.00 2.92
1868 1869 5.889289 TGGCATTAAGGTACAAAGGGTTATC 59.111 40.000 0.00 0.00 0.00 1.75
1869 1870 5.833340 TGGCATTAAGGTACAAAGGGTTAT 58.167 37.500 0.00 0.00 0.00 1.89
1870 1871 5.258051 CTGGCATTAAGGTACAAAGGGTTA 58.742 41.667 0.00 0.00 0.00 2.85
1871 1872 4.086457 CTGGCATTAAGGTACAAAGGGTT 58.914 43.478 0.00 0.00 0.00 4.11
1872 1873 3.563479 CCTGGCATTAAGGTACAAAGGGT 60.563 47.826 0.00 0.00 0.00 4.34
1873 1874 3.023832 CCTGGCATTAAGGTACAAAGGG 58.976 50.000 0.00 0.00 0.00 3.95
1874 1875 3.443681 CACCTGGCATTAAGGTACAAAGG 59.556 47.826 0.00 0.00 46.58 3.11
1875 1876 3.119495 GCACCTGGCATTAAGGTACAAAG 60.119 47.826 0.00 0.00 46.58 2.77
1876 1877 2.823154 GCACCTGGCATTAAGGTACAAA 59.177 45.455 0.00 0.00 46.58 2.83
1877 1878 2.041081 AGCACCTGGCATTAAGGTACAA 59.959 45.455 0.00 0.00 46.58 2.41
1878 1879 1.633432 AGCACCTGGCATTAAGGTACA 59.367 47.619 0.00 0.00 46.58 2.90
1879 1880 2.420058 AGCACCTGGCATTAAGGTAC 57.580 50.000 0.00 0.00 46.58 3.34
1880 1881 3.449746 AAAGCACCTGGCATTAAGGTA 57.550 42.857 0.00 0.00 46.58 3.08
1882 1883 5.105392 TGAATTAAAGCACCTGGCATTAAGG 60.105 40.000 0.00 0.00 45.51 2.69
1883 1884 5.964758 TGAATTAAAGCACCTGGCATTAAG 58.035 37.500 0.00 0.00 45.51 1.85
1884 1885 5.624281 GCTGAATTAAAGCACCTGGCATTAA 60.624 40.000 7.56 0.00 46.12 1.40
1889 1890 1.468054 CGCTGAATTAAAGCACCTGGC 60.468 52.381 11.90 0.00 40.86 4.85
1890 1891 1.812571 ACGCTGAATTAAAGCACCTGG 59.187 47.619 11.90 0.00 40.86 4.45
1891 1892 3.559238 AACGCTGAATTAAAGCACCTG 57.441 42.857 11.90 0.34 40.86 4.00
1892 1893 4.438744 GCATAACGCTGAATTAAAGCACCT 60.439 41.667 11.90 0.39 40.86 4.00
1893 1894 3.791353 GCATAACGCTGAATTAAAGCACC 59.209 43.478 11.90 0.00 40.86 5.01
1894 1895 3.791353 GGCATAACGCTGAATTAAAGCAC 59.209 43.478 11.90 0.00 40.86 4.40
1895 1896 3.181491 GGGCATAACGCTGAATTAAAGCA 60.181 43.478 11.90 0.00 40.86 3.91
1896 1897 3.372060 GGGCATAACGCTGAATTAAAGC 58.628 45.455 3.06 3.06 41.91 3.51
1897 1898 3.632145 AGGGGCATAACGCTGAATTAAAG 59.368 43.478 0.00 0.00 41.91 1.85
1898 1899 3.626930 AGGGGCATAACGCTGAATTAAA 58.373 40.909 0.00 0.00 41.91 1.52
1899 1900 3.211045 GAGGGGCATAACGCTGAATTAA 58.789 45.455 0.00 0.00 41.91 1.40
1900 1901 2.171659 TGAGGGGCATAACGCTGAATTA 59.828 45.455 0.00 0.00 41.91 1.40
1901 1902 1.064758 TGAGGGGCATAACGCTGAATT 60.065 47.619 0.00 0.00 41.91 2.17
1902 1903 0.546122 TGAGGGGCATAACGCTGAAT 59.454 50.000 0.00 0.00 41.91 2.57
1903 1904 0.326595 TTGAGGGGCATAACGCTGAA 59.673 50.000 0.00 0.00 41.91 3.02
1904 1905 0.107703 CTTGAGGGGCATAACGCTGA 60.108 55.000 0.00 0.00 41.91 4.26
1905 1906 1.097547 CCTTGAGGGGCATAACGCTG 61.098 60.000 0.00 0.00 41.91 5.18
1906 1907 1.224592 CCTTGAGGGGCATAACGCT 59.775 57.895 0.00 0.00 41.91 5.07
1907 1908 3.827634 CCTTGAGGGGCATAACGC 58.172 61.111 0.00 0.00 41.28 4.84
1917 1918 2.225017 ACCCACATACAAACCCTTGAGG 60.225 50.000 0.00 0.00 43.78 3.86
1918 1919 2.819608 CACCCACATACAAACCCTTGAG 59.180 50.000 0.00 0.00 36.33 3.02
1919 1920 2.489985 CCACCCACATACAAACCCTTGA 60.490 50.000 0.00 0.00 36.33 3.02
1920 1921 1.892474 CCACCCACATACAAACCCTTG 59.108 52.381 0.00 0.00 38.61 3.61
1921 1922 1.203125 CCCACCCACATACAAACCCTT 60.203 52.381 0.00 0.00 0.00 3.95
1922 1923 0.407918 CCCACCCACATACAAACCCT 59.592 55.000 0.00 0.00 0.00 4.34
1923 1924 1.254975 GCCCACCCACATACAAACCC 61.255 60.000 0.00 0.00 0.00 4.11
1924 1925 0.251608 AGCCCACCCACATACAAACC 60.252 55.000 0.00 0.00 0.00 3.27
1925 1926 1.272212 CAAGCCCACCCACATACAAAC 59.728 52.381 0.00 0.00 0.00 2.93
1926 1927 1.626686 CAAGCCCACCCACATACAAA 58.373 50.000 0.00 0.00 0.00 2.83
1927 1928 0.251564 CCAAGCCCACCCACATACAA 60.252 55.000 0.00 0.00 0.00 2.41
1928 1929 1.382240 CCAAGCCCACCCACATACA 59.618 57.895 0.00 0.00 0.00 2.29
1929 1930 1.379843 CCCAAGCCCACCCACATAC 60.380 63.158 0.00 0.00 0.00 2.39
1930 1931 1.854979 ACCCAAGCCCACCCACATA 60.855 57.895 0.00 0.00 0.00 2.29
1931 1932 3.192630 ACCCAAGCCCACCCACAT 61.193 61.111 0.00 0.00 0.00 3.21
1932 1933 4.217210 CACCCAAGCCCACCCACA 62.217 66.667 0.00 0.00 0.00 4.17
1933 1934 4.994756 CCACCCAAGCCCACCCAC 62.995 72.222 0.00 0.00 0.00 4.61
1935 1936 4.678743 GTCCACCCAAGCCCACCC 62.679 72.222 0.00 0.00 0.00 4.61
1936 1937 4.678743 GGTCCACCCAAGCCCACC 62.679 72.222 0.00 0.00 0.00 4.61
1937 1938 3.897122 TGGTCCACCCAAGCCCAC 61.897 66.667 0.00 0.00 41.50 4.61
1944 1945 2.604152 GGTTGGTTGGTCCACCCA 59.396 61.111 3.51 3.51 46.48 4.51
1948 1949 2.317378 TGGGTGGTTGGTTGGTCCA 61.317 57.895 0.00 0.00 45.60 4.02
1949 1950 1.830847 GTGGGTGGTTGGTTGGTCC 60.831 63.158 0.00 0.00 0.00 4.46
1950 1951 1.830847 GGTGGGTGGTTGGTTGGTC 60.831 63.158 0.00 0.00 0.00 4.02
1951 1952 2.280753 GGTGGGTGGTTGGTTGGT 59.719 61.111 0.00 0.00 0.00 3.67
1952 1953 2.523168 GGGTGGGTGGTTGGTTGG 60.523 66.667 0.00 0.00 0.00 3.77
1953 1954 0.762461 AATGGGTGGGTGGTTGGTTG 60.762 55.000 0.00 0.00 0.00 3.77
1954 1955 0.471022 GAATGGGTGGGTGGTTGGTT 60.471 55.000 0.00 0.00 0.00 3.67
1955 1956 1.155155 GAATGGGTGGGTGGTTGGT 59.845 57.895 0.00 0.00 0.00 3.67
1956 1957 1.154921 TGAATGGGTGGGTGGTTGG 59.845 57.895 0.00 0.00 0.00 3.77
1957 1958 1.184970 GGTGAATGGGTGGGTGGTTG 61.185 60.000 0.00 0.00 0.00 3.77
1958 1959 1.155155 GGTGAATGGGTGGGTGGTT 59.845 57.895 0.00 0.00 0.00 3.67
1959 1960 2.851045 GGTGAATGGGTGGGTGGT 59.149 61.111 0.00 0.00 0.00 4.16
1960 1961 2.037208 GGGTGAATGGGTGGGTGG 59.963 66.667 0.00 0.00 0.00 4.61
1961 1962 2.037208 GGGGTGAATGGGTGGGTG 59.963 66.667 0.00 0.00 0.00 4.61
1962 1963 3.272847 GGGGGTGAATGGGTGGGT 61.273 66.667 0.00 0.00 0.00 4.51
1963 1964 2.514516 GAAGGGGGTGAATGGGTGGG 62.515 65.000 0.00 0.00 0.00 4.61
1964 1965 1.000359 GAAGGGGGTGAATGGGTGG 60.000 63.158 0.00 0.00 0.00 4.61
1965 1966 1.000359 GGAAGGGGGTGAATGGGTG 60.000 63.158 0.00 0.00 0.00 4.61
1966 1967 0.122435 TAGGAAGGGGGTGAATGGGT 59.878 55.000 0.00 0.00 0.00 4.51
1967 1968 0.551396 GTAGGAAGGGGGTGAATGGG 59.449 60.000 0.00 0.00 0.00 4.00
1968 1969 0.180406 CGTAGGAAGGGGGTGAATGG 59.820 60.000 0.00 0.00 0.00 3.16
1969 1970 1.139058 CTCGTAGGAAGGGGGTGAATG 59.861 57.143 0.00 0.00 0.00 2.67
1970 1971 1.497161 CTCGTAGGAAGGGGGTGAAT 58.503 55.000 0.00 0.00 0.00 2.57
1971 1972 1.262640 GCTCGTAGGAAGGGGGTGAA 61.263 60.000 0.00 0.00 0.00 3.18
1972 1973 1.684734 GCTCGTAGGAAGGGGGTGA 60.685 63.158 0.00 0.00 0.00 4.02
1973 1974 1.338136 ATGCTCGTAGGAAGGGGGTG 61.338 60.000 0.00 0.00 0.00 4.61
1974 1975 1.003051 ATGCTCGTAGGAAGGGGGT 59.997 57.895 0.00 0.00 0.00 4.95
1975 1976 0.760945 AGATGCTCGTAGGAAGGGGG 60.761 60.000 0.00 0.00 0.00 5.40
1976 1977 1.996798 TAGATGCTCGTAGGAAGGGG 58.003 55.000 0.00 0.00 0.00 4.79
1977 1978 3.129638 GCTATAGATGCTCGTAGGAAGGG 59.870 52.174 3.21 0.00 0.00 3.95
1978 1979 3.129638 GGCTATAGATGCTCGTAGGAAGG 59.870 52.174 3.21 0.00 0.00 3.46
1979 1980 3.759086 TGGCTATAGATGCTCGTAGGAAG 59.241 47.826 3.21 0.00 0.00 3.46
1980 1981 3.759086 CTGGCTATAGATGCTCGTAGGAA 59.241 47.826 3.21 0.00 0.00 3.36
1981 1982 3.348119 CTGGCTATAGATGCTCGTAGGA 58.652 50.000 3.21 0.00 0.00 2.94
1982 1983 2.425312 CCTGGCTATAGATGCTCGTAGG 59.575 54.545 3.21 0.00 0.00 3.18
1983 1984 2.159310 GCCTGGCTATAGATGCTCGTAG 60.159 54.545 12.43 0.00 0.00 3.51
1984 1985 1.819288 GCCTGGCTATAGATGCTCGTA 59.181 52.381 12.43 0.00 0.00 3.43
1985 1986 0.605589 GCCTGGCTATAGATGCTCGT 59.394 55.000 12.43 0.00 0.00 4.18
1986 1987 0.894141 AGCCTGGCTATAGATGCTCG 59.106 55.000 21.98 0.00 36.99 5.03
1987 1988 1.206849 GGAGCCTGGCTATAGATGCTC 59.793 57.143 23.44 17.75 39.88 4.26
1988 1989 1.274712 GGAGCCTGGCTATAGATGCT 58.725 55.000 23.44 4.76 39.88 3.79
1989 1990 0.251634 GGGAGCCTGGCTATAGATGC 59.748 60.000 23.44 6.98 39.88 3.91
1990 1991 0.534412 CGGGAGCCTGGCTATAGATG 59.466 60.000 23.44 4.84 39.88 2.90
1991 1992 0.409876 TCGGGAGCCTGGCTATAGAT 59.590 55.000 23.44 0.00 39.88 1.98
1992 1993 0.187606 TTCGGGAGCCTGGCTATAGA 59.812 55.000 23.44 17.30 39.88 1.98
1993 1994 1.048601 TTTCGGGAGCCTGGCTATAG 58.951 55.000 23.44 15.20 39.88 1.31
1994 1995 0.756903 GTTTCGGGAGCCTGGCTATA 59.243 55.000 23.44 4.33 39.88 1.31
1995 1996 1.527370 GTTTCGGGAGCCTGGCTAT 59.473 57.895 23.44 0.00 39.88 2.97
1996 1997 2.666098 GGTTTCGGGAGCCTGGCTA 61.666 63.158 23.44 2.26 39.88 3.93
1997 1998 4.035102 GGTTTCGGGAGCCTGGCT 62.035 66.667 23.64 23.64 43.88 4.75
1998 1999 3.978571 GAGGTTTCGGGAGCCTGGC 62.979 68.421 11.65 11.65 31.89 4.85
1999 2000 2.269241 GAGGTTTCGGGAGCCTGG 59.731 66.667 0.00 0.00 31.89 4.45
2000 2001 0.976073 TAGGAGGTTTCGGGAGCCTG 60.976 60.000 0.00 0.00 31.89 4.85
2001 2002 0.031010 ATAGGAGGTTTCGGGAGCCT 60.031 55.000 0.00 0.00 34.93 4.58
2002 2003 1.343789 GTATAGGAGGTTTCGGGAGCC 59.656 57.143 0.00 0.00 0.00 4.70
2003 2004 1.343789 GGTATAGGAGGTTTCGGGAGC 59.656 57.143 0.00 0.00 0.00 4.70
2004 2005 1.969208 GGGTATAGGAGGTTTCGGGAG 59.031 57.143 0.00 0.00 0.00 4.30
2005 2006 1.577242 AGGGTATAGGAGGTTTCGGGA 59.423 52.381 0.00 0.00 0.00 5.14
2006 2007 2.098618 AGGGTATAGGAGGTTTCGGG 57.901 55.000 0.00 0.00 0.00 5.14
2007 2008 2.104281 CCAAGGGTATAGGAGGTTTCGG 59.896 54.545 0.00 0.00 0.00 4.30
2008 2009 3.036091 TCCAAGGGTATAGGAGGTTTCG 58.964 50.000 0.00 0.00 0.00 3.46
2009 2010 3.778629 TGTCCAAGGGTATAGGAGGTTTC 59.221 47.826 0.00 0.00 30.78 2.78
2010 2011 3.780850 CTGTCCAAGGGTATAGGAGGTTT 59.219 47.826 0.00 0.00 30.78 3.27
2011 2012 3.013648 TCTGTCCAAGGGTATAGGAGGTT 59.986 47.826 0.00 0.00 30.78 3.50
2012 2013 2.590611 TCTGTCCAAGGGTATAGGAGGT 59.409 50.000 0.00 0.00 30.78 3.85
2013 2014 3.330126 TCTGTCCAAGGGTATAGGAGG 57.670 52.381 0.00 0.00 30.78 4.30
2014 2015 3.580458 CCATCTGTCCAAGGGTATAGGAG 59.420 52.174 0.00 0.00 30.78 3.69
2015 2016 3.587498 CCATCTGTCCAAGGGTATAGGA 58.413 50.000 0.00 0.00 0.00 2.94
2016 2017 2.039084 GCCATCTGTCCAAGGGTATAGG 59.961 54.545 0.00 0.00 0.00 2.57
2017 2018 2.039084 GGCCATCTGTCCAAGGGTATAG 59.961 54.545 0.00 0.00 0.00 1.31
2018 2019 2.054799 GGCCATCTGTCCAAGGGTATA 58.945 52.381 0.00 0.00 0.00 1.47
2019 2020 0.846693 GGCCATCTGTCCAAGGGTAT 59.153 55.000 0.00 0.00 0.00 2.73
2020 2021 0.253160 AGGCCATCTGTCCAAGGGTA 60.253 55.000 5.01 0.00 0.00 3.69
2021 2022 1.542375 AGGCCATCTGTCCAAGGGT 60.542 57.895 5.01 0.00 0.00 4.34
2022 2023 1.077212 CAGGCCATCTGTCCAAGGG 60.077 63.158 5.01 0.00 38.64 3.95
2023 2024 1.077212 CCAGGCCATCTGTCCAAGG 60.077 63.158 5.01 0.00 41.83 3.61
2024 2025 0.393537 GACCAGGCCATCTGTCCAAG 60.394 60.000 5.01 0.00 41.83 3.61
2025 2026 1.133181 TGACCAGGCCATCTGTCCAA 61.133 55.000 5.01 0.00 41.83 3.53
2026 2027 0.915872 ATGACCAGGCCATCTGTCCA 60.916 55.000 5.01 0.00 41.83 4.02
2027 2028 0.257039 AATGACCAGGCCATCTGTCC 59.743 55.000 5.01 0.00 41.83 4.02
2028 2029 1.065199 TCAATGACCAGGCCATCTGTC 60.065 52.381 5.01 6.26 41.83 3.51
2029 2030 0.994247 TCAATGACCAGGCCATCTGT 59.006 50.000 5.01 0.00 41.83 3.41
2030 2031 1.386533 GTCAATGACCAGGCCATCTG 58.613 55.000 5.01 0.00 43.00 2.90
2031 2032 3.890527 GTCAATGACCAGGCCATCT 57.109 52.632 5.01 0.00 0.00 2.90
2041 2042 5.217393 GGTTTTTCTTTACCGGTCAATGAC 58.783 41.667 12.40 4.51 0.00 3.06
2042 2043 4.278919 GGGTTTTTCTTTACCGGTCAATGA 59.721 41.667 12.40 9.11 35.19 2.57
2043 2044 4.279922 AGGGTTTTTCTTTACCGGTCAATG 59.720 41.667 12.40 6.84 35.19 2.82
2044 2045 4.476297 AGGGTTTTTCTTTACCGGTCAAT 58.524 39.130 12.40 0.00 35.19 2.57
2045 2046 3.900971 AGGGTTTTTCTTTACCGGTCAA 58.099 40.909 12.40 5.44 35.19 3.18
2046 2047 3.581265 AGGGTTTTTCTTTACCGGTCA 57.419 42.857 12.40 0.00 35.19 4.02
2047 2048 5.560760 CGTTTAGGGTTTTTCTTTACCGGTC 60.561 44.000 12.40 0.00 35.19 4.79
2054 2055 5.069914 AGGCATTCGTTTAGGGTTTTTCTTT 59.930 36.000 0.00 0.00 0.00 2.52
2072 2077 6.252599 TCATTTAGGAGTGTATGAGGCATT 57.747 37.500 0.00 0.00 0.00 3.56
2074 2079 5.509670 CGATCATTTAGGAGTGTATGAGGCA 60.510 44.000 0.00 0.00 31.20 4.75
2201 2206 3.844211 AGTATATGTGGTGTCTTGGTGGT 59.156 43.478 0.00 0.00 0.00 4.16
2225 2230 1.065345 GTTAGGGGAGCAGAAGGGAAC 60.065 57.143 0.00 0.00 0.00 3.62
2235 2240 2.944542 GCTAGGTTTTGGTTAGGGGAGC 60.945 54.545 0.00 0.00 0.00 4.70
2247 2252 0.955919 GAGTGCAGCGGCTAGGTTTT 60.956 55.000 10.92 0.00 41.91 2.43
2256 2261 4.767255 GGGAGTGGAGTGCAGCGG 62.767 72.222 0.00 0.00 0.00 5.52
2258 2263 3.322318 GAGGGGAGTGGAGTGCAGC 62.322 68.421 0.00 0.00 0.00 5.25
2259 2264 2.664081 GGAGGGGAGTGGAGTGCAG 61.664 68.421 0.00 0.00 0.00 4.41
2297 2302 2.493675 TGTTGGAGAAGGTCAGAGATCG 59.506 50.000 0.00 0.00 0.00 3.69
2316 2321 3.628646 GATCCGCTGCCCACCTTGT 62.629 63.158 0.00 0.00 0.00 3.16
2327 3863 0.105760 ATGGAGGACTCAGATCCGCT 60.106 55.000 1.32 0.00 44.22 5.52
2335 3871 0.032117 ATCGGGTGATGGAGGACTCA 60.032 55.000 1.32 0.00 32.21 3.41
2399 3935 0.798009 CGAAACACAATGCGGATGGC 60.798 55.000 0.00 0.00 43.96 4.40
2400 3936 0.798009 GCGAAACACAATGCGGATGG 60.798 55.000 0.00 0.00 0.00 3.51
2404 3940 2.501650 CGGCGAAACACAATGCGG 60.502 61.111 0.00 0.00 0.00 5.69
2439 3975 1.745087 CAAGTCCGATTGTCATTGGGG 59.255 52.381 0.00 0.00 34.80 4.96
2465 4001 1.506493 CAGACGCTATGGATTCCTGC 58.494 55.000 3.95 5.22 0.00 4.85
2509 4045 3.803082 CATTGGTGACGCGCCTGG 61.803 66.667 5.73 0.00 34.70 4.45
2578 4114 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
2641 4177 9.046296 CAATTCTAGCTTGGATAATAAACGACT 57.954 33.333 0.00 0.00 0.00 4.18
2642 4178 8.827677 ACAATTCTAGCTTGGATAATAAACGAC 58.172 33.333 0.00 0.00 0.00 4.34
2643 4179 8.958119 ACAATTCTAGCTTGGATAATAAACGA 57.042 30.769 0.00 0.00 0.00 3.85
2652 4188 8.884323 TCCTATCAATACAATTCTAGCTTGGAT 58.116 33.333 0.00 0.00 0.00 3.41
2653 4189 8.262601 TCCTATCAATACAATTCTAGCTTGGA 57.737 34.615 0.00 0.00 0.00 3.53
2654 4190 8.908786 TTCCTATCAATACAATTCTAGCTTGG 57.091 34.615 0.00 0.00 0.00 3.61
2657 4193 9.771534 GAGTTTCCTATCAATACAATTCTAGCT 57.228 33.333 0.00 0.00 0.00 3.32
2658 4194 9.547753 TGAGTTTCCTATCAATACAATTCTAGC 57.452 33.333 0.00 0.00 0.00 3.42
2666 4202 9.987272 CATGTATCTGAGTTTCCTATCAATACA 57.013 33.333 0.00 0.00 35.88 2.29
2667 4203 9.988815 ACATGTATCTGAGTTTCCTATCAATAC 57.011 33.333 0.00 0.00 0.00 1.89
2668 4204 9.987272 CACATGTATCTGAGTTTCCTATCAATA 57.013 33.333 0.00 0.00 0.00 1.90
2669 4205 8.489489 ACACATGTATCTGAGTTTCCTATCAAT 58.511 33.333 0.00 0.00 0.00 2.57
2670 4206 7.851228 ACACATGTATCTGAGTTTCCTATCAA 58.149 34.615 0.00 0.00 0.00 2.57
2671 4207 7.423844 ACACATGTATCTGAGTTTCCTATCA 57.576 36.000 0.00 0.00 0.00 2.15
2672 4208 8.851145 TCTACACATGTATCTGAGTTTCCTATC 58.149 37.037 0.00 0.00 0.00 2.08
2673 4209 8.768501 TCTACACATGTATCTGAGTTTCCTAT 57.231 34.615 0.00 0.00 0.00 2.57
2674 4210 8.768501 ATCTACACATGTATCTGAGTTTCCTA 57.231 34.615 0.00 0.00 0.00 2.94
2675 4211 7.667575 ATCTACACATGTATCTGAGTTTCCT 57.332 36.000 0.00 0.00 0.00 3.36
2676 4212 8.414003 TGTATCTACACATGTATCTGAGTTTCC 58.586 37.037 0.00 0.00 0.00 3.13
2677 4213 9.973450 ATGTATCTACACATGTATCTGAGTTTC 57.027 33.333 0.00 0.00 39.30 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.