Multiple sequence alignment - TraesCS7A01G066500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G066500 chr7A 100.000 2591 0 0 1 2591 33367439 33370029 0.000000e+00 4785
1 TraesCS7A01G066500 chr7A 95.000 80 4 0 2045 2124 33369229 33369308 2.710000e-25 126
2 TraesCS7A01G066500 chr7A 95.000 80 4 0 1791 1870 33369483 33369562 2.710000e-25 126
3 TraesCS7A01G066500 chr5A 97.052 814 24 0 1 814 702642112 702642925 0.000000e+00 1371
4 TraesCS7A01G066500 chr5A 95.695 813 35 0 1 813 617093393 617092581 0.000000e+00 1308
5 TraesCS7A01G066500 chr5D 96.192 814 31 0 1 814 21458327 21457514 0.000000e+00 1332
6 TraesCS7A01G066500 chr1D 92.611 812 59 1 2 813 450020733 450021543 0.000000e+00 1166
7 TraesCS7A01G066500 chr5B 91.278 814 71 0 1 814 465989178 465989991 0.000000e+00 1110
8 TraesCS7A01G066500 chr5B 88.329 814 93 2 2 814 635390201 635391013 0.000000e+00 976
9 TraesCS7A01G066500 chr7D 86.321 1060 94 31 829 1870 33051919 33052945 0.000000e+00 1107
10 TraesCS7A01G066500 chr7B 89.545 813 85 0 2 814 37588841 37588029 0.000000e+00 1031
11 TraesCS7A01G066500 chr7B 89.545 813 85 0 2 814 67342033 67341221 0.000000e+00 1031
12 TraesCS7A01G066500 chr1B 88.821 814 89 2 2 814 40726500 40725688 0.000000e+00 998
13 TraesCS7A01G066500 chr4A 89.500 800 52 16 812 1591 693279637 693280424 0.000000e+00 983
14 TraesCS7A01G066500 chr4A 91.667 132 11 0 2459 2590 693281004 693281135 1.580000e-42 183
15 TraesCS7A01G066500 chr4A 85.470 117 11 3 1896 2006 693280647 693280763 1.630000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G066500 chr7A 33367439 33370029 2590 False 1679.000000 4785 96.666667 1 2591 3 chr7A.!!$F1 2590
1 TraesCS7A01G066500 chr5A 702642112 702642925 813 False 1371.000000 1371 97.052000 1 814 1 chr5A.!!$F1 813
2 TraesCS7A01G066500 chr5A 617092581 617093393 812 True 1308.000000 1308 95.695000 1 813 1 chr5A.!!$R1 812
3 TraesCS7A01G066500 chr5D 21457514 21458327 813 True 1332.000000 1332 96.192000 1 814 1 chr5D.!!$R1 813
4 TraesCS7A01G066500 chr1D 450020733 450021543 810 False 1166.000000 1166 92.611000 2 813 1 chr1D.!!$F1 811
5 TraesCS7A01G066500 chr5B 465989178 465989991 813 False 1110.000000 1110 91.278000 1 814 1 chr5B.!!$F1 813
6 TraesCS7A01G066500 chr5B 635390201 635391013 812 False 976.000000 976 88.329000 2 814 1 chr5B.!!$F2 812
7 TraesCS7A01G066500 chr7D 33051919 33052945 1026 False 1107.000000 1107 86.321000 829 1870 1 chr7D.!!$F1 1041
8 TraesCS7A01G066500 chr7B 37588029 37588841 812 True 1031.000000 1031 89.545000 2 814 1 chr7B.!!$R1 812
9 TraesCS7A01G066500 chr7B 67341221 67342033 812 True 1031.000000 1031 89.545000 2 814 1 chr7B.!!$R2 812
10 TraesCS7A01G066500 chr1B 40725688 40726500 812 True 998.000000 998 88.821000 2 814 1 chr1B.!!$R1 812
11 TraesCS7A01G066500 chr4A 693279637 693281135 1498 False 427.666667 983 88.879000 812 2590 3 chr4A.!!$F1 1778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
368 369 0.888285 GCCTGTCTTGCAAGCAGAGT 60.888 55.0 33.55 0.0 34.76 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2045 2101 0.038166 AAAGCCTGCAGATCGGGAAA 59.962 50.0 17.39 0.0 44.37 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 4.192317 CTCTTTCTGTACCCAGTTATGCC 58.808 47.826 0.00 0.00 39.82 4.40
283 284 7.308770 CCAGTGAAGCATCAAGAAAATCTGTAA 60.309 37.037 0.00 0.00 37.30 2.41
368 369 0.888285 GCCTGTCTTGCAAGCAGAGT 60.888 55.000 33.55 0.00 34.76 3.24
542 543 2.550208 CCCGAGGTAGCTTGAAACAAGT 60.550 50.000 10.90 3.59 0.00 3.16
617 618 2.884639 CTCCGGATGACAACACCTTTTT 59.115 45.455 3.57 0.00 0.00 1.94
814 815 6.749923 AGAACACTGAAGATTTATCCAAGC 57.250 37.500 0.00 0.00 0.00 4.01
819 820 8.579850 ACACTGAAGATTTATCCAAGCAATTA 57.420 30.769 0.00 0.00 0.00 1.40
837 838 5.519722 CAATTAGATACCGCCAATCCAAAC 58.480 41.667 0.00 0.00 0.00 2.93
890 891 1.302511 CAAACCCACGAGACCCAGG 60.303 63.158 0.00 0.00 0.00 4.45
892 893 4.640690 ACCCACGAGACCCAGGCT 62.641 66.667 0.00 0.00 0.00 4.58
930 938 2.202676 CTCCGCTCGCTTCCAGAC 60.203 66.667 0.00 0.00 0.00 3.51
931 939 2.676822 TCCGCTCGCTTCCAGACT 60.677 61.111 0.00 0.00 0.00 3.24
932 940 2.202676 CCGCTCGCTTCCAGACTC 60.203 66.667 0.00 0.00 0.00 3.36
933 941 2.578178 CGCTCGCTTCCAGACTCG 60.578 66.667 0.00 0.00 0.00 4.18
934 942 2.569134 GCTCGCTTCCAGACTCGT 59.431 61.111 0.00 0.00 0.00 4.18
935 943 1.515304 GCTCGCTTCCAGACTCGTC 60.515 63.158 0.00 0.00 0.00 4.20
936 944 1.137825 CTCGCTTCCAGACTCGTCC 59.862 63.158 0.00 0.00 0.00 4.79
937 945 2.182030 CGCTTCCAGACTCGTCCC 59.818 66.667 0.00 0.00 0.00 4.46
938 946 2.579738 GCTTCCAGACTCGTCCCC 59.420 66.667 0.00 0.00 0.00 4.81
939 947 2.885861 CTTCCAGACTCGTCCCCG 59.114 66.667 0.00 0.00 0.00 5.73
949 957 3.839432 CGTCCCCGCTCCTCTTCC 61.839 72.222 0.00 0.00 0.00 3.46
1028 1036 0.253630 AACCAAGCCCCAGATCCCTA 60.254 55.000 0.00 0.00 0.00 3.53
1032 1040 0.028642 AAGCCCCAGATCCCTACCAT 60.029 55.000 0.00 0.00 0.00 3.55
1033 1041 0.874594 AGCCCCAGATCCCTACCATA 59.125 55.000 0.00 0.00 0.00 2.74
1036 1050 1.132527 CCCCAGATCCCTACCATACCA 60.133 57.143 0.00 0.00 0.00 3.25
1055 1069 0.930726 ATCCCCTCTCGTCCTCTTCT 59.069 55.000 0.00 0.00 0.00 2.85
1064 1078 0.323908 CGTCCTCTTCTCCCTGACCT 60.324 60.000 0.00 0.00 0.00 3.85
1076 1103 3.576550 CTCCCTGACCTAGGCTCTAATTC 59.423 52.174 9.30 0.00 45.89 2.17
1084 1111 3.388350 CCTAGGCTCTAATTCCGTTTCCT 59.612 47.826 0.00 0.00 0.00 3.36
1086 1113 2.170817 AGGCTCTAATTCCGTTTCCTCC 59.829 50.000 0.00 0.00 0.00 4.30
1485 1518 1.519455 GGTCATCCACGGCTTCGAG 60.519 63.158 0.00 0.00 37.63 4.04
1491 1524 3.114616 CACGGCTTCGAGGTGCTG 61.115 66.667 12.37 12.37 41.02 4.41
1608 1641 2.099062 CGCGATGCTTCTTGGTGC 59.901 61.111 0.00 0.00 0.00 5.01
1612 1645 0.674581 CGATGCTTCTTGGTGCCTGA 60.675 55.000 0.00 0.00 0.00 3.86
1619 1652 1.053835 TCTTGGTGCCTGACTGGTGA 61.054 55.000 0.00 0.00 38.35 4.02
1630 1663 0.526524 GACTGGTGATTCGCTCCTCG 60.527 60.000 0.00 0.00 40.15 4.63
1631 1664 0.965866 ACTGGTGATTCGCTCCTCGA 60.966 55.000 0.00 0.00 46.88 4.04
1643 1676 1.932511 GCTCCTCGATCTCTTTGCTTG 59.067 52.381 0.00 0.00 0.00 4.01
1654 1690 5.772825 TCTCTTTGCTTGTGTTGCTAATT 57.227 34.783 0.00 0.00 0.00 1.40
1659 1695 5.782893 TTGCTTGTGTTGCTAATTTAGGT 57.217 34.783 5.61 0.00 0.00 3.08
1678 1714 5.032327 AGGTACTGGAATCGATTTTACCC 57.968 43.478 22.69 16.32 37.18 3.69
1682 1718 2.870411 CTGGAATCGATTTTACCCGTCC 59.130 50.000 12.81 6.82 0.00 4.79
1684 1720 1.862827 GAATCGATTTTACCCGTCCGG 59.137 52.381 12.81 0.00 37.81 5.14
1712 1748 8.647796 TCTGTAATATCATCCTCGTTTGGTTAT 58.352 33.333 0.00 0.00 0.00 1.89
1742 1786 0.524862 CCTGCCTGCAAGAACATGAC 59.475 55.000 0.00 0.00 34.07 3.06
1743 1787 1.241165 CTGCCTGCAAGAACATGACA 58.759 50.000 0.00 0.00 34.07 3.58
1747 1791 2.497138 CCTGCAAGAACATGACACTGA 58.503 47.619 0.00 0.00 34.07 3.41
1749 1793 3.119955 CCTGCAAGAACATGACACTGATG 60.120 47.826 0.00 0.00 34.07 3.07
1750 1794 3.742385 TGCAAGAACATGACACTGATGA 58.258 40.909 0.00 0.00 0.00 2.92
1753 1806 5.352293 TGCAAGAACATGACACTGATGATAC 59.648 40.000 0.00 0.00 0.00 2.24
1755 1808 6.128200 GCAAGAACATGACACTGATGATACAA 60.128 38.462 0.00 0.00 0.00 2.41
1756 1809 6.974932 AGAACATGACACTGATGATACAAC 57.025 37.500 0.00 0.00 0.00 3.32
1757 1810 6.466812 AGAACATGACACTGATGATACAACA 58.533 36.000 0.00 0.00 0.00 3.33
1758 1811 7.108194 AGAACATGACACTGATGATACAACAT 58.892 34.615 0.00 0.00 0.00 2.71
1759 1812 8.260114 AGAACATGACACTGATGATACAACATA 58.740 33.333 0.00 0.00 0.00 2.29
1760 1813 7.776933 ACATGACACTGATGATACAACATAC 57.223 36.000 0.00 0.00 0.00 2.39
1764 1817 6.154363 TGACACTGATGATACAACATACTGGA 59.846 38.462 0.00 0.00 0.00 3.86
1765 1818 7.129457 ACACTGATGATACAACATACTGGAT 57.871 36.000 0.00 0.00 0.00 3.41
1766 1819 6.988580 ACACTGATGATACAACATACTGGATG 59.011 38.462 0.00 0.00 41.79 3.51
1775 1828 1.959042 CATACTGGATGTGGTGGCTC 58.041 55.000 0.00 0.00 0.00 4.70
1776 1829 1.210234 CATACTGGATGTGGTGGCTCA 59.790 52.381 0.00 0.00 0.00 4.26
1777 1830 0.904649 TACTGGATGTGGTGGCTCAG 59.095 55.000 0.00 0.00 0.00 3.35
1779 1832 1.538629 TGGATGTGGTGGCTCAGGA 60.539 57.895 0.00 0.00 0.00 3.86
1781 1834 0.393537 GGATGTGGTGGCTCAGGAAG 60.394 60.000 0.00 0.00 0.00 3.46
1782 1835 0.615331 GATGTGGTGGCTCAGGAAGA 59.385 55.000 0.00 0.00 0.00 2.87
1783 1836 1.003580 GATGTGGTGGCTCAGGAAGAA 59.996 52.381 0.00 0.00 0.00 2.52
1784 1837 1.067295 TGTGGTGGCTCAGGAAGAAT 58.933 50.000 0.00 0.00 0.00 2.40
1785 1838 1.271543 TGTGGTGGCTCAGGAAGAATG 60.272 52.381 0.00 0.00 0.00 2.67
1787 1840 1.003580 TGGTGGCTCAGGAAGAATGTC 59.996 52.381 0.00 0.00 0.00 3.06
1788 1841 1.363744 GTGGCTCAGGAAGAATGTCG 58.636 55.000 0.00 0.00 0.00 4.35
1789 1842 0.391661 TGGCTCAGGAAGAATGTCGC 60.392 55.000 0.00 0.00 0.00 5.19
1790 1843 1.092345 GGCTCAGGAAGAATGTCGCC 61.092 60.000 0.00 0.00 0.00 5.54
1793 1846 2.704572 CTCAGGAAGAATGTCGCCTTT 58.295 47.619 0.00 0.00 0.00 3.11
1795 1848 1.135575 CAGGAAGAATGTCGCCTTTGC 60.136 52.381 0.00 0.00 0.00 3.68
1797 1850 1.135575 GGAAGAATGTCGCCTTTGCTG 60.136 52.381 0.00 0.00 34.43 4.41
1799 1852 2.119801 AGAATGTCGCCTTTGCTGAT 57.880 45.000 0.00 0.00 34.43 2.90
1800 1853 2.012673 AGAATGTCGCCTTTGCTGATC 58.987 47.619 0.00 0.00 34.43 2.92
1801 1854 2.012673 GAATGTCGCCTTTGCTGATCT 58.987 47.619 0.00 0.00 34.43 2.75
1802 1855 1.376543 ATGTCGCCTTTGCTGATCTG 58.623 50.000 0.00 0.00 34.43 2.90
1803 1856 1.300971 TGTCGCCTTTGCTGATCTGC 61.301 55.000 16.98 16.98 34.43 4.26
1804 1857 1.003476 TCGCCTTTGCTGATCTGCA 60.003 52.632 21.87 21.87 41.65 4.41
1806 1859 1.807886 GCCTTTGCTGATCTGCAGG 59.192 57.895 23.90 22.62 45.03 4.85
1807 1860 1.807886 CCTTTGCTGATCTGCAGGC 59.192 57.895 23.90 9.90 45.03 4.85
1808 1861 0.680280 CCTTTGCTGATCTGCAGGCT 60.680 55.000 23.90 0.98 45.03 4.58
1809 1862 1.174783 CTTTGCTGATCTGCAGGCTT 58.825 50.000 23.90 0.00 45.03 4.35
1824 1877 3.430779 GCTTTGCCATTCCTCTTGC 57.569 52.632 0.00 0.00 0.00 4.01
1825 1878 0.893447 GCTTTGCCATTCCTCTTGCT 59.107 50.000 0.00 0.00 0.00 3.91
1826 1879 1.403780 GCTTTGCCATTCCTCTTGCTG 60.404 52.381 0.00 0.00 0.00 4.41
1827 1880 0.604578 TTTGCCATTCCTCTTGCTGC 59.395 50.000 0.00 0.00 0.00 5.25
1828 1881 0.251474 TTGCCATTCCTCTTGCTGCT 60.251 50.000 0.00 0.00 0.00 4.24
1829 1882 0.251474 TGCCATTCCTCTTGCTGCTT 60.251 50.000 0.00 0.00 0.00 3.91
1830 1883 0.172803 GCCATTCCTCTTGCTGCTTG 59.827 55.000 0.00 0.00 0.00 4.01
1831 1884 0.172803 CCATTCCTCTTGCTGCTTGC 59.827 55.000 0.00 0.00 43.25 4.01
1832 1885 1.174783 CATTCCTCTTGCTGCTTGCT 58.825 50.000 0.00 0.00 43.37 3.91
1833 1886 2.362736 CATTCCTCTTGCTGCTTGCTA 58.637 47.619 0.00 0.00 43.37 3.49
1834 1887 1.813513 TTCCTCTTGCTGCTTGCTAC 58.186 50.000 0.00 0.00 43.37 3.58
1835 1888 0.979665 TCCTCTTGCTGCTTGCTACT 59.020 50.000 0.00 0.00 43.37 2.57
1836 1889 1.349026 TCCTCTTGCTGCTTGCTACTT 59.651 47.619 0.00 0.00 43.37 2.24
1837 1890 2.567169 TCCTCTTGCTGCTTGCTACTTA 59.433 45.455 0.00 0.00 43.37 2.24
1838 1891 3.198635 TCCTCTTGCTGCTTGCTACTTAT 59.801 43.478 0.00 0.00 43.37 1.73
1839 1892 4.405680 TCCTCTTGCTGCTTGCTACTTATA 59.594 41.667 0.00 0.00 43.37 0.98
1840 1893 5.104941 TCCTCTTGCTGCTTGCTACTTATAA 60.105 40.000 0.00 0.00 43.37 0.98
1841 1894 5.762218 CCTCTTGCTGCTTGCTACTTATAAT 59.238 40.000 0.00 0.00 43.37 1.28
1842 1895 6.261826 CCTCTTGCTGCTTGCTACTTATAATT 59.738 38.462 0.00 0.00 43.37 1.40
1843 1896 7.201767 CCTCTTGCTGCTTGCTACTTATAATTT 60.202 37.037 0.00 0.00 43.37 1.82
1844 1897 7.475015 TCTTGCTGCTTGCTACTTATAATTTG 58.525 34.615 0.00 0.00 43.37 2.32
1845 1898 5.581605 TGCTGCTTGCTACTTATAATTTGC 58.418 37.500 0.00 2.97 43.37 3.68
1846 1899 4.672413 GCTGCTTGCTACTTATAATTTGCG 59.328 41.667 5.16 0.00 38.95 4.85
1847 1900 5.504010 GCTGCTTGCTACTTATAATTTGCGA 60.504 40.000 5.16 2.90 38.95 5.10
1848 1901 6.618287 TGCTTGCTACTTATAATTTGCGAT 57.382 33.333 5.16 0.00 0.00 4.58
1849 1902 6.429624 TGCTTGCTACTTATAATTTGCGATG 58.570 36.000 5.16 0.59 0.00 3.84
1850 1903 6.038161 TGCTTGCTACTTATAATTTGCGATGT 59.962 34.615 5.16 0.00 0.00 3.06
1851 1904 6.912591 GCTTGCTACTTATAATTTGCGATGTT 59.087 34.615 5.16 0.00 0.00 2.71
1852 1905 7.432252 GCTTGCTACTTATAATTTGCGATGTTT 59.568 33.333 5.16 0.00 0.00 2.83
1853 1906 8.613613 TTGCTACTTATAATTTGCGATGTTTG 57.386 30.769 5.16 0.00 0.00 2.93
1854 1907 7.980062 TGCTACTTATAATTTGCGATGTTTGA 58.020 30.769 5.16 0.00 0.00 2.69
1855 1908 8.454894 TGCTACTTATAATTTGCGATGTTTGAA 58.545 29.630 5.16 0.00 0.00 2.69
1856 1909 8.734030 GCTACTTATAATTTGCGATGTTTGAAC 58.266 33.333 0.00 0.00 0.00 3.18
1857 1910 7.719689 ACTTATAATTTGCGATGTTTGAACG 57.280 32.000 0.00 0.00 0.00 3.95
1858 1911 7.523219 ACTTATAATTTGCGATGTTTGAACGA 58.477 30.769 0.00 0.00 0.00 3.85
1859 1912 7.692291 ACTTATAATTTGCGATGTTTGAACGAG 59.308 33.333 0.00 0.00 0.00 4.18
1860 1913 2.031037 TTTGCGATGTTTGAACGAGC 57.969 45.000 0.00 2.55 0.00 5.03
1861 1914 0.110867 TTGCGATGTTTGAACGAGCG 60.111 50.000 0.00 0.00 0.00 5.03
1862 1915 0.941936 TGCGATGTTTGAACGAGCGA 60.942 50.000 0.00 0.00 0.00 4.93
1863 1916 0.162933 GCGATGTTTGAACGAGCGAA 59.837 50.000 0.00 0.00 0.00 4.70
1864 1917 1.201921 GCGATGTTTGAACGAGCGAAT 60.202 47.619 0.00 0.00 0.00 3.34
1865 1918 2.421523 CGATGTTTGAACGAGCGAATG 58.578 47.619 0.00 0.00 0.00 2.67
1866 1919 2.774007 GATGTTTGAACGAGCGAATGG 58.226 47.619 0.00 0.00 0.00 3.16
1867 1920 1.872388 TGTTTGAACGAGCGAATGGA 58.128 45.000 0.00 0.00 0.00 3.41
1868 1921 2.214347 TGTTTGAACGAGCGAATGGAA 58.786 42.857 0.00 0.00 0.00 3.53
1869 1922 2.811431 TGTTTGAACGAGCGAATGGAAT 59.189 40.909 0.00 0.00 0.00 3.01
1870 1923 3.252215 TGTTTGAACGAGCGAATGGAATT 59.748 39.130 0.00 0.00 40.93 2.17
1871 1924 4.226761 GTTTGAACGAGCGAATGGAATTT 58.773 39.130 0.00 0.00 36.07 1.82
1872 1925 5.049336 TGTTTGAACGAGCGAATGGAATTTA 60.049 36.000 0.00 0.00 36.07 1.40
1873 1926 4.593597 TGAACGAGCGAATGGAATTTAC 57.406 40.909 0.00 0.00 36.07 2.01
1874 1927 3.061563 TGAACGAGCGAATGGAATTTACG 59.938 43.478 0.00 0.00 36.07 3.18
1875 1928 2.613691 ACGAGCGAATGGAATTTACGT 58.386 42.857 0.00 0.00 36.07 3.57
1876 1929 2.347452 ACGAGCGAATGGAATTTACGTG 59.653 45.455 0.00 0.00 36.07 4.49
1877 1930 2.347452 CGAGCGAATGGAATTTACGTGT 59.653 45.455 0.00 0.00 36.07 4.49
1878 1931 3.181524 CGAGCGAATGGAATTTACGTGTT 60.182 43.478 0.00 0.00 36.07 3.32
1879 1932 4.668177 CGAGCGAATGGAATTTACGTGTTT 60.668 41.667 0.00 0.00 36.07 2.83
1880 1933 4.719040 AGCGAATGGAATTTACGTGTTTC 58.281 39.130 0.00 0.00 36.07 2.78
1881 1934 4.214545 AGCGAATGGAATTTACGTGTTTCA 59.785 37.500 0.00 0.00 36.07 2.69
1882 1935 4.553429 GCGAATGGAATTTACGTGTTTCAG 59.447 41.667 0.00 0.00 36.07 3.02
1883 1936 4.553429 CGAATGGAATTTACGTGTTTCAGC 59.447 41.667 0.00 0.00 36.07 4.26
1884 1937 5.616866 CGAATGGAATTTACGTGTTTCAGCT 60.617 40.000 0.00 0.00 36.07 4.24
1885 1938 4.481930 TGGAATTTACGTGTTTCAGCTG 57.518 40.909 7.63 7.63 0.00 4.24
1886 1939 3.880490 TGGAATTTACGTGTTTCAGCTGT 59.120 39.130 14.67 0.00 0.00 4.40
1887 1940 4.219033 GGAATTTACGTGTTTCAGCTGTG 58.781 43.478 14.67 0.76 0.00 3.66
1888 1941 4.024387 GGAATTTACGTGTTTCAGCTGTGA 60.024 41.667 14.67 0.54 0.00 3.58
1889 1942 4.732285 ATTTACGTGTTTCAGCTGTGAG 57.268 40.909 14.67 3.46 32.98 3.51
1890 1943 3.446310 TTACGTGTTTCAGCTGTGAGA 57.554 42.857 14.67 0.00 32.98 3.27
1891 1944 2.533266 ACGTGTTTCAGCTGTGAGAT 57.467 45.000 14.67 0.00 32.98 2.75
1892 1945 2.138320 ACGTGTTTCAGCTGTGAGATG 58.862 47.619 14.67 9.81 32.98 2.90
1893 1946 1.462283 CGTGTTTCAGCTGTGAGATGG 59.538 52.381 14.67 0.00 31.42 3.51
1894 1947 1.198637 GTGTTTCAGCTGTGAGATGGC 59.801 52.381 14.67 0.00 31.42 4.40
1929 1982 9.303116 TGAATTTAGTTGCCTGAATTTTACCTA 57.697 29.630 0.00 0.00 37.11 3.08
1937 1993 4.142381 GCCTGAATTTTACCTACCTGCAAG 60.142 45.833 0.00 0.00 0.00 4.01
1945 2001 5.435686 TTACCTACCTGCAAGAACATGAT 57.564 39.130 0.00 0.00 34.07 2.45
1947 2003 5.028549 ACCTACCTGCAAGAACATGATAG 57.971 43.478 0.00 0.00 34.07 2.08
1956 2012 4.034510 GCAAGAACATGATAGTGTACTGGC 59.965 45.833 0.00 0.00 0.00 4.85
1961 2017 8.657387 AGAACATGATAGTGTACTGGCTATAT 57.343 34.615 0.00 0.00 0.00 0.86
1975 2031 9.804758 GTACTGGCTATATTGACTGATTATACC 57.195 37.037 4.00 0.00 0.00 2.73
1976 2032 8.671987 ACTGGCTATATTGACTGATTATACCT 57.328 34.615 4.00 0.00 0.00 3.08
1977 2033 8.754080 ACTGGCTATATTGACTGATTATACCTC 58.246 37.037 4.00 0.00 0.00 3.85
1978 2034 7.772166 TGGCTATATTGACTGATTATACCTCG 58.228 38.462 0.00 0.00 0.00 4.63
1979 2035 7.614192 TGGCTATATTGACTGATTATACCTCGA 59.386 37.037 0.00 0.00 0.00 4.04
1980 2036 8.132362 GGCTATATTGACTGATTATACCTCGAG 58.868 40.741 5.13 5.13 0.00 4.04
1981 2037 8.679100 GCTATATTGACTGATTATACCTCGAGT 58.321 37.037 12.31 2.17 0.00 4.18
1982 2038 9.995957 CTATATTGACTGATTATACCTCGAGTG 57.004 37.037 12.31 5.52 0.00 3.51
1983 2039 6.716934 ATTGACTGATTATACCTCGAGTGT 57.283 37.500 12.31 11.37 0.00 3.55
1984 2040 6.525578 TTGACTGATTATACCTCGAGTGTT 57.474 37.500 12.31 0.00 0.00 3.32
1985 2041 6.525578 TGACTGATTATACCTCGAGTGTTT 57.474 37.500 12.31 6.92 0.00 2.83
1986 2042 6.330278 TGACTGATTATACCTCGAGTGTTTG 58.670 40.000 12.31 0.00 0.00 2.93
1987 2043 5.661458 ACTGATTATACCTCGAGTGTTTGG 58.339 41.667 12.31 0.00 0.00 3.28
1988 2044 5.187186 ACTGATTATACCTCGAGTGTTTGGT 59.813 40.000 12.31 4.23 36.66 3.67
1989 2045 6.045072 TGATTATACCTCGAGTGTTTGGTT 57.955 37.500 12.31 0.00 34.33 3.67
1990 2046 7.093640 ACTGATTATACCTCGAGTGTTTGGTTA 60.094 37.037 12.31 0.00 34.33 2.85
1991 2047 7.613585 TGATTATACCTCGAGTGTTTGGTTAA 58.386 34.615 12.31 4.52 34.33 2.01
1992 2048 8.095792 TGATTATACCTCGAGTGTTTGGTTAAA 58.904 33.333 12.31 0.72 34.33 1.52
1993 2049 9.106070 GATTATACCTCGAGTGTTTGGTTAAAT 57.894 33.333 12.31 5.31 34.33 1.40
1994 2050 6.737254 ATACCTCGAGTGTTTGGTTAAATG 57.263 37.500 12.31 0.00 34.33 2.32
1995 2051 3.252458 ACCTCGAGTGTTTGGTTAAATGC 59.748 43.478 12.31 0.00 0.00 3.56
1996 2052 3.502211 CCTCGAGTGTTTGGTTAAATGCT 59.498 43.478 12.31 0.00 0.00 3.79
1997 2053 4.023193 CCTCGAGTGTTTGGTTAAATGCTT 60.023 41.667 12.31 0.00 0.00 3.91
1998 2054 5.103290 TCGAGTGTTTGGTTAAATGCTTC 57.897 39.130 0.00 0.00 0.00 3.86
1999 2055 3.906008 CGAGTGTTTGGTTAAATGCTTCG 59.094 43.478 0.00 0.00 0.00 3.79
2000 2056 3.638484 AGTGTTTGGTTAAATGCTTCGC 58.362 40.909 0.00 0.00 0.00 4.70
2001 2057 3.317993 AGTGTTTGGTTAAATGCTTCGCT 59.682 39.130 0.00 0.00 0.00 4.93
2002 2058 3.425193 GTGTTTGGTTAAATGCTTCGCTG 59.575 43.478 0.00 0.00 0.00 5.18
2003 2059 2.986479 GTTTGGTTAAATGCTTCGCTGG 59.014 45.455 0.00 0.00 0.00 4.85
2004 2060 0.525761 TGGTTAAATGCTTCGCTGGC 59.474 50.000 0.00 0.00 0.00 4.85
2005 2061 0.811281 GGTTAAATGCTTCGCTGGCT 59.189 50.000 0.00 0.00 0.00 4.75
2006 2062 1.468054 GGTTAAATGCTTCGCTGGCTG 60.468 52.381 0.00 0.00 0.00 4.85
2007 2063 1.468520 GTTAAATGCTTCGCTGGCTGA 59.531 47.619 0.00 0.00 0.00 4.26
2008 2064 2.042686 TAAATGCTTCGCTGGCTGAT 57.957 45.000 0.00 0.00 0.00 2.90
2009 2065 0.454600 AAATGCTTCGCTGGCTGATG 59.545 50.000 0.00 0.00 0.00 3.07
2010 2066 0.393402 AATGCTTCGCTGGCTGATGA 60.393 50.000 0.00 0.00 0.00 2.92
2011 2067 0.179026 ATGCTTCGCTGGCTGATGAT 60.179 50.000 0.00 0.00 0.00 2.45
2012 2068 0.465287 TGCTTCGCTGGCTGATGATA 59.535 50.000 0.00 0.00 0.00 2.15
2013 2069 0.864455 GCTTCGCTGGCTGATGATAC 59.136 55.000 0.00 0.00 0.00 2.24
2014 2070 1.539929 GCTTCGCTGGCTGATGATACT 60.540 52.381 0.00 0.00 0.00 2.12
2015 2071 2.133553 CTTCGCTGGCTGATGATACTG 58.866 52.381 0.00 0.00 0.00 2.74
2016 2072 0.249615 TCGCTGGCTGATGATACTGC 60.250 55.000 0.00 0.00 0.00 4.40
2017 2073 0.531311 CGCTGGCTGATGATACTGCA 60.531 55.000 0.00 0.00 36.66 4.41
2018 2074 1.671979 GCTGGCTGATGATACTGCAA 58.328 50.000 0.00 0.00 36.66 4.08
2019 2075 1.602851 GCTGGCTGATGATACTGCAAG 59.397 52.381 0.00 0.00 38.32 4.01
2036 2092 5.181690 TGCAAGTGTCTGGTTAATTGTTC 57.818 39.130 0.00 0.00 0.00 3.18
2037 2093 4.642437 TGCAAGTGTCTGGTTAATTGTTCA 59.358 37.500 0.00 0.00 0.00 3.18
2038 2094 5.301551 TGCAAGTGTCTGGTTAATTGTTCAT 59.698 36.000 0.00 0.00 0.00 2.57
2039 2095 5.630680 GCAAGTGTCTGGTTAATTGTTCATG 59.369 40.000 0.00 0.00 0.00 3.07
2040 2096 5.376854 AGTGTCTGGTTAATTGTTCATGC 57.623 39.130 0.00 0.00 0.00 4.06
2041 2097 4.218417 AGTGTCTGGTTAATTGTTCATGCC 59.782 41.667 0.00 0.00 0.00 4.40
2042 2098 4.218417 GTGTCTGGTTAATTGTTCATGCCT 59.782 41.667 0.00 0.00 0.00 4.75
2043 2099 4.832266 TGTCTGGTTAATTGTTCATGCCTT 59.168 37.500 0.00 0.00 0.00 4.35
2044 2100 5.048083 TGTCTGGTTAATTGTTCATGCCTTC 60.048 40.000 0.00 0.00 0.00 3.46
2045 2101 5.183904 GTCTGGTTAATTGTTCATGCCTTCT 59.816 40.000 0.00 0.00 0.00 2.85
2046 2102 5.774690 TCTGGTTAATTGTTCATGCCTTCTT 59.225 36.000 0.00 0.00 0.00 2.52
2047 2103 6.267471 TCTGGTTAATTGTTCATGCCTTCTTT 59.733 34.615 0.00 0.00 0.00 2.52
2048 2104 6.454795 TGGTTAATTGTTCATGCCTTCTTTC 58.545 36.000 0.00 0.00 0.00 2.62
2049 2105 5.869344 GGTTAATTGTTCATGCCTTCTTTCC 59.131 40.000 0.00 0.00 0.00 3.13
2050 2106 4.541973 AATTGTTCATGCCTTCTTTCCC 57.458 40.909 0.00 0.00 0.00 3.97
2051 2107 1.533625 TGTTCATGCCTTCTTTCCCG 58.466 50.000 0.00 0.00 0.00 5.14
2052 2108 1.073125 TGTTCATGCCTTCTTTCCCGA 59.927 47.619 0.00 0.00 0.00 5.14
2053 2109 2.290896 TGTTCATGCCTTCTTTCCCGAT 60.291 45.455 0.00 0.00 0.00 4.18
2058 2114 0.392998 GCCTTCTTTCCCGATCTGCA 60.393 55.000 0.00 0.00 0.00 4.41
2061 2117 0.392998 TTCTTTCCCGATCTGCAGGC 60.393 55.000 15.13 5.63 0.00 4.85
2064 2120 0.038166 TTTCCCGATCTGCAGGCTTT 59.962 50.000 15.13 0.00 0.00 3.51
2081 2137 0.039256 TTTGCCATTCGTCTTGCTGC 60.039 50.000 0.00 0.00 0.00 5.25
2086 2142 0.520404 CATTCGTCTTGCTGCTTGCT 59.480 50.000 0.00 0.00 43.37 3.91
2092 2148 1.876156 GTCTTGCTGCTTGCTACTTGT 59.124 47.619 0.00 0.00 43.37 3.16
2095 2151 4.154918 GTCTTGCTGCTTGCTACTTGTAAT 59.845 41.667 0.00 0.00 43.37 1.89
2098 2154 4.797471 TGCTGCTTGCTACTTGTAATTTG 58.203 39.130 0.00 0.00 43.37 2.32
2099 2155 3.609807 GCTGCTTGCTACTTGTAATTTGC 59.390 43.478 0.00 0.00 38.95 3.68
2109 2165 6.580791 GCTACTTGTAATTTGCGATGTTTGAA 59.419 34.615 0.00 0.00 0.00 2.69
2114 2170 2.031037 TTTGCGATGTTTGAACGAGC 57.969 45.000 0.00 2.55 0.00 5.03
2120 2176 2.774007 GATGTTTGAACGAGCGAATGG 58.226 47.619 0.00 0.00 0.00 3.16
2122 2178 2.214347 TGTTTGAACGAGCGAATGGAA 58.786 42.857 0.00 0.00 0.00 3.53
2123 2179 2.811431 TGTTTGAACGAGCGAATGGAAT 59.189 40.909 0.00 0.00 0.00 3.01
2124 2180 3.163594 GTTTGAACGAGCGAATGGAATG 58.836 45.455 0.00 0.00 0.00 2.67
2125 2181 0.726827 TGAACGAGCGAATGGAATGC 59.273 50.000 0.00 0.00 0.00 3.56
2126 2182 0.726827 GAACGAGCGAATGGAATGCA 59.273 50.000 0.00 0.00 0.00 3.96
2127 2183 1.130373 GAACGAGCGAATGGAATGCAA 59.870 47.619 0.00 0.00 0.00 4.08
2128 2184 0.729116 ACGAGCGAATGGAATGCAAG 59.271 50.000 0.00 0.00 0.00 4.01
2129 2185 1.009078 CGAGCGAATGGAATGCAAGA 58.991 50.000 0.00 0.00 0.00 3.02
2130 2186 1.398041 CGAGCGAATGGAATGCAAGAA 59.602 47.619 0.00 0.00 0.00 2.52
2131 2187 2.032550 CGAGCGAATGGAATGCAAGAAT 59.967 45.455 0.00 0.00 0.00 2.40
2132 2188 3.488047 CGAGCGAATGGAATGCAAGAATT 60.488 43.478 0.00 0.00 0.00 2.17
2133 2189 4.427312 GAGCGAATGGAATGCAAGAATTT 58.573 39.130 0.00 0.00 0.00 1.82
2134 2190 4.427312 AGCGAATGGAATGCAAGAATTTC 58.573 39.130 0.00 0.00 0.00 2.17
2135 2191 4.159135 AGCGAATGGAATGCAAGAATTTCT 59.841 37.500 0.00 0.00 0.00 2.52
2136 2192 4.266976 GCGAATGGAATGCAAGAATTTCTG 59.733 41.667 0.00 0.00 0.00 3.02
2137 2193 5.404946 CGAATGGAATGCAAGAATTTCTGT 58.595 37.500 0.00 0.00 0.00 3.41
2138 2194 5.514204 CGAATGGAATGCAAGAATTTCTGTC 59.486 40.000 0.00 0.00 0.00 3.51
2139 2195 5.988310 ATGGAATGCAAGAATTTCTGTCA 57.012 34.783 0.00 1.85 0.00 3.58
2140 2196 5.988310 TGGAATGCAAGAATTTCTGTCAT 57.012 34.783 0.00 4.09 0.00 3.06
2141 2197 5.957798 TGGAATGCAAGAATTTCTGTCATC 58.042 37.500 0.00 0.00 0.00 2.92
2142 2198 5.477637 TGGAATGCAAGAATTTCTGTCATCA 59.522 36.000 0.00 0.54 0.00 3.07
2143 2199 6.034591 GGAATGCAAGAATTTCTGTCATCAG 58.965 40.000 0.00 0.00 42.54 2.90
2144 2200 6.349944 GGAATGCAAGAATTTCTGTCATCAGT 60.350 38.462 0.00 0.00 41.91 3.41
2145 2201 7.148188 GGAATGCAAGAATTTCTGTCATCAGTA 60.148 37.037 0.00 0.00 41.91 2.74
2146 2202 6.732531 TGCAAGAATTTCTGTCATCAGTAG 57.267 37.500 0.00 0.00 41.91 2.57
2147 2203 6.233434 TGCAAGAATTTCTGTCATCAGTAGT 58.767 36.000 0.00 0.00 41.91 2.73
2148 2204 6.148315 TGCAAGAATTTCTGTCATCAGTAGTG 59.852 38.462 0.00 0.00 41.91 2.74
2149 2205 6.402983 GCAAGAATTTCTGTCATCAGTAGTGG 60.403 42.308 0.00 0.00 41.91 4.00
2150 2206 6.611613 AGAATTTCTGTCATCAGTAGTGGA 57.388 37.500 0.00 0.00 41.91 4.02
2151 2207 7.009179 AGAATTTCTGTCATCAGTAGTGGAA 57.991 36.000 0.00 0.00 41.91 3.53
2152 2208 7.628234 AGAATTTCTGTCATCAGTAGTGGAAT 58.372 34.615 0.00 0.00 41.91 3.01
2153 2209 8.105829 AGAATTTCTGTCATCAGTAGTGGAATT 58.894 33.333 0.00 0.00 41.91 2.17
2154 2210 8.641498 AATTTCTGTCATCAGTAGTGGAATTT 57.359 30.769 0.00 0.00 41.91 1.82
2155 2211 9.739276 AATTTCTGTCATCAGTAGTGGAATTTA 57.261 29.630 0.00 0.00 41.91 1.40
2156 2212 8.547967 TTTCTGTCATCAGTAGTGGAATTTAC 57.452 34.615 0.00 0.00 41.91 2.01
2157 2213 7.239763 TCTGTCATCAGTAGTGGAATTTACA 57.760 36.000 0.00 0.00 41.91 2.41
2158 2214 7.097192 TCTGTCATCAGTAGTGGAATTTACAC 58.903 38.462 3.38 3.38 41.91 2.90
2159 2215 5.867174 TGTCATCAGTAGTGGAATTTACACG 59.133 40.000 6.11 0.00 43.41 4.49
2160 2216 6.097356 GTCATCAGTAGTGGAATTTACACGA 58.903 40.000 6.11 0.00 43.41 4.35
2161 2217 6.757010 GTCATCAGTAGTGGAATTTACACGAT 59.243 38.462 6.11 0.79 43.41 3.73
2162 2218 7.277981 GTCATCAGTAGTGGAATTTACACGATT 59.722 37.037 6.11 0.00 43.41 3.34
2163 2219 7.491372 TCATCAGTAGTGGAATTTACACGATTC 59.509 37.037 6.11 0.00 43.41 2.52
2164 2220 6.693466 TCAGTAGTGGAATTTACACGATTCA 58.307 36.000 6.11 0.00 43.41 2.57
2165 2221 6.811665 TCAGTAGTGGAATTTACACGATTCAG 59.188 38.462 6.11 0.00 43.41 3.02
2166 2222 4.946784 AGTGGAATTTACACGATTCAGC 57.053 40.909 6.11 0.00 43.41 4.26
2167 2223 4.579869 AGTGGAATTTACACGATTCAGCT 58.420 39.130 6.11 0.00 43.41 4.24
2168 2224 4.393062 AGTGGAATTTACACGATTCAGCTG 59.607 41.667 7.63 7.63 43.41 4.24
2169 2225 4.154195 GTGGAATTTACACGATTCAGCTGT 59.846 41.667 14.67 0.00 35.66 4.40
2170 2226 4.154015 TGGAATTTACACGATTCAGCTGTG 59.846 41.667 14.67 6.67 35.66 3.66
2171 2227 4.391830 GGAATTTACACGATTCAGCTGTGA 59.608 41.667 14.67 4.19 35.66 3.58
2172 2228 5.446473 GGAATTTACACGATTCAGCTGTGAG 60.446 44.000 14.67 6.65 35.66 3.51
2173 2229 3.934457 TTACACGATTCAGCTGTGAGA 57.066 42.857 14.67 0.00 37.08 3.27
2174 2230 2.360553 ACACGATTCAGCTGTGAGAG 57.639 50.000 14.67 5.58 37.08 3.20
2175 2231 1.067283 ACACGATTCAGCTGTGAGAGG 60.067 52.381 14.67 3.73 37.08 3.69
2176 2232 1.067283 CACGATTCAGCTGTGAGAGGT 60.067 52.381 14.67 3.00 35.66 3.85
2177 2233 1.620819 ACGATTCAGCTGTGAGAGGTT 59.379 47.619 14.67 0.00 32.98 3.50
2178 2234 2.037772 ACGATTCAGCTGTGAGAGGTTT 59.962 45.455 14.67 0.00 32.98 3.27
2179 2235 3.070018 CGATTCAGCTGTGAGAGGTTTT 58.930 45.455 14.67 0.00 32.98 2.43
2180 2236 3.120408 CGATTCAGCTGTGAGAGGTTTTG 60.120 47.826 14.67 0.00 32.98 2.44
2181 2237 3.281727 TTCAGCTGTGAGAGGTTTTGT 57.718 42.857 14.67 0.00 32.98 2.83
2182 2238 2.838736 TCAGCTGTGAGAGGTTTTGTC 58.161 47.619 14.67 0.00 0.00 3.18
2183 2239 2.170397 TCAGCTGTGAGAGGTTTTGTCA 59.830 45.455 14.67 0.00 0.00 3.58
2185 2241 1.604278 GCTGTGAGAGGTTTTGTCACC 59.396 52.381 2.57 0.00 46.61 4.02
2194 2250 4.670896 AGGTTTTGTCACCTGAATTTGG 57.329 40.909 0.00 0.00 46.22 3.28
2195 2251 4.030216 AGGTTTTGTCACCTGAATTTGGT 58.970 39.130 0.00 0.00 46.22 3.67
2196 2252 4.469586 AGGTTTTGTCACCTGAATTTGGTT 59.530 37.500 1.86 0.00 46.22 3.67
2197 2253 4.570369 GGTTTTGTCACCTGAATTTGGTTG 59.430 41.667 1.86 0.16 35.28 3.77
2198 2254 3.451141 TTGTCACCTGAATTTGGTTGC 57.549 42.857 1.86 0.27 35.28 4.17
2199 2255 1.686052 TGTCACCTGAATTTGGTTGCC 59.314 47.619 1.86 0.00 35.28 4.52
2200 2256 1.963515 GTCACCTGAATTTGGTTGCCT 59.036 47.619 1.86 0.00 35.28 4.75
2201 2257 1.962807 TCACCTGAATTTGGTTGCCTG 59.037 47.619 1.86 0.00 35.28 4.85
2202 2258 1.962807 CACCTGAATTTGGTTGCCTGA 59.037 47.619 1.86 0.00 35.28 3.86
2203 2259 2.364970 CACCTGAATTTGGTTGCCTGAA 59.635 45.455 1.86 0.00 35.28 3.02
2204 2260 3.007182 CACCTGAATTTGGTTGCCTGAAT 59.993 43.478 1.86 0.00 35.28 2.57
2205 2261 4.220382 CACCTGAATTTGGTTGCCTGAATA 59.780 41.667 1.86 0.00 35.28 1.75
2206 2262 5.025453 ACCTGAATTTGGTTGCCTGAATAT 58.975 37.500 0.00 0.00 33.34 1.28
2207 2263 6.096705 CACCTGAATTTGGTTGCCTGAATATA 59.903 38.462 1.86 0.00 35.28 0.86
2208 2264 6.667414 ACCTGAATTTGGTTGCCTGAATATAA 59.333 34.615 0.00 0.00 33.34 0.98
2209 2265 6.980397 CCTGAATTTGGTTGCCTGAATATAAC 59.020 38.462 0.00 0.00 0.00 1.89
2210 2266 7.147846 CCTGAATTTGGTTGCCTGAATATAACT 60.148 37.037 0.00 0.00 0.00 2.24
2211 2267 8.815565 TGAATTTGGTTGCCTGAATATAACTA 57.184 30.769 0.00 0.00 0.00 2.24
2212 2268 8.682710 TGAATTTGGTTGCCTGAATATAACTAC 58.317 33.333 0.00 0.00 0.00 2.73
2213 2269 7.582667 ATTTGGTTGCCTGAATATAACTACC 57.417 36.000 0.00 0.00 0.00 3.18
2214 2270 5.968676 TGGTTGCCTGAATATAACTACCT 57.031 39.130 0.00 0.00 0.00 3.08
2215 2271 5.680619 TGGTTGCCTGAATATAACTACCTG 58.319 41.667 0.00 0.00 0.00 4.00
2216 2272 4.515567 GGTTGCCTGAATATAACTACCTGC 59.484 45.833 0.00 0.00 0.00 4.85
2217 2273 4.351874 TGCCTGAATATAACTACCTGCC 57.648 45.455 0.00 0.00 0.00 4.85
2218 2274 3.973973 TGCCTGAATATAACTACCTGCCT 59.026 43.478 0.00 0.00 0.00 4.75
2219 2275 4.202357 TGCCTGAATATAACTACCTGCCTG 60.202 45.833 0.00 0.00 0.00 4.85
2220 2276 4.319177 CCTGAATATAACTACCTGCCTGC 58.681 47.826 0.00 0.00 0.00 4.85
2221 2277 4.202357 CCTGAATATAACTACCTGCCTGCA 60.202 45.833 0.00 0.00 0.00 4.41
2222 2278 5.366482 TGAATATAACTACCTGCCTGCAA 57.634 39.130 0.00 0.00 0.00 4.08
2223 2279 5.368145 TGAATATAACTACCTGCCTGCAAG 58.632 41.667 0.00 0.00 0.00 4.01
2224 2280 5.130311 TGAATATAACTACCTGCCTGCAAGA 59.870 40.000 0.00 0.00 34.07 3.02
2225 2281 5.630415 ATATAACTACCTGCCTGCAAGAA 57.370 39.130 0.00 0.00 34.07 2.52
2226 2282 1.897560 AACTACCTGCCTGCAAGAAC 58.102 50.000 0.00 0.00 34.07 3.01
2227 2283 0.764890 ACTACCTGCCTGCAAGAACA 59.235 50.000 0.00 0.00 34.07 3.18
2228 2284 1.352352 ACTACCTGCCTGCAAGAACAT 59.648 47.619 0.00 0.00 34.07 2.71
2229 2285 1.741706 CTACCTGCCTGCAAGAACATG 59.258 52.381 0.00 0.00 34.07 3.21
2230 2286 0.111061 ACCTGCCTGCAAGAACATGA 59.889 50.000 0.00 0.00 34.07 3.07
2231 2287 1.272313 ACCTGCCTGCAAGAACATGAT 60.272 47.619 0.00 0.00 34.07 2.45
2232 2288 2.025981 ACCTGCCTGCAAGAACATGATA 60.026 45.455 0.00 0.00 34.07 2.15
2233 2289 2.357009 CCTGCCTGCAAGAACATGATAC 59.643 50.000 0.00 0.00 34.07 2.24
2234 2290 3.011818 CTGCCTGCAAGAACATGATACA 58.988 45.455 0.00 0.00 34.07 2.29
2235 2291 3.011818 TGCCTGCAAGAACATGATACAG 58.988 45.455 0.00 0.00 34.07 2.74
2236 2292 2.357009 GCCTGCAAGAACATGATACAGG 59.643 50.000 0.00 8.47 44.80 4.00
2237 2293 3.614092 CCTGCAAGAACATGATACAGGT 58.386 45.455 0.00 0.00 38.69 4.00
2238 2294 3.376234 CCTGCAAGAACATGATACAGGTG 59.624 47.826 0.00 0.00 38.69 4.00
2239 2295 4.005650 CTGCAAGAACATGATACAGGTGT 58.994 43.478 0.00 0.00 34.07 4.16
2240 2296 3.752747 TGCAAGAACATGATACAGGTGTG 59.247 43.478 0.00 0.00 0.00 3.82
2241 2297 3.127548 GCAAGAACATGATACAGGTGTGG 59.872 47.826 0.00 0.00 0.00 4.17
2242 2298 4.326826 CAAGAACATGATACAGGTGTGGT 58.673 43.478 0.00 0.00 0.00 4.16
2243 2299 3.942829 AGAACATGATACAGGTGTGGTG 58.057 45.455 0.00 0.00 0.00 4.17
2244 2300 2.787473 ACATGATACAGGTGTGGTGG 57.213 50.000 0.00 0.00 0.00 4.61
2245 2301 1.985159 ACATGATACAGGTGTGGTGGT 59.015 47.619 0.00 0.00 0.00 4.16
2246 2302 2.027192 ACATGATACAGGTGTGGTGGTC 60.027 50.000 0.00 0.00 0.00 4.02
2247 2303 1.723288 TGATACAGGTGTGGTGGTCA 58.277 50.000 0.00 0.00 0.00 4.02
2248 2304 1.346395 TGATACAGGTGTGGTGGTCAC 59.654 52.381 0.00 0.00 46.23 3.67
2249 2305 1.623811 GATACAGGTGTGGTGGTCACT 59.376 52.381 0.93 0.00 46.20 3.41
2250 2306 0.756294 TACAGGTGTGGTGGTCACTG 59.244 55.000 0.93 0.00 46.20 3.66
2251 2307 0.980754 ACAGGTGTGGTGGTCACTGA 60.981 55.000 0.00 0.00 46.20 3.41
2252 2308 0.397941 CAGGTGTGGTGGTCACTGAT 59.602 55.000 0.93 0.00 46.20 2.90
2253 2309 1.140312 AGGTGTGGTGGTCACTGATT 58.860 50.000 0.93 0.00 46.20 2.57
2254 2310 2.038426 CAGGTGTGGTGGTCACTGATTA 59.962 50.000 0.93 0.00 46.20 1.75
2263 2319 3.191162 GTGGTCACTGATTATGCTGCAAA 59.809 43.478 6.36 3.01 0.00 3.68
2273 2329 6.695429 TGATTATGCTGCAAATGTTTGGTTA 58.305 32.000 6.36 0.00 38.57 2.85
2274 2330 7.157347 TGATTATGCTGCAAATGTTTGGTTAA 58.843 30.769 6.36 0.00 38.57 2.01
2275 2331 7.658982 TGATTATGCTGCAAATGTTTGGTTAAA 59.341 29.630 6.36 0.00 38.57 1.52
2278 2334 4.024218 TGCTGCAAATGTTTGGTTAAATGC 60.024 37.500 0.00 0.00 38.57 3.56
2281 2337 6.690194 TGCAAATGTTTGGTTAAATGCTTT 57.310 29.167 7.51 0.00 38.57 3.51
2283 2339 5.914074 GCAAATGTTTGGTTAAATGCTTTGG 59.086 36.000 7.51 0.00 38.57 3.28
2294 2350 1.636148 ATGCTTTGGTGGCTTGTGAT 58.364 45.000 0.00 0.00 0.00 3.06
2295 2351 0.675083 TGCTTTGGTGGCTTGTGATG 59.325 50.000 0.00 0.00 0.00 3.07
2296 2352 0.675633 GCTTTGGTGGCTTGTGATGT 59.324 50.000 0.00 0.00 0.00 3.06
2297 2353 1.603678 GCTTTGGTGGCTTGTGATGTG 60.604 52.381 0.00 0.00 0.00 3.21
2298 2354 1.955778 CTTTGGTGGCTTGTGATGTGA 59.044 47.619 0.00 0.00 0.00 3.58
2300 2356 2.291209 TGGTGGCTTGTGATGTGATT 57.709 45.000 0.00 0.00 0.00 2.57
2301 2357 1.887854 TGGTGGCTTGTGATGTGATTG 59.112 47.619 0.00 0.00 0.00 2.67
2302 2358 1.888512 GGTGGCTTGTGATGTGATTGT 59.111 47.619 0.00 0.00 0.00 2.71
2303 2359 2.352030 GGTGGCTTGTGATGTGATTGTG 60.352 50.000 0.00 0.00 0.00 3.33
2304 2360 2.294233 GTGGCTTGTGATGTGATTGTGT 59.706 45.455 0.00 0.00 0.00 3.72
2305 2361 2.293955 TGGCTTGTGATGTGATTGTGTG 59.706 45.455 0.00 0.00 0.00 3.82
2316 2372 3.149196 GTGATTGTGTGTTCATCCACCT 58.851 45.455 0.00 0.00 34.35 4.00
2334 2390 1.455786 CCTGACGAACACACACGATTC 59.544 52.381 0.00 0.00 0.00 2.52
2336 2392 4.698496 CGAACACACACGATTCGC 57.302 55.556 5.86 0.00 38.82 4.70
2337 2393 2.141781 CGAACACACACGATTCGCT 58.858 52.632 5.86 0.00 38.82 4.93
2338 2394 0.179275 CGAACACACACGATTCGCTG 60.179 55.000 5.86 6.54 38.82 5.18
2339 2395 0.859232 GAACACACACGATTCGCTGT 59.141 50.000 5.86 7.17 0.00 4.40
2340 2396 0.859232 AACACACACGATTCGCTGTC 59.141 50.000 5.86 0.00 0.00 3.51
2341 2397 0.249280 ACACACACGATTCGCTGTCA 60.249 50.000 5.86 0.00 0.00 3.58
2346 2402 2.157474 CACACGATTCGCTGTCAATCAA 59.843 45.455 5.86 0.00 31.53 2.57
2347 2403 3.002791 ACACGATTCGCTGTCAATCAAT 58.997 40.909 5.86 0.00 31.53 2.57
2352 2408 4.595116 GATTCGCTGTCAATCAATTCCAG 58.405 43.478 0.00 0.00 31.53 3.86
2360 2416 7.542025 GCTGTCAATCAATTCCAGAATTTACT 58.458 34.615 2.86 0.00 38.84 2.24
2363 2419 8.306038 TGTCAATCAATTCCAGAATTTACTTGG 58.694 33.333 2.86 0.00 38.84 3.61
2365 2421 8.869109 TCAATCAATTCCAGAATTTACTTGGTT 58.131 29.630 2.86 0.00 38.84 3.67
2382 2438 7.875327 ACTTGGTTAAACTATGAGTGTTTGT 57.125 32.000 0.00 0.00 38.02 2.83
2383 2439 7.703328 ACTTGGTTAAACTATGAGTGTTTGTG 58.297 34.615 0.00 0.00 38.02 3.33
2384 2440 6.627395 TGGTTAAACTATGAGTGTTTGTGG 57.373 37.500 0.00 0.00 38.02 4.17
2385 2441 5.009210 TGGTTAAACTATGAGTGTTTGTGGC 59.991 40.000 0.00 0.00 38.02 5.01
2386 2442 5.458015 GTTAAACTATGAGTGTTTGTGGCC 58.542 41.667 0.00 0.00 38.02 5.36
2387 2443 3.508845 AACTATGAGTGTTTGTGGCCT 57.491 42.857 3.32 0.00 0.00 5.19
2388 2444 3.508845 ACTATGAGTGTTTGTGGCCTT 57.491 42.857 3.32 0.00 0.00 4.35
2389 2445 3.149196 ACTATGAGTGTTTGTGGCCTTG 58.851 45.455 3.32 0.00 0.00 3.61
2390 2446 2.363306 ATGAGTGTTTGTGGCCTTGA 57.637 45.000 3.32 0.00 0.00 3.02
2391 2447 2.136298 TGAGTGTTTGTGGCCTTGAA 57.864 45.000 3.32 0.00 0.00 2.69
2392 2448 1.748493 TGAGTGTTTGTGGCCTTGAAC 59.252 47.619 3.32 6.52 0.00 3.18
2393 2449 2.024414 GAGTGTTTGTGGCCTTGAACT 58.976 47.619 3.32 0.00 0.00 3.01
2394 2450 1.750778 AGTGTTTGTGGCCTTGAACTG 59.249 47.619 3.32 0.00 0.00 3.16
2395 2451 1.476488 GTGTTTGTGGCCTTGAACTGT 59.524 47.619 3.32 0.00 0.00 3.55
2396 2452 1.476085 TGTTTGTGGCCTTGAACTGTG 59.524 47.619 3.32 0.00 0.00 3.66
2397 2453 1.110442 TTTGTGGCCTTGAACTGTGG 58.890 50.000 3.32 0.00 0.00 4.17
2398 2454 0.033601 TTGTGGCCTTGAACTGTGGT 60.034 50.000 3.32 0.00 0.00 4.16
2410 2466 4.302455 TGAACTGTGGTTTTGTGTTTGTG 58.698 39.130 0.00 0.00 35.58 3.33
2420 2476 4.695217 TTTGTGTTTGTGACCTGTTCTC 57.305 40.909 0.00 0.00 0.00 2.87
2423 2479 3.627123 TGTGTTTGTGACCTGTTCTCATG 59.373 43.478 0.00 0.00 0.00 3.07
2427 2483 4.681074 TTGTGACCTGTTCTCATGTACA 57.319 40.909 0.00 0.00 0.00 2.90
2431 2487 1.275291 ACCTGTTCTCATGTACACCGG 59.725 52.381 0.00 0.00 0.00 5.28
2433 2489 0.682292 TGTTCTCATGTACACCGGCA 59.318 50.000 0.00 0.00 0.00 5.69
2435 2491 2.290008 TGTTCTCATGTACACCGGCATT 60.290 45.455 0.00 0.00 0.00 3.56
2436 2492 3.055747 TGTTCTCATGTACACCGGCATTA 60.056 43.478 0.00 0.00 0.00 1.90
2448 2504 1.894756 GGCATTACCGCCGCCATTA 60.895 57.895 0.00 0.00 45.52 1.90
2451 2507 1.147376 ATTACCGCCGCCATTAGCA 59.853 52.632 0.00 0.00 44.04 3.49
2452 2508 0.884704 ATTACCGCCGCCATTAGCAG 60.885 55.000 0.00 0.00 44.04 4.24
2453 2509 1.962321 TTACCGCCGCCATTAGCAGA 61.962 55.000 0.00 0.00 44.04 4.26
2454 2510 1.962321 TACCGCCGCCATTAGCAGAA 61.962 55.000 0.00 0.00 44.04 3.02
2455 2511 2.112198 CCGCCGCCATTAGCAGAAA 61.112 57.895 0.00 0.00 44.04 2.52
2456 2512 1.447317 CCGCCGCCATTAGCAGAAAT 61.447 55.000 0.00 0.00 44.04 2.17
2457 2513 0.317269 CGCCGCCATTAGCAGAAATG 60.317 55.000 0.00 0.00 44.04 2.32
2459 2515 0.740149 CCGCCATTAGCAGAAATGCA 59.260 50.000 2.73 0.00 44.04 3.96
2461 2517 1.672363 CGCCATTAGCAGAAATGCAGA 59.328 47.619 2.73 0.00 44.04 4.26
2462 2518 2.097954 CGCCATTAGCAGAAATGCAGAA 59.902 45.455 2.73 0.00 44.04 3.02
2463 2519 3.243301 CGCCATTAGCAGAAATGCAGAAT 60.243 43.478 2.73 0.00 44.04 2.40
2533 2684 0.028642 AATACTGGGAGGGGATGGCT 60.029 55.000 0.00 0.00 0.00 4.75
2543 2694 1.362237 AGGGGATGGCTTGGATTCAAA 59.638 47.619 0.00 0.00 31.77 2.69
2545 2696 1.482182 GGGATGGCTTGGATTCAAACC 59.518 52.381 0.00 0.00 39.07 3.27
2550 2701 2.108075 TGGCTTGGATTCAAACCTCAGA 59.892 45.455 7.68 0.00 39.29 3.27
2555 2706 5.047802 GCTTGGATTCAAACCTCAGATTTCA 60.048 40.000 0.00 0.00 31.77 2.69
2561 2712 8.576442 GGATTCAAACCTCAGATTTCAAGTAAA 58.424 33.333 0.00 0.00 0.00 2.01
2582 2733 3.127425 AGCGATCTAATTAAGCACCCC 57.873 47.619 0.00 0.00 0.00 4.95
2583 2734 1.798813 GCGATCTAATTAAGCACCCCG 59.201 52.381 0.00 0.00 0.00 5.73
2590 2741 3.706600 AATTAAGCACCCCGTCACTTA 57.293 42.857 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 2.802816 GCAGAGATACTTTGGTATGGCG 59.197 50.000 0.00 0.00 38.60 5.69
283 284 0.107848 AAGGCGCGCTACTTACCAAT 60.108 50.000 32.29 0.75 0.00 3.16
542 543 6.012771 TCAATCTATCCCGGTCTACTCTATGA 60.013 42.308 0.00 0.00 0.00 2.15
617 618 4.526970 GAGCAAAGTTAAGGGATGGATGA 58.473 43.478 0.00 0.00 0.00 2.92
814 815 5.067153 TGTTTGGATTGGCGGTATCTAATTG 59.933 40.000 0.00 0.00 0.00 2.32
819 820 2.365582 GTGTTTGGATTGGCGGTATCT 58.634 47.619 0.00 0.00 0.00 1.98
837 838 2.701006 CGCTTTATGGGTCGCGTG 59.299 61.111 5.77 0.00 40.64 5.34
933 941 3.471806 GGGAAGAGGAGCGGGGAC 61.472 72.222 0.00 0.00 0.00 4.46
934 942 4.798682 GGGGAAGAGGAGCGGGGA 62.799 72.222 0.00 0.00 0.00 4.81
992 1000 3.613877 TTGCTTACCATGGCGGCGA 62.614 57.895 12.98 10.70 39.03 5.54
1028 1036 0.264955 ACGAGAGGGGATGGTATGGT 59.735 55.000 0.00 0.00 0.00 3.55
1032 1040 0.185416 GAGGACGAGAGGGGATGGTA 59.815 60.000 0.00 0.00 0.00 3.25
1033 1041 1.075896 GAGGACGAGAGGGGATGGT 60.076 63.158 0.00 0.00 0.00 3.55
1036 1050 0.930726 AGAAGAGGACGAGAGGGGAT 59.069 55.000 0.00 0.00 0.00 3.85
1055 1069 3.577919 GAATTAGAGCCTAGGTCAGGGA 58.422 50.000 11.31 0.00 45.66 4.20
1064 1078 3.387050 GGAGGAAACGGAATTAGAGCCTA 59.613 47.826 0.00 0.00 0.00 3.93
1105 1138 4.700365 CAGCGTCACCGACTGCGA 62.700 66.667 0.00 0.00 40.82 5.10
1299 1332 4.424711 TTGCCGCCCCAGATGGAC 62.425 66.667 0.00 0.00 37.39 4.02
1491 1524 0.833949 GGGTCTTCTCCATGAGGTCC 59.166 60.000 0.00 0.00 35.89 4.46
1591 1624 2.099062 GCACCAAGAAGCATCGCG 59.901 61.111 0.00 0.00 0.00 5.87
1592 1625 2.042831 AGGCACCAAGAAGCATCGC 61.043 57.895 0.00 0.00 0.00 4.58
1595 1628 0.403271 AGTCAGGCACCAAGAAGCAT 59.597 50.000 0.00 0.00 0.00 3.79
1604 1637 1.021390 CGAATCACCAGTCAGGCACC 61.021 60.000 0.00 0.00 43.14 5.01
1605 1638 1.639298 GCGAATCACCAGTCAGGCAC 61.639 60.000 0.00 0.00 43.14 5.01
1608 1641 0.460987 GGAGCGAATCACCAGTCAGG 60.461 60.000 0.00 0.00 45.67 3.86
1612 1645 1.513158 CGAGGAGCGAATCACCAGT 59.487 57.895 0.00 0.00 44.57 4.00
1630 1663 3.911661 AGCAACACAAGCAAAGAGATC 57.088 42.857 0.00 0.00 0.00 2.75
1631 1664 5.972107 ATTAGCAACACAAGCAAAGAGAT 57.028 34.783 0.00 0.00 0.00 2.75
1636 1669 6.155475 ACCTAAATTAGCAACACAAGCAAA 57.845 33.333 0.00 0.00 0.00 3.68
1638 1671 6.001460 AGTACCTAAATTAGCAACACAAGCA 58.999 36.000 0.00 0.00 0.00 3.91
1643 1676 7.465513 CGATTCCAGTACCTAAATTAGCAACAC 60.466 40.741 0.00 0.00 0.00 3.32
1654 1690 6.585416 GGGTAAAATCGATTCCAGTACCTAA 58.415 40.000 24.57 1.52 31.99 2.69
1659 1695 4.441913 GGACGGGTAAAATCGATTCCAGTA 60.442 45.833 16.40 4.16 0.00 2.74
1678 1714 4.022242 AGGATGATATTACAGAACCGGACG 60.022 45.833 9.46 0.00 0.00 4.79
1682 1718 5.122512 ACGAGGATGATATTACAGAACCG 57.877 43.478 0.00 0.00 0.00 4.44
1684 1720 6.761714 ACCAAACGAGGATGATATTACAGAAC 59.238 38.462 0.00 0.00 0.00 3.01
1712 1748 1.908619 TGCAGGCAGGTAGAATTCAGA 59.091 47.619 8.44 0.00 0.00 3.27
1742 1786 7.417496 CATCCAGTATGTTGTATCATCAGTG 57.583 40.000 0.00 0.00 0.00 3.66
1756 1809 1.210234 TGAGCCACCACATCCAGTATG 59.790 52.381 0.00 0.00 41.74 2.39
1757 1810 1.487976 CTGAGCCACCACATCCAGTAT 59.512 52.381 0.00 0.00 0.00 2.12
1758 1811 0.904649 CTGAGCCACCACATCCAGTA 59.095 55.000 0.00 0.00 0.00 2.74
1759 1812 1.681666 CTGAGCCACCACATCCAGT 59.318 57.895 0.00 0.00 0.00 4.00
1760 1813 1.077930 CCTGAGCCACCACATCCAG 60.078 63.158 0.00 0.00 0.00 3.86
1764 1817 1.067295 TTCTTCCTGAGCCACCACAT 58.933 50.000 0.00 0.00 0.00 3.21
1765 1818 1.067295 ATTCTTCCTGAGCCACCACA 58.933 50.000 0.00 0.00 0.00 4.17
1766 1819 1.271597 ACATTCTTCCTGAGCCACCAC 60.272 52.381 0.00 0.00 0.00 4.16
1767 1820 1.003580 GACATTCTTCCTGAGCCACCA 59.996 52.381 0.00 0.00 0.00 4.17
1768 1821 1.743996 GACATTCTTCCTGAGCCACC 58.256 55.000 0.00 0.00 0.00 4.61
1770 1823 0.391661 GCGACATTCTTCCTGAGCCA 60.392 55.000 0.00 0.00 0.00 4.75
1771 1824 1.092345 GGCGACATTCTTCCTGAGCC 61.092 60.000 0.00 0.00 35.29 4.70
1773 1826 2.393271 AAGGCGACATTCTTCCTGAG 57.607 50.000 0.00 0.00 0.00 3.35
1775 1828 1.135575 GCAAAGGCGACATTCTTCCTG 60.136 52.381 0.00 0.00 0.00 3.86
1776 1829 1.168714 GCAAAGGCGACATTCTTCCT 58.831 50.000 0.00 0.00 0.00 3.36
1777 1830 3.702478 GCAAAGGCGACATTCTTCC 57.298 52.632 0.00 0.00 0.00 3.46
1785 1838 3.186315 CTGCAGATCAGCAAAGGCGAC 62.186 57.143 14.18 0.00 45.13 5.19
1787 1840 1.428219 CTGCAGATCAGCAAAGGCG 59.572 57.895 14.18 0.00 45.13 5.52
1788 1841 1.807886 CCTGCAGATCAGCAAAGGC 59.192 57.895 17.39 0.00 45.13 4.35
1789 1842 0.680280 AGCCTGCAGATCAGCAAAGG 60.680 55.000 17.39 13.22 45.13 3.11
1790 1843 1.174783 AAGCCTGCAGATCAGCAAAG 58.825 50.000 17.39 9.46 45.13 2.77
1793 1846 2.563297 CAAAGCCTGCAGATCAGCA 58.437 52.632 17.39 12.62 41.50 4.41
1806 1859 0.893447 AGCAAGAGGAATGGCAAAGC 59.107 50.000 0.00 0.00 0.00 3.51
1807 1860 1.403780 GCAGCAAGAGGAATGGCAAAG 60.404 52.381 0.00 0.00 0.00 2.77
1808 1861 0.604578 GCAGCAAGAGGAATGGCAAA 59.395 50.000 0.00 0.00 0.00 3.68
1809 1862 0.251474 AGCAGCAAGAGGAATGGCAA 60.251 50.000 0.00 0.00 0.00 4.52
1813 1866 3.715854 GCAAGCAGCAAGAGGAATG 57.284 52.632 0.00 0.00 44.79 2.67
1823 1876 4.672413 CGCAAATTATAAGTAGCAAGCAGC 59.328 41.667 0.00 0.00 46.19 5.25
1824 1877 6.048073 TCGCAAATTATAAGTAGCAAGCAG 57.952 37.500 0.00 0.00 0.00 4.24
1825 1878 6.038161 ACATCGCAAATTATAAGTAGCAAGCA 59.962 34.615 0.00 0.00 0.00 3.91
1826 1879 6.430451 ACATCGCAAATTATAAGTAGCAAGC 58.570 36.000 6.62 0.00 0.00 4.01
1827 1880 8.736742 CAAACATCGCAAATTATAAGTAGCAAG 58.263 33.333 6.62 0.05 0.00 4.01
1828 1881 8.454894 TCAAACATCGCAAATTATAAGTAGCAA 58.545 29.630 6.62 0.00 0.00 3.91
1829 1882 7.980062 TCAAACATCGCAAATTATAAGTAGCA 58.020 30.769 6.62 0.00 0.00 3.49
1830 1883 8.734030 GTTCAAACATCGCAAATTATAAGTAGC 58.266 33.333 0.00 0.00 0.00 3.58
1831 1884 8.933955 CGTTCAAACATCGCAAATTATAAGTAG 58.066 33.333 0.00 0.00 0.00 2.57
1832 1885 8.657729 TCGTTCAAACATCGCAAATTATAAGTA 58.342 29.630 0.00 0.00 0.00 2.24
1833 1886 7.523219 TCGTTCAAACATCGCAAATTATAAGT 58.477 30.769 0.00 0.00 0.00 2.24
1834 1887 7.304849 GCTCGTTCAAACATCGCAAATTATAAG 60.305 37.037 0.00 0.00 0.00 1.73
1835 1888 6.467682 GCTCGTTCAAACATCGCAAATTATAA 59.532 34.615 0.00 0.00 0.00 0.98
1836 1889 5.963004 GCTCGTTCAAACATCGCAAATTATA 59.037 36.000 0.00 0.00 0.00 0.98
1837 1890 4.793216 GCTCGTTCAAACATCGCAAATTAT 59.207 37.500 0.00 0.00 0.00 1.28
1838 1891 4.155449 GCTCGTTCAAACATCGCAAATTA 58.845 39.130 0.00 0.00 0.00 1.40
1839 1892 2.979813 GCTCGTTCAAACATCGCAAATT 59.020 40.909 0.00 0.00 0.00 1.82
1840 1893 2.584791 GCTCGTTCAAACATCGCAAAT 58.415 42.857 0.00 0.00 0.00 2.32
1841 1894 1.658931 CGCTCGTTCAAACATCGCAAA 60.659 47.619 0.00 0.00 0.00 3.68
1842 1895 0.110867 CGCTCGTTCAAACATCGCAA 60.111 50.000 0.00 0.00 0.00 4.85
1843 1896 0.941936 TCGCTCGTTCAAACATCGCA 60.942 50.000 0.00 0.00 0.00 5.10
1844 1897 0.162933 TTCGCTCGTTCAAACATCGC 59.837 50.000 0.00 0.00 0.00 4.58
1845 1898 2.421523 CATTCGCTCGTTCAAACATCG 58.578 47.619 0.00 0.00 0.00 3.84
1846 1899 2.415168 TCCATTCGCTCGTTCAAACATC 59.585 45.455 0.00 0.00 0.00 3.06
1847 1900 2.422597 TCCATTCGCTCGTTCAAACAT 58.577 42.857 0.00 0.00 0.00 2.71
1848 1901 1.872388 TCCATTCGCTCGTTCAAACA 58.128 45.000 0.00 0.00 0.00 2.83
1849 1902 2.961522 TTCCATTCGCTCGTTCAAAC 57.038 45.000 0.00 0.00 0.00 2.93
1850 1903 4.497473 AAATTCCATTCGCTCGTTCAAA 57.503 36.364 0.00 0.00 0.00 2.69
1851 1904 4.434989 CGTAAATTCCATTCGCTCGTTCAA 60.435 41.667 0.00 0.00 0.00 2.69
1852 1905 3.061563 CGTAAATTCCATTCGCTCGTTCA 59.938 43.478 0.00 0.00 0.00 3.18
1853 1906 3.061697 ACGTAAATTCCATTCGCTCGTTC 59.938 43.478 0.00 0.00 0.00 3.95
1854 1907 2.997986 ACGTAAATTCCATTCGCTCGTT 59.002 40.909 0.00 0.00 0.00 3.85
1855 1908 2.347452 CACGTAAATTCCATTCGCTCGT 59.653 45.455 0.00 0.00 0.00 4.18
1856 1909 2.347452 ACACGTAAATTCCATTCGCTCG 59.653 45.455 0.00 0.00 0.00 5.03
1857 1910 4.336532 AACACGTAAATTCCATTCGCTC 57.663 40.909 0.00 0.00 0.00 5.03
1858 1911 4.214545 TGAAACACGTAAATTCCATTCGCT 59.785 37.500 0.00 0.00 0.00 4.93
1859 1912 4.468643 TGAAACACGTAAATTCCATTCGC 58.531 39.130 0.00 0.00 0.00 4.70
1860 1913 4.553429 GCTGAAACACGTAAATTCCATTCG 59.447 41.667 0.00 0.00 0.00 3.34
1861 1914 5.569059 CAGCTGAAACACGTAAATTCCATTC 59.431 40.000 8.42 0.00 0.00 2.67
1862 1915 5.009610 ACAGCTGAAACACGTAAATTCCATT 59.990 36.000 23.35 0.00 0.00 3.16
1863 1916 4.518970 ACAGCTGAAACACGTAAATTCCAT 59.481 37.500 23.35 0.00 0.00 3.41
1864 1917 3.880490 ACAGCTGAAACACGTAAATTCCA 59.120 39.130 23.35 0.00 0.00 3.53
1865 1918 4.024387 TCACAGCTGAAACACGTAAATTCC 60.024 41.667 23.35 0.00 0.00 3.01
1866 1919 5.050363 TCTCACAGCTGAAACACGTAAATTC 60.050 40.000 23.35 0.00 0.00 2.17
1867 1920 4.814234 TCTCACAGCTGAAACACGTAAATT 59.186 37.500 23.35 0.00 0.00 1.82
1868 1921 4.377021 TCTCACAGCTGAAACACGTAAAT 58.623 39.130 23.35 0.00 0.00 1.40
1869 1922 3.787785 TCTCACAGCTGAAACACGTAAA 58.212 40.909 23.35 0.00 0.00 2.01
1870 1923 3.446310 TCTCACAGCTGAAACACGTAA 57.554 42.857 23.35 0.00 0.00 3.18
1871 1924 3.317150 CATCTCACAGCTGAAACACGTA 58.683 45.455 23.35 0.00 0.00 3.57
1872 1925 2.138320 CATCTCACAGCTGAAACACGT 58.862 47.619 23.35 0.00 0.00 4.49
1873 1926 1.462283 CCATCTCACAGCTGAAACACG 59.538 52.381 23.35 4.33 0.00 4.49
1874 1927 1.198637 GCCATCTCACAGCTGAAACAC 59.801 52.381 23.35 0.00 0.00 3.32
1875 1928 1.072806 AGCCATCTCACAGCTGAAACA 59.927 47.619 23.35 1.29 34.99 2.83
1876 1929 1.818642 AGCCATCTCACAGCTGAAAC 58.181 50.000 23.35 0.51 34.99 2.78
1877 1930 2.156917 CAAGCCATCTCACAGCTGAAA 58.843 47.619 23.35 6.67 36.84 2.69
1878 1931 1.072806 ACAAGCCATCTCACAGCTGAA 59.927 47.619 23.35 7.07 36.84 3.02
1879 1932 0.689055 ACAAGCCATCTCACAGCTGA 59.311 50.000 23.35 0.00 36.84 4.26
1880 1933 1.085091 GACAAGCCATCTCACAGCTG 58.915 55.000 13.48 13.48 36.84 4.24
1881 1934 0.689055 TGACAAGCCATCTCACAGCT 59.311 50.000 0.00 0.00 38.88 4.24
1882 1935 0.801251 GTGACAAGCCATCTCACAGC 59.199 55.000 0.00 0.00 35.39 4.40
1883 1936 1.002888 AGGTGACAAGCCATCTCACAG 59.997 52.381 0.00 0.00 36.76 3.66
1884 1937 1.059098 AGGTGACAAGCCATCTCACA 58.941 50.000 0.00 0.00 36.76 3.58
1885 1938 1.002430 TCAGGTGACAAGCCATCTCAC 59.998 52.381 0.00 0.00 34.68 3.51
1886 1939 1.351076 TCAGGTGACAAGCCATCTCA 58.649 50.000 0.00 0.00 0.00 3.27
1887 1940 2.479566 TTCAGGTGACAAGCCATCTC 57.520 50.000 0.00 0.00 0.00 2.75
1888 1941 3.446442 AATTCAGGTGACAAGCCATCT 57.554 42.857 0.00 0.00 0.00 2.90
1889 1942 4.702131 ACTAAATTCAGGTGACAAGCCATC 59.298 41.667 0.00 0.00 0.00 3.51
1890 1943 4.666512 ACTAAATTCAGGTGACAAGCCAT 58.333 39.130 0.00 0.00 0.00 4.40
1891 1944 4.098914 ACTAAATTCAGGTGACAAGCCA 57.901 40.909 0.00 0.00 0.00 4.75
1892 1945 4.798574 CAACTAAATTCAGGTGACAAGCC 58.201 43.478 0.00 0.00 35.06 4.35
1893 1946 4.229876 GCAACTAAATTCAGGTGACAAGC 58.770 43.478 0.00 0.00 35.06 4.01
1894 1947 4.798574 GGCAACTAAATTCAGGTGACAAG 58.201 43.478 0.00 0.00 41.29 3.16
1929 1982 4.292186 ACACTATCATGTTCTTGCAGGT 57.708 40.909 0.00 0.00 0.00 4.00
1937 1993 9.144747 CAATATAGCCAGTACACTATCATGTTC 57.855 37.037 6.41 0.00 33.85 3.18
1945 2001 8.478775 AATCAGTCAATATAGCCAGTACACTA 57.521 34.615 0.00 0.00 0.00 2.74
1956 2012 9.995957 CACTCGAGGTATAATCAGTCAATATAG 57.004 37.037 18.41 0.00 0.00 1.31
1961 2017 6.525578 AACACTCGAGGTATAATCAGTCAA 57.474 37.500 18.41 0.00 0.00 3.18
1975 2031 4.749245 AGCATTTAACCAAACACTCGAG 57.251 40.909 11.84 11.84 0.00 4.04
1976 2032 4.319190 CGAAGCATTTAACCAAACACTCGA 60.319 41.667 0.00 0.00 0.00 4.04
1977 2033 3.906008 CGAAGCATTTAACCAAACACTCG 59.094 43.478 0.00 0.00 0.00 4.18
1995 2051 2.133553 CAGTATCATCAGCCAGCGAAG 58.866 52.381 0.00 0.00 0.00 3.79
1996 2052 1.807755 GCAGTATCATCAGCCAGCGAA 60.808 52.381 0.00 0.00 0.00 4.70
1997 2053 0.249615 GCAGTATCATCAGCCAGCGA 60.250 55.000 0.00 0.00 0.00 4.93
1998 2054 0.531311 TGCAGTATCATCAGCCAGCG 60.531 55.000 0.00 0.00 0.00 5.18
1999 2055 1.602851 CTTGCAGTATCATCAGCCAGC 59.397 52.381 0.00 0.00 0.00 4.85
2000 2056 2.612672 CACTTGCAGTATCATCAGCCAG 59.387 50.000 0.00 0.00 0.00 4.85
2001 2057 2.026915 ACACTTGCAGTATCATCAGCCA 60.027 45.455 0.00 0.00 0.00 4.75
2002 2058 2.611292 GACACTTGCAGTATCATCAGCC 59.389 50.000 0.00 0.00 0.00 4.85
2003 2059 3.309138 CAGACACTTGCAGTATCATCAGC 59.691 47.826 0.00 0.00 0.00 4.26
2004 2060 3.869832 CCAGACACTTGCAGTATCATCAG 59.130 47.826 0.00 0.00 0.00 2.90
2005 2061 3.261643 ACCAGACACTTGCAGTATCATCA 59.738 43.478 0.00 0.00 0.00 3.07
2006 2062 3.866651 ACCAGACACTTGCAGTATCATC 58.133 45.455 0.00 0.00 0.00 2.92
2007 2063 3.988976 ACCAGACACTTGCAGTATCAT 57.011 42.857 0.00 0.00 0.00 2.45
2008 2064 3.769739 AACCAGACACTTGCAGTATCA 57.230 42.857 0.00 0.00 0.00 2.15
2009 2065 6.149474 ACAATTAACCAGACACTTGCAGTATC 59.851 38.462 0.00 0.00 0.00 2.24
2010 2066 6.003950 ACAATTAACCAGACACTTGCAGTAT 58.996 36.000 0.00 0.00 0.00 2.12
2011 2067 5.373222 ACAATTAACCAGACACTTGCAGTA 58.627 37.500 0.00 0.00 0.00 2.74
2012 2068 4.207165 ACAATTAACCAGACACTTGCAGT 58.793 39.130 0.00 0.00 0.00 4.40
2013 2069 4.836125 ACAATTAACCAGACACTTGCAG 57.164 40.909 0.00 0.00 0.00 4.41
2014 2070 4.642437 TGAACAATTAACCAGACACTTGCA 59.358 37.500 0.00 0.00 0.00 4.08
2015 2071 5.181690 TGAACAATTAACCAGACACTTGC 57.818 39.130 0.00 0.00 0.00 4.01
2016 2072 5.630680 GCATGAACAATTAACCAGACACTTG 59.369 40.000 0.00 0.00 0.00 3.16
2017 2073 5.278957 GGCATGAACAATTAACCAGACACTT 60.279 40.000 0.00 0.00 0.00 3.16
2018 2074 4.218417 GGCATGAACAATTAACCAGACACT 59.782 41.667 0.00 0.00 0.00 3.55
2019 2075 4.218417 AGGCATGAACAATTAACCAGACAC 59.782 41.667 0.00 0.00 0.00 3.67
2020 2076 4.406456 AGGCATGAACAATTAACCAGACA 58.594 39.130 0.00 0.00 0.00 3.41
2021 2077 5.183904 AGAAGGCATGAACAATTAACCAGAC 59.816 40.000 0.00 0.00 0.00 3.51
2022 2078 5.324409 AGAAGGCATGAACAATTAACCAGA 58.676 37.500 0.00 0.00 0.00 3.86
2023 2079 5.649782 AGAAGGCATGAACAATTAACCAG 57.350 39.130 0.00 0.00 0.00 4.00
2031 2087 1.885887 CGGGAAAGAAGGCATGAACAA 59.114 47.619 0.00 0.00 0.00 2.83
2036 2092 1.945394 CAGATCGGGAAAGAAGGCATG 59.055 52.381 0.00 0.00 0.00 4.06
2037 2093 1.748591 GCAGATCGGGAAAGAAGGCAT 60.749 52.381 0.00 0.00 0.00 4.40
2038 2094 0.392998 GCAGATCGGGAAAGAAGGCA 60.393 55.000 0.00 0.00 0.00 4.75
2039 2095 0.392998 TGCAGATCGGGAAAGAAGGC 60.393 55.000 0.00 0.00 0.00 4.35
2040 2096 1.661341 CTGCAGATCGGGAAAGAAGG 58.339 55.000 8.42 0.00 0.00 3.46
2041 2097 1.661341 CCTGCAGATCGGGAAAGAAG 58.339 55.000 17.39 0.00 44.37 2.85
2042 2098 0.392998 GCCTGCAGATCGGGAAAGAA 60.393 55.000 17.39 0.00 44.37 2.52
2043 2099 1.221840 GCCTGCAGATCGGGAAAGA 59.778 57.895 17.39 0.00 44.37 2.52
2044 2100 0.393537 AAGCCTGCAGATCGGGAAAG 60.394 55.000 17.39 0.00 44.37 2.62
2045 2101 0.038166 AAAGCCTGCAGATCGGGAAA 59.962 50.000 17.39 0.00 44.37 3.13
2046 2102 0.677731 CAAAGCCTGCAGATCGGGAA 60.678 55.000 17.39 0.00 44.37 3.97
2047 2103 1.078214 CAAAGCCTGCAGATCGGGA 60.078 57.895 17.39 0.00 44.37 5.14
2048 2104 3.506108 CAAAGCCTGCAGATCGGG 58.494 61.111 17.39 0.00 44.43 5.14
2061 2117 1.973138 CAGCAAGACGAATGGCAAAG 58.027 50.000 0.00 0.00 0.00 2.77
2064 2120 0.890542 AAGCAGCAAGACGAATGGCA 60.891 50.000 0.00 0.00 0.00 4.92
2081 2137 5.631026 ACATCGCAAATTACAAGTAGCAAG 58.369 37.500 0.00 0.00 0.00 4.01
2086 2142 6.575572 CGTTCAAACATCGCAAATTACAAGTA 59.424 34.615 0.00 0.00 0.00 2.24
2092 2148 4.155449 GCTCGTTCAAACATCGCAAATTA 58.845 39.130 0.00 0.00 0.00 1.40
2095 2151 1.658931 CGCTCGTTCAAACATCGCAAA 60.659 47.619 0.00 0.00 0.00 3.68
2098 2154 0.162933 TTCGCTCGTTCAAACATCGC 59.837 50.000 0.00 0.00 0.00 4.58
2099 2155 2.421523 CATTCGCTCGTTCAAACATCG 58.578 47.619 0.00 0.00 0.00 3.84
2109 2165 0.729116 CTTGCATTCCATTCGCTCGT 59.271 50.000 0.00 0.00 0.00 4.18
2114 2170 5.404946 ACAGAAATTCTTGCATTCCATTCG 58.595 37.500 0.00 0.00 0.00 3.34
2120 2176 6.618811 ACTGATGACAGAAATTCTTGCATTC 58.381 36.000 8.23 0.00 46.03 2.67
2122 2178 6.883217 ACTACTGATGACAGAAATTCTTGCAT 59.117 34.615 6.95 6.95 46.03 3.96
2123 2179 6.148315 CACTACTGATGACAGAAATTCTTGCA 59.852 38.462 0.00 0.00 46.03 4.08
2124 2180 6.402983 CCACTACTGATGACAGAAATTCTTGC 60.403 42.308 0.00 0.00 46.03 4.01
2125 2181 6.875726 TCCACTACTGATGACAGAAATTCTTG 59.124 38.462 0.00 0.00 46.03 3.02
2126 2182 7.009179 TCCACTACTGATGACAGAAATTCTT 57.991 36.000 0.00 0.00 46.03 2.52
2127 2183 6.611613 TCCACTACTGATGACAGAAATTCT 57.388 37.500 0.00 0.00 46.03 2.40
2128 2184 7.856145 ATTCCACTACTGATGACAGAAATTC 57.144 36.000 0.00 0.00 46.03 2.17
2129 2185 8.641498 AAATTCCACTACTGATGACAGAAATT 57.359 30.769 0.00 0.00 46.03 1.82
2130 2186 9.167311 GTAAATTCCACTACTGATGACAGAAAT 57.833 33.333 0.00 0.00 46.03 2.17
2131 2187 8.154203 TGTAAATTCCACTACTGATGACAGAAA 58.846 33.333 0.00 0.00 46.03 2.52
2132 2188 7.602644 GTGTAAATTCCACTACTGATGACAGAA 59.397 37.037 0.00 0.00 46.03 3.02
2133 2189 7.097192 GTGTAAATTCCACTACTGATGACAGA 58.903 38.462 0.00 0.00 46.03 3.41
2135 2191 5.867174 CGTGTAAATTCCACTACTGATGACA 59.133 40.000 6.64 0.00 0.00 3.58
2136 2192 6.097356 TCGTGTAAATTCCACTACTGATGAC 58.903 40.000 6.64 0.00 0.00 3.06
2137 2193 6.275494 TCGTGTAAATTCCACTACTGATGA 57.725 37.500 6.64 0.00 0.00 2.92
2138 2194 7.277760 TGAATCGTGTAAATTCCACTACTGATG 59.722 37.037 6.64 0.00 33.13 3.07
2139 2195 7.327975 TGAATCGTGTAAATTCCACTACTGAT 58.672 34.615 6.64 0.86 33.13 2.90
2140 2196 6.693466 TGAATCGTGTAAATTCCACTACTGA 58.307 36.000 6.64 0.00 33.13 3.41
2141 2197 6.455646 GCTGAATCGTGTAAATTCCACTACTG 60.456 42.308 6.64 0.00 33.13 2.74
2142 2198 5.581085 GCTGAATCGTGTAAATTCCACTACT 59.419 40.000 6.64 0.00 33.13 2.57
2143 2199 5.581085 AGCTGAATCGTGTAAATTCCACTAC 59.419 40.000 6.64 0.00 33.13 2.73
2144 2200 5.580691 CAGCTGAATCGTGTAAATTCCACTA 59.419 40.000 8.42 0.00 33.13 2.74
2145 2201 4.393062 CAGCTGAATCGTGTAAATTCCACT 59.607 41.667 8.42 0.00 33.13 4.00
2146 2202 4.154195 ACAGCTGAATCGTGTAAATTCCAC 59.846 41.667 23.35 0.00 33.13 4.02
2147 2203 4.154015 CACAGCTGAATCGTGTAAATTCCA 59.846 41.667 23.35 0.00 33.13 3.53
2148 2204 4.391830 TCACAGCTGAATCGTGTAAATTCC 59.608 41.667 23.35 0.00 33.13 3.01
2149 2205 5.348724 TCTCACAGCTGAATCGTGTAAATTC 59.651 40.000 23.35 0.00 34.40 2.17
2150 2206 5.237815 TCTCACAGCTGAATCGTGTAAATT 58.762 37.500 23.35 0.00 32.42 1.82
2151 2207 4.820897 TCTCACAGCTGAATCGTGTAAAT 58.179 39.130 23.35 0.00 32.42 1.40
2152 2208 4.237724 CTCTCACAGCTGAATCGTGTAAA 58.762 43.478 23.35 0.00 32.42 2.01
2153 2209 3.367395 CCTCTCACAGCTGAATCGTGTAA 60.367 47.826 23.35 0.00 32.42 2.41
2154 2210 2.164422 CCTCTCACAGCTGAATCGTGTA 59.836 50.000 23.35 0.22 32.42 2.90
2155 2211 1.067283 CCTCTCACAGCTGAATCGTGT 60.067 52.381 23.35 0.00 32.42 4.49
2156 2212 1.067283 ACCTCTCACAGCTGAATCGTG 60.067 52.381 23.35 7.93 0.00 4.35
2157 2213 1.261480 ACCTCTCACAGCTGAATCGT 58.739 50.000 23.35 5.43 0.00 3.73
2158 2214 2.376808 AACCTCTCACAGCTGAATCG 57.623 50.000 23.35 5.78 0.00 3.34
2159 2215 3.817647 ACAAAACCTCTCACAGCTGAATC 59.182 43.478 23.35 0.00 0.00 2.52
2160 2216 3.817647 GACAAAACCTCTCACAGCTGAAT 59.182 43.478 23.35 0.00 0.00 2.57
2161 2217 3.206150 GACAAAACCTCTCACAGCTGAA 58.794 45.455 23.35 7.07 0.00 3.02
2162 2218 2.170397 TGACAAAACCTCTCACAGCTGA 59.830 45.455 23.35 0.00 0.00 4.26
2163 2219 2.289002 GTGACAAAACCTCTCACAGCTG 59.711 50.000 13.48 13.48 35.39 4.24
2164 2220 2.565841 GTGACAAAACCTCTCACAGCT 58.434 47.619 0.00 0.00 35.39 4.24
2165 2221 1.604278 GGTGACAAAACCTCTCACAGC 59.396 52.381 0.00 0.00 36.76 4.40
2174 2230 4.400529 ACCAAATTCAGGTGACAAAACC 57.599 40.909 1.98 0.00 38.13 3.27
2175 2231 4.033932 GCAACCAAATTCAGGTGACAAAAC 59.966 41.667 3.52 0.00 39.86 2.43
2176 2232 4.187694 GCAACCAAATTCAGGTGACAAAA 58.812 39.130 3.52 0.00 39.86 2.44
2177 2233 3.431486 GGCAACCAAATTCAGGTGACAAA 60.431 43.478 3.52 0.00 39.86 2.83
2178 2234 2.102252 GGCAACCAAATTCAGGTGACAA 59.898 45.455 3.52 0.00 39.86 3.18
2179 2235 1.686052 GGCAACCAAATTCAGGTGACA 59.314 47.619 3.52 0.00 39.86 3.58
2180 2236 1.963515 AGGCAACCAAATTCAGGTGAC 59.036 47.619 3.52 0.00 39.86 3.67
2181 2237 1.962807 CAGGCAACCAAATTCAGGTGA 59.037 47.619 3.52 0.00 39.86 4.02
2182 2238 1.962807 TCAGGCAACCAAATTCAGGTG 59.037 47.619 3.52 0.00 39.86 4.00
2183 2239 2.380064 TCAGGCAACCAAATTCAGGT 57.620 45.000 0.00 0.00 42.34 4.00
2184 2240 3.967332 ATTCAGGCAACCAAATTCAGG 57.033 42.857 0.00 0.00 37.17 3.86
2185 2241 7.775120 AGTTATATTCAGGCAACCAAATTCAG 58.225 34.615 0.00 0.00 37.17 3.02
2186 2242 7.716799 AGTTATATTCAGGCAACCAAATTCA 57.283 32.000 0.00 0.00 37.17 2.57
2187 2243 8.135529 GGTAGTTATATTCAGGCAACCAAATTC 58.864 37.037 0.00 0.00 37.17 2.17
2188 2244 7.839200 AGGTAGTTATATTCAGGCAACCAAATT 59.161 33.333 0.00 0.00 37.17 1.82
2189 2245 7.285401 CAGGTAGTTATATTCAGGCAACCAAAT 59.715 37.037 0.00 0.00 37.17 2.32
2190 2246 6.601613 CAGGTAGTTATATTCAGGCAACCAAA 59.398 38.462 0.00 0.00 37.17 3.28
2191 2247 6.119536 CAGGTAGTTATATTCAGGCAACCAA 58.880 40.000 0.00 0.00 37.17 3.67
2192 2248 5.680619 CAGGTAGTTATATTCAGGCAACCA 58.319 41.667 0.00 0.00 37.17 3.67
2193 2249 4.515567 GCAGGTAGTTATATTCAGGCAACC 59.484 45.833 0.00 0.00 37.17 3.77
2194 2250 4.515567 GGCAGGTAGTTATATTCAGGCAAC 59.484 45.833 0.00 0.00 0.00 4.17
2195 2251 4.412199 AGGCAGGTAGTTATATTCAGGCAA 59.588 41.667 0.00 0.00 0.00 4.52
2196 2252 3.973973 AGGCAGGTAGTTATATTCAGGCA 59.026 43.478 0.00 0.00 0.00 4.75
2197 2253 4.319177 CAGGCAGGTAGTTATATTCAGGC 58.681 47.826 0.00 0.00 0.00 4.85
2198 2254 4.202357 TGCAGGCAGGTAGTTATATTCAGG 60.202 45.833 0.00 0.00 0.00 3.86
2199 2255 4.960938 TGCAGGCAGGTAGTTATATTCAG 58.039 43.478 0.00 0.00 0.00 3.02
2200 2256 5.130311 TCTTGCAGGCAGGTAGTTATATTCA 59.870 40.000 3.25 0.00 0.00 2.57
2201 2257 5.611374 TCTTGCAGGCAGGTAGTTATATTC 58.389 41.667 3.25 0.00 0.00 1.75
2202 2258 5.630415 TCTTGCAGGCAGGTAGTTATATT 57.370 39.130 3.25 0.00 0.00 1.28
2203 2259 5.104527 TGTTCTTGCAGGCAGGTAGTTATAT 60.105 40.000 3.25 0.00 0.00 0.86
2204 2260 4.224147 TGTTCTTGCAGGCAGGTAGTTATA 59.776 41.667 3.25 0.00 0.00 0.98
2205 2261 3.009033 TGTTCTTGCAGGCAGGTAGTTAT 59.991 43.478 3.25 0.00 0.00 1.89
2206 2262 2.370519 TGTTCTTGCAGGCAGGTAGTTA 59.629 45.455 3.25 0.00 0.00 2.24
2207 2263 1.142870 TGTTCTTGCAGGCAGGTAGTT 59.857 47.619 3.25 0.00 0.00 2.24
2208 2264 0.764890 TGTTCTTGCAGGCAGGTAGT 59.235 50.000 3.25 0.00 0.00 2.73
2209 2265 1.741706 CATGTTCTTGCAGGCAGGTAG 59.258 52.381 3.25 0.00 0.00 3.18
2210 2266 1.350684 TCATGTTCTTGCAGGCAGGTA 59.649 47.619 3.25 0.00 0.00 3.08
2211 2267 0.111061 TCATGTTCTTGCAGGCAGGT 59.889 50.000 3.25 0.00 0.00 4.00
2212 2268 1.471119 ATCATGTTCTTGCAGGCAGG 58.529 50.000 0.00 0.00 0.00 4.85
2213 2269 3.011818 TGTATCATGTTCTTGCAGGCAG 58.988 45.455 0.00 0.00 0.00 4.85
2214 2270 3.011818 CTGTATCATGTTCTTGCAGGCA 58.988 45.455 0.00 0.00 0.00 4.75
2215 2271 2.357009 CCTGTATCATGTTCTTGCAGGC 59.643 50.000 10.10 0.00 36.12 4.85
2216 2272 3.376234 CACCTGTATCATGTTCTTGCAGG 59.624 47.826 16.64 16.64 45.26 4.85
2217 2273 4.005650 ACACCTGTATCATGTTCTTGCAG 58.994 43.478 0.00 0.00 0.00 4.41
2218 2274 3.752747 CACACCTGTATCATGTTCTTGCA 59.247 43.478 0.00 0.00 0.00 4.08
2219 2275 3.127548 CCACACCTGTATCATGTTCTTGC 59.872 47.826 0.00 0.00 0.00 4.01
2220 2276 4.154737 CACCACACCTGTATCATGTTCTTG 59.845 45.833 0.00 0.00 0.00 3.02
2221 2277 4.326826 CACCACACCTGTATCATGTTCTT 58.673 43.478 0.00 0.00 0.00 2.52
2222 2278 3.307691 CCACCACACCTGTATCATGTTCT 60.308 47.826 0.00 0.00 0.00 3.01
2223 2279 3.009723 CCACCACACCTGTATCATGTTC 58.990 50.000 0.00 0.00 0.00 3.18
2224 2280 2.375174 ACCACCACACCTGTATCATGTT 59.625 45.455 0.00 0.00 0.00 2.71
2225 2281 1.985159 ACCACCACACCTGTATCATGT 59.015 47.619 0.00 0.00 0.00 3.21
2226 2282 2.027285 TGACCACCACACCTGTATCATG 60.027 50.000 0.00 0.00 0.00 3.07
2227 2283 2.027192 GTGACCACCACACCTGTATCAT 60.027 50.000 0.00 0.00 45.03 2.45
2228 2284 1.346395 GTGACCACCACACCTGTATCA 59.654 52.381 0.00 0.00 45.03 2.15
2229 2285 2.094762 GTGACCACCACACCTGTATC 57.905 55.000 0.00 0.00 45.03 2.24
2238 2294 2.679837 CAGCATAATCAGTGACCACCAC 59.320 50.000 0.00 0.00 46.03 4.16
2239 2295 2.940971 GCAGCATAATCAGTGACCACCA 60.941 50.000 0.00 0.00 0.00 4.17
2240 2296 1.672881 GCAGCATAATCAGTGACCACC 59.327 52.381 0.00 0.00 0.00 4.61
2241 2297 2.358957 TGCAGCATAATCAGTGACCAC 58.641 47.619 0.00 0.00 0.00 4.16
2242 2298 2.785540 TGCAGCATAATCAGTGACCA 57.214 45.000 0.00 0.00 0.00 4.02
2243 2299 4.142315 ACATTTGCAGCATAATCAGTGACC 60.142 41.667 0.00 0.00 0.00 4.02
2244 2300 4.990257 ACATTTGCAGCATAATCAGTGAC 58.010 39.130 0.00 0.00 0.00 3.67
2245 2301 5.648178 AACATTTGCAGCATAATCAGTGA 57.352 34.783 0.00 0.00 0.00 3.41
2246 2302 5.062934 CCAAACATTTGCAGCATAATCAGTG 59.937 40.000 0.00 0.00 36.86 3.66
2247 2303 5.172934 CCAAACATTTGCAGCATAATCAGT 58.827 37.500 0.00 0.00 36.86 3.41
2248 2304 5.172934 ACCAAACATTTGCAGCATAATCAG 58.827 37.500 0.00 0.00 36.86 2.90
2249 2305 5.149973 ACCAAACATTTGCAGCATAATCA 57.850 34.783 0.00 0.00 36.86 2.57
2250 2306 7.593875 TTAACCAAACATTTGCAGCATAATC 57.406 32.000 0.00 0.00 36.86 1.75
2251 2307 7.976135 TTTAACCAAACATTTGCAGCATAAT 57.024 28.000 0.00 0.00 36.86 1.28
2252 2308 7.572724 GCATTTAACCAAACATTTGCAGCATAA 60.573 33.333 0.00 0.00 36.86 1.90
2253 2309 6.128336 GCATTTAACCAAACATTTGCAGCATA 60.128 34.615 0.00 0.00 36.86 3.14
2254 2310 5.335035 GCATTTAACCAAACATTTGCAGCAT 60.335 36.000 0.00 0.00 36.86 3.79
2263 2319 5.062528 CCACCAAAGCATTTAACCAAACAT 58.937 37.500 0.00 0.00 35.03 2.71
2273 2329 1.761784 TCACAAGCCACCAAAGCATTT 59.238 42.857 0.00 0.00 40.26 2.32
2274 2330 1.412079 TCACAAGCCACCAAAGCATT 58.588 45.000 0.00 0.00 0.00 3.56
2275 2331 1.274167 CATCACAAGCCACCAAAGCAT 59.726 47.619 0.00 0.00 0.00 3.79
2278 2334 1.955778 TCACATCACAAGCCACCAAAG 59.044 47.619 0.00 0.00 0.00 2.77
2281 2337 1.887854 CAATCACATCACAAGCCACCA 59.112 47.619 0.00 0.00 0.00 4.17
2283 2339 2.294233 ACACAATCACATCACAAGCCAC 59.706 45.455 0.00 0.00 0.00 5.01
2294 2350 2.884012 GGTGGATGAACACACAATCACA 59.116 45.455 0.00 0.00 43.08 3.58
2295 2351 3.058016 CAGGTGGATGAACACACAATCAC 60.058 47.826 0.00 0.00 43.08 3.06
2296 2352 3.148412 CAGGTGGATGAACACACAATCA 58.852 45.455 0.00 0.00 43.08 2.57
2297 2353 3.189287 GTCAGGTGGATGAACACACAATC 59.811 47.826 0.00 0.00 43.08 2.67
2298 2354 3.149196 GTCAGGTGGATGAACACACAAT 58.851 45.455 0.00 0.00 43.08 2.71
2300 2356 1.540146 CGTCAGGTGGATGAACACACA 60.540 52.381 0.00 0.00 43.08 3.72
2301 2357 1.148310 CGTCAGGTGGATGAACACAC 58.852 55.000 0.00 0.00 43.08 3.82
2302 2358 1.044611 TCGTCAGGTGGATGAACACA 58.955 50.000 0.00 0.00 43.08 3.72
2303 2359 2.163818 TTCGTCAGGTGGATGAACAC 57.836 50.000 0.00 0.00 44.58 3.32
2316 2372 1.125270 CGAATCGTGTGTGTTCGTCA 58.875 50.000 0.00 0.00 39.70 4.35
2334 2390 4.627611 ATTCTGGAATTGATTGACAGCG 57.372 40.909 0.00 0.00 0.00 5.18
2335 2391 7.542025 AGTAAATTCTGGAATTGATTGACAGC 58.458 34.615 9.00 0.00 40.57 4.40
2336 2392 9.350357 CAAGTAAATTCTGGAATTGATTGACAG 57.650 33.333 9.00 0.00 40.57 3.51
2337 2393 8.306038 CCAAGTAAATTCTGGAATTGATTGACA 58.694 33.333 18.76 0.00 40.57 3.58
2338 2394 8.306761 ACCAAGTAAATTCTGGAATTGATTGAC 58.693 33.333 18.76 10.44 40.57 3.18
2339 2395 8.421249 ACCAAGTAAATTCTGGAATTGATTGA 57.579 30.769 18.76 2.68 40.57 2.57
2360 2416 6.460399 GCCACAAACACTCATAGTTTAACCAA 60.460 38.462 0.00 0.00 37.10 3.67
2363 2419 5.240844 AGGCCACAAACACTCATAGTTTAAC 59.759 40.000 5.01 0.00 37.10 2.01
2365 2421 4.980573 AGGCCACAAACACTCATAGTTTA 58.019 39.130 5.01 0.00 37.10 2.01
2366 2422 3.832527 AGGCCACAAACACTCATAGTTT 58.167 40.909 5.01 0.00 39.61 2.66
2371 2427 2.362077 GTTCAAGGCCACAAACACTCAT 59.638 45.455 5.01 0.00 0.00 2.90
2373 2429 2.024414 AGTTCAAGGCCACAAACACTC 58.976 47.619 5.01 0.00 0.00 3.51
2374 2430 1.750778 CAGTTCAAGGCCACAAACACT 59.249 47.619 5.01 0.00 0.00 3.55
2376 2432 1.476085 CACAGTTCAAGGCCACAAACA 59.524 47.619 5.01 0.00 0.00 2.83
2379 2435 0.033601 ACCACAGTTCAAGGCCACAA 60.034 50.000 5.01 0.00 0.00 3.33
2380 2436 0.033601 AACCACAGTTCAAGGCCACA 60.034 50.000 5.01 0.00 0.00 4.17
2381 2437 1.111277 AAACCACAGTTCAAGGCCAC 58.889 50.000 5.01 0.00 34.19 5.01
2382 2438 1.480137 CAAAACCACAGTTCAAGGCCA 59.520 47.619 5.01 0.00 34.19 5.36
2383 2439 1.480545 ACAAAACCACAGTTCAAGGCC 59.519 47.619 0.00 0.00 34.19 5.19
2384 2440 2.094234 ACACAAAACCACAGTTCAAGGC 60.094 45.455 0.00 0.00 34.19 4.35
2385 2441 3.866883 ACACAAAACCACAGTTCAAGG 57.133 42.857 0.00 0.00 34.19 3.61
2386 2442 4.987912 ACAAACACAAAACCACAGTTCAAG 59.012 37.500 0.00 0.00 34.19 3.02
2387 2443 4.747108 CACAAACACAAAACCACAGTTCAA 59.253 37.500 0.00 0.00 34.19 2.69
2388 2444 4.038042 TCACAAACACAAAACCACAGTTCA 59.962 37.500 0.00 0.00 34.19 3.18
2389 2445 4.384547 GTCACAAACACAAAACCACAGTTC 59.615 41.667 0.00 0.00 34.19 3.01
2390 2446 4.303282 GTCACAAACACAAAACCACAGTT 58.697 39.130 0.00 0.00 38.03 3.16
2391 2447 3.305744 GGTCACAAACACAAAACCACAGT 60.306 43.478 0.00 0.00 0.00 3.55
2392 2448 3.056891 AGGTCACAAACACAAAACCACAG 60.057 43.478 0.00 0.00 0.00 3.66
2393 2449 2.894126 AGGTCACAAACACAAAACCACA 59.106 40.909 0.00 0.00 0.00 4.17
2394 2450 3.249917 CAGGTCACAAACACAAAACCAC 58.750 45.455 0.00 0.00 0.00 4.16
2395 2451 2.894126 ACAGGTCACAAACACAAAACCA 59.106 40.909 0.00 0.00 0.00 3.67
2396 2452 3.586100 ACAGGTCACAAACACAAAACC 57.414 42.857 0.00 0.00 0.00 3.27
2397 2453 4.805219 AGAACAGGTCACAAACACAAAAC 58.195 39.130 0.00 0.00 0.00 2.43
2398 2454 4.520874 TGAGAACAGGTCACAAACACAAAA 59.479 37.500 0.00 0.00 0.00 2.44
2410 2466 2.607187 CGGTGTACATGAGAACAGGTC 58.393 52.381 0.00 0.00 41.33 3.85
2431 2487 1.574428 CTAATGGCGGCGGTAATGC 59.426 57.895 9.78 0.00 0.00 3.56
2433 2489 0.884704 CTGCTAATGGCGGCGGTAAT 60.885 55.000 9.78 0.00 45.43 1.89
2435 2491 1.962321 TTCTGCTAATGGCGGCGGTA 61.962 55.000 9.78 0.00 46.32 4.02
2436 2492 2.813226 TTTCTGCTAATGGCGGCGGT 62.813 55.000 9.78 0.00 46.32 5.68
2451 2507 7.707624 TTATCAACTTGGATTCTGCATTTCT 57.292 32.000 0.00 0.00 0.00 2.52
2452 2508 7.437267 CCATTATCAACTTGGATTCTGCATTTC 59.563 37.037 0.00 0.00 31.94 2.17
2453 2509 7.093201 ACCATTATCAACTTGGATTCTGCATTT 60.093 33.333 0.00 0.00 34.52 2.32
2454 2510 6.381994 ACCATTATCAACTTGGATTCTGCATT 59.618 34.615 0.00 0.00 34.52 3.56
2455 2511 5.895534 ACCATTATCAACTTGGATTCTGCAT 59.104 36.000 0.00 0.00 34.52 3.96
2456 2512 5.263599 ACCATTATCAACTTGGATTCTGCA 58.736 37.500 0.00 0.00 34.52 4.41
2457 2513 5.841957 ACCATTATCAACTTGGATTCTGC 57.158 39.130 0.00 0.00 34.52 4.26
2459 2515 6.947733 TCACAACCATTATCAACTTGGATTCT 59.052 34.615 0.00 0.00 34.52 2.40
2461 2517 6.947733 TCTCACAACCATTATCAACTTGGATT 59.052 34.615 0.00 0.00 34.52 3.01
2462 2518 6.484288 TCTCACAACCATTATCAACTTGGAT 58.516 36.000 0.00 0.00 34.52 3.41
2463 2519 5.875224 TCTCACAACCATTATCAACTTGGA 58.125 37.500 0.00 0.00 34.52 3.53
2505 2656 3.499563 CCCCTCCCAGTATTCAACACAAA 60.500 47.826 0.00 0.00 0.00 2.83
2511 2662 2.135189 CCATCCCCTCCCAGTATTCAA 58.865 52.381 0.00 0.00 0.00 2.69
2533 2684 6.550854 ACTTGAAATCTGAGGTTTGAATCCAA 59.449 34.615 0.00 0.00 0.00 3.53
2543 2694 5.305585 TCGCTTTTACTTGAAATCTGAGGT 58.694 37.500 0.00 0.00 0.00 3.85
2545 2696 7.301068 AGATCGCTTTTACTTGAAATCTGAG 57.699 36.000 0.00 0.00 0.00 3.35
2555 2706 7.201705 GGGTGCTTAATTAGATCGCTTTTACTT 60.202 37.037 0.00 0.00 0.00 2.24
2561 2712 3.477530 GGGGTGCTTAATTAGATCGCTT 58.522 45.455 0.00 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.