Multiple sequence alignment - TraesCS7A01G065300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G065300 chr7A 100.000 1674 0 0 588 2261 32586343 32588016 0.000000e+00 3092.0
1 TraesCS7A01G065300 chr7A 92.905 451 31 1 820 1269 32530916 32531366 0.000000e+00 654.0
2 TraesCS7A01G065300 chr7A 100.000 283 0 0 1 283 32585756 32586038 7.160000e-145 523.0
3 TraesCS7A01G065300 chr7A 96.708 243 8 0 993 1235 32528897 32529139 2.700000e-109 405.0
4 TraesCS7A01G065300 chr7A 98.235 170 3 0 1269 1438 32573091 32573260 4.720000e-77 298.0
5 TraesCS7A01G065300 chr7A 98.235 170 3 0 1269 1438 86009994 86010163 4.720000e-77 298.0
6 TraesCS7A01G065300 chr7A 96.512 86 3 0 752 837 32530818 32530903 2.340000e-30 143.0
7 TraesCS7A01G065300 chr7A 82.558 86 15 0 1443 1528 26061909 26061824 2.410000e-10 76.8
8 TraesCS7A01G065300 chr1A 90.970 742 47 7 1529 2256 184933716 184934451 0.000000e+00 981.0
9 TraesCS7A01G065300 chr1A 98.235 170 3 0 1269 1438 39690296 39690465 4.720000e-77 298.0
10 TraesCS7A01G065300 chr1A 98.235 170 3 0 1269 1438 78192597 78192766 4.720000e-77 298.0
11 TraesCS7A01G065300 chr1A 83.436 163 24 3 1588 1749 172182401 172182241 5.030000e-32 148.0
12 TraesCS7A01G065300 chrUn 90.654 749 50 7 1525 2259 259653290 259654032 0.000000e+00 977.0
13 TraesCS7A01G065300 chrUn 89.928 417 22 7 1794 2196 477614740 477615150 9.260000e-144 520.0
14 TraesCS7A01G065300 chrUn 98.235 170 3 0 1269 1438 74582006 74581837 4.720000e-77 298.0
15 TraesCS7A01G065300 chr7B 90.361 747 52 7 1527 2259 574513599 574512859 0.000000e+00 963.0
16 TraesCS7A01G065300 chr6B 89.530 745 54 8 1528 2258 610808586 610807852 0.000000e+00 922.0
17 TraesCS7A01G065300 chr7D 90.150 467 29 7 820 1269 32332342 32332808 1.930000e-165 592.0
18 TraesCS7A01G065300 chr7D 96.250 240 9 0 996 1235 32330315 32330554 5.850000e-106 394.0
19 TraesCS7A01G065300 chr7D 87.054 224 29 0 1013 1236 12546861 12546638 1.040000e-63 254.0
20 TraesCS7A01G065300 chr7D 94.286 70 4 0 752 821 32332243 32332312 8.540000e-20 108.0
21 TraesCS7A01G065300 chr4A 98.824 170 2 0 1269 1438 454884861 454885030 1.010000e-78 303.0
22 TraesCS7A01G065300 chr6A 98.235 170 3 0 1269 1438 187936042 187935873 4.720000e-77 298.0
23 TraesCS7A01G065300 chr5A 98.235 170 3 0 1269 1438 372064260 372064091 4.720000e-77 298.0
24 TraesCS7A01G065300 chr5A 96.111 180 7 0 1269 1448 700493960 700493781 6.110000e-76 294.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G065300 chr7A 32585756 32588016 2260 False 1807.500000 3092 100.000 1 2261 2 chr7A.!!$F4 2260
1 TraesCS7A01G065300 chr7A 32528897 32531366 2469 False 400.666667 654 95.375 752 1269 3 chr7A.!!$F3 517
2 TraesCS7A01G065300 chr1A 184933716 184934451 735 False 981.000000 981 90.970 1529 2256 1 chr1A.!!$F3 727
3 TraesCS7A01G065300 chrUn 259653290 259654032 742 False 977.000000 977 90.654 1525 2259 1 chrUn.!!$F1 734
4 TraesCS7A01G065300 chr7B 574512859 574513599 740 True 963.000000 963 90.361 1527 2259 1 chr7B.!!$R1 732
5 TraesCS7A01G065300 chr6B 610807852 610808586 734 True 922.000000 922 89.530 1528 2258 1 chr6B.!!$R1 730
6 TraesCS7A01G065300 chr7D 32330315 32332808 2493 False 364.666667 592 93.562 752 1269 3 chr7D.!!$F1 517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
988 2220 0.172803 AGAAGCTAGTAACCACGGCG 59.827 55.0 4.8 4.8 34.83 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1918 3167 2.632512 GGAAGATTGGCTTTTGGGTCAA 59.367 45.455 0.0 0.0 36.83 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.913777 TCATCACCGTCTCGTACTTG 57.086 50.000 0.00 0.00 0.00 3.16
21 22 2.156917 TCATCACCGTCTCGTACTTGT 58.843 47.619 0.00 0.00 0.00 3.16
25 26 1.201647 CACCGTCTCGTACTTGTGGAT 59.798 52.381 0.00 0.00 0.00 3.41
26 27 1.201647 ACCGTCTCGTACTTGTGGATG 59.798 52.381 0.00 0.00 0.00 3.51
27 28 1.469251 CCGTCTCGTACTTGTGGATGG 60.469 57.143 0.00 0.00 0.00 3.51
28 29 1.471287 CGTCTCGTACTTGTGGATGGA 59.529 52.381 0.00 0.00 0.00 3.41
29 30 2.099263 CGTCTCGTACTTGTGGATGGAT 59.901 50.000 0.00 0.00 0.00 3.41
30 31 3.707793 GTCTCGTACTTGTGGATGGATC 58.292 50.000 0.00 0.00 0.00 3.36
31 32 3.130516 GTCTCGTACTTGTGGATGGATCA 59.869 47.826 0.00 0.00 0.00 2.92
32 33 3.960755 TCTCGTACTTGTGGATGGATCAT 59.039 43.478 0.00 0.00 0.00 2.45
34 35 5.775195 TCTCGTACTTGTGGATGGATCATAT 59.225 40.000 0.00 0.00 0.00 1.78
35 36 6.946009 TCTCGTACTTGTGGATGGATCATATA 59.054 38.462 0.00 0.00 0.00 0.86
36 37 7.615757 TCTCGTACTTGTGGATGGATCATATAT 59.384 37.037 0.00 0.00 0.00 0.86
37 38 8.134202 TCGTACTTGTGGATGGATCATATATT 57.866 34.615 0.00 0.00 0.00 1.28
38 39 8.593679 TCGTACTTGTGGATGGATCATATATTT 58.406 33.333 0.00 0.00 0.00 1.40
39 40 9.869757 CGTACTTGTGGATGGATCATATATTTA 57.130 33.333 0.00 0.00 0.00 1.40
65 66 8.530269 TTACGAGATTAAGAAAGGAGTTTCAC 57.470 34.615 0.00 0.00 44.08 3.18
66 67 6.760291 ACGAGATTAAGAAAGGAGTTTCACT 58.240 36.000 0.00 0.00 44.08 3.41
67 68 7.893658 ACGAGATTAAGAAAGGAGTTTCACTA 58.106 34.615 0.00 0.00 44.08 2.74
68 69 8.030106 ACGAGATTAAGAAAGGAGTTTCACTAG 58.970 37.037 0.00 0.00 44.08 2.57
69 70 8.244802 CGAGATTAAGAAAGGAGTTTCACTAGA 58.755 37.037 0.00 0.00 44.08 2.43
76 77 9.579932 AAGAAAGGAGTTTCACTAGATTTTGAT 57.420 29.630 0.00 0.00 44.08 2.57
78 79 7.693969 AAGGAGTTTCACTAGATTTTGATGG 57.306 36.000 0.00 0.00 0.00 3.51
79 80 7.020827 AGGAGTTTCACTAGATTTTGATGGA 57.979 36.000 0.00 0.00 0.00 3.41
81 82 8.112183 AGGAGTTTCACTAGATTTTGATGGAAT 58.888 33.333 0.00 0.00 0.00 3.01
82 83 9.396022 GGAGTTTCACTAGATTTTGATGGAATA 57.604 33.333 0.00 0.00 0.00 1.75
125 126 9.475620 AGGTTTCTAAAGAAAAGGAGAGAAAAA 57.524 29.630 6.72 0.00 44.58 1.94
133 134 5.363580 AGAAAAGGAGAGAAAAATGTTGGCA 59.636 36.000 0.00 0.00 0.00 4.92
137 138 3.311966 GAGAGAAAAATGTTGGCACTGC 58.688 45.455 0.00 0.00 0.00 4.40
138 139 2.053627 GAGAAAAATGTTGGCACTGCG 58.946 47.619 0.00 0.00 0.00 5.18
139 140 1.408702 AGAAAAATGTTGGCACTGCGT 59.591 42.857 0.00 0.00 0.00 5.24
140 141 2.159114 AGAAAAATGTTGGCACTGCGTT 60.159 40.909 0.00 0.00 0.00 4.84
141 142 1.851658 AAAATGTTGGCACTGCGTTC 58.148 45.000 0.00 0.00 0.00 3.95
142 143 1.032014 AAATGTTGGCACTGCGTTCT 58.968 45.000 0.00 0.00 0.00 3.01
144 145 1.518056 ATGTTGGCACTGCGTTCTGG 61.518 55.000 0.00 0.00 0.00 3.86
145 146 2.186826 GTTGGCACTGCGTTCTGGT 61.187 57.895 0.00 0.00 0.00 4.00
147 148 3.050275 GGCACTGCGTTCTGGTCC 61.050 66.667 0.00 0.00 0.00 4.46
150 151 4.681978 ACTGCGTTCTGGTCCGGC 62.682 66.667 0.00 0.00 0.00 6.13
155 156 2.348888 CGTTCTGGTCCGGCCTAGT 61.349 63.158 14.76 0.00 38.35 2.57
156 157 1.885163 CGTTCTGGTCCGGCCTAGTT 61.885 60.000 14.76 0.00 38.35 2.24
157 158 1.188863 GTTCTGGTCCGGCCTAGTTA 58.811 55.000 14.76 0.00 38.35 2.24
160 161 2.259012 TCTGGTCCGGCCTAGTTAAAA 58.741 47.619 14.76 0.00 38.35 1.52
161 162 2.027837 TCTGGTCCGGCCTAGTTAAAAC 60.028 50.000 14.76 0.00 38.35 2.43
162 163 1.338011 TGGTCCGGCCTAGTTAAAACG 60.338 52.381 14.76 0.00 38.35 3.60
163 164 1.066929 GGTCCGGCCTAGTTAAAACGA 60.067 52.381 0.00 0.00 0.00 3.85
164 165 1.995484 GTCCGGCCTAGTTAAAACGAC 59.005 52.381 0.00 0.00 0.00 4.34
165 166 1.895131 TCCGGCCTAGTTAAAACGACT 59.105 47.619 0.00 0.00 0.00 4.18
168 169 2.265683 GGCCTAGTTAAAACGACTCGG 58.734 52.381 2.98 0.00 34.15 4.63
171 172 1.916000 CTAGTTAAAACGACTCGGCGG 59.084 52.381 7.21 0.00 35.12 6.13
172 173 0.668401 AGTTAAAACGACTCGGCGGG 60.668 55.000 4.58 4.58 35.12 6.13
174 175 2.784889 TTAAAACGACTCGGCGGGGG 62.785 60.000 13.20 4.91 35.12 5.40
182 183 4.954118 TCGGCGGGGGAGGCATAT 62.954 66.667 7.21 0.00 36.37 1.78
184 185 2.520968 GGCGGGGGAGGCATATTT 59.479 61.111 0.00 0.00 36.61 1.40
185 186 1.765074 GGCGGGGGAGGCATATTTA 59.235 57.895 0.00 0.00 36.61 1.40
186 187 0.322546 GGCGGGGGAGGCATATTTAG 60.323 60.000 0.00 0.00 36.61 1.85
201 202 6.307155 GCATATTTAGCCAATACGCTTACAG 58.693 40.000 0.00 0.00 40.39 2.74
202 203 6.073222 GCATATTTAGCCAATACGCTTACAGT 60.073 38.462 0.00 0.00 40.39 3.55
203 204 7.519970 GCATATTTAGCCAATACGCTTACAGTT 60.520 37.037 0.00 0.00 40.39 3.16
204 205 5.789710 TTTAGCCAATACGCTTACAGTTC 57.210 39.130 0.00 0.00 40.39 3.01
205 206 2.268298 AGCCAATACGCTTACAGTTCG 58.732 47.619 0.00 0.00 34.73 3.95
210 211 4.191485 CGCTTACAGTTCGCGCGG 62.191 66.667 31.69 16.53 40.42 6.46
212 213 2.431942 CTTACAGTTCGCGCGGGT 60.432 61.111 31.69 23.43 0.00 5.28
213 214 2.025418 CTTACAGTTCGCGCGGGTT 61.025 57.895 31.69 12.64 0.00 4.11
214 215 1.562575 CTTACAGTTCGCGCGGGTTT 61.563 55.000 31.69 13.25 0.00 3.27
215 216 1.159098 TTACAGTTCGCGCGGGTTTT 61.159 50.000 31.69 14.38 0.00 2.43
216 217 1.833434 TACAGTTCGCGCGGGTTTTG 61.833 55.000 31.69 21.69 0.00 2.44
218 219 4.322385 GTTCGCGCGGGTTTTGCT 62.322 61.111 31.69 0.00 0.00 3.91
219 220 2.665520 TTCGCGCGGGTTTTGCTA 60.666 55.556 31.69 3.44 0.00 3.49
220 221 2.252346 TTCGCGCGGGTTTTGCTAA 61.252 52.632 31.69 10.58 0.00 3.09
221 222 1.783031 TTCGCGCGGGTTTTGCTAAA 61.783 50.000 31.69 9.75 0.00 1.85
223 224 0.935366 CGCGCGGGTTTTGCTAAAAA 60.935 50.000 24.84 0.00 32.82 1.94
224 225 1.424403 GCGCGGGTTTTGCTAAAAAT 58.576 45.000 8.83 0.00 37.59 1.82
226 227 2.987821 GCGCGGGTTTTGCTAAAAATAA 59.012 40.909 8.83 0.00 37.59 1.40
227 228 3.615056 GCGCGGGTTTTGCTAAAAATAAT 59.385 39.130 8.83 0.00 37.59 1.28
228 229 4.092237 GCGCGGGTTTTGCTAAAAATAATT 59.908 37.500 8.83 0.00 37.59 1.40
231 232 5.639931 GCGGGTTTTGCTAAAAATAATTCCA 59.360 36.000 0.00 0.00 37.59 3.53
232 233 6.147985 GCGGGTTTTGCTAAAAATAATTCCAA 59.852 34.615 0.00 0.00 37.59 3.53
233 234 7.148323 GCGGGTTTTGCTAAAAATAATTCCAAT 60.148 33.333 0.00 0.00 37.59 3.16
234 235 8.387354 CGGGTTTTGCTAAAAATAATTCCAATC 58.613 33.333 0.00 0.00 37.59 2.67
235 236 9.448438 GGGTTTTGCTAAAAATAATTCCAATCT 57.552 29.630 0.00 0.00 37.59 2.40
261 262 3.853475 TCGTAAGAAAATCCTTCGGGAC 58.147 45.455 0.00 0.00 46.47 4.46
262 263 3.258872 TCGTAAGAAAATCCTTCGGGACA 59.741 43.478 0.00 0.00 46.47 4.02
263 264 3.998341 CGTAAGAAAATCCTTCGGGACAA 59.002 43.478 0.00 0.00 44.59 3.18
264 265 4.453136 CGTAAGAAAATCCTTCGGGACAAA 59.547 41.667 0.00 0.00 44.59 2.83
265 266 5.049267 CGTAAGAAAATCCTTCGGGACAAAA 60.049 40.000 0.00 0.00 44.59 2.44
266 267 6.513720 CGTAAGAAAATCCTTCGGGACAAAAA 60.514 38.462 0.00 0.00 44.59 1.94
267 268 7.786926 CGTAAGAAAATCCTTCGGGACAAAAAT 60.787 37.037 0.00 0.00 44.59 1.82
271 272 3.713826 TCCTTCGGGACAAAAATAGCT 57.286 42.857 0.00 0.00 39.58 3.32
275 276 2.343101 TCGGGACAAAAATAGCTCACG 58.657 47.619 0.00 0.00 0.00 4.35
277 278 1.132453 GGGACAAAAATAGCTCACGGC 59.868 52.381 0.00 0.00 42.19 5.68
630 631 7.874940 TCTCACAAATTATGACACTCAAAAGG 58.125 34.615 0.00 0.00 0.00 3.11
632 633 6.040278 TCACAAATTATGACACTCAAAAGGCA 59.960 34.615 0.00 0.00 0.00 4.75
633 634 6.364165 CACAAATTATGACACTCAAAAGGCAG 59.636 38.462 0.00 0.00 0.00 4.85
634 635 5.649782 AATTATGACACTCAAAAGGCAGG 57.350 39.130 0.00 0.00 0.00 4.85
635 636 2.957402 ATGACACTCAAAAGGCAGGA 57.043 45.000 0.00 0.00 0.00 3.86
637 638 2.575532 TGACACTCAAAAGGCAGGAAG 58.424 47.619 0.00 0.00 0.00 3.46
638 639 2.092429 TGACACTCAAAAGGCAGGAAGT 60.092 45.455 0.00 0.00 0.00 3.01
639 640 3.135712 TGACACTCAAAAGGCAGGAAGTA 59.864 43.478 0.00 0.00 0.00 2.24
641 642 4.137543 ACACTCAAAAGGCAGGAAGTAAG 58.862 43.478 0.00 0.00 0.00 2.34
642 643 3.503748 CACTCAAAAGGCAGGAAGTAAGG 59.496 47.826 0.00 0.00 0.00 2.69
643 644 3.394606 ACTCAAAAGGCAGGAAGTAAGGA 59.605 43.478 0.00 0.00 0.00 3.36
645 646 4.142038 TCAAAAGGCAGGAAGTAAGGAAC 58.858 43.478 0.00 0.00 0.00 3.62
647 648 0.613777 AGGCAGGAAGTAAGGAACCG 59.386 55.000 0.00 0.00 0.00 4.44
648 649 0.611714 GGCAGGAAGTAAGGAACCGA 59.388 55.000 0.00 0.00 0.00 4.69
649 650 1.405661 GGCAGGAAGTAAGGAACCGAG 60.406 57.143 0.00 0.00 0.00 4.63
652 653 3.383825 GCAGGAAGTAAGGAACCGAGATA 59.616 47.826 0.00 0.00 0.00 1.98
655 656 5.302059 CAGGAAGTAAGGAACCGAGATATCA 59.698 44.000 5.32 0.00 0.00 2.15
657 658 7.176865 CAGGAAGTAAGGAACCGAGATATCATA 59.823 40.741 5.32 0.00 0.00 2.15
658 659 7.896496 AGGAAGTAAGGAACCGAGATATCATAT 59.104 37.037 5.32 0.00 0.00 1.78
660 661 7.411486 AGTAAGGAACCGAGATATCATATGG 57.589 40.000 5.32 3.46 0.00 2.74
661 662 4.744795 AGGAACCGAGATATCATATGGC 57.255 45.455 5.32 0.00 0.00 4.40
662 663 4.096681 AGGAACCGAGATATCATATGGCA 58.903 43.478 5.32 0.00 0.00 4.92
663 664 4.718774 AGGAACCGAGATATCATATGGCAT 59.281 41.667 4.88 4.88 0.00 4.40
665 666 6.556495 AGGAACCGAGATATCATATGGCATAT 59.444 38.462 14.20 14.20 0.00 1.78
667 668 8.367911 GGAACCGAGATATCATATGGCATATAA 58.632 37.037 19.09 6.21 0.00 0.98
668 669 9.935241 GAACCGAGATATCATATGGCATATAAT 57.065 33.333 19.09 13.48 0.00 1.28
669 670 9.716531 AACCGAGATATCATATGGCATATAATG 57.283 33.333 19.09 10.67 0.00 1.90
671 672 8.316946 CCGAGATATCATATGGCATATAATGGT 58.683 37.037 19.09 9.44 0.00 3.55
672 673 9.148104 CGAGATATCATATGGCATATAATGGTG 57.852 37.037 19.09 8.27 0.00 4.17
673 674 9.445878 GAGATATCATATGGCATATAATGGTGG 57.554 37.037 19.09 6.10 0.00 4.61
674 675 8.952602 AGATATCATATGGCATATAATGGTGGT 58.047 33.333 19.09 7.06 0.00 4.16
675 676 8.929260 ATATCATATGGCATATAATGGTGGTG 57.071 34.615 19.09 6.19 0.00 4.17
676 677 6.385766 TCATATGGCATATAATGGTGGTGA 57.614 37.500 19.09 8.39 0.00 4.02
677 678 6.972490 TCATATGGCATATAATGGTGGTGAT 58.028 36.000 19.09 0.00 0.00 3.06
678 679 7.056006 TCATATGGCATATAATGGTGGTGATC 58.944 38.462 19.09 0.00 0.00 2.92
679 680 4.999469 TGGCATATAATGGTGGTGATCT 57.001 40.909 0.00 0.00 0.00 2.75
682 683 5.163109 TGGCATATAATGGTGGTGATCTTCA 60.163 40.000 0.00 0.00 0.00 3.02
683 684 5.769662 GGCATATAATGGTGGTGATCTTCAA 59.230 40.000 0.00 0.00 0.00 2.69
685 686 7.310664 GCATATAATGGTGGTGATCTTCAATG 58.689 38.462 0.00 0.00 0.00 2.82
686 687 7.576287 GCATATAATGGTGGTGATCTTCAATGG 60.576 40.741 0.00 0.00 0.00 3.16
687 688 4.320546 AATGGTGGTGATCTTCAATGGA 57.679 40.909 0.00 0.00 0.00 3.41
688 689 3.805066 TGGTGGTGATCTTCAATGGAA 57.195 42.857 0.00 0.00 0.00 3.53
707 708 2.869646 CATCCACGTGCGCATGTT 59.130 55.556 31.81 15.97 0.00 2.71
708 709 1.512522 CATCCACGTGCGCATGTTG 60.513 57.895 31.81 27.55 0.00 3.33
710 711 1.911293 ATCCACGTGCGCATGTTGAC 61.911 55.000 31.63 10.75 0.00 3.18
711 712 2.127270 CACGTGCGCATGTTGACC 60.127 61.111 31.81 7.22 0.00 4.02
712 713 2.590291 ACGTGCGCATGTTGACCA 60.590 55.556 29.03 0.00 0.00 4.02
713 714 2.174107 CGTGCGCATGTTGACCAG 59.826 61.111 21.57 0.00 0.00 4.00
714 715 2.316867 CGTGCGCATGTTGACCAGA 61.317 57.895 21.57 0.00 0.00 3.86
715 716 1.840630 CGTGCGCATGTTGACCAGAA 61.841 55.000 21.57 0.00 0.00 3.02
716 717 0.385974 GTGCGCATGTTGACCAGAAC 60.386 55.000 15.91 0.00 0.00 3.01
717 718 0.817229 TGCGCATGTTGACCAGAACA 60.817 50.000 5.66 0.00 40.08 3.18
718 719 0.385974 GCGCATGTTGACCAGAACAC 60.386 55.000 0.30 0.00 38.64 3.32
719 720 1.229428 CGCATGTTGACCAGAACACT 58.771 50.000 0.00 0.00 38.64 3.55
720 721 1.069703 CGCATGTTGACCAGAACACTG 60.070 52.381 0.00 0.00 38.64 3.66
721 722 2.221169 GCATGTTGACCAGAACACTGA 58.779 47.619 0.00 0.00 38.64 3.41
724 725 1.478916 TGTTGACCAGAACACTGACGA 59.521 47.619 0.00 0.00 33.94 4.20
725 726 2.102420 TGTTGACCAGAACACTGACGAT 59.898 45.455 0.00 0.00 33.94 3.73
726 727 3.319689 TGTTGACCAGAACACTGACGATA 59.680 43.478 0.00 0.00 33.94 2.92
727 728 4.202172 TGTTGACCAGAACACTGACGATAA 60.202 41.667 0.00 0.00 33.94 1.75
728 729 3.909430 TGACCAGAACACTGACGATAAC 58.091 45.455 0.00 0.00 33.94 1.89
729 730 3.319689 TGACCAGAACACTGACGATAACA 59.680 43.478 0.00 0.00 33.94 2.41
730 731 3.650139 ACCAGAACACTGACGATAACAC 58.350 45.455 0.00 0.00 33.94 3.32
731 732 3.321111 ACCAGAACACTGACGATAACACT 59.679 43.478 0.00 0.00 33.94 3.55
733 734 3.121944 CAGAACACTGACGATAACACTGC 59.878 47.826 0.00 0.00 33.94 4.40
735 736 3.319137 ACACTGACGATAACACTGCAT 57.681 42.857 0.00 0.00 0.00 3.96
737 738 5.011090 ACACTGACGATAACACTGCATAT 57.989 39.130 0.00 0.00 0.00 1.78
738 739 5.419542 ACACTGACGATAACACTGCATATT 58.580 37.500 0.00 0.00 0.00 1.28
741 742 5.520288 ACTGACGATAACACTGCATATTGAC 59.480 40.000 0.00 0.00 0.00 3.18
742 743 4.808895 TGACGATAACACTGCATATTGACC 59.191 41.667 0.00 0.00 0.00 4.02
743 744 3.802139 ACGATAACACTGCATATTGACCG 59.198 43.478 0.00 0.00 0.00 4.79
744 745 3.184379 CGATAACACTGCATATTGACCGG 59.816 47.826 0.00 0.00 0.00 5.28
745 746 1.750193 AACACTGCATATTGACCGGG 58.250 50.000 6.32 0.00 0.00 5.73
747 748 0.747644 CACTGCATATTGACCGGGCA 60.748 55.000 5.41 5.41 0.00 5.36
748 749 0.748005 ACTGCATATTGACCGGGCAC 60.748 55.000 11.33 0.00 0.00 5.01
750 751 0.322906 TGCATATTGACCGGGCACAA 60.323 50.000 11.33 11.77 0.00 3.33
751 752 0.381801 GCATATTGACCGGGCACAAG 59.618 55.000 11.33 0.55 0.00 3.16
752 753 0.381801 CATATTGACCGGGCACAAGC 59.618 55.000 11.33 0.00 41.10 4.01
753 754 0.255890 ATATTGACCGGGCACAAGCT 59.744 50.000 11.33 0.00 41.70 3.74
755 756 2.410322 ATTGACCGGGCACAAGCTCA 62.410 55.000 11.33 0.00 43.19 4.26
756 757 2.743928 GACCGGGCACAAGCTCAG 60.744 66.667 0.00 0.00 43.19 3.35
793 1994 6.795593 GCCGACTTCAGTTTGTTATAAAAGTC 59.204 38.462 11.45 11.45 38.36 3.01
843 2075 2.689983 CAGCCTAAACAATCCATCCACC 59.310 50.000 0.00 0.00 0.00 4.61
865 2097 3.649986 AACGGCGCAACTGCAGTC 61.650 61.111 21.95 7.74 42.49 3.51
881 2113 1.690893 CAGTCGATCCACATCCATCCT 59.309 52.381 0.00 0.00 0.00 3.24
882 2114 1.690893 AGTCGATCCACATCCATCCTG 59.309 52.381 0.00 0.00 0.00 3.86
953 2185 3.250323 CGCTCGCTCACCACGATG 61.250 66.667 0.00 0.00 39.12 3.84
954 2186 2.887568 GCTCGCTCACCACGATGG 60.888 66.667 0.00 0.00 45.02 3.51
956 2188 3.723235 CTCGCTCACCACGATGGGG 62.723 68.421 8.57 4.72 44.11 4.96
985 2217 5.564048 ACTAGAAGAAGCTAGTAACCACG 57.436 43.478 0.00 0.00 46.84 4.94
986 2218 3.870633 AGAAGAAGCTAGTAACCACGG 57.129 47.619 0.00 0.00 0.00 4.94
988 2220 0.172803 AGAAGCTAGTAACCACGGCG 59.827 55.000 4.80 4.80 34.83 6.46
989 2221 0.804933 GAAGCTAGTAACCACGGCGG 60.805 60.000 13.24 0.00 42.50 6.13
1068 2317 1.503542 CAAGGCCAAGATCACGCAC 59.496 57.895 5.01 0.00 0.00 5.34
1098 2347 3.760035 GAGAAGACGGAGGCGGCA 61.760 66.667 13.08 0.00 0.00 5.69
1242 2491 4.263209 CACAAGCGCGGGCACAAA 62.263 61.111 27.20 0.00 43.41 2.83
1280 2529 2.936919 TGTGAGCCACATTCTGACTT 57.063 45.000 4.16 0.00 39.62 3.01
1281 2530 3.213206 TGTGAGCCACATTCTGACTTT 57.787 42.857 4.16 0.00 39.62 2.66
1282 2531 3.554934 TGTGAGCCACATTCTGACTTTT 58.445 40.909 4.16 0.00 39.62 2.27
1283 2532 3.565482 TGTGAGCCACATTCTGACTTTTC 59.435 43.478 4.16 0.00 39.62 2.29
1284 2533 3.817647 GTGAGCCACATTCTGACTTTTCT 59.182 43.478 1.01 0.00 34.08 2.52
1285 2534 4.997395 GTGAGCCACATTCTGACTTTTCTA 59.003 41.667 1.01 0.00 34.08 2.10
1286 2535 5.121454 GTGAGCCACATTCTGACTTTTCTAG 59.879 44.000 1.01 0.00 34.08 2.43
1287 2536 4.583871 AGCCACATTCTGACTTTTCTAGG 58.416 43.478 0.00 0.00 0.00 3.02
1288 2537 4.287067 AGCCACATTCTGACTTTTCTAGGA 59.713 41.667 0.00 0.00 0.00 2.94
1289 2538 5.003804 GCCACATTCTGACTTTTCTAGGAA 58.996 41.667 0.00 0.00 0.00 3.36
1290 2539 5.473504 GCCACATTCTGACTTTTCTAGGAAA 59.526 40.000 0.00 0.00 0.00 3.13
1291 2540 6.151817 GCCACATTCTGACTTTTCTAGGAAAT 59.848 38.462 0.00 0.00 0.00 2.17
1292 2541 7.309438 GCCACATTCTGACTTTTCTAGGAAATT 60.309 37.037 0.00 0.00 0.00 1.82
1293 2542 9.231297 CCACATTCTGACTTTTCTAGGAAATTA 57.769 33.333 0.00 0.00 0.00 1.40
1298 2547 8.862325 TCTGACTTTTCTAGGAAATTATTGCA 57.138 30.769 0.00 0.00 0.00 4.08
1299 2548 9.295825 TCTGACTTTTCTAGGAAATTATTGCAA 57.704 29.630 0.00 0.00 0.00 4.08
1300 2549 9.346725 CTGACTTTTCTAGGAAATTATTGCAAC 57.653 33.333 0.00 0.00 0.00 4.17
1301 2550 8.855110 TGACTTTTCTAGGAAATTATTGCAACA 58.145 29.630 0.00 0.00 0.00 3.33
1302 2551 9.346725 GACTTTTCTAGGAAATTATTGCAACAG 57.653 33.333 0.00 0.00 0.00 3.16
1303 2552 7.814587 ACTTTTCTAGGAAATTATTGCAACAGC 59.185 33.333 0.00 0.00 0.00 4.40
1304 2553 5.484173 TCTAGGAAATTATTGCAACAGCG 57.516 39.130 0.00 0.00 0.00 5.18
1305 2554 3.508744 AGGAAATTATTGCAACAGCGG 57.491 42.857 0.00 0.00 0.00 5.52
1306 2555 2.825532 AGGAAATTATTGCAACAGCGGT 59.174 40.909 0.00 0.00 0.00 5.68
1307 2556 4.013728 AGGAAATTATTGCAACAGCGGTA 58.986 39.130 0.00 0.00 0.00 4.02
1308 2557 4.461081 AGGAAATTATTGCAACAGCGGTAA 59.539 37.500 0.00 0.00 0.00 2.85
1309 2558 5.047660 AGGAAATTATTGCAACAGCGGTAAA 60.048 36.000 0.00 0.00 0.00 2.01
1310 2559 5.061684 GGAAATTATTGCAACAGCGGTAAAC 59.938 40.000 0.00 0.00 0.00 2.01
1311 2560 5.385509 AATTATTGCAACAGCGGTAAACT 57.614 34.783 0.00 0.00 0.00 2.66
1312 2561 4.839668 TTATTGCAACAGCGGTAAACTT 57.160 36.364 0.00 0.00 0.00 2.66
1313 2562 3.726291 ATTGCAACAGCGGTAAACTTT 57.274 38.095 0.00 0.00 0.00 2.66
1314 2563 2.766970 TGCAACAGCGGTAAACTTTC 57.233 45.000 0.00 0.00 0.00 2.62
1315 2564 2.294074 TGCAACAGCGGTAAACTTTCT 58.706 42.857 0.00 0.00 0.00 2.52
1316 2565 2.032799 TGCAACAGCGGTAAACTTTCTG 59.967 45.455 0.00 0.00 0.00 3.02
1317 2566 2.032924 GCAACAGCGGTAAACTTTCTGT 59.967 45.455 0.00 0.00 39.42 3.41
1318 2567 3.488553 GCAACAGCGGTAAACTTTCTGTT 60.489 43.478 0.00 0.00 45.53 3.16
1320 2569 4.976224 ACAGCGGTAAACTTTCTGTTTT 57.024 36.364 0.00 0.00 45.69 2.43
1321 2570 4.916870 ACAGCGGTAAACTTTCTGTTTTC 58.083 39.130 0.00 0.00 45.69 2.29
1322 2571 4.396790 ACAGCGGTAAACTTTCTGTTTTCA 59.603 37.500 0.00 0.00 45.69 2.69
1323 2572 5.106078 ACAGCGGTAAACTTTCTGTTTTCAA 60.106 36.000 0.00 0.00 45.69 2.69
1324 2573 5.802956 CAGCGGTAAACTTTCTGTTTTCAAA 59.197 36.000 0.00 0.00 45.69 2.69
1325 2574 5.803461 AGCGGTAAACTTTCTGTTTTCAAAC 59.197 36.000 0.00 0.00 45.69 2.93
1326 2575 5.573669 GCGGTAAACTTTCTGTTTTCAAACA 59.426 36.000 5.05 5.05 45.69 2.83
1341 2590 9.862371 TGTTTTCAAACAACAACATGTATACTT 57.138 25.926 0.00 0.00 45.17 2.24
1343 2592 9.862371 TTTTCAAACAACAACATGTATACTTGT 57.138 25.926 16.47 16.47 36.02 3.16
1346 2595 9.938670 TCAAACAACAACATGTATACTTGTAAC 57.061 29.630 20.98 0.00 34.38 2.50
1347 2596 9.723447 CAAACAACAACATGTATACTTGTAACA 57.277 29.630 20.98 0.00 34.38 2.41
1352 2601 8.433421 ACAACATGTATACTTGTAACATAGGC 57.567 34.615 20.98 0.00 34.38 3.93
1353 2602 8.044309 ACAACATGTATACTTGTAACATAGGCA 58.956 33.333 20.98 0.00 34.38 4.75
1354 2603 9.056005 CAACATGTATACTTGTAACATAGGCAT 57.944 33.333 20.98 3.07 34.38 4.40
1356 2605 9.929180 ACATGTATACTTGTAACATAGGCATAG 57.071 33.333 19.72 0.00 32.70 2.23
1357 2606 9.929180 CATGTATACTTGTAACATAGGCATAGT 57.071 33.333 9.96 0.00 32.70 2.12
1362 2611 9.998106 ATACTTGTAACATAGGCATAGTAAAGG 57.002 33.333 0.00 0.00 0.00 3.11
1363 2612 6.766467 ACTTGTAACATAGGCATAGTAAAGGC 59.234 38.462 0.00 0.00 0.00 4.35
1364 2613 6.494666 TGTAACATAGGCATAGTAAAGGCT 57.505 37.500 7.14 7.14 43.59 4.58
1365 2614 7.606135 TGTAACATAGGCATAGTAAAGGCTA 57.394 36.000 10.38 10.38 45.29 3.93
1367 2616 8.311836 TGTAACATAGGCATAGTAAAGGCTATC 58.688 37.037 15.04 8.16 46.74 2.08
1368 2617 6.935240 ACATAGGCATAGTAAAGGCTATCA 57.065 37.500 15.04 0.00 46.74 2.15
1369 2618 7.316393 ACATAGGCATAGTAAAGGCTATCAA 57.684 36.000 15.04 0.00 46.74 2.57
1370 2619 7.922382 ACATAGGCATAGTAAAGGCTATCAAT 58.078 34.615 15.04 5.82 46.74 2.57
1371 2620 7.826252 ACATAGGCATAGTAAAGGCTATCAATG 59.174 37.037 15.04 11.18 46.74 2.82
1372 2621 5.006386 AGGCATAGTAAAGGCTATCAATGC 58.994 41.667 11.21 11.21 39.04 3.56
1373 2622 8.068943 ATAGGCATAGTAAAGGCTATCAATGCC 61.069 40.741 22.91 22.91 46.74 4.40
1387 2636 8.652810 GCTATCAATGCCACTTTTATTGAAAT 57.347 30.769 0.00 0.00 42.20 2.17
1388 2637 9.748708 GCTATCAATGCCACTTTTATTGAAATA 57.251 29.630 0.00 0.00 42.20 1.40
1419 2668 8.071122 TGCAAAACATTGTTCTAAATAACAGC 57.929 30.769 1.83 0.00 40.29 4.40
1420 2669 7.708322 TGCAAAACATTGTTCTAAATAACAGCA 59.292 29.630 1.83 0.00 40.29 4.41
1421 2670 8.547069 GCAAAACATTGTTCTAAATAACAGCAA 58.453 29.630 1.83 0.00 40.29 3.91
1423 2672 7.873739 AACATTGTTCTAAATAACAGCAAGC 57.126 32.000 0.00 0.00 40.29 4.01
1424 2673 6.980593 ACATTGTTCTAAATAACAGCAAGCA 58.019 32.000 0.00 0.00 40.29 3.91
1425 2674 7.432869 ACATTGTTCTAAATAACAGCAAGCAA 58.567 30.769 0.00 0.00 40.29 3.91
1426 2675 7.925483 ACATTGTTCTAAATAACAGCAAGCAAA 59.075 29.630 0.00 0.00 40.29 3.68
1427 2676 8.928733 CATTGTTCTAAATAACAGCAAGCAAAT 58.071 29.630 0.00 0.00 40.29 2.32
1428 2677 8.519492 TTGTTCTAAATAACAGCAAGCAAATC 57.481 30.769 0.00 0.00 40.29 2.17
1429 2678 7.090173 TGTTCTAAATAACAGCAAGCAAATCC 58.910 34.615 0.00 0.00 34.50 3.01
1430 2679 7.039784 TGTTCTAAATAACAGCAAGCAAATCCT 60.040 33.333 0.00 0.00 34.50 3.24
1431 2680 8.458843 GTTCTAAATAACAGCAAGCAAATCCTA 58.541 33.333 0.00 0.00 0.00 2.94
1432 2681 8.574251 TCTAAATAACAGCAAGCAAATCCTAA 57.426 30.769 0.00 0.00 0.00 2.69
1433 2682 8.458843 TCTAAATAACAGCAAGCAAATCCTAAC 58.541 33.333 0.00 0.00 0.00 2.34
1434 2683 6.588719 AATAACAGCAAGCAAATCCTAACA 57.411 33.333 0.00 0.00 0.00 2.41
1435 2684 4.935352 AACAGCAAGCAAATCCTAACAA 57.065 36.364 0.00 0.00 0.00 2.83
1436 2685 4.935352 ACAGCAAGCAAATCCTAACAAA 57.065 36.364 0.00 0.00 0.00 2.83
1437 2686 5.275067 ACAGCAAGCAAATCCTAACAAAA 57.725 34.783 0.00 0.00 0.00 2.44
1438 2687 5.049828 ACAGCAAGCAAATCCTAACAAAAC 58.950 37.500 0.00 0.00 0.00 2.43
1439 2688 5.163416 ACAGCAAGCAAATCCTAACAAAACT 60.163 36.000 0.00 0.00 0.00 2.66
1440 2689 6.040391 ACAGCAAGCAAATCCTAACAAAACTA 59.960 34.615 0.00 0.00 0.00 2.24
1441 2690 7.092716 CAGCAAGCAAATCCTAACAAAACTAT 58.907 34.615 0.00 0.00 0.00 2.12
1442 2691 7.599998 CAGCAAGCAAATCCTAACAAAACTATT 59.400 33.333 0.00 0.00 0.00 1.73
1443 2692 8.802267 AGCAAGCAAATCCTAACAAAACTATTA 58.198 29.630 0.00 0.00 0.00 0.98
1444 2693 9.076596 GCAAGCAAATCCTAACAAAACTATTAG 57.923 33.333 0.00 0.00 0.00 1.73
1447 2696 8.665685 AGCAAATCCTAACAAAACTATTAGACG 58.334 33.333 0.00 0.00 31.20 4.18
1448 2697 8.662141 GCAAATCCTAACAAAACTATTAGACGA 58.338 33.333 0.00 0.00 31.20 4.20
1453 2702 9.768662 TCCTAACAAAACTATTAGACGAAAACT 57.231 29.630 0.00 0.00 31.20 2.66
1465 2714 8.843885 ATTAGACGAAAACTAAACTAAAGCCT 57.156 30.769 0.00 0.00 34.28 4.58
1466 2715 9.933723 ATTAGACGAAAACTAAACTAAAGCCTA 57.066 29.630 0.00 0.00 34.28 3.93
1467 2716 9.762933 TTAGACGAAAACTAAACTAAAGCCTAA 57.237 29.630 0.00 0.00 0.00 2.69
1468 2717 8.667076 AGACGAAAACTAAACTAAAGCCTAAA 57.333 30.769 0.00 0.00 0.00 1.85
1469 2718 8.554528 AGACGAAAACTAAACTAAAGCCTAAAC 58.445 33.333 0.00 0.00 0.00 2.01
1470 2719 8.442632 ACGAAAACTAAACTAAAGCCTAAACT 57.557 30.769 0.00 0.00 0.00 2.66
1471 2720 8.896744 ACGAAAACTAAACTAAAGCCTAAACTT 58.103 29.630 0.00 0.00 0.00 2.66
1472 2721 9.378597 CGAAAACTAAACTAAAGCCTAAACTTC 57.621 33.333 0.00 0.00 0.00 3.01
1481 2730 9.660180 AACTAAAGCCTAAACTTCTAATCTCTG 57.340 33.333 0.00 0.00 0.00 3.35
1482 2731 9.036980 ACTAAAGCCTAAACTTCTAATCTCTGA 57.963 33.333 0.00 0.00 0.00 3.27
1483 2732 9.877178 CTAAAGCCTAAACTTCTAATCTCTGAA 57.123 33.333 0.00 0.00 0.00 3.02
1485 2734 9.746457 AAAGCCTAAACTTCTAATCTCTGAAAT 57.254 29.630 0.00 0.00 0.00 2.17
1486 2735 8.956533 AGCCTAAACTTCTAATCTCTGAAATC 57.043 34.615 0.00 0.00 0.00 2.17
1487 2736 8.543774 AGCCTAAACTTCTAATCTCTGAAATCA 58.456 33.333 0.00 0.00 0.00 2.57
1488 2737 8.825745 GCCTAAACTTCTAATCTCTGAAATCAG 58.174 37.037 3.99 3.99 45.08 2.90
1489 2738 8.825745 CCTAAACTTCTAATCTCTGAAATCAGC 58.174 37.037 5.53 0.00 43.46 4.26
1490 2739 9.376075 CTAAACTTCTAATCTCTGAAATCAGCA 57.624 33.333 5.53 0.00 43.46 4.41
1491 2740 7.608308 AACTTCTAATCTCTGAAATCAGCAC 57.392 36.000 5.53 0.00 43.46 4.40
1492 2741 6.705302 ACTTCTAATCTCTGAAATCAGCACA 58.295 36.000 5.53 0.00 43.46 4.57
1493 2742 6.593382 ACTTCTAATCTCTGAAATCAGCACAC 59.407 38.462 5.53 0.00 43.46 3.82
1494 2743 5.423015 TCTAATCTCTGAAATCAGCACACC 58.577 41.667 5.53 0.00 43.46 4.16
1495 2744 3.708403 ATCTCTGAAATCAGCACACCA 57.292 42.857 5.53 0.00 43.46 4.17
1496 2745 3.490439 TCTCTGAAATCAGCACACCAA 57.510 42.857 5.53 0.00 43.46 3.67
1497 2746 3.819368 TCTCTGAAATCAGCACACCAAA 58.181 40.909 5.53 0.00 43.46 3.28
1498 2747 3.565482 TCTCTGAAATCAGCACACCAAAC 59.435 43.478 5.53 0.00 43.46 2.93
1499 2748 3.554934 TCTGAAATCAGCACACCAAACT 58.445 40.909 5.53 0.00 43.46 2.66
1500 2749 3.953612 TCTGAAATCAGCACACCAAACTT 59.046 39.130 5.53 0.00 43.46 2.66
1501 2750 4.402155 TCTGAAATCAGCACACCAAACTTT 59.598 37.500 5.53 0.00 43.46 2.66
1502 2751 4.681744 TGAAATCAGCACACCAAACTTTC 58.318 39.130 0.00 0.00 0.00 2.62
1503 2752 3.733443 AATCAGCACACCAAACTTTCC 57.267 42.857 0.00 0.00 0.00 3.13
1504 2753 2.136298 TCAGCACACCAAACTTTCCA 57.864 45.000 0.00 0.00 0.00 3.53
1505 2754 2.451490 TCAGCACACCAAACTTTCCAA 58.549 42.857 0.00 0.00 0.00 3.53
1506 2755 3.030291 TCAGCACACCAAACTTTCCAAT 58.970 40.909 0.00 0.00 0.00 3.16
1507 2756 3.068024 TCAGCACACCAAACTTTCCAATC 59.932 43.478 0.00 0.00 0.00 2.67
1508 2757 2.365293 AGCACACCAAACTTTCCAATCC 59.635 45.455 0.00 0.00 0.00 3.01
1509 2758 2.547855 GCACACCAAACTTTCCAATCCC 60.548 50.000 0.00 0.00 0.00 3.85
1510 2759 2.697751 CACACCAAACTTTCCAATCCCA 59.302 45.455 0.00 0.00 0.00 4.37
1511 2760 3.133721 CACACCAAACTTTCCAATCCCAA 59.866 43.478 0.00 0.00 0.00 4.12
1512 2761 3.973305 ACACCAAACTTTCCAATCCCAAT 59.027 39.130 0.00 0.00 0.00 3.16
1513 2762 4.040339 ACACCAAACTTTCCAATCCCAATC 59.960 41.667 0.00 0.00 0.00 2.67
1514 2763 4.284234 CACCAAACTTTCCAATCCCAATCT 59.716 41.667 0.00 0.00 0.00 2.40
1515 2764 5.480073 CACCAAACTTTCCAATCCCAATCTA 59.520 40.000 0.00 0.00 0.00 1.98
1516 2765 6.155049 CACCAAACTTTCCAATCCCAATCTAT 59.845 38.462 0.00 0.00 0.00 1.98
1517 2766 6.730507 ACCAAACTTTCCAATCCCAATCTATT 59.269 34.615 0.00 0.00 0.00 1.73
1518 2767 7.237471 ACCAAACTTTCCAATCCCAATCTATTT 59.763 33.333 0.00 0.00 0.00 1.40
1519 2768 8.757877 CCAAACTTTCCAATCCCAATCTATTTA 58.242 33.333 0.00 0.00 0.00 1.40
1533 2782 6.691388 CCAATCTATTTAAAACCTTACAGCGC 59.309 38.462 0.00 0.00 0.00 5.92
1559 2808 2.290768 GGTAGTTTGAGGGAAAGGGACC 60.291 54.545 0.00 0.00 0.00 4.46
1572 2821 5.202765 GGAAAGGGACCGGGAATTATTAAA 58.797 41.667 6.32 0.00 0.00 1.52
1583 2832 5.510690 CGGGAATTATTAAAGGGGAATTGGC 60.511 44.000 0.00 0.00 0.00 4.52
1600 2849 2.195727 TGGCTGTGGGATTAGACATGA 58.804 47.619 0.00 0.00 0.00 3.07
1644 2893 0.107081 CACGTTTGGTGTAGGGTGGA 59.893 55.000 0.00 0.00 41.89 4.02
1651 2900 5.881443 CGTTTGGTGTAGGGTGGAAATTATA 59.119 40.000 0.00 0.00 0.00 0.98
1659 2908 3.135895 AGGGTGGAAATTATACGTGGGAG 59.864 47.826 0.00 0.00 0.00 4.30
1694 2943 7.654022 AATTAACTTCCTCTGTTTGGTTCAA 57.346 32.000 0.00 0.00 0.00 2.69
1714 2963 2.929301 AGGGTCTTGGAATGGGAGTTA 58.071 47.619 0.00 0.00 0.00 2.24
1724 2973 9.793259 TCTTGGAATGGGAGTTATTAATGATAC 57.207 33.333 0.00 0.00 0.00 2.24
1725 2974 9.573166 CTTGGAATGGGAGTTATTAATGATACA 57.427 33.333 0.00 0.00 0.00 2.29
1749 2998 8.368668 ACATTTAGTAGCTACAGAAACTGAACT 58.631 33.333 25.28 4.67 35.18 3.01
1762 3011 1.145738 ACTGAACTGACCAAGGCCAAT 59.854 47.619 5.01 0.00 0.00 3.16
1823 3072 6.476378 AGATACAAACACCATTTCAGTAGCT 58.524 36.000 0.00 0.00 0.00 3.32
1859 3108 9.546428 AAACTGAAATTCAATCTAAAAACTGGG 57.454 29.630 0.00 0.00 0.00 4.45
1860 3109 7.154656 ACTGAAATTCAATCTAAAAACTGGGC 58.845 34.615 0.00 0.00 0.00 5.36
1861 3110 7.060383 TGAAATTCAATCTAAAAACTGGGCA 57.940 32.000 0.00 0.00 0.00 5.36
1862 3111 7.504403 TGAAATTCAATCTAAAAACTGGGCAA 58.496 30.769 0.00 0.00 0.00 4.52
1863 3112 7.989741 TGAAATTCAATCTAAAAACTGGGCAAA 59.010 29.630 0.00 0.00 0.00 3.68
1864 3113 7.728847 AATTCAATCTAAAAACTGGGCAAAC 57.271 32.000 0.00 0.00 0.00 2.93
1865 3114 6.478512 TTCAATCTAAAAACTGGGCAAACT 57.521 33.333 0.00 0.00 0.00 2.66
1904 3153 2.498885 ACACTATCTCTGCACATGCTGA 59.501 45.455 12.21 12.21 44.81 4.26
1918 3167 3.457380 ACATGCTGAGATTATCCAGGTGT 59.543 43.478 10.92 0.00 0.00 4.16
2070 3333 6.153170 TGTCATAAGATCACCGTTGTAGGTAA 59.847 38.462 0.00 0.00 43.89 2.85
2110 3373 3.568007 ACATGACACAACAATACCCACAC 59.432 43.478 0.00 0.00 0.00 3.82
2161 3424 9.578576 TCCTTTTCTTATAGCATTAGCATGAAT 57.421 29.630 0.00 0.00 45.49 2.57
2200 3463 7.998753 ATTTCCGTAAATGTACTACTAGTGC 57.001 36.000 5.39 0.00 33.97 4.40
2211 3474 6.060136 TGTACTACTAGTGCACTGTATAGGG 58.940 44.000 29.57 16.30 35.91 3.53
2212 3475 5.126699 ACTACTAGTGCACTGTATAGGGT 57.873 43.478 29.57 16.87 0.00 4.34
2220 3483 3.139077 GCACTGTATAGGGTATGGCAAC 58.861 50.000 0.00 0.00 0.00 4.17
2259 3522 3.951037 AGCACCAAATGTTGTTACTGACA 59.049 39.130 0.00 0.00 36.19 3.58
2260 3523 4.400884 AGCACCAAATGTTGTTACTGACAA 59.599 37.500 0.00 0.00 45.70 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.251040 CACAAGTACGAGACGGTGATG 58.749 52.381 11.49 0.00 39.30 3.07
4 5 0.594602 CCACAAGTACGAGACGGTGA 59.405 55.000 15.61 0.00 39.30 4.02
5 6 0.594602 TCCACAAGTACGAGACGGTG 59.405 55.000 0.00 1.54 37.73 4.94
7 8 1.469251 CCATCCACAAGTACGAGACGG 60.469 57.143 0.00 0.00 0.00 4.79
8 9 1.471287 TCCATCCACAAGTACGAGACG 59.529 52.381 0.00 0.00 0.00 4.18
9 10 3.130516 TGATCCATCCACAAGTACGAGAC 59.869 47.826 0.00 0.00 0.00 3.36
10 11 3.361786 TGATCCATCCACAAGTACGAGA 58.638 45.455 0.00 0.00 0.00 4.04
11 12 3.801114 TGATCCATCCACAAGTACGAG 57.199 47.619 0.00 0.00 0.00 4.18
12 13 7.718334 ATATATGATCCATCCACAAGTACGA 57.282 36.000 0.00 0.00 0.00 3.43
13 14 8.777865 AAATATATGATCCATCCACAAGTACG 57.222 34.615 0.00 0.00 0.00 3.67
39 40 9.152595 GTGAAACTCCTTTCTTAATCTCGTAAT 57.847 33.333 0.00 0.00 37.30 1.89
40 41 8.530269 GTGAAACTCCTTTCTTAATCTCGTAA 57.470 34.615 0.00 0.00 37.30 3.18
106 107 7.926018 GCCAACATTTTTCTCTCCTTTTCTTTA 59.074 33.333 0.00 0.00 0.00 1.85
108 109 6.127083 TGCCAACATTTTTCTCTCCTTTTCTT 60.127 34.615 0.00 0.00 0.00 2.52
109 110 5.363580 TGCCAACATTTTTCTCTCCTTTTCT 59.636 36.000 0.00 0.00 0.00 2.52
111 112 5.129320 AGTGCCAACATTTTTCTCTCCTTTT 59.871 36.000 0.00 0.00 0.00 2.27
112 113 4.651045 AGTGCCAACATTTTTCTCTCCTTT 59.349 37.500 0.00 0.00 0.00 3.11
114 115 3.571401 CAGTGCCAACATTTTTCTCTCCT 59.429 43.478 0.00 0.00 0.00 3.69
116 117 3.311966 GCAGTGCCAACATTTTTCTCTC 58.688 45.455 2.85 0.00 0.00 3.20
117 118 2.287788 CGCAGTGCCAACATTTTTCTCT 60.288 45.455 10.11 0.00 0.00 3.10
119 120 1.408702 ACGCAGTGCCAACATTTTTCT 59.591 42.857 10.11 0.00 42.51 2.52
120 121 1.851658 ACGCAGTGCCAACATTTTTC 58.148 45.000 10.11 0.00 42.51 2.29
121 122 2.159114 AGAACGCAGTGCCAACATTTTT 60.159 40.909 10.11 0.00 45.00 1.94
122 123 1.408702 AGAACGCAGTGCCAACATTTT 59.591 42.857 10.11 0.00 45.00 1.82
124 125 0.311790 CAGAACGCAGTGCCAACATT 59.688 50.000 10.11 0.00 45.00 2.71
125 126 1.518056 CCAGAACGCAGTGCCAACAT 61.518 55.000 10.11 0.00 45.00 2.71
126 127 2.186160 CCAGAACGCAGTGCCAACA 61.186 57.895 10.11 0.00 45.00 3.33
128 129 1.891919 GACCAGAACGCAGTGCCAA 60.892 57.895 10.11 0.00 45.00 4.52
129 130 2.280797 GACCAGAACGCAGTGCCA 60.281 61.111 10.11 0.00 45.00 4.92
130 131 3.050275 GGACCAGAACGCAGTGCC 61.050 66.667 10.11 0.00 45.00 5.01
137 138 1.885163 AACTAGGCCGGACCAGAACG 61.885 60.000 10.73 0.00 43.14 3.95
138 139 1.188863 TAACTAGGCCGGACCAGAAC 58.811 55.000 10.73 0.00 43.14 3.01
139 140 1.941377 TTAACTAGGCCGGACCAGAA 58.059 50.000 10.73 0.00 43.14 3.02
140 141 1.941377 TTTAACTAGGCCGGACCAGA 58.059 50.000 10.73 0.00 43.14 3.86
141 142 2.353323 GTTTTAACTAGGCCGGACCAG 58.647 52.381 1.76 0.35 43.14 4.00
142 143 1.338011 CGTTTTAACTAGGCCGGACCA 60.338 52.381 1.76 0.00 43.14 4.02
144 145 1.995484 GTCGTTTTAACTAGGCCGGAC 59.005 52.381 5.05 0.00 0.00 4.79
145 146 1.895131 AGTCGTTTTAACTAGGCCGGA 59.105 47.619 5.05 0.00 0.00 5.14
147 148 1.916000 CGAGTCGTTTTAACTAGGCCG 59.084 52.381 3.82 0.00 0.00 6.13
150 151 1.916000 CGCCGAGTCGTTTTAACTAGG 59.084 52.381 12.31 0.00 41.08 3.02
152 153 1.402720 CCCGCCGAGTCGTTTTAACTA 60.403 52.381 12.31 0.00 0.00 2.24
155 156 1.374505 CCCCGCCGAGTCGTTTTAA 60.375 57.895 12.31 0.00 0.00 1.52
156 157 2.262292 CCCCGCCGAGTCGTTTTA 59.738 61.111 12.31 0.00 0.00 1.52
157 158 4.692475 CCCCCGCCGAGTCGTTTT 62.692 66.667 12.31 0.00 0.00 2.43
165 166 4.954118 ATATGCCTCCCCCGCCGA 62.954 66.667 0.00 0.00 0.00 5.54
168 169 0.960861 GCTAAATATGCCTCCCCCGC 60.961 60.000 0.00 0.00 0.00 6.13
179 180 7.095774 CGAACTGTAAGCGTATTGGCTAAATAT 60.096 37.037 0.00 0.00 43.93 1.28
180 181 6.199531 CGAACTGTAAGCGTATTGGCTAAATA 59.800 38.462 0.00 0.00 43.93 1.40
181 182 5.006358 CGAACTGTAAGCGTATTGGCTAAAT 59.994 40.000 0.00 0.00 43.93 1.40
182 183 4.327898 CGAACTGTAAGCGTATTGGCTAAA 59.672 41.667 0.00 0.00 43.93 1.85
184 185 3.441163 CGAACTGTAAGCGTATTGGCTA 58.559 45.455 0.00 0.00 43.93 3.93
186 187 1.267383 GCGAACTGTAAGCGTATTGGC 60.267 52.381 0.00 0.00 37.60 4.52
194 195 3.849953 CCCGCGCGAACTGTAAGC 61.850 66.667 34.63 0.00 37.60 3.09
195 196 1.562575 AAACCCGCGCGAACTGTAAG 61.563 55.000 34.63 11.81 42.29 2.34
196 197 1.159098 AAAACCCGCGCGAACTGTAA 61.159 50.000 34.63 0.00 0.00 2.41
197 198 1.594836 AAAACCCGCGCGAACTGTA 60.595 52.632 34.63 0.00 0.00 2.74
198 199 2.898343 AAAACCCGCGCGAACTGT 60.898 55.556 34.63 19.33 0.00 3.55
201 202 2.446753 TTAGCAAAACCCGCGCGAAC 62.447 55.000 34.63 11.77 0.00 3.95
202 203 1.783031 TTTAGCAAAACCCGCGCGAA 61.783 50.000 34.63 11.46 0.00 4.70
203 204 1.783031 TTTTAGCAAAACCCGCGCGA 61.783 50.000 34.63 4.21 0.00 5.87
204 205 0.935366 TTTTTAGCAAAACCCGCGCG 60.935 50.000 25.67 25.67 0.00 6.86
205 206 1.424403 ATTTTTAGCAAAACCCGCGC 58.576 45.000 0.00 0.00 34.63 6.86
216 217 9.387123 CGAGCTTAGATTGGAATTATTTTTAGC 57.613 33.333 0.00 0.00 0.00 3.09
221 222 9.832445 TCTTACGAGCTTAGATTGGAATTATTT 57.168 29.630 0.00 0.00 0.00 1.40
223 224 9.832445 TTTCTTACGAGCTTAGATTGGAATTAT 57.168 29.630 0.00 0.00 0.00 1.28
224 225 9.661563 TTTTCTTACGAGCTTAGATTGGAATTA 57.338 29.630 0.00 0.00 0.00 1.40
226 227 8.738645 ATTTTCTTACGAGCTTAGATTGGAAT 57.261 30.769 0.00 0.00 0.00 3.01
227 228 7.280205 GGATTTTCTTACGAGCTTAGATTGGAA 59.720 37.037 0.00 0.00 0.00 3.53
228 229 6.761714 GGATTTTCTTACGAGCTTAGATTGGA 59.238 38.462 0.00 0.00 0.00 3.53
231 232 7.222999 CGAAGGATTTTCTTACGAGCTTAGATT 59.777 37.037 0.00 0.00 0.00 2.40
232 233 6.697892 CGAAGGATTTTCTTACGAGCTTAGAT 59.302 38.462 0.00 0.00 0.00 1.98
233 234 6.034591 CGAAGGATTTTCTTACGAGCTTAGA 58.965 40.000 0.00 0.00 0.00 2.10
234 235 6.262323 CGAAGGATTTTCTTACGAGCTTAG 57.738 41.667 0.00 0.00 0.00 2.18
253 254 3.181520 CGTGAGCTATTTTTGTCCCGAAG 60.182 47.826 0.00 0.00 0.00 3.79
254 255 2.739913 CGTGAGCTATTTTTGTCCCGAA 59.260 45.455 0.00 0.00 0.00 4.30
255 256 2.343101 CGTGAGCTATTTTTGTCCCGA 58.657 47.619 0.00 0.00 0.00 5.14
257 258 1.132453 GCCGTGAGCTATTTTTGTCCC 59.868 52.381 0.00 0.00 38.99 4.46
258 259 2.544480 GCCGTGAGCTATTTTTGTCC 57.456 50.000 0.00 0.00 38.99 4.02
605 606 7.522073 GCCTTTTGAGTGTCATAATTTGTGAGA 60.522 37.037 0.00 0.00 0.00 3.27
607 608 6.040278 TGCCTTTTGAGTGTCATAATTTGTGA 59.960 34.615 0.00 0.00 0.00 3.58
609 610 6.403866 TGCCTTTTGAGTGTCATAATTTGT 57.596 33.333 0.00 0.00 0.00 2.83
610 611 5.865552 CCTGCCTTTTGAGTGTCATAATTTG 59.134 40.000 0.00 0.00 0.00 2.32
611 612 5.774690 TCCTGCCTTTTGAGTGTCATAATTT 59.225 36.000 0.00 0.00 0.00 1.82
612 613 5.324409 TCCTGCCTTTTGAGTGTCATAATT 58.676 37.500 0.00 0.00 0.00 1.40
613 614 4.922206 TCCTGCCTTTTGAGTGTCATAAT 58.078 39.130 0.00 0.00 0.00 1.28
614 615 4.365514 TCCTGCCTTTTGAGTGTCATAA 57.634 40.909 0.00 0.00 0.00 1.90
615 616 4.202461 ACTTCCTGCCTTTTGAGTGTCATA 60.202 41.667 0.00 0.00 0.00 2.15
616 617 2.957402 TCCTGCCTTTTGAGTGTCAT 57.043 45.000 0.00 0.00 0.00 3.06
617 618 2.092429 ACTTCCTGCCTTTTGAGTGTCA 60.092 45.455 0.00 0.00 0.00 3.58
618 619 2.576615 ACTTCCTGCCTTTTGAGTGTC 58.423 47.619 0.00 0.00 0.00 3.67
619 620 2.736670 ACTTCCTGCCTTTTGAGTGT 57.263 45.000 0.00 0.00 0.00 3.55
624 625 3.255888 GGTTCCTTACTTCCTGCCTTTTG 59.744 47.826 0.00 0.00 0.00 2.44
625 626 3.497332 GGTTCCTTACTTCCTGCCTTTT 58.503 45.455 0.00 0.00 0.00 2.27
626 627 2.552373 CGGTTCCTTACTTCCTGCCTTT 60.552 50.000 0.00 0.00 0.00 3.11
627 628 1.003233 CGGTTCCTTACTTCCTGCCTT 59.997 52.381 0.00 0.00 0.00 4.35
628 629 0.613777 CGGTTCCTTACTTCCTGCCT 59.386 55.000 0.00 0.00 0.00 4.75
629 630 0.611714 TCGGTTCCTTACTTCCTGCC 59.388 55.000 0.00 0.00 0.00 4.85
630 631 1.549170 TCTCGGTTCCTTACTTCCTGC 59.451 52.381 0.00 0.00 0.00 4.85
632 633 5.455872 TGATATCTCGGTTCCTTACTTCCT 58.544 41.667 3.98 0.00 0.00 3.36
633 634 5.786264 TGATATCTCGGTTCCTTACTTCC 57.214 43.478 3.98 0.00 0.00 3.46
634 635 7.976734 CCATATGATATCTCGGTTCCTTACTTC 59.023 40.741 3.65 0.00 0.00 3.01
635 636 7.579723 GCCATATGATATCTCGGTTCCTTACTT 60.580 40.741 3.65 0.00 0.00 2.24
637 638 6.043411 GCCATATGATATCTCGGTTCCTTAC 58.957 44.000 3.65 0.00 0.00 2.34
638 639 5.719563 TGCCATATGATATCTCGGTTCCTTA 59.280 40.000 3.65 0.00 0.00 2.69
639 640 4.532126 TGCCATATGATATCTCGGTTCCTT 59.468 41.667 3.65 0.00 0.00 3.36
641 642 4.471904 TGCCATATGATATCTCGGTTCC 57.528 45.455 3.65 0.00 0.00 3.62
642 643 9.935241 ATTATATGCCATATGATATCTCGGTTC 57.065 33.333 7.47 0.00 0.00 3.62
643 644 9.716531 CATTATATGCCATATGATATCTCGGTT 57.283 33.333 7.47 0.00 0.00 4.44
645 646 8.316946 ACCATTATATGCCATATGATATCTCGG 58.683 37.037 7.47 4.75 0.00 4.63
647 648 9.445878 CCACCATTATATGCCATATGATATCTC 57.554 37.037 7.47 0.00 0.00 2.75
648 649 8.952602 ACCACCATTATATGCCATATGATATCT 58.047 33.333 7.47 0.00 0.00 1.98
649 650 9.006839 CACCACCATTATATGCCATATGATATC 57.993 37.037 7.47 0.00 0.00 1.63
652 653 6.972490 TCACCACCATTATATGCCATATGAT 58.028 36.000 7.47 1.85 0.00 2.45
655 656 7.217028 AGATCACCACCATTATATGCCATAT 57.783 36.000 2.25 2.25 0.00 1.78
657 658 5.525454 AGATCACCACCATTATATGCCAT 57.475 39.130 0.00 0.00 0.00 4.40
658 659 4.999469 AGATCACCACCATTATATGCCA 57.001 40.909 0.00 0.00 0.00 4.92
660 661 6.882610 TTGAAGATCACCACCATTATATGC 57.117 37.500 0.00 0.00 0.00 3.14
661 662 7.666804 TCCATTGAAGATCACCACCATTATATG 59.333 37.037 0.00 0.00 0.00 1.78
662 663 7.758609 TCCATTGAAGATCACCACCATTATAT 58.241 34.615 0.00 0.00 0.00 0.86
663 664 7.147958 TCCATTGAAGATCACCACCATTATA 57.852 36.000 0.00 0.00 0.00 0.98
665 666 5.449297 TCCATTGAAGATCACCACCATTA 57.551 39.130 0.00 0.00 0.00 1.90
667 668 4.320546 TTCCATTGAAGATCACCACCAT 57.679 40.909 0.00 0.00 0.00 3.55
668 669 3.805066 TTCCATTGAAGATCACCACCA 57.195 42.857 0.00 0.00 0.00 4.17
685 686 4.166011 GCGCACGTGGATGCTTCC 62.166 66.667 18.88 11.69 43.80 3.46
686 687 2.753966 ATGCGCACGTGGATGCTTC 61.754 57.895 14.90 0.00 43.80 3.86
687 688 2.747460 ATGCGCACGTGGATGCTT 60.747 55.556 14.90 0.00 43.80 3.91
688 689 3.502455 CATGCGCACGTGGATGCT 61.502 61.111 14.90 0.00 43.80 3.79
689 690 3.326889 AACATGCGCACGTGGATGC 62.327 57.895 14.90 0.95 40.92 3.91
690 691 1.512522 CAACATGCGCACGTGGATG 60.513 57.895 14.90 8.89 42.68 3.51
692 693 2.280457 TCAACATGCGCACGTGGA 60.280 55.556 14.90 12.24 37.10 4.02
693 694 2.127270 GTCAACATGCGCACGTGG 60.127 61.111 14.90 9.08 37.10 4.94
695 696 2.590291 TGGTCAACATGCGCACGT 60.590 55.556 14.90 8.29 0.00 4.49
697 698 0.385974 GTTCTGGTCAACATGCGCAC 60.386 55.000 14.90 0.00 0.00 5.34
699 700 0.385974 GTGTTCTGGTCAACATGCGC 60.386 55.000 0.00 0.00 38.53 6.09
700 701 1.069703 CAGTGTTCTGGTCAACATGCG 60.070 52.381 0.00 0.00 38.53 4.73
701 702 2.031682 GTCAGTGTTCTGGTCAACATGC 60.032 50.000 0.00 0.00 41.59 4.06
703 704 2.102420 TCGTCAGTGTTCTGGTCAACAT 59.898 45.455 0.00 0.00 41.59 2.71
704 705 1.478916 TCGTCAGTGTTCTGGTCAACA 59.521 47.619 0.00 0.00 41.59 3.33
705 706 2.218953 TCGTCAGTGTTCTGGTCAAC 57.781 50.000 0.00 0.00 41.59 3.18
707 708 3.319689 TGTTATCGTCAGTGTTCTGGTCA 59.680 43.478 0.00 0.00 41.59 4.02
708 709 3.673809 GTGTTATCGTCAGTGTTCTGGTC 59.326 47.826 0.00 0.00 41.59 4.02
710 711 3.675225 CAGTGTTATCGTCAGTGTTCTGG 59.325 47.826 0.00 0.00 41.59 3.86
711 712 3.121944 GCAGTGTTATCGTCAGTGTTCTG 59.878 47.826 0.00 0.00 42.54 3.02
712 713 3.243737 TGCAGTGTTATCGTCAGTGTTCT 60.244 43.478 0.00 0.00 38.19 3.01
713 714 3.057019 TGCAGTGTTATCGTCAGTGTTC 58.943 45.455 0.00 0.00 38.19 3.18
714 715 3.106242 TGCAGTGTTATCGTCAGTGTT 57.894 42.857 0.00 0.00 38.19 3.32
715 716 2.812358 TGCAGTGTTATCGTCAGTGT 57.188 45.000 0.00 0.00 38.19 3.55
716 717 5.519927 TCAATATGCAGTGTTATCGTCAGTG 59.480 40.000 0.00 0.00 38.72 3.66
717 718 5.520288 GTCAATATGCAGTGTTATCGTCAGT 59.480 40.000 0.00 0.00 0.00 3.41
718 719 5.050769 GGTCAATATGCAGTGTTATCGTCAG 60.051 44.000 0.00 0.00 0.00 3.51
719 720 4.808895 GGTCAATATGCAGTGTTATCGTCA 59.191 41.667 0.00 0.00 0.00 4.35
720 721 4.085055 CGGTCAATATGCAGTGTTATCGTC 60.085 45.833 0.00 0.00 0.00 4.20
721 722 3.802139 CGGTCAATATGCAGTGTTATCGT 59.198 43.478 0.00 0.00 0.00 3.73
724 725 3.476552 CCCGGTCAATATGCAGTGTTAT 58.523 45.455 0.00 0.00 0.00 1.89
725 726 2.912771 CCCGGTCAATATGCAGTGTTA 58.087 47.619 0.00 0.00 0.00 2.41
726 727 1.750193 CCCGGTCAATATGCAGTGTT 58.250 50.000 0.00 0.00 0.00 3.32
727 728 0.748005 GCCCGGTCAATATGCAGTGT 60.748 55.000 0.00 0.00 0.00 3.55
728 729 0.747644 TGCCCGGTCAATATGCAGTG 60.748 55.000 0.00 0.00 0.00 3.66
729 730 0.748005 GTGCCCGGTCAATATGCAGT 60.748 55.000 0.00 0.00 31.69 4.40
730 731 0.747644 TGTGCCCGGTCAATATGCAG 60.748 55.000 0.00 0.00 31.69 4.41
731 732 0.322906 TTGTGCCCGGTCAATATGCA 60.323 50.000 0.00 0.00 0.00 3.96
733 734 0.381801 GCTTGTGCCCGGTCAATATG 59.618 55.000 0.00 0.00 0.00 1.78
735 736 0.392461 GAGCTTGTGCCCGGTCAATA 60.392 55.000 0.00 0.00 40.80 1.90
737 738 2.281484 GAGCTTGTGCCCGGTCAA 60.281 61.111 0.00 2.17 40.80 3.18
738 739 3.535629 CTGAGCTTGTGCCCGGTCA 62.536 63.158 0.00 0.00 40.80 4.02
743 744 3.951769 ATGGCCTGAGCTTGTGCCC 62.952 63.158 15.97 2.46 43.35 5.36
744 745 2.362120 ATGGCCTGAGCTTGTGCC 60.362 61.111 3.32 12.84 44.27 5.01
745 746 2.882876 CATGGCCTGAGCTTGTGC 59.117 61.111 3.32 0.00 39.73 4.57
747 748 1.677966 CTGCATGGCCTGAGCTTGT 60.678 57.895 3.32 0.00 39.73 3.16
748 749 2.415608 CCTGCATGGCCTGAGCTTG 61.416 63.158 3.32 3.16 39.73 4.01
750 751 4.124943 CCCTGCATGGCCTGAGCT 62.125 66.667 3.32 0.00 39.73 4.09
793 1994 3.554692 GCGTCTTGATGTCGGCCG 61.555 66.667 22.12 22.12 0.00 6.13
843 2075 4.688419 CAGTTGCGCCGTTGCTGG 62.688 66.667 4.18 0.00 35.36 4.85
865 2097 0.604780 GGCAGGATGGATGTGGATCG 60.605 60.000 0.00 0.00 35.86 3.69
950 2182 5.818336 GCTTCTTCTAGTTACTTTCCCCATC 59.182 44.000 0.00 0.00 0.00 3.51
953 2185 5.423704 AGCTTCTTCTAGTTACTTTCCCC 57.576 43.478 0.00 0.00 0.00 4.81
954 2186 7.172868 ACTAGCTTCTTCTAGTTACTTTCCC 57.827 40.000 0.00 0.00 44.95 3.97
956 2188 9.571810 GGTTACTAGCTTCTTCTAGTTACTTTC 57.428 37.037 15.22 1.90 44.95 2.62
961 2193 6.094603 CCGTGGTTACTAGCTTCTTCTAGTTA 59.905 42.308 8.51 0.00 44.95 2.24
980 2212 1.863662 CTCGATATAGCCGCCGTGGT 61.864 60.000 0.00 0.00 41.21 4.16
982 2214 0.452184 ATCTCGATATAGCCGCCGTG 59.548 55.000 0.00 0.00 0.00 4.94
985 2217 2.941453 TTCATCTCGATATAGCCGCC 57.059 50.000 0.00 0.00 0.00 6.13
986 2218 4.286910 GAGATTCATCTCGATATAGCCGC 58.713 47.826 1.00 0.00 43.29 6.53
1098 2347 3.598715 TCGTGTGACCTCGCCGTT 61.599 61.111 0.00 0.00 0.00 4.44
1272 2521 9.295825 TGCAATAATTTCCTAGAAAAGTCAGAA 57.704 29.630 0.00 0.00 0.00 3.02
1273 2522 8.862325 TGCAATAATTTCCTAGAAAAGTCAGA 57.138 30.769 0.00 0.00 0.00 3.27
1274 2523 9.346725 GTTGCAATAATTTCCTAGAAAAGTCAG 57.653 33.333 0.59 0.00 0.00 3.51
1275 2524 8.855110 TGTTGCAATAATTTCCTAGAAAAGTCA 58.145 29.630 0.59 0.00 0.00 3.41
1276 2525 9.346725 CTGTTGCAATAATTTCCTAGAAAAGTC 57.653 33.333 0.59 0.00 0.00 3.01
1277 2526 7.814587 GCTGTTGCAATAATTTCCTAGAAAAGT 59.185 33.333 0.59 0.00 39.41 2.66
1278 2527 7.008628 CGCTGTTGCAATAATTTCCTAGAAAAG 59.991 37.037 0.59 0.00 39.64 2.27
1279 2528 6.806249 CGCTGTTGCAATAATTTCCTAGAAAA 59.194 34.615 0.59 0.00 39.64 2.29
1280 2529 6.321717 CGCTGTTGCAATAATTTCCTAGAAA 58.678 36.000 0.59 0.00 39.64 2.52
1281 2530 5.163663 CCGCTGTTGCAATAATTTCCTAGAA 60.164 40.000 0.59 0.00 39.64 2.10
1282 2531 4.335315 CCGCTGTTGCAATAATTTCCTAGA 59.665 41.667 0.59 0.00 39.64 2.43
1283 2532 4.096382 ACCGCTGTTGCAATAATTTCCTAG 59.904 41.667 0.59 0.00 39.64 3.02
1284 2533 4.013728 ACCGCTGTTGCAATAATTTCCTA 58.986 39.130 0.59 0.00 39.64 2.94
1285 2534 2.825532 ACCGCTGTTGCAATAATTTCCT 59.174 40.909 0.59 0.00 39.64 3.36
1286 2535 3.230743 ACCGCTGTTGCAATAATTTCC 57.769 42.857 0.59 0.00 39.64 3.13
1287 2536 5.861787 AGTTTACCGCTGTTGCAATAATTTC 59.138 36.000 0.59 0.00 39.64 2.17
1288 2537 5.778862 AGTTTACCGCTGTTGCAATAATTT 58.221 33.333 0.59 0.00 39.64 1.82
1289 2538 5.385509 AGTTTACCGCTGTTGCAATAATT 57.614 34.783 0.59 0.00 39.64 1.40
1290 2539 5.385509 AAGTTTACCGCTGTTGCAATAAT 57.614 34.783 0.59 0.00 39.64 1.28
1291 2540 4.839668 AAGTTTACCGCTGTTGCAATAA 57.160 36.364 0.59 0.00 39.64 1.40
1292 2541 4.517453 AGAAAGTTTACCGCTGTTGCAATA 59.483 37.500 0.59 0.00 39.64 1.90
1293 2542 3.317993 AGAAAGTTTACCGCTGTTGCAAT 59.682 39.130 0.59 0.00 39.64 3.56
1294 2543 2.685897 AGAAAGTTTACCGCTGTTGCAA 59.314 40.909 0.00 0.00 39.64 4.08
1295 2544 2.032799 CAGAAAGTTTACCGCTGTTGCA 59.967 45.455 0.00 0.00 39.64 4.08
1296 2545 2.032924 ACAGAAAGTTTACCGCTGTTGC 59.967 45.455 2.65 0.00 36.49 4.17
1297 2546 3.963383 ACAGAAAGTTTACCGCTGTTG 57.037 42.857 2.65 0.00 36.49 3.33
1315 2564 9.862371 AAGTATACATGTTGTTGTTTGAAAACA 57.138 25.926 2.30 4.52 46.35 2.83
1317 2566 9.862371 ACAAGTATACATGTTGTTGTTTGAAAA 57.138 25.926 2.30 0.00 30.07 2.29
1320 2569 9.938670 GTTACAAGTATACATGTTGTTGTTTGA 57.061 29.630 18.02 0.00 35.95 2.69
1321 2570 9.723447 TGTTACAAGTATACATGTTGTTGTTTG 57.277 29.630 18.02 5.95 35.95 2.93
1326 2575 8.889717 GCCTATGTTACAAGTATACATGTTGTT 58.110 33.333 18.02 5.33 35.95 2.83
1327 2576 8.044309 TGCCTATGTTACAAGTATACATGTTGT 58.956 33.333 18.02 14.73 38.04 3.32
1328 2577 8.432110 TGCCTATGTTACAAGTATACATGTTG 57.568 34.615 18.02 9.92 34.55 3.33
1330 2579 9.929180 CTATGCCTATGTTACAAGTATACATGT 57.071 33.333 17.10 17.10 34.55 3.21
1331 2580 9.929180 ACTATGCCTATGTTACAAGTATACATG 57.071 33.333 5.50 6.07 34.55 3.21
1336 2585 9.998106 CCTTTACTATGCCTATGTTACAAGTAT 57.002 33.333 0.00 0.00 0.00 2.12
1337 2586 7.929785 GCCTTTACTATGCCTATGTTACAAGTA 59.070 37.037 0.00 0.00 0.00 2.24
1338 2587 6.766467 GCCTTTACTATGCCTATGTTACAAGT 59.234 38.462 0.00 0.00 0.00 3.16
1339 2588 6.992715 AGCCTTTACTATGCCTATGTTACAAG 59.007 38.462 0.00 0.00 0.00 3.16
1340 2589 6.895782 AGCCTTTACTATGCCTATGTTACAA 58.104 36.000 0.00 0.00 0.00 2.41
1341 2590 6.494666 AGCCTTTACTATGCCTATGTTACA 57.505 37.500 0.00 0.00 0.00 2.41
1342 2591 8.311836 TGATAGCCTTTACTATGCCTATGTTAC 58.688 37.037 0.00 0.00 32.95 2.50
1343 2592 8.430573 TGATAGCCTTTACTATGCCTATGTTA 57.569 34.615 0.00 0.00 32.95 2.41
1344 2593 7.316393 TGATAGCCTTTACTATGCCTATGTT 57.684 36.000 0.00 0.00 32.95 2.71
1345 2594 6.935240 TGATAGCCTTTACTATGCCTATGT 57.065 37.500 0.00 0.00 32.95 2.29
1346 2595 7.201679 GCATTGATAGCCTTTACTATGCCTATG 60.202 40.741 0.00 0.00 36.25 2.23
1347 2596 6.825721 GCATTGATAGCCTTTACTATGCCTAT 59.174 38.462 0.00 0.00 36.25 2.57
1348 2597 6.173339 GCATTGATAGCCTTTACTATGCCTA 58.827 40.000 0.00 0.00 36.25 3.93
1349 2598 5.006386 GCATTGATAGCCTTTACTATGCCT 58.994 41.667 0.00 0.00 36.25 4.75
1350 2599 5.302357 GCATTGATAGCCTTTACTATGCC 57.698 43.478 0.00 0.00 36.25 4.40
1362 2611 8.652810 ATTTCAATAAAAGTGGCATTGATAGC 57.347 30.769 0.00 0.00 38.21 2.97
1393 2642 8.711457 GCTGTTATTTAGAACAATGTTTTGCAT 58.289 29.630 0.00 0.00 38.80 3.96
1394 2643 7.708322 TGCTGTTATTTAGAACAATGTTTTGCA 59.292 29.630 0.00 0.00 38.80 4.08
1395 2644 8.071122 TGCTGTTATTTAGAACAATGTTTTGC 57.929 30.769 0.00 0.00 38.80 3.68
1397 2646 8.764287 GCTTGCTGTTATTTAGAACAATGTTTT 58.236 29.630 0.00 0.00 38.80 2.43
1398 2647 7.925483 TGCTTGCTGTTATTTAGAACAATGTTT 59.075 29.630 0.00 0.00 38.80 2.83
1399 2648 7.432869 TGCTTGCTGTTATTTAGAACAATGTT 58.567 30.769 0.00 0.00 38.80 2.71
1400 2649 6.980593 TGCTTGCTGTTATTTAGAACAATGT 58.019 32.000 0.00 0.00 38.80 2.71
1401 2650 7.872163 TTGCTTGCTGTTATTTAGAACAATG 57.128 32.000 0.00 0.00 38.80 2.82
1402 2651 9.143631 GATTTGCTTGCTGTTATTTAGAACAAT 57.856 29.630 0.00 0.00 38.80 2.71
1403 2652 7.598493 GGATTTGCTTGCTGTTATTTAGAACAA 59.402 33.333 0.00 0.00 38.80 2.83
1404 2653 7.039784 AGGATTTGCTTGCTGTTATTTAGAACA 60.040 33.333 0.00 0.00 36.98 3.18
1405 2654 7.315890 AGGATTTGCTTGCTGTTATTTAGAAC 58.684 34.615 0.00 0.00 0.00 3.01
1406 2655 7.466746 AGGATTTGCTTGCTGTTATTTAGAA 57.533 32.000 0.00 0.00 0.00 2.10
1407 2656 8.458843 GTTAGGATTTGCTTGCTGTTATTTAGA 58.541 33.333 0.00 0.00 0.00 2.10
1408 2657 8.243426 TGTTAGGATTTGCTTGCTGTTATTTAG 58.757 33.333 0.00 0.00 0.00 1.85
1409 2658 8.116651 TGTTAGGATTTGCTTGCTGTTATTTA 57.883 30.769 0.00 0.00 0.00 1.40
1410 2659 6.991938 TGTTAGGATTTGCTTGCTGTTATTT 58.008 32.000 0.00 0.00 0.00 1.40
1411 2660 6.588719 TGTTAGGATTTGCTTGCTGTTATT 57.411 33.333 0.00 0.00 0.00 1.40
1412 2661 6.588719 TTGTTAGGATTTGCTTGCTGTTAT 57.411 33.333 0.00 0.00 0.00 1.89
1413 2662 6.398234 TTTGTTAGGATTTGCTTGCTGTTA 57.602 33.333 0.00 0.00 0.00 2.41
1414 2663 4.935352 TTGTTAGGATTTGCTTGCTGTT 57.065 36.364 0.00 0.00 0.00 3.16
1415 2664 4.935352 TTTGTTAGGATTTGCTTGCTGT 57.065 36.364 0.00 0.00 0.00 4.40
1416 2665 5.291971 AGTTTTGTTAGGATTTGCTTGCTG 58.708 37.500 0.00 0.00 0.00 4.41
1417 2666 5.535753 AGTTTTGTTAGGATTTGCTTGCT 57.464 34.783 0.00 0.00 0.00 3.91
1418 2667 7.889589 AATAGTTTTGTTAGGATTTGCTTGC 57.110 32.000 0.00 0.00 0.00 4.01
1421 2670 8.665685 CGTCTAATAGTTTTGTTAGGATTTGCT 58.334 33.333 0.00 0.00 31.16 3.91
1422 2671 8.662141 TCGTCTAATAGTTTTGTTAGGATTTGC 58.338 33.333 0.00 0.00 31.16 3.68
1427 2676 9.768662 AGTTTTCGTCTAATAGTTTTGTTAGGA 57.231 29.630 0.00 0.00 31.16 2.94
1439 2688 9.933723 AGGCTTTAGTTTAGTTTTCGTCTAATA 57.066 29.630 0.00 0.00 0.00 0.98
1440 2689 8.843885 AGGCTTTAGTTTAGTTTTCGTCTAAT 57.156 30.769 0.00 0.00 0.00 1.73
1441 2690 9.762933 TTAGGCTTTAGTTTAGTTTTCGTCTAA 57.237 29.630 0.00 0.00 0.00 2.10
1442 2691 9.762933 TTTAGGCTTTAGTTTAGTTTTCGTCTA 57.237 29.630 0.00 0.00 0.00 2.59
1443 2692 8.554528 GTTTAGGCTTTAGTTTAGTTTTCGTCT 58.445 33.333 0.00 0.00 0.00 4.18
1444 2693 8.554528 AGTTTAGGCTTTAGTTTAGTTTTCGTC 58.445 33.333 0.00 0.00 0.00 4.20
1445 2694 8.442632 AGTTTAGGCTTTAGTTTAGTTTTCGT 57.557 30.769 0.00 0.00 0.00 3.85
1446 2695 9.378597 GAAGTTTAGGCTTTAGTTTAGTTTTCG 57.621 33.333 0.00 0.00 0.00 3.46
1455 2704 9.660180 CAGAGATTAGAAGTTTAGGCTTTAGTT 57.340 33.333 0.00 0.00 0.00 2.24
1456 2705 9.036980 TCAGAGATTAGAAGTTTAGGCTTTAGT 57.963 33.333 0.00 0.00 0.00 2.24
1457 2706 9.877178 TTCAGAGATTAGAAGTTTAGGCTTTAG 57.123 33.333 0.00 0.00 0.00 1.85
1459 2708 9.746457 ATTTCAGAGATTAGAAGTTTAGGCTTT 57.254 29.630 0.00 0.00 0.00 3.51
1460 2709 9.389755 GATTTCAGAGATTAGAAGTTTAGGCTT 57.610 33.333 0.00 0.00 0.00 4.35
1461 2710 8.543774 TGATTTCAGAGATTAGAAGTTTAGGCT 58.456 33.333 0.00 0.00 0.00 4.58
1462 2711 8.723942 TGATTTCAGAGATTAGAAGTTTAGGC 57.276 34.615 0.00 0.00 0.00 3.93
1463 2712 8.825745 GCTGATTTCAGAGATTAGAAGTTTAGG 58.174 37.037 11.70 0.00 46.59 2.69
1464 2713 9.376075 TGCTGATTTCAGAGATTAGAAGTTTAG 57.624 33.333 11.70 0.00 46.59 1.85
1465 2714 9.155975 GTGCTGATTTCAGAGATTAGAAGTTTA 57.844 33.333 11.70 0.00 46.59 2.01
1466 2715 7.663081 TGTGCTGATTTCAGAGATTAGAAGTTT 59.337 33.333 11.70 0.00 46.59 2.66
1467 2716 7.118971 GTGTGCTGATTTCAGAGATTAGAAGTT 59.881 37.037 11.70 0.00 46.59 2.66
1468 2717 6.593382 GTGTGCTGATTTCAGAGATTAGAAGT 59.407 38.462 11.70 0.00 46.59 3.01
1469 2718 6.036953 GGTGTGCTGATTTCAGAGATTAGAAG 59.963 42.308 11.70 0.00 46.59 2.85
1470 2719 5.877012 GGTGTGCTGATTTCAGAGATTAGAA 59.123 40.000 11.70 0.00 46.59 2.10
1471 2720 5.046376 TGGTGTGCTGATTTCAGAGATTAGA 60.046 40.000 11.70 0.00 46.59 2.10
1472 2721 5.181009 TGGTGTGCTGATTTCAGAGATTAG 58.819 41.667 11.70 0.00 46.59 1.73
1473 2722 5.164620 TGGTGTGCTGATTTCAGAGATTA 57.835 39.130 11.70 0.00 46.59 1.75
1474 2723 4.025040 TGGTGTGCTGATTTCAGAGATT 57.975 40.909 11.70 0.00 46.59 2.40
1475 2724 3.708403 TGGTGTGCTGATTTCAGAGAT 57.292 42.857 11.70 0.00 46.59 2.75
1476 2725 3.490439 TTGGTGTGCTGATTTCAGAGA 57.510 42.857 11.70 0.00 46.59 3.10
1477 2726 3.567164 AGTTTGGTGTGCTGATTTCAGAG 59.433 43.478 11.70 0.00 46.59 3.35
1478 2727 3.554934 AGTTTGGTGTGCTGATTTCAGA 58.445 40.909 11.70 0.00 46.59 3.27
1479 2728 3.996150 AGTTTGGTGTGCTGATTTCAG 57.004 42.857 3.13 3.13 46.40 3.02
1480 2729 4.441356 GGAAAGTTTGGTGTGCTGATTTCA 60.441 41.667 0.00 0.00 0.00 2.69
1481 2730 4.051237 GGAAAGTTTGGTGTGCTGATTTC 58.949 43.478 0.00 0.00 0.00 2.17
1482 2731 3.450457 TGGAAAGTTTGGTGTGCTGATTT 59.550 39.130 0.00 0.00 0.00 2.17
1483 2732 3.030291 TGGAAAGTTTGGTGTGCTGATT 58.970 40.909 0.00 0.00 0.00 2.57
1484 2733 2.665165 TGGAAAGTTTGGTGTGCTGAT 58.335 42.857 0.00 0.00 0.00 2.90
1485 2734 2.136298 TGGAAAGTTTGGTGTGCTGA 57.864 45.000 0.00 0.00 0.00 4.26
1486 2735 2.957491 TTGGAAAGTTTGGTGTGCTG 57.043 45.000 0.00 0.00 0.00 4.41
1487 2736 2.365293 GGATTGGAAAGTTTGGTGTGCT 59.635 45.455 0.00 0.00 0.00 4.40
1488 2737 2.547855 GGGATTGGAAAGTTTGGTGTGC 60.548 50.000 0.00 0.00 0.00 4.57
1489 2738 2.697751 TGGGATTGGAAAGTTTGGTGTG 59.302 45.455 0.00 0.00 0.00 3.82
1490 2739 3.039252 TGGGATTGGAAAGTTTGGTGT 57.961 42.857 0.00 0.00 0.00 4.16
1491 2740 4.284234 AGATTGGGATTGGAAAGTTTGGTG 59.716 41.667 0.00 0.00 0.00 4.17
1492 2741 4.492646 AGATTGGGATTGGAAAGTTTGGT 58.507 39.130 0.00 0.00 0.00 3.67
1493 2742 6.796785 ATAGATTGGGATTGGAAAGTTTGG 57.203 37.500 0.00 0.00 0.00 3.28
1498 2747 9.599866 GGTTTTAAATAGATTGGGATTGGAAAG 57.400 33.333 0.00 0.00 0.00 2.62
1499 2748 9.332713 AGGTTTTAAATAGATTGGGATTGGAAA 57.667 29.630 0.00 0.00 0.00 3.13
1500 2749 8.909423 AGGTTTTAAATAGATTGGGATTGGAA 57.091 30.769 0.00 0.00 0.00 3.53
1501 2750 8.909423 AAGGTTTTAAATAGATTGGGATTGGA 57.091 30.769 0.00 0.00 0.00 3.53
1505 2754 8.914011 GCTGTAAGGTTTTAAATAGATTGGGAT 58.086 33.333 0.00 0.00 0.00 3.85
1506 2755 7.066525 CGCTGTAAGGTTTTAAATAGATTGGGA 59.933 37.037 0.00 0.00 0.00 4.37
1507 2756 7.193595 CGCTGTAAGGTTTTAAATAGATTGGG 58.806 38.462 0.00 0.00 0.00 4.12
1508 2757 6.691388 GCGCTGTAAGGTTTTAAATAGATTGG 59.309 38.462 0.00 0.00 0.00 3.16
1509 2758 6.410914 CGCGCTGTAAGGTTTTAAATAGATTG 59.589 38.462 5.56 0.00 0.00 2.67
1510 2759 6.093082 ACGCGCTGTAAGGTTTTAAATAGATT 59.907 34.615 5.73 0.00 0.00 2.40
1511 2760 5.583457 ACGCGCTGTAAGGTTTTAAATAGAT 59.417 36.000 5.73 0.00 0.00 1.98
1512 2761 4.931002 ACGCGCTGTAAGGTTTTAAATAGA 59.069 37.500 5.73 0.00 0.00 1.98
1513 2762 5.212589 ACGCGCTGTAAGGTTTTAAATAG 57.787 39.130 5.73 0.00 0.00 1.73
1514 2763 5.610235 AACGCGCTGTAAGGTTTTAAATA 57.390 34.783 5.73 0.00 0.00 1.40
1515 2764 4.492791 AACGCGCTGTAAGGTTTTAAAT 57.507 36.364 5.73 0.00 0.00 1.40
1516 2765 3.967203 AACGCGCTGTAAGGTTTTAAA 57.033 38.095 5.73 0.00 0.00 1.52
1517 2766 3.548415 CCAAACGCGCTGTAAGGTTTTAA 60.548 43.478 5.73 0.00 30.73 1.52
1518 2767 2.031857 CCAAACGCGCTGTAAGGTTTTA 60.032 45.455 5.73 0.00 30.73 1.52
1519 2768 1.268845 CCAAACGCGCTGTAAGGTTTT 60.269 47.619 5.73 0.00 30.73 2.43
1520 2769 0.309612 CCAAACGCGCTGTAAGGTTT 59.690 50.000 5.73 4.27 33.19 3.27
1521 2770 0.816421 ACCAAACGCGCTGTAAGGTT 60.816 50.000 5.73 0.00 35.08 3.50
1522 2771 0.033781 TACCAAACGCGCTGTAAGGT 59.966 50.000 21.97 21.97 40.04 3.50
1523 2772 0.719465 CTACCAAACGCGCTGTAAGG 59.281 55.000 5.73 12.60 0.00 2.69
1533 2782 3.252458 CCTTTCCCTCAAACTACCAAACG 59.748 47.826 0.00 0.00 0.00 3.60
1559 2808 5.510690 GCCAATTCCCCTTTAATAATTCCCG 60.511 44.000 0.00 0.00 0.00 5.14
1572 2821 1.224003 ATCCCACAGCCAATTCCCCT 61.224 55.000 0.00 0.00 0.00 4.79
1583 2832 5.114780 CACTTCTCATGTCTAATCCCACAG 58.885 45.833 0.00 0.00 0.00 3.66
1644 2893 6.469410 TCTGTCAAACTCCCACGTATAATTT 58.531 36.000 0.00 0.00 0.00 1.82
1651 2900 2.702592 TTTCTGTCAAACTCCCACGT 57.297 45.000 0.00 0.00 0.00 4.49
1659 2908 8.406297 ACAGAGGAAGTTAATTTTCTGTCAAAC 58.594 33.333 10.60 0.00 39.77 2.93
1694 2943 1.760405 AACTCCCATTCCAAGACCCT 58.240 50.000 0.00 0.00 0.00 4.34
1724 2973 8.651588 CAGTTCAGTTTCTGTAGCTACTAAATG 58.348 37.037 23.84 20.95 32.61 2.32
1725 2974 8.585881 TCAGTTCAGTTTCTGTAGCTACTAAAT 58.414 33.333 23.84 12.02 33.89 1.40
1769 3018 5.104776 TGCTCACTTTCTATACTGCCAATCT 60.105 40.000 0.00 0.00 0.00 2.40
1773 3022 4.551702 TTGCTCACTTTCTATACTGCCA 57.448 40.909 0.00 0.00 0.00 4.92
1821 3070 7.935338 TGAATTTCAGTTTCTCATTTTGAGC 57.065 32.000 0.00 0.00 43.95 4.26
1833 3082 9.546428 CCCAGTTTTTAGATTGAATTTCAGTTT 57.454 29.630 0.00 0.00 0.00 2.66
1836 3085 7.153985 TGCCCAGTTTTTAGATTGAATTTCAG 58.846 34.615 0.00 0.00 0.00 3.02
1844 3093 7.433680 AGTTAGTTTGCCCAGTTTTTAGATTG 58.566 34.615 0.00 0.00 0.00 2.67
1854 3103 4.717279 TTCCTTAGTTAGTTTGCCCAGT 57.283 40.909 0.00 0.00 0.00 4.00
1855 3104 6.399639 TTTTTCCTTAGTTAGTTTGCCCAG 57.600 37.500 0.00 0.00 0.00 4.45
1894 3143 2.812591 CCTGGATAATCTCAGCATGTGC 59.187 50.000 0.00 0.00 42.49 4.57
1904 3153 3.189606 TGGGTCAACACCTGGATAATCT 58.810 45.455 0.00 0.00 43.22 2.40
1918 3167 2.632512 GGAAGATTGGCTTTTGGGTCAA 59.367 45.455 0.00 0.00 36.83 3.18
2041 3290 7.872993 CCTACAACGGTGATCTTATGACATTAT 59.127 37.037 7.88 0.00 0.00 1.28
2042 3291 7.147794 ACCTACAACGGTGATCTTATGACATTA 60.148 37.037 7.88 0.00 35.52 1.90
2058 3321 5.080969 TCATTTCCTCTTACCTACAACGG 57.919 43.478 0.00 0.00 0.00 4.44
2059 3322 5.962433 TCTCATTTCCTCTTACCTACAACG 58.038 41.667 0.00 0.00 0.00 4.10
2070 3333 3.777106 TGTGTTGCTCTCATTTCCTCT 57.223 42.857 0.00 0.00 0.00 3.69
2110 3373 5.627499 TTTTCATCTCTTTCATCAACCGG 57.373 39.130 0.00 0.00 0.00 5.28
2146 3409 8.398878 TGAATGATTGATTCATGCTAATGCTA 57.601 30.769 0.00 0.00 44.65 3.49
2200 3463 4.415881 TGTTGCCATACCCTATACAGTG 57.584 45.455 0.00 0.00 0.00 3.66
2234 3497 4.887071 TCAGTAACAACATTTGGTGCTTCT 59.113 37.500 0.00 0.00 40.56 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.