Multiple sequence alignment - TraesCS7A01G062200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G062200 chr7A 100.000 3029 0 0 1 3029 30879126 30882154 0.000000e+00 5594
1 TraesCS7A01G062200 chr6A 95.220 2573 110 8 459 3029 14574540 14571979 0.000000e+00 4058
2 TraesCS7A01G062200 chr7D 88.108 1295 144 8 1623 2911 59930119 59931409 0.000000e+00 1530
3 TraesCS7A01G062200 chr7D 85.663 279 17 7 1 257 30396893 30397170 3.850000e-69 272
4 TraesCS7A01G062200 chr6D 89.647 850 80 4 2184 3029 23110934 23110089 0.000000e+00 1075
5 TraesCS7A01G062200 chr6D 85.586 111 16 0 2080 2190 23123470 23123360 1.910000e-22 117
6 TraesCS7A01G062200 chr5A 98.413 378 6 0 2652 3029 277338899 277339276 0.000000e+00 665
7 TraesCS7A01G062200 chr4A 83.871 279 22 8 1 257 698493284 698493561 8.390000e-61 244
8 TraesCS7A01G062200 chr4A 83.871 279 22 6 1 257 698669850 698670127 8.390000e-61 244
9 TraesCS7A01G062200 chr4A 82.500 280 25 9 1 257 698312268 698312546 1.090000e-54 224
10 TraesCS7A01G062200 chr4A 88.722 133 11 2 271 403 698670207 698670335 3.130000e-35 159
11 TraesCS7A01G062200 chr4A 85.714 133 15 2 271 403 698312626 698312754 1.460000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G062200 chr7A 30879126 30882154 3028 False 5594 5594 100.000 1 3029 1 chr7A.!!$F1 3028
1 TraesCS7A01G062200 chr6A 14571979 14574540 2561 True 4058 4058 95.220 459 3029 1 chr6A.!!$R1 2570
2 TraesCS7A01G062200 chr7D 59930119 59931409 1290 False 1530 1530 88.108 1623 2911 1 chr7D.!!$F2 1288
3 TraesCS7A01G062200 chr6D 23110089 23110934 845 True 1075 1075 89.647 2184 3029 1 chr6D.!!$R1 845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
423 424 0.036010 AGTGGGAGCCATCAAAGTCG 60.036 55.0 0.00 0.0 35.28 4.18 F
431 432 0.036164 CCATCAAAGTCGACCCACCA 59.964 55.0 13.01 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 1944 0.037590 ATTGTTTGCGTCCTGCCCTA 59.962 50.000 0.00 0.0 45.60 3.53 R
2050 2052 1.688735 CCTGATCCGCTGATCCTGTTA 59.311 52.381 14.66 0.0 45.74 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.963878 GGCACGTCCTTGATCCAT 57.036 55.556 0.00 0.00 0.00 3.41
18 19 2.695314 GGCACGTCCTTGATCCATC 58.305 57.895 0.00 0.00 0.00 3.51
19 20 0.815615 GGCACGTCCTTGATCCATCC 60.816 60.000 0.00 0.00 0.00 3.51
20 21 0.107703 GCACGTCCTTGATCCATCCA 60.108 55.000 0.00 0.00 0.00 3.41
21 22 1.678728 GCACGTCCTTGATCCATCCAA 60.679 52.381 0.00 0.00 0.00 3.53
22 23 2.283298 CACGTCCTTGATCCATCCAAG 58.717 52.381 0.00 0.00 40.37 3.61
32 33 7.886629 CTTGATCCATCCAAGGAGAAATAAA 57.113 36.000 0.00 0.00 41.90 1.40
33 34 8.474710 CTTGATCCATCCAAGGAGAAATAAAT 57.525 34.615 0.00 0.00 41.90 1.40
34 35 9.578576 CTTGATCCATCCAAGGAGAAATAAATA 57.421 33.333 0.00 0.00 41.90 1.40
35 36 9.578576 TTGATCCATCCAAGGAGAAATAAATAG 57.421 33.333 0.00 0.00 41.90 1.73
36 37 7.667219 TGATCCATCCAAGGAGAAATAAATAGC 59.333 37.037 0.00 0.00 41.90 2.97
37 38 7.154191 TCCATCCAAGGAGAAATAAATAGCT 57.846 36.000 0.00 0.00 32.77 3.32
38 39 8.275187 TCCATCCAAGGAGAAATAAATAGCTA 57.725 34.615 0.00 0.00 32.77 3.32
39 40 8.378565 TCCATCCAAGGAGAAATAAATAGCTAG 58.621 37.037 0.00 0.00 32.77 3.42
40 41 7.120432 CCATCCAAGGAGAAATAAATAGCTAGC 59.880 40.741 6.62 6.62 0.00 3.42
41 42 7.380423 TCCAAGGAGAAATAAATAGCTAGCT 57.620 36.000 23.12 23.12 0.00 3.32
42 43 7.220030 TCCAAGGAGAAATAAATAGCTAGCTG 58.780 38.462 27.68 5.02 0.00 4.24
43 44 6.995091 CCAAGGAGAAATAAATAGCTAGCTGT 59.005 38.462 27.68 18.59 0.00 4.40
44 45 7.500559 CCAAGGAGAAATAAATAGCTAGCTGTT 59.499 37.037 27.68 23.63 0.00 3.16
45 46 8.341173 CAAGGAGAAATAAATAGCTAGCTGTTG 58.659 37.037 27.68 7.20 0.00 3.33
46 47 7.796054 AGGAGAAATAAATAGCTAGCTGTTGA 58.204 34.615 27.68 20.15 0.00 3.18
47 48 7.930865 AGGAGAAATAAATAGCTAGCTGTTGAG 59.069 37.037 27.68 0.00 0.00 3.02
48 49 7.172361 GGAGAAATAAATAGCTAGCTGTTGAGG 59.828 40.741 27.68 0.00 0.00 3.86
49 50 7.569240 AGAAATAAATAGCTAGCTGTTGAGGT 58.431 34.615 27.68 13.68 0.00 3.85
50 51 7.713073 AGAAATAAATAGCTAGCTGTTGAGGTC 59.287 37.037 27.68 18.64 0.00 3.85
51 52 3.444703 AATAGCTAGCTGTTGAGGTCG 57.555 47.619 27.68 0.00 0.00 4.79
52 53 2.124277 TAGCTAGCTGTTGAGGTCGA 57.876 50.000 27.68 0.00 0.00 4.20
53 54 0.528470 AGCTAGCTGTTGAGGTCGAC 59.472 55.000 18.57 7.13 0.00 4.20
54 55 0.243907 GCTAGCTGTTGAGGTCGACA 59.756 55.000 18.91 0.11 37.89 4.35
55 56 1.336887 GCTAGCTGTTGAGGTCGACAA 60.337 52.381 18.91 0.00 39.57 3.18
56 57 2.866460 GCTAGCTGTTGAGGTCGACAAA 60.866 50.000 18.91 5.67 39.57 2.83
57 58 1.583054 AGCTGTTGAGGTCGACAAAC 58.417 50.000 18.91 17.52 39.57 2.93
58 59 1.134521 AGCTGTTGAGGTCGACAAACA 60.135 47.619 18.91 20.74 39.57 2.83
59 60 1.003866 GCTGTTGAGGTCGACAAACAC 60.004 52.381 18.91 13.72 39.57 3.32
60 61 2.276201 CTGTTGAGGTCGACAAACACA 58.724 47.619 18.91 12.93 39.57 3.72
61 62 2.872245 CTGTTGAGGTCGACAAACACAT 59.128 45.455 18.91 0.00 39.57 3.21
62 63 3.275143 TGTTGAGGTCGACAAACACATT 58.725 40.909 18.91 0.00 37.32 2.71
63 64 3.064682 TGTTGAGGTCGACAAACACATTG 59.935 43.478 18.91 0.00 44.95 2.82
79 80 6.966435 ACACATTGTTTTTCCTGTTTTGAG 57.034 33.333 0.00 0.00 0.00 3.02
80 81 6.463360 ACACATTGTTTTTCCTGTTTTGAGT 58.537 32.000 0.00 0.00 0.00 3.41
81 82 6.589907 ACACATTGTTTTTCCTGTTTTGAGTC 59.410 34.615 0.00 0.00 0.00 3.36
82 83 6.035975 CACATTGTTTTTCCTGTTTTGAGTCC 59.964 38.462 0.00 0.00 0.00 3.85
83 84 5.730296 TTGTTTTTCCTGTTTTGAGTCCA 57.270 34.783 0.00 0.00 0.00 4.02
84 85 5.323371 TGTTTTTCCTGTTTTGAGTCCAG 57.677 39.130 0.00 0.00 0.00 3.86
85 86 5.013547 TGTTTTTCCTGTTTTGAGTCCAGA 58.986 37.500 0.00 0.00 0.00 3.86
86 87 5.478679 TGTTTTTCCTGTTTTGAGTCCAGAA 59.521 36.000 0.00 0.00 0.00 3.02
87 88 5.576447 TTTTCCTGTTTTGAGTCCAGAAC 57.424 39.130 0.00 0.00 37.75 3.01
88 89 4.503714 TTCCTGTTTTGAGTCCAGAACT 57.496 40.909 0.00 0.00 42.42 3.01
89 90 3.808728 TCCTGTTTTGAGTCCAGAACTG 58.191 45.455 0.00 0.00 38.74 3.16
90 91 2.291741 CCTGTTTTGAGTCCAGAACTGC 59.708 50.000 0.00 0.00 38.74 4.40
91 92 3.209410 CTGTTTTGAGTCCAGAACTGCT 58.791 45.455 0.00 0.00 38.74 4.24
92 93 3.206150 TGTTTTGAGTCCAGAACTGCTC 58.794 45.455 0.00 0.00 38.74 4.26
93 94 2.550180 GTTTTGAGTCCAGAACTGCTCC 59.450 50.000 0.00 0.00 38.74 4.70
94 95 1.722034 TTGAGTCCAGAACTGCTCCT 58.278 50.000 0.00 0.00 38.74 3.69
95 96 2.604912 TGAGTCCAGAACTGCTCCTA 57.395 50.000 0.00 0.00 38.74 2.94
96 97 2.171840 TGAGTCCAGAACTGCTCCTAC 58.828 52.381 0.00 0.00 38.74 3.18
97 98 2.225142 TGAGTCCAGAACTGCTCCTACT 60.225 50.000 0.00 0.00 38.74 2.57
98 99 2.829120 GAGTCCAGAACTGCTCCTACTT 59.171 50.000 0.00 0.00 38.74 2.24
99 100 2.564947 AGTCCAGAACTGCTCCTACTTG 59.435 50.000 0.00 0.00 36.65 3.16
100 101 2.300437 GTCCAGAACTGCTCCTACTTGT 59.700 50.000 0.00 0.00 0.00 3.16
101 102 3.510360 GTCCAGAACTGCTCCTACTTGTA 59.490 47.826 0.00 0.00 0.00 2.41
102 103 3.510360 TCCAGAACTGCTCCTACTTGTAC 59.490 47.826 0.00 0.00 0.00 2.90
103 104 3.511934 CCAGAACTGCTCCTACTTGTACT 59.488 47.826 0.00 0.00 0.00 2.73
104 105 4.705507 CCAGAACTGCTCCTACTTGTACTA 59.294 45.833 0.00 0.00 0.00 1.82
105 106 5.361285 CCAGAACTGCTCCTACTTGTACTAT 59.639 44.000 0.00 0.00 0.00 2.12
106 107 6.269315 CAGAACTGCTCCTACTTGTACTATG 58.731 44.000 0.00 0.00 0.00 2.23
107 108 6.095580 CAGAACTGCTCCTACTTGTACTATGA 59.904 42.308 0.00 0.00 0.00 2.15
108 109 6.836527 AGAACTGCTCCTACTTGTACTATGAT 59.163 38.462 0.00 0.00 0.00 2.45
109 110 6.398234 ACTGCTCCTACTTGTACTATGATG 57.602 41.667 0.00 0.00 0.00 3.07
110 111 6.129874 ACTGCTCCTACTTGTACTATGATGA 58.870 40.000 0.00 0.00 0.00 2.92
111 112 6.607600 ACTGCTCCTACTTGTACTATGATGAA 59.392 38.462 0.00 0.00 0.00 2.57
112 113 7.288852 ACTGCTCCTACTTGTACTATGATGAAT 59.711 37.037 0.00 0.00 0.00 2.57
113 114 8.023021 TGCTCCTACTTGTACTATGATGAATT 57.977 34.615 0.00 0.00 0.00 2.17
114 115 9.143155 TGCTCCTACTTGTACTATGATGAATTA 57.857 33.333 0.00 0.00 0.00 1.40
175 176 9.912634 ATAAAAATGTTGGTCTCATAAACTGTG 57.087 29.630 0.00 0.00 0.00 3.66
176 177 7.581213 AAAATGTTGGTCTCATAAACTGTGA 57.419 32.000 0.00 0.00 0.00 3.58
177 178 7.581213 AAATGTTGGTCTCATAAACTGTGAA 57.419 32.000 0.00 0.00 0.00 3.18
178 179 6.560253 ATGTTGGTCTCATAAACTGTGAAC 57.440 37.500 0.00 0.00 35.95 3.18
179 180 5.680619 TGTTGGTCTCATAAACTGTGAACT 58.319 37.500 0.00 0.00 36.30 3.01
180 181 5.758296 TGTTGGTCTCATAAACTGTGAACTC 59.242 40.000 0.00 0.00 36.30 3.01
181 182 4.894784 TGGTCTCATAAACTGTGAACTCC 58.105 43.478 0.00 0.00 36.30 3.85
182 183 4.254492 GGTCTCATAAACTGTGAACTCCC 58.746 47.826 0.00 0.00 33.26 4.30
183 184 4.254492 GTCTCATAAACTGTGAACTCCCC 58.746 47.826 0.00 0.00 0.00 4.81
184 185 3.263425 TCTCATAAACTGTGAACTCCCCC 59.737 47.826 0.00 0.00 0.00 5.40
185 186 2.983192 TCATAAACTGTGAACTCCCCCA 59.017 45.455 0.00 0.00 0.00 4.96
186 187 3.591527 TCATAAACTGTGAACTCCCCCAT 59.408 43.478 0.00 0.00 0.00 4.00
187 188 4.785914 TCATAAACTGTGAACTCCCCCATA 59.214 41.667 0.00 0.00 0.00 2.74
188 189 3.434940 AAACTGTGAACTCCCCCATAC 57.565 47.619 0.00 0.00 0.00 2.39
189 190 2.038863 ACTGTGAACTCCCCCATACA 57.961 50.000 0.00 0.00 0.00 2.29
190 191 2.344592 ACTGTGAACTCCCCCATACAA 58.655 47.619 0.00 0.00 0.00 2.41
191 192 2.919602 ACTGTGAACTCCCCCATACAAT 59.080 45.455 0.00 0.00 0.00 2.71
192 193 3.333680 ACTGTGAACTCCCCCATACAATT 59.666 43.478 0.00 0.00 0.00 2.32
193 194 4.202673 ACTGTGAACTCCCCCATACAATTT 60.203 41.667 0.00 0.00 0.00 1.82
194 195 5.014755 ACTGTGAACTCCCCCATACAATTTA 59.985 40.000 0.00 0.00 0.00 1.40
195 196 5.258051 TGTGAACTCCCCCATACAATTTAC 58.742 41.667 0.00 0.00 0.00 2.01
196 197 5.014755 TGTGAACTCCCCCATACAATTTACT 59.985 40.000 0.00 0.00 0.00 2.24
197 198 5.589050 GTGAACTCCCCCATACAATTTACTC 59.411 44.000 0.00 0.00 0.00 2.59
198 199 4.790718 ACTCCCCCATACAATTTACTCC 57.209 45.455 0.00 0.00 0.00 3.85
199 200 3.135895 ACTCCCCCATACAATTTACTCCG 59.864 47.826 0.00 0.00 0.00 4.63
200 201 2.440253 TCCCCCATACAATTTACTCCGG 59.560 50.000 0.00 0.00 0.00 5.14
201 202 2.227194 CCCCATACAATTTACTCCGGC 58.773 52.381 0.00 0.00 0.00 6.13
202 203 2.422235 CCCCATACAATTTACTCCGGCA 60.422 50.000 0.00 0.00 0.00 5.69
203 204 2.878406 CCCATACAATTTACTCCGGCAG 59.122 50.000 0.00 0.00 0.00 4.85
204 205 3.433031 CCCATACAATTTACTCCGGCAGA 60.433 47.826 0.00 0.00 0.00 4.26
205 206 4.389374 CCATACAATTTACTCCGGCAGAT 58.611 43.478 0.00 0.00 0.00 2.90
206 207 5.512404 CCCATACAATTTACTCCGGCAGATA 60.512 44.000 0.00 0.00 0.00 1.98
207 208 5.995282 CCATACAATTTACTCCGGCAGATAA 59.005 40.000 0.00 0.00 0.00 1.75
208 209 6.485313 CCATACAATTTACTCCGGCAGATAAA 59.515 38.462 0.00 0.00 0.00 1.40
209 210 7.012894 CCATACAATTTACTCCGGCAGATAAAA 59.987 37.037 0.00 0.81 0.00 1.52
210 211 6.827586 ACAATTTACTCCGGCAGATAAAAA 57.172 33.333 0.00 0.00 0.00 1.94
232 233 7.718334 AAAAATTCCTTTCCCGATGTTATCT 57.282 32.000 0.00 0.00 0.00 1.98
233 234 8.817092 AAAAATTCCTTTCCCGATGTTATCTA 57.183 30.769 0.00 0.00 0.00 1.98
234 235 8.996651 AAAATTCCTTTCCCGATGTTATCTAT 57.003 30.769 0.00 0.00 0.00 1.98
235 236 8.622948 AAATTCCTTTCCCGATGTTATCTATC 57.377 34.615 0.00 0.00 0.00 2.08
236 237 6.996180 TTCCTTTCCCGATGTTATCTATCT 57.004 37.500 0.00 0.00 0.00 1.98
237 238 6.996180 TCCTTTCCCGATGTTATCTATCTT 57.004 37.500 0.00 0.00 0.00 2.40
238 239 8.486942 TTCCTTTCCCGATGTTATCTATCTTA 57.513 34.615 0.00 0.00 0.00 2.10
239 240 8.486942 TCCTTTCCCGATGTTATCTATCTTAA 57.513 34.615 0.00 0.00 0.00 1.85
240 241 8.585881 TCCTTTCCCGATGTTATCTATCTTAAG 58.414 37.037 0.00 0.00 0.00 1.85
241 242 7.332182 CCTTTCCCGATGTTATCTATCTTAAGC 59.668 40.741 0.00 0.00 0.00 3.09
242 243 6.282199 TCCCGATGTTATCTATCTTAAGCC 57.718 41.667 0.00 0.00 0.00 4.35
243 244 5.778241 TCCCGATGTTATCTATCTTAAGCCA 59.222 40.000 0.00 0.00 0.00 4.75
244 245 6.269077 TCCCGATGTTATCTATCTTAAGCCAA 59.731 38.462 0.00 0.00 0.00 4.52
245 246 6.369065 CCCGATGTTATCTATCTTAAGCCAAC 59.631 42.308 0.00 0.00 0.00 3.77
246 247 7.155328 CCGATGTTATCTATCTTAAGCCAACT 58.845 38.462 0.00 0.00 0.00 3.16
247 248 7.657761 CCGATGTTATCTATCTTAAGCCAACTT 59.342 37.037 0.00 0.00 40.07 2.66
248 249 9.046296 CGATGTTATCTATCTTAAGCCAACTTT 57.954 33.333 0.00 0.00 37.33 2.66
251 252 9.959721 TGTTATCTATCTTAAGCCAACTTTCTT 57.040 29.630 0.00 0.00 37.33 2.52
256 257 9.654663 TCTATCTTAAGCCAACTTTCTTTCTAC 57.345 33.333 0.00 0.00 37.33 2.59
257 258 9.436957 CTATCTTAAGCCAACTTTCTTTCTACA 57.563 33.333 0.00 0.00 37.33 2.74
258 259 8.691661 ATCTTAAGCCAACTTTCTTTCTACAA 57.308 30.769 0.00 0.00 37.33 2.41
259 260 8.691661 TCTTAAGCCAACTTTCTTTCTACAAT 57.308 30.769 0.00 0.00 37.33 2.71
260 261 9.131791 TCTTAAGCCAACTTTCTTTCTACAATT 57.868 29.630 0.00 0.00 37.33 2.32
261 262 9.185192 CTTAAGCCAACTTTCTTTCTACAATTG 57.815 33.333 3.24 3.24 37.33 2.32
262 263 6.715347 AGCCAACTTTCTTTCTACAATTGT 57.285 33.333 16.68 16.68 0.00 2.71
263 264 7.112452 AGCCAACTTTCTTTCTACAATTGTT 57.888 32.000 17.78 0.95 0.00 2.83
264 265 8.232913 AGCCAACTTTCTTTCTACAATTGTTA 57.767 30.769 17.78 2.62 0.00 2.41
265 266 8.352942 AGCCAACTTTCTTTCTACAATTGTTAG 58.647 33.333 17.78 11.78 0.00 2.34
266 267 8.349983 GCCAACTTTCTTTCTACAATTGTTAGA 58.650 33.333 17.78 13.79 0.00 2.10
267 268 9.665264 CCAACTTTCTTTCTACAATTGTTAGAC 57.335 33.333 17.78 0.00 0.00 2.59
268 269 9.665264 CAACTTTCTTTCTACAATTGTTAGACC 57.335 33.333 17.78 0.00 0.00 3.85
269 270 8.084590 ACTTTCTTTCTACAATTGTTAGACCG 57.915 34.615 17.78 10.17 0.00 4.79
270 271 7.713942 ACTTTCTTTCTACAATTGTTAGACCGT 59.286 33.333 17.78 10.41 0.00 4.83
271 272 8.441312 TTTCTTTCTACAATTGTTAGACCGTT 57.559 30.769 17.78 0.00 0.00 4.44
272 273 8.441312 TTCTTTCTACAATTGTTAGACCGTTT 57.559 30.769 17.78 0.00 0.00 3.60
273 274 8.080083 TCTTTCTACAATTGTTAGACCGTTTC 57.920 34.615 17.78 0.00 0.00 2.78
274 275 7.711772 TCTTTCTACAATTGTTAGACCGTTTCA 59.288 33.333 17.78 0.00 0.00 2.69
275 276 7.789273 TTCTACAATTGTTAGACCGTTTCAA 57.211 32.000 17.78 0.00 0.00 2.69
276 277 7.972832 TCTACAATTGTTAGACCGTTTCAAT 57.027 32.000 17.78 0.00 0.00 2.57
277 278 9.491675 TTCTACAATTGTTAGACCGTTTCAATA 57.508 29.630 17.78 0.00 0.00 1.90
278 279 8.928733 TCTACAATTGTTAGACCGTTTCAATAC 58.071 33.333 17.78 0.00 0.00 1.89
279 280 7.499321 ACAATTGTTAGACCGTTTCAATACA 57.501 32.000 4.92 0.00 0.00 2.29
280 281 7.357303 ACAATTGTTAGACCGTTTCAATACAC 58.643 34.615 4.92 0.00 0.00 2.90
281 282 5.927954 TTGTTAGACCGTTTCAATACACC 57.072 39.130 0.00 0.00 0.00 4.16
282 283 4.317488 TGTTAGACCGTTTCAATACACCC 58.683 43.478 0.00 0.00 0.00 4.61
283 284 2.484742 AGACCGTTTCAATACACCCC 57.515 50.000 0.00 0.00 0.00 4.95
284 285 1.982958 AGACCGTTTCAATACACCCCT 59.017 47.619 0.00 0.00 0.00 4.79
285 286 2.374170 AGACCGTTTCAATACACCCCTT 59.626 45.455 0.00 0.00 0.00 3.95
286 287 3.583966 AGACCGTTTCAATACACCCCTTA 59.416 43.478 0.00 0.00 0.00 2.69
287 288 4.041938 AGACCGTTTCAATACACCCCTTAA 59.958 41.667 0.00 0.00 0.00 1.85
288 289 4.727677 ACCGTTTCAATACACCCCTTAAA 58.272 39.130 0.00 0.00 0.00 1.52
289 290 5.139001 ACCGTTTCAATACACCCCTTAAAA 58.861 37.500 0.00 0.00 0.00 1.52
290 291 5.597594 ACCGTTTCAATACACCCCTTAAAAA 59.402 36.000 0.00 0.00 0.00 1.94
314 315 9.467796 AAAAACTTAAATGGGAATTTTCACCAA 57.532 25.926 0.00 0.00 37.89 3.67
315 316 9.639563 AAAACTTAAATGGGAATTTTCACCAAT 57.360 25.926 0.00 0.00 37.89 3.16
322 323 9.639563 AAATGGGAATTTTCACCAATAAAAAGT 57.360 25.926 0.00 0.00 37.89 2.66
344 345 8.950208 AAGTATAAGATTTGTTAGACTCTGGC 57.050 34.615 0.00 0.00 34.17 4.85
345 346 7.203910 AGTATAAGATTTGTTAGACTCTGGCG 58.796 38.462 0.00 0.00 30.31 5.69
346 347 3.252974 AGATTTGTTAGACTCTGGCGG 57.747 47.619 0.00 0.00 0.00 6.13
347 348 2.567615 AGATTTGTTAGACTCTGGCGGT 59.432 45.455 0.00 0.00 0.00 5.68
348 349 2.163818 TTTGTTAGACTCTGGCGGTG 57.836 50.000 0.00 0.00 0.00 4.94
349 350 1.045407 TTGTTAGACTCTGGCGGTGT 58.955 50.000 0.00 0.00 0.00 4.16
350 351 1.913778 TGTTAGACTCTGGCGGTGTA 58.086 50.000 0.21 0.00 0.00 2.90
351 352 2.453521 TGTTAGACTCTGGCGGTGTAT 58.546 47.619 0.21 0.65 0.00 2.29
352 353 3.623703 TGTTAGACTCTGGCGGTGTATA 58.376 45.455 0.21 0.00 0.00 1.47
353 354 4.018490 TGTTAGACTCTGGCGGTGTATAA 58.982 43.478 10.59 10.59 0.00 0.98
354 355 4.142315 TGTTAGACTCTGGCGGTGTATAAC 60.142 45.833 26.87 26.87 41.98 1.89
355 356 2.453521 AGACTCTGGCGGTGTATAACA 58.546 47.619 0.21 0.00 0.00 2.41
356 357 3.031736 AGACTCTGGCGGTGTATAACAT 58.968 45.455 0.21 0.00 0.00 2.71
357 358 4.212716 AGACTCTGGCGGTGTATAACATA 58.787 43.478 0.21 0.00 0.00 2.29
358 359 4.647853 AGACTCTGGCGGTGTATAACATAA 59.352 41.667 0.21 0.00 0.00 1.90
359 360 4.690122 ACTCTGGCGGTGTATAACATAAC 58.310 43.478 0.00 0.00 0.00 1.89
360 361 4.404715 ACTCTGGCGGTGTATAACATAACT 59.595 41.667 0.00 0.00 0.00 2.24
361 362 4.940463 TCTGGCGGTGTATAACATAACTC 58.060 43.478 0.00 0.00 0.00 3.01
362 363 4.056050 CTGGCGGTGTATAACATAACTCC 58.944 47.826 0.00 0.00 0.00 3.85
365 366 3.645884 CGGTGTATAACATAACTCCGGG 58.354 50.000 0.00 0.00 44.73 5.73
366 367 3.553508 CGGTGTATAACATAACTCCGGGG 60.554 52.174 0.00 0.00 44.73 5.73
367 368 3.244318 GGTGTATAACATAACTCCGGGGG 60.244 52.174 6.13 0.00 0.00 5.40
368 369 2.369532 TGTATAACATAACTCCGGGGGC 59.630 50.000 6.13 0.00 0.00 5.80
369 370 0.395312 ATAACATAACTCCGGGGGCG 59.605 55.000 6.13 0.00 0.00 6.13
370 371 2.314415 TAACATAACTCCGGGGGCGC 62.314 60.000 6.13 0.00 0.00 6.53
371 372 4.169696 CATAACTCCGGGGGCGCA 62.170 66.667 10.83 0.00 0.00 6.09
372 373 4.171103 ATAACTCCGGGGGCGCAC 62.171 66.667 10.83 4.83 0.00 5.34
384 385 4.374702 GCGCACGGCACTGTTCTG 62.375 66.667 0.30 0.00 42.87 3.02
385 386 4.374702 CGCACGGCACTGTTCTGC 62.375 66.667 0.00 0.00 36.33 4.26
386 387 2.974698 GCACGGCACTGTTCTGCT 60.975 61.111 0.00 0.00 37.33 4.24
387 388 2.959357 GCACGGCACTGTTCTGCTC 61.959 63.158 0.00 0.00 37.33 4.26
388 389 1.595109 CACGGCACTGTTCTGCTCA 60.595 57.895 0.00 0.00 37.33 4.26
389 390 0.952497 CACGGCACTGTTCTGCTCAT 60.952 55.000 0.00 0.00 37.33 2.90
390 391 0.952497 ACGGCACTGTTCTGCTCATG 60.952 55.000 0.00 0.00 37.33 3.07
391 392 1.642037 CGGCACTGTTCTGCTCATGG 61.642 60.000 0.00 0.00 37.33 3.66
392 393 0.607489 GGCACTGTTCTGCTCATGGT 60.607 55.000 0.00 0.00 37.33 3.55
393 394 0.801251 GCACTGTTCTGCTCATGGTC 59.199 55.000 0.00 0.00 34.06 4.02
394 395 1.879372 GCACTGTTCTGCTCATGGTCA 60.879 52.381 0.00 0.00 34.06 4.02
395 396 2.074576 CACTGTTCTGCTCATGGTCAG 58.925 52.381 8.30 8.30 0.00 3.51
396 397 1.085091 CTGTTCTGCTCATGGTCAGC 58.915 55.000 9.38 4.44 37.40 4.26
397 398 0.689055 TGTTCTGCTCATGGTCAGCT 59.311 50.000 6.46 0.00 37.79 4.24
398 399 1.901833 TGTTCTGCTCATGGTCAGCTA 59.098 47.619 6.46 0.00 37.79 3.32
399 400 2.502947 TGTTCTGCTCATGGTCAGCTAT 59.497 45.455 6.46 0.00 37.79 2.97
400 401 2.871022 GTTCTGCTCATGGTCAGCTATG 59.129 50.000 6.46 0.00 37.79 2.23
401 402 2.113807 TCTGCTCATGGTCAGCTATGT 58.886 47.619 6.46 0.00 37.79 2.29
402 403 2.502947 TCTGCTCATGGTCAGCTATGTT 59.497 45.455 6.46 0.00 37.79 2.71
403 404 3.054875 TCTGCTCATGGTCAGCTATGTTT 60.055 43.478 6.46 0.00 37.79 2.83
404 405 4.162131 TCTGCTCATGGTCAGCTATGTTTA 59.838 41.667 6.46 0.00 37.79 2.01
405 406 4.445453 TGCTCATGGTCAGCTATGTTTAG 58.555 43.478 6.46 0.00 37.79 1.85
406 407 4.080919 TGCTCATGGTCAGCTATGTTTAGT 60.081 41.667 6.46 0.00 37.79 2.24
407 408 4.272018 GCTCATGGTCAGCTATGTTTAGTG 59.728 45.833 0.00 0.00 35.43 2.74
408 409 4.769688 TCATGGTCAGCTATGTTTAGTGG 58.230 43.478 0.00 0.00 35.43 4.00
409 410 3.627395 TGGTCAGCTATGTTTAGTGGG 57.373 47.619 0.00 0.00 0.00 4.61
410 411 3.178046 TGGTCAGCTATGTTTAGTGGGA 58.822 45.455 0.00 0.00 0.00 4.37
411 412 3.197766 TGGTCAGCTATGTTTAGTGGGAG 59.802 47.826 0.00 0.00 0.00 4.30
412 413 3.198872 GTCAGCTATGTTTAGTGGGAGC 58.801 50.000 0.00 0.00 0.00 4.70
413 414 2.170607 TCAGCTATGTTTAGTGGGAGCC 59.829 50.000 0.00 0.00 0.00 4.70
414 415 2.092968 CAGCTATGTTTAGTGGGAGCCA 60.093 50.000 0.00 0.00 0.00 4.75
415 416 2.780010 AGCTATGTTTAGTGGGAGCCAT 59.220 45.455 0.00 0.00 35.28 4.40
416 417 3.142174 GCTATGTTTAGTGGGAGCCATC 58.858 50.000 0.00 0.00 35.28 3.51
417 418 3.433598 GCTATGTTTAGTGGGAGCCATCA 60.434 47.826 0.00 0.00 35.28 3.07
418 419 3.737559 ATGTTTAGTGGGAGCCATCAA 57.262 42.857 0.00 0.00 35.28 2.57
419 420 3.517296 TGTTTAGTGGGAGCCATCAAA 57.483 42.857 0.00 0.00 35.28 2.69
420 421 3.420893 TGTTTAGTGGGAGCCATCAAAG 58.579 45.455 0.00 0.00 35.28 2.77
421 422 3.181434 TGTTTAGTGGGAGCCATCAAAGT 60.181 43.478 0.00 0.00 35.28 2.66
422 423 3.350219 TTAGTGGGAGCCATCAAAGTC 57.650 47.619 0.00 0.00 35.28 3.01
423 424 0.036010 AGTGGGAGCCATCAAAGTCG 60.036 55.000 0.00 0.00 35.28 4.18
424 425 0.036388 GTGGGAGCCATCAAAGTCGA 60.036 55.000 0.00 0.00 35.28 4.20
425 426 0.036388 TGGGAGCCATCAAAGTCGAC 60.036 55.000 7.70 7.70 0.00 4.20
426 427 0.744771 GGGAGCCATCAAAGTCGACC 60.745 60.000 13.01 0.00 0.00 4.79
427 428 0.744771 GGAGCCATCAAAGTCGACCC 60.745 60.000 13.01 0.00 0.00 4.46
428 429 0.036388 GAGCCATCAAAGTCGACCCA 60.036 55.000 13.01 0.00 0.00 4.51
429 430 0.321653 AGCCATCAAAGTCGACCCAC 60.322 55.000 13.01 0.00 0.00 4.61
430 431 1.305930 GCCATCAAAGTCGACCCACC 61.306 60.000 13.01 0.00 0.00 4.61
431 432 0.036164 CCATCAAAGTCGACCCACCA 59.964 55.000 13.01 0.00 0.00 4.17
432 433 1.544537 CCATCAAAGTCGACCCACCAA 60.545 52.381 13.01 0.00 0.00 3.67
433 434 2.226330 CATCAAAGTCGACCCACCAAA 58.774 47.619 13.01 0.00 0.00 3.28
434 435 2.649531 TCAAAGTCGACCCACCAAAT 57.350 45.000 13.01 0.00 0.00 2.32
435 436 2.226330 TCAAAGTCGACCCACCAAATG 58.774 47.619 13.01 0.40 0.00 2.32
436 437 1.953686 CAAAGTCGACCCACCAAATGT 59.046 47.619 13.01 0.00 0.00 2.71
437 438 2.358322 AAGTCGACCCACCAAATGTT 57.642 45.000 13.01 0.00 0.00 2.71
438 439 1.604604 AGTCGACCCACCAAATGTTG 58.395 50.000 13.01 0.00 0.00 3.33
439 440 1.133915 AGTCGACCCACCAAATGTTGT 60.134 47.619 13.01 0.00 0.00 3.32
440 441 1.265905 GTCGACCCACCAAATGTTGTC 59.734 52.381 3.51 0.00 0.00 3.18
441 442 0.237235 CGACCCACCAAATGTTGTCG 59.763 55.000 0.00 0.00 41.96 4.35
442 443 1.314730 GACCCACCAAATGTTGTCGT 58.685 50.000 0.00 0.00 0.00 4.34
443 444 1.001815 GACCCACCAAATGTTGTCGTG 60.002 52.381 0.00 0.00 0.00 4.35
444 445 0.313672 CCCACCAAATGTTGTCGTGG 59.686 55.000 8.59 8.59 40.51 4.94
445 446 0.318614 CCACCAAATGTTGTCGTGGC 60.319 55.000 4.24 0.00 36.60 5.01
446 447 0.318614 CACCAAATGTTGTCGTGGCC 60.319 55.000 0.00 0.00 34.27 5.36
447 448 0.467290 ACCAAATGTTGTCGTGGCCT 60.467 50.000 3.32 0.00 34.27 5.19
448 449 0.673437 CCAAATGTTGTCGTGGCCTT 59.327 50.000 3.32 0.00 0.00 4.35
449 450 1.335872 CCAAATGTTGTCGTGGCCTTC 60.336 52.381 3.32 0.00 0.00 3.46
450 451 0.958822 AAATGTTGTCGTGGCCTTCC 59.041 50.000 3.32 0.00 0.00 3.46
451 452 0.110486 AATGTTGTCGTGGCCTTCCT 59.890 50.000 3.32 0.00 0.00 3.36
452 453 0.606401 ATGTTGTCGTGGCCTTCCTG 60.606 55.000 3.32 0.00 0.00 3.86
453 454 2.281484 TTGTCGTGGCCTTCCTGC 60.281 61.111 3.32 0.00 0.00 4.85
477 478 2.096174 CCCGTAAGAACTCTCTCGTCTG 59.904 54.545 0.00 0.00 43.02 3.51
558 559 2.951813 ACCCTGGTGAGTCTCCCA 59.048 61.111 8.74 9.06 0.00 4.37
569 570 0.467384 AGTCTCCCATGCAAGATCCG 59.533 55.000 0.00 0.00 0.00 4.18
593 594 2.710096 TCCAATCCCGAATCCAACTC 57.290 50.000 0.00 0.00 0.00 3.01
620 621 3.875369 GCTCCCTGATTTCATTCACTGGT 60.875 47.826 0.00 0.00 0.00 4.00
638 639 3.185299 TTGCGGTTCGGGGTGACAT 62.185 57.895 0.00 0.00 0.00 3.06
639 640 3.124921 GCGGTTCGGGGTGACATG 61.125 66.667 0.00 0.00 0.00 3.21
640 641 2.660206 CGGTTCGGGGTGACATGA 59.340 61.111 0.00 0.00 0.00 3.07
641 642 1.220749 CGGTTCGGGGTGACATGAT 59.779 57.895 0.00 0.00 0.00 2.45
642 643 0.392461 CGGTTCGGGGTGACATGATT 60.392 55.000 0.00 0.00 0.00 2.57
643 644 1.834188 GGTTCGGGGTGACATGATTT 58.166 50.000 0.00 0.00 0.00 2.17
644 645 2.167662 GGTTCGGGGTGACATGATTTT 58.832 47.619 0.00 0.00 0.00 1.82
645 646 2.094752 GGTTCGGGGTGACATGATTTTG 60.095 50.000 0.00 0.00 0.00 2.44
646 647 1.832883 TCGGGGTGACATGATTTTGG 58.167 50.000 0.00 0.00 0.00 3.28
647 648 0.817013 CGGGGTGACATGATTTTGGG 59.183 55.000 0.00 0.00 0.00 4.12
648 649 1.194218 GGGGTGACATGATTTTGGGG 58.806 55.000 0.00 0.00 0.00 4.96
649 650 1.194218 GGGTGACATGATTTTGGGGG 58.806 55.000 0.00 0.00 0.00 5.40
650 651 1.272985 GGGTGACATGATTTTGGGGGA 60.273 52.381 0.00 0.00 0.00 4.81
651 652 2.102578 GGTGACATGATTTTGGGGGAG 58.897 52.381 0.00 0.00 0.00 4.30
652 653 1.478105 GTGACATGATTTTGGGGGAGC 59.522 52.381 0.00 0.00 0.00 4.70
653 654 1.076841 TGACATGATTTTGGGGGAGCA 59.923 47.619 0.00 0.00 0.00 4.26
654 655 1.478105 GACATGATTTTGGGGGAGCAC 59.522 52.381 0.00 0.00 0.00 4.40
655 656 1.203162 ACATGATTTTGGGGGAGCACA 60.203 47.619 0.00 0.00 0.00 4.57
656 657 1.479323 CATGATTTTGGGGGAGCACAG 59.521 52.381 0.00 0.00 0.00 3.66
657 658 0.776810 TGATTTTGGGGGAGCACAGA 59.223 50.000 0.00 0.00 0.00 3.41
707 708 0.897863 TCGGTGCTTGATTTTGGGGG 60.898 55.000 0.00 0.00 0.00 5.40
727 728 4.863707 CACAGATGGTGGGATCCG 57.136 61.111 5.45 0.00 44.04 4.18
821 822 2.114616 GGAGAAGGAGAAGAGATGCCA 58.885 52.381 0.00 0.00 0.00 4.92
823 824 3.494749 GGAGAAGGAGAAGAGATGCCATG 60.495 52.174 0.00 0.00 0.00 3.66
900 901 1.357907 CTTCTGAAGAAGCAGAGGCG 58.642 55.000 12.01 0.00 44.93 5.52
958 959 2.953466 CCTGAAATGGGCACTCATTG 57.047 50.000 0.00 0.00 37.42 2.82
973 974 4.520492 CACTCATTGGCAAGGTATTATCCC 59.480 45.833 12.03 0.00 0.00 3.85
1058 1059 3.366374 GGATTGACTGCAAAACCAGTAGC 60.366 47.826 0.00 0.00 45.55 3.58
1068 1069 3.275617 AAACCAGTAGCAGACAACACA 57.724 42.857 0.00 0.00 0.00 3.72
1101 1102 4.525912 ATTTGCTTCCCAATCAGACAAC 57.474 40.909 0.00 0.00 32.49 3.32
1102 1103 2.655090 TGCTTCCCAATCAGACAACA 57.345 45.000 0.00 0.00 0.00 3.33
1106 1107 4.344679 TGCTTCCCAATCAGACAACAAAAT 59.655 37.500 0.00 0.00 0.00 1.82
1107 1108 5.538053 TGCTTCCCAATCAGACAACAAAATA 59.462 36.000 0.00 0.00 0.00 1.40
1235 1236 2.175715 GGGCAAGGATAATGAACCCTCT 59.824 50.000 0.00 0.00 32.88 3.69
1262 1263 7.403312 TCGAATTGATGAATAAAACATGGGT 57.597 32.000 0.00 0.00 0.00 4.51
1265 1266 7.493499 AATTGATGAATAAAACATGGGTGGA 57.507 32.000 0.00 0.00 0.00 4.02
1283 1284 2.091885 TGGAATATCTGGGAGCCAAACC 60.092 50.000 0.00 0.00 30.80 3.27
1296 1297 1.181098 CCAAACCAGGCAAGGTGGAG 61.181 60.000 2.22 0.00 42.25 3.86
1392 1393 1.630369 CCTTTGAGGAGATGGGTCACA 59.370 52.381 0.00 0.00 37.67 3.58
1416 1417 2.708216 TCTCACAGAAACACAAGGCA 57.292 45.000 0.00 0.00 0.00 4.75
1428 1429 9.722056 CAGAAACACAAGGCAATAGAAATATAC 57.278 33.333 0.00 0.00 0.00 1.47
1471 1472 6.588719 TTCCCCATTATTGTTTCTCTTGTG 57.411 37.500 0.00 0.00 0.00 3.33
1510 1511 0.251297 TCTGGAATGCCCAACACCTG 60.251 55.000 0.00 0.00 46.07 4.00
1525 1526 2.324541 CACCTGGGGAGAGAGATAAGG 58.675 57.143 0.00 0.00 0.00 2.69
1537 1538 5.144832 AGAGAGATAAGGAGGGAAAGCTAC 58.855 45.833 0.00 0.00 0.00 3.58
1549 1550 4.412199 AGGGAAAGCTACCATACAATGCTA 59.588 41.667 11.20 0.00 33.28 3.49
1553 1554 7.447238 GGGAAAGCTACCATACAATGCTAATAA 59.553 37.037 11.20 0.00 33.28 1.40
1554 1555 8.846211 GGAAAGCTACCATACAATGCTAATAAA 58.154 33.333 5.17 0.00 33.28 1.40
1555 1556 9.665264 GAAAGCTACCATACAATGCTAATAAAC 57.335 33.333 0.00 0.00 33.28 2.01
1572 1573 9.608617 GCTAATAAACTGTGTTTTAAAGAGGAC 57.391 33.333 0.94 0.00 0.00 3.85
1595 1596 7.094377 GGACAAAAAGAAGTATGCCTCAATGTA 60.094 37.037 0.00 0.00 0.00 2.29
1598 1599 7.944729 AAAAGAAGTATGCCTCAATGTACAT 57.055 32.000 1.41 1.41 0.00 2.29
1604 1605 7.544804 AGTATGCCTCAATGTACATATCTGA 57.455 36.000 9.21 8.57 0.00 3.27
1689 1690 0.802494 CTCCAAAATCCAACGACGGG 59.198 55.000 0.00 0.00 0.00 5.28
1709 1710 3.780850 GGGGAAAGGAAGATAGAGGTGAA 59.219 47.826 0.00 0.00 0.00 3.18
1710 1711 4.413851 GGGGAAAGGAAGATAGAGGTGAAT 59.586 45.833 0.00 0.00 0.00 2.57
1719 1720 1.794714 TAGAGGTGAATGGGGCTCTC 58.205 55.000 0.00 0.00 0.00 3.20
1723 1724 1.048601 GGTGAATGGGGCTCTCGATA 58.951 55.000 0.00 0.00 0.00 2.92
1736 1737 3.304794 GCTCTCGATAAGGTTACATCGCT 60.305 47.826 0.00 0.00 42.87 4.93
1778 1779 9.308318 GCAAATCTACAAACAAAAAGGTAAGAA 57.692 29.630 0.00 0.00 0.00 2.52
1857 1858 1.202818 ACTGGGCAGAAGAGGAAACAC 60.203 52.381 0.00 0.00 0.00 3.32
1885 1886 3.451178 GGTGTATAGACTGAAAGGGCAGA 59.549 47.826 0.00 0.00 39.30 4.26
1943 1944 4.956075 CCCAAACCTGCCATTAATCTTAGT 59.044 41.667 0.00 0.00 0.00 2.24
1958 1959 0.978151 TTAGTAGGGCAGGACGCAAA 59.022 50.000 0.00 0.00 45.17 3.68
2050 2052 2.854253 TGGAACAAGGTGCTCTCCT 58.146 52.632 0.00 0.00 39.84 3.69
2060 2062 2.111384 GGTGCTCTCCTAACAGGATCA 58.889 52.381 0.00 0.00 44.81 2.92
2107 2112 2.126888 CCGCCACACGCAATGAAC 60.127 61.111 0.00 0.00 41.76 3.18
2116 2121 1.739466 CACGCAATGAACCTGCTATGT 59.261 47.619 0.00 0.00 37.67 2.29
2229 2234 3.312890 AGACGAAGATGAGGGATTCCAT 58.687 45.455 4.80 0.00 34.83 3.41
2367 2376 3.317430 GCCTTCTCCAAGCAGATTATTGG 59.683 47.826 0.00 0.00 46.09 3.16
2381 2390 7.707893 AGCAGATTATTGGCATCATTGTTAAAC 59.292 33.333 0.00 0.00 0.00 2.01
2406 2415 2.485659 AGAGGGCATTGAATGGAGAGA 58.514 47.619 7.35 0.00 0.00 3.10
2624 2633 0.918983 TGGCCTGGTAGATTTGGGAG 59.081 55.000 3.32 0.00 0.00 4.30
2655 2664 6.605594 GGTCCTAAATTCACATGGTCCAATAA 59.394 38.462 0.00 0.00 0.00 1.40
2665 2674 2.802719 TGGTCCAATAAACAAGAGGGC 58.197 47.619 0.00 0.00 0.00 5.19
2731 2740 4.872124 GGGGATTTCATGCAGATTTTTGAC 59.128 41.667 0.00 0.00 0.00 3.18
2742 2751 3.362831 CAGATTTTTGACGATTGCACAGC 59.637 43.478 0.00 0.00 0.00 4.40
2785 2794 5.916883 CACTTCGGATCATTATGCCATTTTC 59.083 40.000 0.00 0.00 0.00 2.29
2797 2806 2.816672 TGCCATTTTCGTGACAATAGCA 59.183 40.909 0.00 0.00 0.00 3.49
2817 2826 4.074970 GCAAGAAGAGATGAAAAGGTCCA 58.925 43.478 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.815615 GGATGGATCAAGGACGTGCC 60.816 60.000 2.38 0.00 0.00 5.01
1 2 0.107703 TGGATGGATCAAGGACGTGC 60.108 55.000 0.00 0.00 0.00 5.34
2 3 2.283298 CTTGGATGGATCAAGGACGTG 58.717 52.381 0.00 0.00 38.26 4.49
3 4 2.698855 CTTGGATGGATCAAGGACGT 57.301 50.000 0.00 0.00 38.26 4.34
8 9 7.886629 TTTATTTCTCCTTGGATGGATCAAG 57.113 36.000 0.00 0.00 40.75 3.02
9 10 9.578576 CTATTTATTTCTCCTTGGATGGATCAA 57.421 33.333 0.00 0.00 35.30 2.57
10 11 7.667219 GCTATTTATTTCTCCTTGGATGGATCA 59.333 37.037 0.00 0.00 35.30 2.92
11 12 7.887495 AGCTATTTATTTCTCCTTGGATGGATC 59.113 37.037 0.00 0.00 35.30 3.36
12 13 7.763613 AGCTATTTATTTCTCCTTGGATGGAT 58.236 34.615 0.00 0.00 35.30 3.41
13 14 7.154191 AGCTATTTATTTCTCCTTGGATGGA 57.846 36.000 0.00 0.00 34.52 3.41
14 15 7.120432 GCTAGCTATTTATTTCTCCTTGGATGG 59.880 40.741 7.70 0.00 0.00 3.51
15 16 7.882271 AGCTAGCTATTTATTTCTCCTTGGATG 59.118 37.037 17.69 0.00 0.00 3.51
16 17 7.882271 CAGCTAGCTATTTATTTCTCCTTGGAT 59.118 37.037 18.86 0.00 0.00 3.41
17 18 7.147479 ACAGCTAGCTATTTATTTCTCCTTGGA 60.147 37.037 18.86 0.00 0.00 3.53
18 19 6.995091 ACAGCTAGCTATTTATTTCTCCTTGG 59.005 38.462 18.86 0.83 0.00 3.61
19 20 8.341173 CAACAGCTAGCTATTTATTTCTCCTTG 58.659 37.037 18.86 2.26 0.00 3.61
20 21 8.267894 TCAACAGCTAGCTATTTATTTCTCCTT 58.732 33.333 18.86 0.00 0.00 3.36
21 22 7.796054 TCAACAGCTAGCTATTTATTTCTCCT 58.204 34.615 18.86 0.00 0.00 3.69
22 23 7.172361 CCTCAACAGCTAGCTATTTATTTCTCC 59.828 40.741 18.86 0.00 0.00 3.71
23 24 7.713073 ACCTCAACAGCTAGCTATTTATTTCTC 59.287 37.037 18.86 0.00 0.00 2.87
24 25 7.569240 ACCTCAACAGCTAGCTATTTATTTCT 58.431 34.615 18.86 0.00 0.00 2.52
25 26 7.306866 CGACCTCAACAGCTAGCTATTTATTTC 60.307 40.741 18.86 8.70 0.00 2.17
26 27 6.480320 CGACCTCAACAGCTAGCTATTTATTT 59.520 38.462 18.86 0.00 0.00 1.40
27 28 5.986135 CGACCTCAACAGCTAGCTATTTATT 59.014 40.000 18.86 4.31 0.00 1.40
28 29 5.302059 TCGACCTCAACAGCTAGCTATTTAT 59.698 40.000 18.86 0.00 0.00 1.40
29 30 4.643334 TCGACCTCAACAGCTAGCTATTTA 59.357 41.667 18.86 2.69 0.00 1.40
30 31 3.447586 TCGACCTCAACAGCTAGCTATTT 59.552 43.478 18.86 10.95 0.00 1.40
31 32 3.024547 TCGACCTCAACAGCTAGCTATT 58.975 45.455 18.86 10.35 0.00 1.73
32 33 2.359531 GTCGACCTCAACAGCTAGCTAT 59.640 50.000 18.86 2.05 0.00 2.97
33 34 1.743958 GTCGACCTCAACAGCTAGCTA 59.256 52.381 18.86 0.00 0.00 3.32
34 35 0.528470 GTCGACCTCAACAGCTAGCT 59.472 55.000 12.68 12.68 0.00 3.32
35 36 0.243907 TGTCGACCTCAACAGCTAGC 59.756 55.000 14.12 6.62 0.00 3.42
36 37 2.724977 TTGTCGACCTCAACAGCTAG 57.275 50.000 14.12 0.00 0.00 3.42
37 38 2.101750 TGTTTGTCGACCTCAACAGCTA 59.898 45.455 14.12 0.00 0.00 3.32
38 39 1.134521 TGTTTGTCGACCTCAACAGCT 60.135 47.619 14.12 0.00 0.00 4.24
39 40 1.003866 GTGTTTGTCGACCTCAACAGC 60.004 52.381 19.69 13.25 0.00 4.40
40 41 2.276201 TGTGTTTGTCGACCTCAACAG 58.724 47.619 19.69 0.00 0.00 3.16
41 42 2.388310 TGTGTTTGTCGACCTCAACA 57.612 45.000 14.12 15.77 0.00 3.33
42 43 3.064820 ACAATGTGTTTGTCGACCTCAAC 59.935 43.478 14.12 13.40 45.55 3.18
43 44 3.275143 ACAATGTGTTTGTCGACCTCAA 58.725 40.909 14.12 0.08 45.55 3.02
44 45 2.912771 ACAATGTGTTTGTCGACCTCA 58.087 42.857 14.12 6.71 45.55 3.86
55 56 6.934083 ACTCAAAACAGGAAAAACAATGTGTT 59.066 30.769 0.00 0.00 43.41 3.32
56 57 6.463360 ACTCAAAACAGGAAAAACAATGTGT 58.537 32.000 0.00 0.00 0.00 3.72
57 58 6.035975 GGACTCAAAACAGGAAAAACAATGTG 59.964 38.462 0.00 0.00 0.00 3.21
58 59 6.106003 GGACTCAAAACAGGAAAAACAATGT 58.894 36.000 0.00 0.00 0.00 2.71
59 60 6.105333 TGGACTCAAAACAGGAAAAACAATG 58.895 36.000 0.00 0.00 0.00 2.82
60 61 6.154363 TCTGGACTCAAAACAGGAAAAACAAT 59.846 34.615 0.00 0.00 33.19 2.71
61 62 5.478679 TCTGGACTCAAAACAGGAAAAACAA 59.521 36.000 0.00 0.00 33.19 2.83
62 63 5.013547 TCTGGACTCAAAACAGGAAAAACA 58.986 37.500 0.00 0.00 33.19 2.83
63 64 5.576447 TCTGGACTCAAAACAGGAAAAAC 57.424 39.130 0.00 0.00 33.19 2.43
64 65 5.714806 AGTTCTGGACTCAAAACAGGAAAAA 59.285 36.000 0.00 0.00 31.20 1.94
65 66 5.125417 CAGTTCTGGACTCAAAACAGGAAAA 59.875 40.000 0.00 0.00 36.10 2.29
66 67 4.640201 CAGTTCTGGACTCAAAACAGGAAA 59.360 41.667 0.00 0.00 36.10 3.13
67 68 4.199310 CAGTTCTGGACTCAAAACAGGAA 58.801 43.478 0.00 0.00 36.10 3.36
68 69 3.808728 CAGTTCTGGACTCAAAACAGGA 58.191 45.455 0.00 0.00 36.10 3.86
69 70 2.291741 GCAGTTCTGGACTCAAAACAGG 59.708 50.000 1.97 0.00 36.10 4.00
70 71 3.209410 AGCAGTTCTGGACTCAAAACAG 58.791 45.455 1.97 0.00 36.10 3.16
71 72 3.206150 GAGCAGTTCTGGACTCAAAACA 58.794 45.455 1.97 0.00 36.10 2.83
72 73 2.550180 GGAGCAGTTCTGGACTCAAAAC 59.450 50.000 1.97 0.00 36.10 2.43
73 74 2.439507 AGGAGCAGTTCTGGACTCAAAA 59.560 45.455 1.97 0.00 36.10 2.44
74 75 2.050144 AGGAGCAGTTCTGGACTCAAA 58.950 47.619 1.97 0.00 36.10 2.69
75 76 1.722034 AGGAGCAGTTCTGGACTCAA 58.278 50.000 1.97 0.00 36.10 3.02
76 77 2.171840 GTAGGAGCAGTTCTGGACTCA 58.828 52.381 1.97 0.00 36.10 3.41
77 78 2.452505 AGTAGGAGCAGTTCTGGACTC 58.547 52.381 1.97 1.34 36.10 3.36
78 79 2.564947 CAAGTAGGAGCAGTTCTGGACT 59.435 50.000 1.97 0.00 39.89 3.85
79 80 2.300437 ACAAGTAGGAGCAGTTCTGGAC 59.700 50.000 1.97 0.00 0.00 4.02
80 81 2.609747 ACAAGTAGGAGCAGTTCTGGA 58.390 47.619 1.97 0.00 0.00 3.86
81 82 3.511934 AGTACAAGTAGGAGCAGTTCTGG 59.488 47.826 0.00 0.00 0.00 3.86
82 83 4.792521 AGTACAAGTAGGAGCAGTTCTG 57.207 45.455 0.00 0.00 0.00 3.02
83 84 6.188407 TCATAGTACAAGTAGGAGCAGTTCT 58.812 40.000 0.00 0.00 0.00 3.01
84 85 6.452494 TCATAGTACAAGTAGGAGCAGTTC 57.548 41.667 0.00 0.00 0.00 3.01
85 86 6.607600 TCATCATAGTACAAGTAGGAGCAGTT 59.392 38.462 0.00 0.00 0.00 3.16
86 87 6.129874 TCATCATAGTACAAGTAGGAGCAGT 58.870 40.000 0.00 0.00 0.00 4.40
87 88 6.641169 TCATCATAGTACAAGTAGGAGCAG 57.359 41.667 0.00 0.00 0.00 4.24
88 89 7.603180 ATTCATCATAGTACAAGTAGGAGCA 57.397 36.000 0.00 0.00 0.00 4.26
149 150 9.912634 CACAGTTTATGAGACCAACATTTTTAT 57.087 29.630 0.00 0.00 0.00 1.40
150 151 9.126151 TCACAGTTTATGAGACCAACATTTTTA 57.874 29.630 0.00 0.00 0.00 1.52
151 152 8.006298 TCACAGTTTATGAGACCAACATTTTT 57.994 30.769 0.00 0.00 0.00 1.94
152 153 7.581213 TCACAGTTTATGAGACCAACATTTT 57.419 32.000 0.00 0.00 0.00 1.82
153 154 7.285401 AGTTCACAGTTTATGAGACCAACATTT 59.715 33.333 0.00 0.00 0.00 2.32
154 155 6.772716 AGTTCACAGTTTATGAGACCAACATT 59.227 34.615 0.00 0.00 0.00 2.71
155 156 6.299141 AGTTCACAGTTTATGAGACCAACAT 58.701 36.000 0.00 0.00 0.00 2.71
156 157 5.680619 AGTTCACAGTTTATGAGACCAACA 58.319 37.500 0.00 0.00 0.00 3.33
157 158 5.179555 GGAGTTCACAGTTTATGAGACCAAC 59.820 44.000 0.00 0.00 0.00 3.77
158 159 5.305585 GGAGTTCACAGTTTATGAGACCAA 58.694 41.667 0.00 0.00 0.00 3.67
159 160 4.262894 GGGAGTTCACAGTTTATGAGACCA 60.263 45.833 0.00 0.00 0.00 4.02
160 161 4.254492 GGGAGTTCACAGTTTATGAGACC 58.746 47.826 0.00 0.00 0.00 3.85
161 162 4.254492 GGGGAGTTCACAGTTTATGAGAC 58.746 47.826 0.00 0.00 0.00 3.36
162 163 3.263425 GGGGGAGTTCACAGTTTATGAGA 59.737 47.826 0.00 0.00 0.00 3.27
163 164 3.009033 TGGGGGAGTTCACAGTTTATGAG 59.991 47.826 0.00 0.00 0.00 2.90
164 165 2.983192 TGGGGGAGTTCACAGTTTATGA 59.017 45.455 0.00 0.00 0.00 2.15
165 166 3.433306 TGGGGGAGTTCACAGTTTATG 57.567 47.619 0.00 0.00 0.00 1.90
166 167 4.538490 TGTATGGGGGAGTTCACAGTTTAT 59.462 41.667 0.00 0.00 0.00 1.40
167 168 3.911260 TGTATGGGGGAGTTCACAGTTTA 59.089 43.478 0.00 0.00 0.00 2.01
168 169 2.714250 TGTATGGGGGAGTTCACAGTTT 59.286 45.455 0.00 0.00 0.00 2.66
169 170 2.344592 TGTATGGGGGAGTTCACAGTT 58.655 47.619 0.00 0.00 0.00 3.16
170 171 2.038863 TGTATGGGGGAGTTCACAGT 57.961 50.000 0.00 0.00 0.00 3.55
171 172 3.652057 ATTGTATGGGGGAGTTCACAG 57.348 47.619 0.00 0.00 0.00 3.66
172 173 4.396357 AAATTGTATGGGGGAGTTCACA 57.604 40.909 0.00 0.00 0.00 3.58
173 174 5.506708 AGTAAATTGTATGGGGGAGTTCAC 58.493 41.667 0.00 0.00 0.00 3.18
174 175 5.339695 GGAGTAAATTGTATGGGGGAGTTCA 60.340 44.000 0.00 0.00 0.00 3.18
175 176 5.131067 GGAGTAAATTGTATGGGGGAGTTC 58.869 45.833 0.00 0.00 0.00 3.01
176 177 4.384868 CGGAGTAAATTGTATGGGGGAGTT 60.385 45.833 0.00 0.00 0.00 3.01
177 178 3.135895 CGGAGTAAATTGTATGGGGGAGT 59.864 47.826 0.00 0.00 0.00 3.85
178 179 3.496160 CCGGAGTAAATTGTATGGGGGAG 60.496 52.174 0.00 0.00 0.00 4.30
179 180 2.440253 CCGGAGTAAATTGTATGGGGGA 59.560 50.000 0.00 0.00 0.00 4.81
180 181 2.858745 CCGGAGTAAATTGTATGGGGG 58.141 52.381 0.00 0.00 0.00 5.40
181 182 2.227194 GCCGGAGTAAATTGTATGGGG 58.773 52.381 5.05 0.00 0.00 4.96
182 183 2.878406 CTGCCGGAGTAAATTGTATGGG 59.122 50.000 5.05 0.00 0.00 4.00
183 184 3.804036 TCTGCCGGAGTAAATTGTATGG 58.196 45.455 5.05 0.00 0.00 2.74
184 185 7.490962 TTTATCTGCCGGAGTAAATTGTATG 57.509 36.000 5.05 0.00 0.00 2.39
185 186 8.514330 TTTTTATCTGCCGGAGTAAATTGTAT 57.486 30.769 5.05 0.00 0.00 2.29
186 187 7.925043 TTTTTATCTGCCGGAGTAAATTGTA 57.075 32.000 5.05 0.00 0.00 2.41
187 188 6.827586 TTTTTATCTGCCGGAGTAAATTGT 57.172 33.333 5.05 0.00 0.00 2.71
208 209 7.718334 AGATAACATCGGGAAAGGAATTTTT 57.282 32.000 0.00 0.00 0.00 1.94
209 210 8.996651 ATAGATAACATCGGGAAAGGAATTTT 57.003 30.769 0.00 0.00 0.00 1.82
210 211 8.440771 AGATAGATAACATCGGGAAAGGAATTT 58.559 33.333 0.00 0.00 0.00 1.82
211 212 7.978925 AGATAGATAACATCGGGAAAGGAATT 58.021 34.615 0.00 0.00 0.00 2.17
212 213 7.560796 AGATAGATAACATCGGGAAAGGAAT 57.439 36.000 0.00 0.00 0.00 3.01
213 214 6.996180 AGATAGATAACATCGGGAAAGGAA 57.004 37.500 0.00 0.00 0.00 3.36
214 215 6.996180 AAGATAGATAACATCGGGAAAGGA 57.004 37.500 0.00 0.00 0.00 3.36
215 216 7.332182 GCTTAAGATAGATAACATCGGGAAAGG 59.668 40.741 6.67 0.00 0.00 3.11
216 217 7.332182 GGCTTAAGATAGATAACATCGGGAAAG 59.668 40.741 6.67 0.00 0.00 2.62
217 218 7.159372 GGCTTAAGATAGATAACATCGGGAAA 58.841 38.462 6.67 0.00 0.00 3.13
218 219 6.269077 TGGCTTAAGATAGATAACATCGGGAA 59.731 38.462 6.67 0.00 0.00 3.97
219 220 5.778241 TGGCTTAAGATAGATAACATCGGGA 59.222 40.000 6.67 0.00 0.00 5.14
220 221 6.037786 TGGCTTAAGATAGATAACATCGGG 57.962 41.667 6.67 0.00 0.00 5.14
221 222 7.155328 AGTTGGCTTAAGATAGATAACATCGG 58.845 38.462 6.67 0.00 0.00 4.18
222 223 8.594881 AAGTTGGCTTAAGATAGATAACATCG 57.405 34.615 6.67 0.00 32.27 3.84
225 226 9.959721 AAGAAAGTTGGCTTAAGATAGATAACA 57.040 29.630 6.67 0.00 33.95 2.41
230 231 9.654663 GTAGAAAGAAAGTTGGCTTAAGATAGA 57.345 33.333 6.67 0.00 33.95 1.98
231 232 9.436957 TGTAGAAAGAAAGTTGGCTTAAGATAG 57.563 33.333 6.67 0.00 33.95 2.08
232 233 9.787435 TTGTAGAAAGAAAGTTGGCTTAAGATA 57.213 29.630 6.67 0.00 33.95 1.98
233 234 8.691661 TTGTAGAAAGAAAGTTGGCTTAAGAT 57.308 30.769 6.67 0.00 33.95 2.40
234 235 8.691661 ATTGTAGAAAGAAAGTTGGCTTAAGA 57.308 30.769 6.67 0.00 33.95 2.10
235 236 9.185192 CAATTGTAGAAAGAAAGTTGGCTTAAG 57.815 33.333 0.00 0.00 33.95 1.85
236 237 8.691797 ACAATTGTAGAAAGAAAGTTGGCTTAA 58.308 29.630 9.97 0.00 33.95 1.85
237 238 8.232913 ACAATTGTAGAAAGAAAGTTGGCTTA 57.767 30.769 9.97 0.00 33.95 3.09
238 239 7.112452 ACAATTGTAGAAAGAAAGTTGGCTT 57.888 32.000 9.97 0.00 36.30 4.35
239 240 6.715347 ACAATTGTAGAAAGAAAGTTGGCT 57.285 33.333 9.97 0.00 0.00 4.75
240 241 8.349983 TCTAACAATTGTAGAAAGAAAGTTGGC 58.650 33.333 12.39 0.00 0.00 4.52
241 242 9.665264 GTCTAACAATTGTAGAAAGAAAGTTGG 57.335 33.333 12.39 0.00 0.00 3.77
242 243 9.665264 GGTCTAACAATTGTAGAAAGAAAGTTG 57.335 33.333 12.39 0.00 0.00 3.16
243 244 8.557029 CGGTCTAACAATTGTAGAAAGAAAGTT 58.443 33.333 12.39 0.00 0.00 2.66
244 245 7.713942 ACGGTCTAACAATTGTAGAAAGAAAGT 59.286 33.333 12.39 11.82 0.00 2.66
245 246 8.084590 ACGGTCTAACAATTGTAGAAAGAAAG 57.915 34.615 12.39 11.31 0.00 2.62
246 247 8.441312 AACGGTCTAACAATTGTAGAAAGAAA 57.559 30.769 12.39 0.00 0.00 2.52
247 248 8.441312 AAACGGTCTAACAATTGTAGAAAGAA 57.559 30.769 12.39 0.00 0.00 2.52
248 249 7.711772 TGAAACGGTCTAACAATTGTAGAAAGA 59.288 33.333 12.39 9.72 0.00 2.52
249 250 7.857569 TGAAACGGTCTAACAATTGTAGAAAG 58.142 34.615 12.39 12.98 0.00 2.62
250 251 7.789273 TGAAACGGTCTAACAATTGTAGAAA 57.211 32.000 12.39 0.00 0.00 2.52
251 252 7.789273 TTGAAACGGTCTAACAATTGTAGAA 57.211 32.000 12.39 0.00 0.00 2.10
252 253 7.972832 ATTGAAACGGTCTAACAATTGTAGA 57.027 32.000 12.39 11.77 0.00 2.59
253 254 8.714179 TGTATTGAAACGGTCTAACAATTGTAG 58.286 33.333 12.39 9.70 33.99 2.74
254 255 8.497554 GTGTATTGAAACGGTCTAACAATTGTA 58.502 33.333 12.39 0.00 33.99 2.41
255 256 7.357303 GTGTATTGAAACGGTCTAACAATTGT 58.643 34.615 4.92 4.92 33.99 2.71
256 257 6.799925 GGTGTATTGAAACGGTCTAACAATTG 59.200 38.462 3.24 3.24 33.99 2.32
257 258 6.072342 GGGTGTATTGAAACGGTCTAACAATT 60.072 38.462 0.00 0.00 33.99 2.32
258 259 5.413523 GGGTGTATTGAAACGGTCTAACAAT 59.586 40.000 0.00 0.00 35.73 2.71
259 260 4.756135 GGGTGTATTGAAACGGTCTAACAA 59.244 41.667 0.00 0.00 0.00 2.83
260 261 4.317488 GGGTGTATTGAAACGGTCTAACA 58.683 43.478 0.00 0.00 0.00 2.41
261 262 3.686241 GGGGTGTATTGAAACGGTCTAAC 59.314 47.826 0.00 0.00 0.00 2.34
262 263 3.583966 AGGGGTGTATTGAAACGGTCTAA 59.416 43.478 0.00 0.00 0.00 2.10
263 264 3.175594 AGGGGTGTATTGAAACGGTCTA 58.824 45.455 0.00 0.00 0.00 2.59
264 265 1.982958 AGGGGTGTATTGAAACGGTCT 59.017 47.619 0.00 0.00 0.00 3.85
265 266 2.484742 AGGGGTGTATTGAAACGGTC 57.515 50.000 0.00 0.00 0.00 4.79
266 267 2.963599 AAGGGGTGTATTGAAACGGT 57.036 45.000 0.00 0.00 0.00 4.83
267 268 5.708877 TTTTAAGGGGTGTATTGAAACGG 57.291 39.130 0.00 0.00 0.00 4.44
288 289 9.467796 TTGGTGAAAATTCCCATTTAAGTTTTT 57.532 25.926 4.80 0.00 31.89 1.94
289 290 9.639563 ATTGGTGAAAATTCCCATTTAAGTTTT 57.360 25.926 4.80 0.00 31.89 2.43
296 297 9.639563 ACTTTTTATTGGTGAAAATTCCCATTT 57.360 25.926 4.80 0.00 33.72 2.32
318 319 9.384764 GCCAGAGTCTAACAAATCTTATACTTT 57.615 33.333 0.00 0.00 0.00 2.66
319 320 7.707035 CGCCAGAGTCTAACAAATCTTATACTT 59.293 37.037 0.00 0.00 0.00 2.24
320 321 7.203910 CGCCAGAGTCTAACAAATCTTATACT 58.796 38.462 0.00 0.00 0.00 2.12
321 322 6.421202 CCGCCAGAGTCTAACAAATCTTATAC 59.579 42.308 0.00 0.00 0.00 1.47
322 323 6.097839 ACCGCCAGAGTCTAACAAATCTTATA 59.902 38.462 0.00 0.00 0.00 0.98
323 324 5.104900 ACCGCCAGAGTCTAACAAATCTTAT 60.105 40.000 0.00 0.00 0.00 1.73
324 325 4.222145 ACCGCCAGAGTCTAACAAATCTTA 59.778 41.667 0.00 0.00 0.00 2.10
325 326 3.008049 ACCGCCAGAGTCTAACAAATCTT 59.992 43.478 0.00 0.00 0.00 2.40
326 327 2.567615 ACCGCCAGAGTCTAACAAATCT 59.432 45.455 0.00 0.00 0.00 2.40
327 328 2.673368 CACCGCCAGAGTCTAACAAATC 59.327 50.000 0.00 0.00 0.00 2.17
328 329 2.038557 ACACCGCCAGAGTCTAACAAAT 59.961 45.455 0.00 0.00 0.00 2.32
329 330 1.414919 ACACCGCCAGAGTCTAACAAA 59.585 47.619 0.00 0.00 0.00 2.83
330 331 1.045407 ACACCGCCAGAGTCTAACAA 58.955 50.000 0.00 0.00 0.00 2.83
331 332 1.913778 TACACCGCCAGAGTCTAACA 58.086 50.000 0.00 0.00 0.00 2.41
332 333 4.142315 TGTTATACACCGCCAGAGTCTAAC 60.142 45.833 0.00 0.00 0.00 2.34
333 334 4.018490 TGTTATACACCGCCAGAGTCTAA 58.982 43.478 0.00 0.00 0.00 2.10
334 335 3.623703 TGTTATACACCGCCAGAGTCTA 58.376 45.455 0.00 0.00 0.00 2.59
335 336 2.453521 TGTTATACACCGCCAGAGTCT 58.546 47.619 0.00 0.00 0.00 3.24
336 337 2.953466 TGTTATACACCGCCAGAGTC 57.047 50.000 0.00 0.00 0.00 3.36
337 338 4.404715 AGTTATGTTATACACCGCCAGAGT 59.595 41.667 0.00 0.00 0.00 3.24
338 339 4.945246 AGTTATGTTATACACCGCCAGAG 58.055 43.478 0.00 0.00 0.00 3.35
339 340 4.202182 GGAGTTATGTTATACACCGCCAGA 60.202 45.833 0.00 0.00 0.00 3.86
340 341 4.056050 GGAGTTATGTTATACACCGCCAG 58.944 47.826 0.00 0.00 0.00 4.85
341 342 3.491276 CGGAGTTATGTTATACACCGCCA 60.491 47.826 0.00 0.00 40.55 5.69
342 343 3.054878 CGGAGTTATGTTATACACCGCC 58.945 50.000 0.00 0.00 40.55 6.13
343 344 3.054878 CCGGAGTTATGTTATACACCGC 58.945 50.000 0.00 0.00 43.94 5.68
344 345 3.553508 CCCCGGAGTTATGTTATACACCG 60.554 52.174 0.73 0.00 44.58 4.94
345 346 3.244318 CCCCCGGAGTTATGTTATACACC 60.244 52.174 0.73 0.00 0.00 4.16
346 347 3.804759 GCCCCCGGAGTTATGTTATACAC 60.805 52.174 0.73 0.00 0.00 2.90
347 348 2.369532 GCCCCCGGAGTTATGTTATACA 59.630 50.000 0.73 0.00 0.00 2.29
348 349 2.611224 CGCCCCCGGAGTTATGTTATAC 60.611 54.545 0.73 0.00 0.00 1.47
349 350 1.619827 CGCCCCCGGAGTTATGTTATA 59.380 52.381 0.73 0.00 0.00 0.98
350 351 0.395312 CGCCCCCGGAGTTATGTTAT 59.605 55.000 0.73 0.00 0.00 1.89
351 352 1.824658 CGCCCCCGGAGTTATGTTA 59.175 57.895 0.73 0.00 0.00 2.41
352 353 2.587889 CGCCCCCGGAGTTATGTT 59.412 61.111 0.73 0.00 0.00 2.71
353 354 4.171103 GCGCCCCCGGAGTTATGT 62.171 66.667 0.73 0.00 34.32 2.29
354 355 4.169696 TGCGCCCCCGGAGTTATG 62.170 66.667 0.73 0.00 34.32 1.90
355 356 4.171103 GTGCGCCCCCGGAGTTAT 62.171 66.667 0.73 0.00 34.75 1.89
367 368 4.374702 CAGAACAGTGCCGTGCGC 62.375 66.667 0.00 0.00 39.59 6.09
368 369 4.374702 GCAGAACAGTGCCGTGCG 62.375 66.667 0.00 0.00 37.49 5.34
369 370 2.959357 GAGCAGAACAGTGCCGTGC 61.959 63.158 3.56 3.56 45.20 5.34
370 371 0.952497 ATGAGCAGAACAGTGCCGTG 60.952 55.000 0.00 0.00 45.20 4.94
371 372 0.952497 CATGAGCAGAACAGTGCCGT 60.952 55.000 0.00 0.00 45.20 5.68
372 373 1.642037 CCATGAGCAGAACAGTGCCG 61.642 60.000 0.00 0.00 45.20 5.69
373 374 0.607489 ACCATGAGCAGAACAGTGCC 60.607 55.000 0.00 0.00 45.20 5.01
374 375 0.801251 GACCATGAGCAGAACAGTGC 59.199 55.000 0.00 0.00 44.35 4.40
375 376 2.074576 CTGACCATGAGCAGAACAGTG 58.925 52.381 8.56 0.00 34.06 3.66
376 377 1.610102 GCTGACCATGAGCAGAACAGT 60.610 52.381 16.02 0.00 36.40 3.55
377 378 1.085091 GCTGACCATGAGCAGAACAG 58.915 55.000 16.02 0.00 36.40 3.16
378 379 0.689055 AGCTGACCATGAGCAGAACA 59.311 50.000 16.02 0.00 39.05 3.18
379 380 2.680312 TAGCTGACCATGAGCAGAAC 57.320 50.000 16.02 2.84 39.05 3.01
380 381 2.502947 ACATAGCTGACCATGAGCAGAA 59.497 45.455 16.02 6.05 39.05 3.02
381 382 2.113807 ACATAGCTGACCATGAGCAGA 58.886 47.619 16.02 1.58 39.05 4.26
382 383 2.616634 ACATAGCTGACCATGAGCAG 57.383 50.000 7.54 8.63 39.05 4.24
383 384 3.354948 AAACATAGCTGACCATGAGCA 57.645 42.857 7.54 0.00 39.05 4.26
384 385 4.272018 CACTAAACATAGCTGACCATGAGC 59.728 45.833 0.00 0.00 36.65 4.26
385 386 4.813161 CCACTAAACATAGCTGACCATGAG 59.187 45.833 0.00 0.00 0.00 2.90
386 387 4.384098 CCCACTAAACATAGCTGACCATGA 60.384 45.833 0.00 0.00 0.00 3.07
387 388 3.879295 CCCACTAAACATAGCTGACCATG 59.121 47.826 0.00 0.00 0.00 3.66
388 389 3.780294 TCCCACTAAACATAGCTGACCAT 59.220 43.478 0.00 0.00 0.00 3.55
389 390 3.178046 TCCCACTAAACATAGCTGACCA 58.822 45.455 0.00 0.00 0.00 4.02
390 391 3.798202 CTCCCACTAAACATAGCTGACC 58.202 50.000 0.00 0.00 0.00 4.02
391 392 3.198872 GCTCCCACTAAACATAGCTGAC 58.801 50.000 0.00 0.00 0.00 3.51
392 393 2.170607 GGCTCCCACTAAACATAGCTGA 59.829 50.000 0.00 0.00 0.00 4.26
393 394 2.092968 TGGCTCCCACTAAACATAGCTG 60.093 50.000 0.00 0.00 0.00 4.24
394 395 2.196595 TGGCTCCCACTAAACATAGCT 58.803 47.619 0.00 0.00 0.00 3.32
395 396 2.710096 TGGCTCCCACTAAACATAGC 57.290 50.000 0.00 0.00 0.00 2.97
396 397 4.422073 TGATGGCTCCCACTAAACATAG 57.578 45.455 0.00 0.00 35.80 2.23
397 398 4.853468 TTGATGGCTCCCACTAAACATA 57.147 40.909 0.00 0.00 35.80 2.29
398 399 3.737559 TTGATGGCTCCCACTAAACAT 57.262 42.857 0.00 0.00 35.80 2.71
399 400 3.181434 ACTTTGATGGCTCCCACTAAACA 60.181 43.478 0.00 0.00 35.80 2.83
400 401 3.421844 ACTTTGATGGCTCCCACTAAAC 58.578 45.455 0.00 0.00 35.80 2.01
401 402 3.686016 GACTTTGATGGCTCCCACTAAA 58.314 45.455 0.00 0.00 35.80 1.85
402 403 2.354704 CGACTTTGATGGCTCCCACTAA 60.355 50.000 0.00 0.00 35.80 2.24
403 404 1.207089 CGACTTTGATGGCTCCCACTA 59.793 52.381 0.00 0.00 35.80 2.74
404 405 0.036010 CGACTTTGATGGCTCCCACT 60.036 55.000 0.00 0.00 35.80 4.00
405 406 0.036388 TCGACTTTGATGGCTCCCAC 60.036 55.000 0.00 0.00 35.80 4.61
406 407 0.036388 GTCGACTTTGATGGCTCCCA 60.036 55.000 8.70 0.00 38.19 4.37
407 408 0.744771 GGTCGACTTTGATGGCTCCC 60.745 60.000 16.46 0.00 0.00 4.30
408 409 0.744771 GGGTCGACTTTGATGGCTCC 60.745 60.000 16.46 0.00 0.00 4.70
409 410 0.036388 TGGGTCGACTTTGATGGCTC 60.036 55.000 16.46 0.00 0.00 4.70
410 411 0.321653 GTGGGTCGACTTTGATGGCT 60.322 55.000 16.46 0.00 0.00 4.75
411 412 1.305930 GGTGGGTCGACTTTGATGGC 61.306 60.000 16.46 0.00 0.00 4.40
412 413 0.036164 TGGTGGGTCGACTTTGATGG 59.964 55.000 16.46 0.00 0.00 3.51
413 414 1.890876 TTGGTGGGTCGACTTTGATG 58.109 50.000 16.46 0.00 0.00 3.07
414 415 2.649531 TTTGGTGGGTCGACTTTGAT 57.350 45.000 16.46 0.00 0.00 2.57
415 416 2.226330 CATTTGGTGGGTCGACTTTGA 58.774 47.619 16.46 0.00 0.00 2.69
416 417 1.953686 ACATTTGGTGGGTCGACTTTG 59.046 47.619 16.46 4.61 0.00 2.77
417 418 2.358322 ACATTTGGTGGGTCGACTTT 57.642 45.000 16.46 0.00 0.00 2.66
418 419 1.953686 CAACATTTGGTGGGTCGACTT 59.046 47.619 16.46 0.00 0.00 3.01
419 420 1.133915 ACAACATTTGGTGGGTCGACT 60.134 47.619 16.46 0.00 36.97 4.18
420 421 1.265905 GACAACATTTGGTGGGTCGAC 59.734 52.381 7.13 7.13 36.97 4.20
421 422 1.600023 GACAACATTTGGTGGGTCGA 58.400 50.000 0.01 0.00 36.97 4.20
422 423 0.237235 CGACAACATTTGGTGGGTCG 59.763 55.000 0.01 0.00 45.96 4.79
423 424 1.001815 CACGACAACATTTGGTGGGTC 60.002 52.381 0.01 0.00 36.97 4.46
424 425 1.028905 CACGACAACATTTGGTGGGT 58.971 50.000 0.01 0.00 36.97 4.51
425 426 0.313672 CCACGACAACATTTGGTGGG 59.686 55.000 0.01 0.00 43.39 4.61
426 427 3.863681 CCACGACAACATTTGGTGG 57.136 52.632 0.01 0.00 41.81 4.61
427 428 0.318614 GGCCACGACAACATTTGGTG 60.319 55.000 0.00 0.00 39.04 4.17
428 429 0.467290 AGGCCACGACAACATTTGGT 60.467 50.000 5.01 0.00 34.12 3.67
429 430 0.673437 AAGGCCACGACAACATTTGG 59.327 50.000 5.01 0.00 34.12 3.28
430 431 1.335872 GGAAGGCCACGACAACATTTG 60.336 52.381 5.01 0.00 0.00 2.32
431 432 0.958822 GGAAGGCCACGACAACATTT 59.041 50.000 5.01 0.00 0.00 2.32
432 433 0.110486 AGGAAGGCCACGACAACATT 59.890 50.000 5.01 0.00 36.29 2.71
433 434 0.606401 CAGGAAGGCCACGACAACAT 60.606 55.000 5.01 0.00 36.29 2.71
434 435 1.227823 CAGGAAGGCCACGACAACA 60.228 57.895 5.01 0.00 36.29 3.33
435 436 2.617274 GCAGGAAGGCCACGACAAC 61.617 63.158 5.01 0.00 36.29 3.32
436 437 2.281484 GCAGGAAGGCCACGACAA 60.281 61.111 5.01 0.00 36.29 3.18
444 445 2.595009 CTTACGGGAGGCAGGAAGGC 62.595 65.000 0.00 0.00 44.61 4.35
445 446 0.976073 TCTTACGGGAGGCAGGAAGG 60.976 60.000 0.00 0.00 0.00 3.46
446 447 0.902531 TTCTTACGGGAGGCAGGAAG 59.097 55.000 0.00 0.00 0.00 3.46
447 448 0.611714 GTTCTTACGGGAGGCAGGAA 59.388 55.000 0.00 0.00 0.00 3.36
448 449 0.252103 AGTTCTTACGGGAGGCAGGA 60.252 55.000 0.00 0.00 0.00 3.86
449 450 0.175989 GAGTTCTTACGGGAGGCAGG 59.824 60.000 0.00 0.00 0.00 4.85
450 451 1.135333 GAGAGTTCTTACGGGAGGCAG 59.865 57.143 0.00 0.00 0.00 4.85
451 452 1.183549 GAGAGTTCTTACGGGAGGCA 58.816 55.000 0.00 0.00 0.00 4.75
452 453 1.406180 GAGAGAGTTCTTACGGGAGGC 59.594 57.143 0.00 0.00 32.53 4.70
453 454 1.671845 CGAGAGAGTTCTTACGGGAGG 59.328 57.143 0.00 0.00 32.53 4.30
454 455 2.352342 GACGAGAGAGTTCTTACGGGAG 59.648 54.545 0.00 0.00 32.53 4.30
455 456 2.027377 AGACGAGAGAGTTCTTACGGGA 60.027 50.000 0.00 0.00 32.53 5.14
456 457 2.096174 CAGACGAGAGAGTTCTTACGGG 59.904 54.545 0.00 1.41 32.53 5.28
457 458 2.476519 GCAGACGAGAGAGTTCTTACGG 60.477 54.545 0.00 0.00 32.53 4.02
477 478 2.430244 TTCGTTCGTCGCCAGAGC 60.430 61.111 0.00 0.00 39.67 4.09
488 489 1.481363 AGCCTAGCCCTAAGTTCGTTC 59.519 52.381 0.00 0.00 0.00 3.95
489 490 1.481363 GAGCCTAGCCCTAAGTTCGTT 59.519 52.381 0.00 0.00 0.00 3.85
550 551 0.467384 CGGATCTTGCATGGGAGACT 59.533 55.000 0.00 0.00 0.00 3.24
558 559 1.838112 TGGAAAAGCGGATCTTGCAT 58.162 45.000 12.00 0.00 34.67 3.96
569 570 2.099405 TGGATTCGGGATTGGAAAAGC 58.901 47.619 0.00 0.00 0.00 3.51
593 594 0.471617 ATGAAATCAGGGAGCGGAGG 59.528 55.000 0.00 0.00 0.00 4.30
620 621 3.185299 ATGTCACCCCGAACCGCAA 62.185 57.895 0.00 0.00 0.00 4.85
638 639 0.776810 TCTGTGCTCCCCCAAAATCA 59.223 50.000 0.00 0.00 0.00 2.57
639 640 2.027385 GATCTGTGCTCCCCCAAAATC 58.973 52.381 0.00 0.00 0.00 2.17
640 641 1.683011 CGATCTGTGCTCCCCCAAAAT 60.683 52.381 0.00 0.00 0.00 1.82
641 642 0.322456 CGATCTGTGCTCCCCCAAAA 60.322 55.000 0.00 0.00 0.00 2.44
642 643 1.299648 CGATCTGTGCTCCCCCAAA 59.700 57.895 0.00 0.00 0.00 3.28
643 644 2.669133 CCGATCTGTGCTCCCCCAA 61.669 63.158 0.00 0.00 0.00 4.12
644 645 3.083349 CCGATCTGTGCTCCCCCA 61.083 66.667 0.00 0.00 0.00 4.96
645 646 2.198304 AAACCGATCTGTGCTCCCCC 62.198 60.000 0.00 0.00 0.00 5.40
646 647 0.322546 AAAACCGATCTGTGCTCCCC 60.323 55.000 0.00 0.00 0.00 4.81
647 648 0.804989 CAAAACCGATCTGTGCTCCC 59.195 55.000 0.00 0.00 0.00 4.30
648 649 0.169009 GCAAAACCGATCTGTGCTCC 59.831 55.000 0.00 0.00 32.43 4.70
649 650 0.169009 GGCAAAACCGATCTGTGCTC 59.831 55.000 0.00 0.00 35.53 4.26
650 651 0.537143 TGGCAAAACCGATCTGTGCT 60.537 50.000 0.00 0.00 43.94 4.40
651 652 0.387239 GTGGCAAAACCGATCTGTGC 60.387 55.000 0.00 0.00 43.94 4.57
652 653 0.240945 GGTGGCAAAACCGATCTGTG 59.759 55.000 0.00 0.00 43.94 3.66
653 654 0.893727 GGGTGGCAAAACCGATCTGT 60.894 55.000 0.00 0.00 43.94 3.41
654 655 1.883021 GGGTGGCAAAACCGATCTG 59.117 57.895 0.00 0.00 43.94 2.90
655 656 4.415783 GGGTGGCAAAACCGATCT 57.584 55.556 0.00 0.00 43.94 2.75
686 687 0.958091 CCCAAAATCAAGCACCGACA 59.042 50.000 0.00 0.00 0.00 4.35
707 708 0.179034 GGATCCCACCATCTGTGCTC 60.179 60.000 0.00 0.00 44.01 4.26
727 728 2.892425 CTCCATGTCGCCGCTTCC 60.892 66.667 0.00 0.00 0.00 3.46
737 738 1.304713 CCCTTTGCAGCCTCCATGT 60.305 57.895 0.00 0.00 0.00 3.21
821 822 2.072487 ACAGCCGCCCCATCTACAT 61.072 57.895 0.00 0.00 0.00 2.29
823 824 2.203070 CACAGCCGCCCCATCTAC 60.203 66.667 0.00 0.00 0.00 2.59
895 896 1.112113 TCTTCCAGTATGACCGCCTC 58.888 55.000 0.00 0.00 39.69 4.70
897 898 1.412710 TCATCTTCCAGTATGACCGCC 59.587 52.381 0.00 0.00 39.69 6.13
900 901 7.554118 TCTTCATTTTCATCTTCCAGTATGACC 59.446 37.037 0.00 0.00 39.69 4.02
907 908 7.684937 AGTCTTCTTCATTTTCATCTTCCAG 57.315 36.000 0.00 0.00 0.00 3.86
958 959 3.542969 ATTGGGGGATAATACCTTGCC 57.457 47.619 0.00 0.00 0.00 4.52
1058 1059 8.908678 CAAATTCTACAATGAATGTGTTGTCTG 58.091 33.333 0.00 0.00 43.77 3.51
1068 1069 6.855763 TGGGAAGCAAATTCTACAATGAAT 57.144 33.333 0.00 0.00 38.07 2.57
1125 1126 4.202567 ACAACATGTTTCCCTACTGTCCAT 60.203 41.667 8.77 0.00 0.00 3.41
1174 1175 3.616956 TGTCACCTCTGATGGCTTTAG 57.383 47.619 0.00 0.00 0.00 1.85
1235 1236 7.758980 CCCATGTTTTATTCATCAATTCGAACA 59.241 33.333 0.00 0.00 0.00 3.18
1262 1263 2.091885 GGTTTGGCTCCCAGATATTCCA 60.092 50.000 0.00 0.00 33.81 3.53
1283 1284 1.610522 CAACTTTCTCCACCTTGCCTG 59.389 52.381 0.00 0.00 0.00 4.85
1296 1297 5.010012 ACCTTGTTCATCCACATCAACTTTC 59.990 40.000 0.00 0.00 0.00 2.62
1392 1393 3.629398 CCTTGTGTTTCTGTGAGAAAGCT 59.371 43.478 0.00 0.00 44.07 3.74
1428 1429 3.742433 AGCCTTTCATATCTCACCTCG 57.258 47.619 0.00 0.00 0.00 4.63
1471 1472 5.006386 CAGAGAGGAATGGCCAATTATACC 58.994 45.833 10.96 7.32 40.02 2.73
1510 1511 1.790157 TCCCTCCTTATCTCTCTCCCC 59.210 57.143 0.00 0.00 0.00 4.81
1512 1513 3.323691 GCTTTCCCTCCTTATCTCTCTCC 59.676 52.174 0.00 0.00 0.00 3.71
1525 1526 3.565902 GCATTGTATGGTAGCTTTCCCTC 59.434 47.826 0.00 0.00 0.00 4.30
1537 1538 9.638239 AAAACACAGTTTATTAGCATTGTATGG 57.362 29.630 0.00 0.00 0.00 2.74
1553 1554 8.581578 TCTTTTTGTCCTCTTTAAAACACAGTT 58.418 29.630 0.00 0.00 0.00 3.16
1554 1555 8.117813 TCTTTTTGTCCTCTTTAAAACACAGT 57.882 30.769 0.00 0.00 0.00 3.55
1555 1556 8.980143 TTCTTTTTGTCCTCTTTAAAACACAG 57.020 30.769 0.00 0.00 0.00 3.66
1572 1573 7.592938 TGTACATTGAGGCATACTTCTTTTTG 58.407 34.615 0.00 0.00 0.00 2.44
1595 1596 5.281314 ACTGGGAACTAGGTTCAGATATGT 58.719 41.667 15.99 0.00 43.54 2.29
1598 1599 4.942944 TGACTGGGAACTAGGTTCAGATA 58.057 43.478 15.99 4.76 43.54 1.98
1604 1605 2.372172 CCACTTGACTGGGAACTAGGTT 59.628 50.000 0.00 0.00 0.00 3.50
1689 1690 5.372373 CCATTCACCTCTATCTTCCTTTCC 58.628 45.833 0.00 0.00 0.00 3.13
1709 1710 1.807814 AACCTTATCGAGAGCCCCAT 58.192 50.000 0.00 0.00 0.00 4.00
1710 1711 2.037144 GTAACCTTATCGAGAGCCCCA 58.963 52.381 0.00 0.00 0.00 4.96
1719 1720 7.042992 TGTTTCATTAGCGATGTAACCTTATCG 60.043 37.037 16.73 0.00 42.23 2.92
1723 1724 6.811253 TTGTTTCATTAGCGATGTAACCTT 57.189 33.333 16.73 0.00 42.23 3.50
1736 1737 8.855110 TGTAGATTTGCTCCTTTTGTTTCATTA 58.145 29.630 0.00 0.00 0.00 1.90
1778 1779 0.116143 ACTTGCTCTGTCCTCCTCCT 59.884 55.000 0.00 0.00 0.00 3.69
1822 1823 0.883833 CCAGTGATCTTTGCACCACC 59.116 55.000 0.00 0.00 36.95 4.61
1857 1858 5.103000 CCTTTCAGTCTATACACCTTCACG 58.897 45.833 0.00 0.00 0.00 4.35
1874 1875 2.032528 CCTGCGTCTGCCCTTTCA 59.967 61.111 0.00 0.00 41.78 2.69
1943 1944 0.037590 ATTGTTTGCGTCCTGCCCTA 59.962 50.000 0.00 0.00 45.60 3.53
1958 1959 2.263895 TGGAGTAGGGTAGGCATTGT 57.736 50.000 0.00 0.00 0.00 2.71
2050 2052 1.688735 CCTGATCCGCTGATCCTGTTA 59.311 52.381 14.66 0.00 45.74 2.41
2107 2112 2.002586 CGACAGTTCCAACATAGCAGG 58.997 52.381 0.00 0.00 0.00 4.85
2116 2121 2.110213 AAGCCGCGACAGTTCCAA 59.890 55.556 8.23 0.00 0.00 3.53
2229 2234 1.899814 ACCACATGAAGTTCCGAGCTA 59.100 47.619 0.00 0.00 0.00 3.32
2367 2376 6.458888 GCCCTCTTCTAGTTTAACAATGATGC 60.459 42.308 0.00 0.00 0.00 3.91
2381 2390 4.102210 TCTCCATTCAATGCCCTCTTCTAG 59.898 45.833 0.00 0.00 0.00 2.43
2406 2415 4.290942 TGGTTCCCCATACACAAAAGTTT 58.709 39.130 0.00 0.00 35.17 2.66
2624 2633 5.418840 ACCATGTGAATTTAGGACCAATGTC 59.581 40.000 0.00 0.00 40.98 3.06
2655 2664 5.250200 TGATATTACGTTTGCCCTCTTGTT 58.750 37.500 0.00 0.00 0.00 2.83
2665 2674 6.017934 CCAATCTGACCCTGATATTACGTTTG 60.018 42.308 0.00 0.00 0.00 2.93
2731 2740 1.150827 TGTTCTCTGCTGTGCAATCG 58.849 50.000 0.00 0.00 38.41 3.34
2742 2751 3.005554 GTGGTGGTGATGATGTTCTCTG 58.994 50.000 0.00 0.00 0.00 3.35
2785 2794 5.105063 TCATCTCTTCTTGCTATTGTCACG 58.895 41.667 0.00 0.00 0.00 4.35
2797 2806 5.310409 TGTGGACCTTTTCATCTCTTCTT 57.690 39.130 0.00 0.00 0.00 2.52
2817 2826 3.573967 GGACTGTTGGATTGGTTCATTGT 59.426 43.478 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.