Multiple sequence alignment - TraesCS7A01G060800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G060800 chr7A 100.000 2657 0 0 1 2657 30038063 30035407 0.000000e+00 4907.0
1 TraesCS7A01G060800 chr7A 96.970 33 0 1 2236 2268 67668488 67668457 1.000000e-03 54.7
2 TraesCS7A01G060800 chr7D 85.732 1577 90 39 566 2124 29809086 29807627 0.000000e+00 1541.0
3 TraesCS7A01G060800 chr7D 82.031 128 20 3 2128 2254 16787720 16787595 3.620000e-19 106.0
4 TraesCS7A01G060800 chr7D 81.513 119 19 3 2132 2249 538817571 538817455 7.830000e-16 95.3
5 TraesCS7A01G060800 chr4A 88.654 1181 58 32 599 1757 699934146 699935272 0.000000e+00 1369.0
6 TraesCS7A01G060800 chr4A 81.694 366 19 13 1781 2128 699935263 699935598 7.300000e-66 261.0
7 TraesCS7A01G060800 chr4A 82.734 278 26 11 290 566 694696389 694696133 7.400000e-56 228.0
8 TraesCS7A01G060800 chr4A 83.553 152 21 3 1 148 694696826 694696675 3.570000e-29 139.0
9 TraesCS7A01G060800 chr4B 91.033 368 23 6 202 567 370917801 370917442 3.070000e-134 488.0
10 TraesCS7A01G060800 chr4B 89.844 384 25 8 1 378 25052622 25052997 5.140000e-132 481.0
11 TraesCS7A01G060800 chr4B 95.213 188 9 0 380 567 25053130 25053317 5.560000e-77 298.0
12 TraesCS7A01G060800 chr4B 95.122 41 1 1 522 562 176938685 176938646 2.210000e-06 63.9
13 TraesCS7A01G060800 chr4B 91.111 45 3 1 2119 2162 41557448 41557492 2.860000e-05 60.2
14 TraesCS7A01G060800 chr1D 91.354 347 16 8 1 342 206800952 206801289 1.860000e-126 462.0
15 TraesCS7A01G060800 chr1D 94.215 242 14 0 326 567 206823029 206823270 1.160000e-98 370.0
16 TraesCS7A01G060800 chr1D 100.000 32 0 0 2230 2261 412659950 412659981 2.860000e-05 60.2
17 TraesCS7A01G060800 chr6B 84.615 117 14 4 2132 2246 632779220 632779334 2.160000e-21 113.0
18 TraesCS7A01G060800 chr6D 82.787 122 14 7 2121 2237 419739421 419739540 4.680000e-18 102.0
19 TraesCS7A01G060800 chr5B 80.645 124 22 2 2137 2260 358891128 358891007 7.830000e-16 95.3
20 TraesCS7A01G060800 chr1B 82.051 117 15 6 2132 2245 684909758 684909645 7.830000e-16 95.3
21 TraesCS7A01G060800 chr7B 84.783 92 12 2 479 568 479046147 479046056 1.010000e-14 91.6
22 TraesCS7A01G060800 chr1A 83.529 85 11 3 1 85 316952510 316952429 2.840000e-10 76.8
23 TraesCS7A01G060800 chr3A 78.151 119 24 2 2132 2249 708105231 708105114 1.020000e-09 75.0
24 TraesCS7A01G060800 chr6A 85.507 69 10 0 499 567 677988 677920 3.670000e-09 73.1
25 TraesCS7A01G060800 chr5D 89.796 49 4 1 2212 2260 516884445 516884492 7.940000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G060800 chr7A 30035407 30038063 2656 True 4907.0 4907 100.0000 1 2657 1 chr7A.!!$R1 2656
1 TraesCS7A01G060800 chr7D 29807627 29809086 1459 True 1541.0 1541 85.7320 566 2124 1 chr7D.!!$R2 1558
2 TraesCS7A01G060800 chr4A 699934146 699935598 1452 False 815.0 1369 85.1740 599 2128 2 chr4A.!!$F1 1529
3 TraesCS7A01G060800 chr4B 25052622 25053317 695 False 389.5 481 92.5285 1 567 2 chr4B.!!$F2 566

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 371 0.034059 ACGGAAGTGGAAGAGCACTG 59.966 55.0 0.0 0.0 46.97 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2012 2202 0.033894 ATGCATGCCCTCACACATGA 60.034 50.0 16.68 0.0 45.23 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.670934 CGGCTTGCTCCAGTGCTT 60.671 61.111 0.00 0.00 0.00 3.91
35 36 3.312828 CTCCAGTGCTTATAGTCATCGC 58.687 50.000 0.00 0.00 0.00 4.58
42 43 4.023107 GTGCTTATAGTCATCGCTAGGTGA 60.023 45.833 0.00 0.00 0.00 4.02
62 63 7.402054 AGGTGATACATGAATCTGGTTGTAAA 58.598 34.615 0.00 0.00 0.00 2.01
170 173 3.118956 ACAATGTTTTTCTTTGCCGGTGA 60.119 39.130 1.90 0.00 35.47 4.02
171 174 3.810310 ATGTTTTTCTTTGCCGGTGAA 57.190 38.095 1.90 0.00 0.00 3.18
172 175 2.882324 TGTTTTTCTTTGCCGGTGAAC 58.118 42.857 1.90 0.00 0.00 3.18
173 176 2.231478 TGTTTTTCTTTGCCGGTGAACA 59.769 40.909 1.90 0.47 0.00 3.18
176 179 2.570442 TTCTTTGCCGGTGAACAAAC 57.430 45.000 1.90 0.00 32.60 2.93
189 192 5.220191 CGGTGAACAAACAAACAATGTCAAG 60.220 40.000 0.00 0.00 42.99 3.02
199 202 7.581011 ACAAACAATGTCAAGAAACAAGTTC 57.419 32.000 0.00 0.00 37.96 3.01
204 207 6.589907 ACAATGTCAAGAAACAAGTTCCAAAC 59.410 34.615 0.00 0.00 36.86 2.93
254 261 3.758755 AGATCTGAAGACAGTGTGCAA 57.241 42.857 0.00 0.00 43.81 4.08
285 292 2.134201 AAAGGCAAAAACGCACTAGC 57.866 45.000 0.00 0.00 37.42 3.42
308 315 1.902508 TGCCCTCAGACTAAGGAACAG 59.097 52.381 0.00 0.00 35.83 3.16
331 338 1.336795 GCCCACAAATGTACAAGCACC 60.337 52.381 0.00 0.00 0.00 5.01
333 340 2.030007 CCCACAAATGTACAAGCACCAG 60.030 50.000 0.00 0.00 0.00 4.00
364 371 0.034059 ACGGAAGTGGAAGAGCACTG 59.966 55.000 0.00 0.00 46.97 3.66
387 525 1.007387 GCACCCGCAGAAAAACAGG 60.007 57.895 0.00 0.00 38.36 4.00
412 550 2.224066 ACACGTTCCACTCAGAGAAAGG 60.224 50.000 3.79 3.27 0.00 3.11
424 562 3.315191 TCAGAGAAAGGAAAAACAAGCCG 59.685 43.478 0.00 0.00 0.00 5.52
444 582 1.693083 GCACGAACGGGTAGCACATC 61.693 60.000 0.00 0.00 0.00 3.06
507 645 8.195436 ACAAATCTCAGCAAATTGATCTAATGG 58.805 33.333 0.00 0.00 0.00 3.16
522 660 5.282055 TCTAATGGCTGTGGACTTAGATG 57.718 43.478 0.00 0.00 0.00 2.90
526 664 2.840038 TGGCTGTGGACTTAGATGTGAT 59.160 45.455 0.00 0.00 0.00 3.06
574 712 9.744468 GTGATTTAGCCAATCCGTTAAATATTT 57.256 29.630 5.89 5.89 40.80 1.40
575 713 9.743057 TGATTTAGCCAATCCGTTAAATATTTG 57.257 29.630 11.05 0.00 40.80 2.32
577 715 9.965824 ATTTAGCCAATCCGTTAAATATTTGAG 57.034 29.630 11.05 2.25 0.00 3.02
580 718 6.601613 AGCCAATCCGTTAAATATTTGAGACA 59.398 34.615 11.05 0.00 0.00 3.41
626 765 2.692557 CTGATCTGGACTCGACCATCTT 59.307 50.000 0.00 0.00 39.34 2.40
627 766 2.690497 TGATCTGGACTCGACCATCTTC 59.310 50.000 0.00 0.00 39.34 2.87
689 828 2.099756 TCTGTGTCTGTCTGTGTGAGTG 59.900 50.000 0.00 0.00 0.00 3.51
690 829 2.099405 TGTGTCTGTCTGTGTGAGTGA 58.901 47.619 0.00 0.00 0.00 3.41
691 830 2.099756 TGTGTCTGTCTGTGTGAGTGAG 59.900 50.000 0.00 0.00 0.00 3.51
692 831 2.099921 GTGTCTGTCTGTGTGAGTGAGT 59.900 50.000 0.00 0.00 0.00 3.41
693 832 2.099756 TGTCTGTCTGTGTGAGTGAGTG 59.900 50.000 0.00 0.00 0.00 3.51
730 870 2.614057 ACGTCTGTCTGAAAGCAAAAGG 59.386 45.455 0.00 0.00 0.00 3.11
731 871 2.603173 CGTCTGTCTGAAAGCAAAAGGC 60.603 50.000 0.00 0.00 45.30 4.35
744 884 2.034685 GCAAAAGGCTTCGTCTTTCCTT 59.965 45.455 0.00 0.00 36.39 3.36
748 888 1.276705 AGGCTTCGTCTTTCCTTCCTC 59.723 52.381 0.00 0.00 0.00 3.71
768 908 2.358247 TTCGCGCCAACCTTCTCC 60.358 61.111 0.00 0.00 0.00 3.71
795 935 2.816958 CGCGCTCCATGCAGAAGT 60.817 61.111 5.56 0.00 43.06 3.01
807 947 3.547567 CAGAAGTTGCCTCCTCCTG 57.452 57.895 0.00 0.00 0.00 3.86
808 948 0.035630 CAGAAGTTGCCTCCTCCTGG 60.036 60.000 0.00 0.00 0.00 4.45
994 1166 1.161563 GCTAGGTAGAGAGAGCGCGT 61.162 60.000 8.43 0.00 0.00 6.01
1146 1324 3.885521 CCCTACGTCGCCGTCTCC 61.886 72.222 0.00 0.00 46.28 3.71
1158 1336 1.525077 CGTCTCCTCCTCCTCCTCG 60.525 68.421 0.00 0.00 0.00 4.63
1164 1342 1.525077 CTCCTCCTCCTCGTCCTCG 60.525 68.421 0.00 0.00 38.55 4.63
1665 1843 2.352343 TCGCGCTGATCGACGATG 60.352 61.111 16.49 2.70 40.02 3.84
1666 1844 2.352343 CGCGCTGATCGACGATGA 60.352 61.111 16.49 5.85 41.67 2.92
1667 1845 2.630714 CGCGCTGATCGACGATGAC 61.631 63.158 16.49 2.04 41.67 3.06
1668 1846 2.296480 GCGCTGATCGACGATGACC 61.296 63.158 16.49 1.25 41.67 4.02
1669 1847 1.658717 CGCTGATCGACGATGACCC 60.659 63.158 16.49 0.85 41.67 4.46
1670 1848 1.658717 GCTGATCGACGATGACCCG 60.659 63.158 16.49 0.00 0.00 5.28
1671 1849 2.022520 CTGATCGACGATGACCCGA 58.977 57.895 16.49 0.00 36.72 5.14
1749 1931 0.373716 GTTTGACTAATCGCTGCCCG 59.626 55.000 0.00 0.00 38.61 6.13
1750 1932 0.742990 TTTGACTAATCGCTGCCCGG 60.743 55.000 0.00 0.00 37.59 5.73
1751 1933 1.609635 TTGACTAATCGCTGCCCGGA 61.610 55.000 0.73 0.00 37.59 5.14
1752 1934 1.300233 GACTAATCGCTGCCCGGAG 60.300 63.158 0.73 0.00 37.59 4.63
1753 1935 2.663188 CTAATCGCTGCCCGGAGC 60.663 66.667 0.73 3.41 44.14 4.70
1762 1944 3.814268 GCCCGGAGCACGTACGTA 61.814 66.667 22.34 0.00 42.97 3.57
1763 1945 2.100991 CCCGGAGCACGTACGTAC 59.899 66.667 22.34 16.33 42.24 3.67
1890 2072 2.100797 TCCGATTGGACGTACGCG 59.899 61.111 16.72 3.53 40.17 6.01
1891 2073 3.613702 CCGATTGGACGTACGCGC 61.614 66.667 16.72 7.74 42.83 6.86
1892 2074 2.578713 CGATTGGACGTACGCGCT 60.579 61.111 16.72 0.00 42.83 5.92
1893 2075 2.845739 CGATTGGACGTACGCGCTG 61.846 63.158 16.72 1.02 42.83 5.18
1894 2076 3.139118 GATTGGACGTACGCGCTGC 62.139 63.158 16.72 1.57 42.83 5.25
1997 2187 2.617840 TCGTCTAGGGAAGGTTCCTT 57.382 50.000 8.65 3.55 46.72 3.36
1998 2188 2.454538 TCGTCTAGGGAAGGTTCCTTC 58.545 52.381 19.80 19.80 46.72 3.46
2010 2200 3.379452 AGGTTCCTTCCTAGTGATGGAG 58.621 50.000 12.49 0.00 45.26 3.86
2011 2201 2.436173 GGTTCCTTCCTAGTGATGGAGG 59.564 54.545 12.49 1.68 45.26 4.30
2012 2202 3.108376 GTTCCTTCCTAGTGATGGAGGT 58.892 50.000 12.49 0.00 45.26 3.85
2013 2203 3.033659 TCCTTCCTAGTGATGGAGGTC 57.966 52.381 10.10 0.00 41.18 3.85
2014 2204 2.314852 TCCTTCCTAGTGATGGAGGTCA 59.685 50.000 10.10 0.00 41.18 4.02
2015 2205 3.051803 TCCTTCCTAGTGATGGAGGTCAT 60.052 47.826 10.10 0.00 41.18 3.06
2016 2206 3.070734 CCTTCCTAGTGATGGAGGTCATG 59.929 52.174 7.12 0.00 40.03 3.07
2017 2207 3.404869 TCCTAGTGATGGAGGTCATGT 57.595 47.619 0.00 0.00 35.97 3.21
2018 2208 3.033909 TCCTAGTGATGGAGGTCATGTG 58.966 50.000 0.00 0.00 35.97 3.21
2019 2209 2.768527 CCTAGTGATGGAGGTCATGTGT 59.231 50.000 0.00 0.00 35.97 3.72
2020 2210 2.775911 AGTGATGGAGGTCATGTGTG 57.224 50.000 0.00 0.00 35.97 3.82
2021 2211 2.259917 AGTGATGGAGGTCATGTGTGA 58.740 47.619 0.00 0.00 35.97 3.58
2022 2212 2.235650 AGTGATGGAGGTCATGTGTGAG 59.764 50.000 0.00 0.00 35.97 3.51
2023 2213 1.556451 TGATGGAGGTCATGTGTGAGG 59.444 52.381 0.00 0.00 35.97 3.86
2024 2214 0.914644 ATGGAGGTCATGTGTGAGGG 59.085 55.000 0.00 0.00 34.36 4.30
2025 2215 1.078143 GGAGGTCATGTGTGAGGGC 60.078 63.158 0.00 0.00 34.36 5.19
2026 2216 1.679311 GAGGTCATGTGTGAGGGCA 59.321 57.895 0.00 0.00 34.36 5.36
2041 2249 2.038164 GAGGGCATGCATATCTCTGTCA 59.962 50.000 21.36 0.00 0.00 3.58
2064 2272 9.394477 GTCATCCAAAGTGTAAATTCAGTAAAC 57.606 33.333 0.00 0.00 0.00 2.01
2103 2316 6.124088 AGTGAAGTTTTCAGTGCAAACTAG 57.876 37.500 19.15 0.00 42.47 2.57
2118 2336 4.681483 GCAAACTAGACAACTTTGAATGCC 59.319 41.667 0.00 0.00 0.00 4.40
2128 2346 8.776470 AGACAACTTTGAATGCCATTTTATTTG 58.224 29.630 0.00 0.00 0.00 2.32
2129 2347 7.873910 ACAACTTTGAATGCCATTTTATTTGG 58.126 30.769 0.00 0.00 37.31 3.28
2130 2348 7.718753 ACAACTTTGAATGCCATTTTATTTGGA 59.281 29.630 0.00 0.00 36.26 3.53
2131 2349 8.732531 CAACTTTGAATGCCATTTTATTTGGAT 58.267 29.630 0.00 0.00 36.26 3.41
2132 2350 8.271312 ACTTTGAATGCCATTTTATTTGGATG 57.729 30.769 0.00 0.00 36.26 3.51
2133 2351 7.884354 ACTTTGAATGCCATTTTATTTGGATGT 59.116 29.630 0.00 0.00 36.26 3.06
2134 2352 7.612668 TTGAATGCCATTTTATTTGGATGTG 57.387 32.000 0.00 0.00 36.26 3.21
2135 2353 6.114089 TGAATGCCATTTTATTTGGATGTGG 58.886 36.000 0.00 0.00 36.26 4.17
2137 2355 4.141233 GCCATTTTATTTGGATGTGGCT 57.859 40.909 6.25 0.00 45.33 4.75
2138 2356 5.275067 GCCATTTTATTTGGATGTGGCTA 57.725 39.130 6.25 0.00 45.33 3.93
2139 2357 5.291971 GCCATTTTATTTGGATGTGGCTAG 58.708 41.667 6.25 0.00 45.33 3.42
2140 2358 5.739935 GCCATTTTATTTGGATGTGGCTAGG 60.740 44.000 6.25 0.00 45.33 3.02
2141 2359 5.363580 CCATTTTATTTGGATGTGGCTAGGT 59.636 40.000 0.00 0.00 36.26 3.08
2142 2360 6.461509 CCATTTTATTTGGATGTGGCTAGGTC 60.462 42.308 0.00 0.00 36.26 3.85
2143 2361 5.450818 TTTATTTGGATGTGGCTAGGTCT 57.549 39.130 0.00 0.00 0.00 3.85
2144 2362 3.567478 ATTTGGATGTGGCTAGGTCTC 57.433 47.619 0.00 0.00 0.00 3.36
2145 2363 1.951209 TTGGATGTGGCTAGGTCTCA 58.049 50.000 0.00 0.00 0.00 3.27
2146 2364 1.489481 TGGATGTGGCTAGGTCTCAG 58.511 55.000 0.00 0.00 0.00 3.35
2147 2365 1.273267 TGGATGTGGCTAGGTCTCAGT 60.273 52.381 0.00 0.00 0.00 3.41
2148 2366 1.410882 GGATGTGGCTAGGTCTCAGTC 59.589 57.143 0.00 0.00 0.00 3.51
2149 2367 2.103373 GATGTGGCTAGGTCTCAGTCA 58.897 52.381 0.00 0.00 0.00 3.41
2150 2368 2.009681 TGTGGCTAGGTCTCAGTCAA 57.990 50.000 0.00 0.00 27.45 3.18
2151 2369 1.895798 TGTGGCTAGGTCTCAGTCAAG 59.104 52.381 0.00 0.00 27.45 3.02
2152 2370 1.896465 GTGGCTAGGTCTCAGTCAAGT 59.104 52.381 0.00 0.00 27.45 3.16
2153 2371 1.895798 TGGCTAGGTCTCAGTCAAGTG 59.104 52.381 0.00 0.00 0.00 3.16
2154 2372 2.171840 GGCTAGGTCTCAGTCAAGTGA 58.828 52.381 0.00 0.00 0.00 3.41
2155 2373 2.763448 GGCTAGGTCTCAGTCAAGTGAT 59.237 50.000 0.00 0.00 0.00 3.06
2156 2374 3.954904 GGCTAGGTCTCAGTCAAGTGATA 59.045 47.826 0.00 0.00 0.00 2.15
2157 2375 4.586841 GGCTAGGTCTCAGTCAAGTGATAT 59.413 45.833 0.00 0.00 0.00 1.63
2158 2376 5.770663 GGCTAGGTCTCAGTCAAGTGATATA 59.229 44.000 0.00 0.00 0.00 0.86
2159 2377 6.072175 GGCTAGGTCTCAGTCAAGTGATATAG 60.072 46.154 0.00 0.00 0.00 1.31
2160 2378 6.488683 GCTAGGTCTCAGTCAAGTGATATAGT 59.511 42.308 0.00 0.00 0.00 2.12
2161 2379 7.662258 GCTAGGTCTCAGTCAAGTGATATAGTA 59.338 40.741 0.00 0.00 0.00 1.82
2162 2380 9.733556 CTAGGTCTCAGTCAAGTGATATAGTAT 57.266 37.037 0.00 0.00 0.00 2.12
2212 2430 9.847224 AAAAAGAATATTGGTACGATACTCCAT 57.153 29.630 0.00 0.00 0.00 3.41
2213 2431 8.833231 AAAGAATATTGGTACGATACTCCATG 57.167 34.615 0.00 0.00 0.00 3.66
2214 2432 6.398918 AGAATATTGGTACGATACTCCATGC 58.601 40.000 0.00 0.00 0.00 4.06
2215 2433 5.738619 ATATTGGTACGATACTCCATGCA 57.261 39.130 0.00 0.00 0.00 3.96
2216 2434 3.897141 TTGGTACGATACTCCATGCAA 57.103 42.857 0.00 0.00 0.00 4.08
2217 2435 3.452755 TGGTACGATACTCCATGCAAG 57.547 47.619 0.00 0.00 0.00 4.01
2218 2436 3.028130 TGGTACGATACTCCATGCAAGA 58.972 45.455 0.00 0.00 0.00 3.02
2219 2437 3.641436 TGGTACGATACTCCATGCAAGAT 59.359 43.478 0.00 0.00 0.00 2.40
2220 2438 4.238514 GGTACGATACTCCATGCAAGATC 58.761 47.826 0.00 0.00 0.00 2.75
2221 2439 4.021894 GGTACGATACTCCATGCAAGATCT 60.022 45.833 0.00 0.00 0.00 2.75
2222 2440 5.183331 GGTACGATACTCCATGCAAGATCTA 59.817 44.000 0.00 0.00 0.00 1.98
2223 2441 5.384063 ACGATACTCCATGCAAGATCTAG 57.616 43.478 0.00 0.00 0.00 2.43
2224 2442 4.219507 ACGATACTCCATGCAAGATCTAGG 59.780 45.833 0.00 0.00 0.00 3.02
2225 2443 4.381398 CGATACTCCATGCAAGATCTAGGG 60.381 50.000 0.00 0.00 0.00 3.53
2226 2444 2.053244 ACTCCATGCAAGATCTAGGGG 58.947 52.381 0.00 0.00 0.00 4.79
2227 2445 2.333069 CTCCATGCAAGATCTAGGGGA 58.667 52.381 0.00 0.00 0.00 4.81
2228 2446 2.038295 CTCCATGCAAGATCTAGGGGAC 59.962 54.545 0.00 0.00 0.00 4.46
2229 2447 1.770658 CCATGCAAGATCTAGGGGACA 59.229 52.381 0.00 0.00 0.00 4.02
2230 2448 2.374504 CCATGCAAGATCTAGGGGACAT 59.625 50.000 0.00 0.00 0.00 3.06
2231 2449 3.584406 CCATGCAAGATCTAGGGGACATA 59.416 47.826 0.00 0.00 0.00 2.29
2232 2450 4.323333 CCATGCAAGATCTAGGGGACATAG 60.323 50.000 0.00 0.00 0.00 2.23
2233 2451 2.634940 TGCAAGATCTAGGGGACATAGC 59.365 50.000 0.00 0.00 0.00 2.97
2234 2452 2.634940 GCAAGATCTAGGGGACATAGCA 59.365 50.000 0.00 0.00 0.00 3.49
2235 2453 3.262915 GCAAGATCTAGGGGACATAGCAT 59.737 47.826 0.00 0.00 0.00 3.79
2236 2454 4.622695 GCAAGATCTAGGGGACATAGCATC 60.623 50.000 0.00 0.00 0.00 3.91
2237 2455 3.360867 AGATCTAGGGGACATAGCATCG 58.639 50.000 0.00 0.00 0.00 3.84
2238 2456 2.971901 TCTAGGGGACATAGCATCGA 57.028 50.000 0.00 0.00 0.00 3.59
2239 2457 2.515854 TCTAGGGGACATAGCATCGAC 58.484 52.381 0.00 0.00 0.00 4.20
2240 2458 2.108425 TCTAGGGGACATAGCATCGACT 59.892 50.000 0.00 0.00 0.00 4.18
2241 2459 1.043816 AGGGGACATAGCATCGACTG 58.956 55.000 0.00 0.00 0.00 3.51
2242 2460 1.040646 GGGGACATAGCATCGACTGA 58.959 55.000 0.00 0.00 0.00 3.41
2243 2461 1.000283 GGGGACATAGCATCGACTGAG 60.000 57.143 0.00 0.00 0.00 3.35
2244 2462 1.957177 GGGACATAGCATCGACTGAGA 59.043 52.381 0.00 0.00 0.00 3.27
2245 2463 2.287909 GGGACATAGCATCGACTGAGAC 60.288 54.545 0.00 0.00 0.00 3.36
2246 2464 2.621055 GGACATAGCATCGACTGAGACT 59.379 50.000 0.00 0.00 0.00 3.24
2247 2465 3.067461 GGACATAGCATCGACTGAGACTT 59.933 47.826 0.00 0.00 0.00 3.01
2248 2466 4.276183 GGACATAGCATCGACTGAGACTTA 59.724 45.833 0.00 0.00 0.00 2.24
2249 2467 5.431420 ACATAGCATCGACTGAGACTTAG 57.569 43.478 0.00 0.00 0.00 2.18
2250 2468 2.861462 AGCATCGACTGAGACTTAGC 57.139 50.000 0.00 0.00 0.00 3.09
2251 2469 2.095461 AGCATCGACTGAGACTTAGCA 58.905 47.619 0.00 0.00 0.00 3.49
2252 2470 2.493675 AGCATCGACTGAGACTTAGCAA 59.506 45.455 0.00 0.00 0.00 3.91
2253 2471 3.056536 AGCATCGACTGAGACTTAGCAAA 60.057 43.478 0.00 0.00 0.00 3.68
2254 2472 3.679980 GCATCGACTGAGACTTAGCAAAA 59.320 43.478 0.00 0.00 0.00 2.44
2255 2473 4.434857 GCATCGACTGAGACTTAGCAAAAC 60.435 45.833 0.00 0.00 0.00 2.43
2256 2474 4.585955 TCGACTGAGACTTAGCAAAACT 57.414 40.909 0.00 0.00 0.00 2.66
2257 2475 4.299155 TCGACTGAGACTTAGCAAAACTG 58.701 43.478 0.00 0.00 0.00 3.16
2258 2476 4.037565 TCGACTGAGACTTAGCAAAACTGA 59.962 41.667 0.00 0.00 0.00 3.41
2259 2477 4.926238 CGACTGAGACTTAGCAAAACTGAT 59.074 41.667 0.00 0.00 0.00 2.90
2260 2478 5.406780 CGACTGAGACTTAGCAAAACTGATT 59.593 40.000 0.00 0.00 0.00 2.57
2261 2479 6.073548 CGACTGAGACTTAGCAAAACTGATTT 60.074 38.462 0.00 0.00 0.00 2.17
2262 2480 7.519008 CGACTGAGACTTAGCAAAACTGATTTT 60.519 37.037 0.00 0.00 38.61 1.82
2263 2481 8.677148 ACTGAGACTTAGCAAAACTGATTTTA 57.323 30.769 0.00 0.00 35.79 1.52
2264 2482 9.289782 ACTGAGACTTAGCAAAACTGATTTTAT 57.710 29.630 0.00 0.00 35.79 1.40
2297 2515 8.826765 AGATTTTAGTTGATCTCCTTTAGTCCA 58.173 33.333 0.00 0.00 0.00 4.02
2298 2516 9.620259 GATTTTAGTTGATCTCCTTTAGTCCAT 57.380 33.333 0.00 0.00 0.00 3.41
2301 2519 9.488762 TTTAGTTGATCTCCTTTAGTCCATAGA 57.511 33.333 0.00 0.00 0.00 1.98
2302 2520 9.661954 TTAGTTGATCTCCTTTAGTCCATAGAT 57.338 33.333 0.00 0.00 0.00 1.98
2304 2522 9.836179 AGTTGATCTCCTTTAGTCCATAGATAT 57.164 33.333 0.00 0.00 0.00 1.63
2305 2523 9.868277 GTTGATCTCCTTTAGTCCATAGATATG 57.132 37.037 0.00 0.00 0.00 1.78
2306 2524 9.828691 TTGATCTCCTTTAGTCCATAGATATGA 57.171 33.333 1.32 0.00 35.75 2.15
2307 2525 9.473007 TGATCTCCTTTAGTCCATAGATATGAG 57.527 37.037 1.32 0.00 35.75 2.90
2308 2526 8.837099 ATCTCCTTTAGTCCATAGATATGAGG 57.163 38.462 1.32 0.08 35.75 3.86
2309 2527 7.770662 TCTCCTTTAGTCCATAGATATGAGGT 58.229 38.462 1.32 0.00 35.75 3.85
2310 2528 7.891183 TCTCCTTTAGTCCATAGATATGAGGTC 59.109 40.741 1.32 0.00 35.75 3.85
2311 2529 7.535738 TCCTTTAGTCCATAGATATGAGGTCA 58.464 38.462 1.32 0.00 35.75 4.02
2312 2530 7.451877 TCCTTTAGTCCATAGATATGAGGTCAC 59.548 40.741 1.32 0.00 35.75 3.67
2313 2531 7.233553 CCTTTAGTCCATAGATATGAGGTCACA 59.766 40.741 1.32 0.00 35.75 3.58
2314 2532 8.547481 TTTAGTCCATAGATATGAGGTCACAA 57.453 34.615 1.32 0.00 35.75 3.33
2315 2533 6.412362 AGTCCATAGATATGAGGTCACAAC 57.588 41.667 1.32 0.00 35.75 3.32
2316 2534 5.305644 AGTCCATAGATATGAGGTCACAACC 59.694 44.000 1.32 0.00 46.87 3.77
2325 2543 4.922026 GTCACAACCACCGGCGGT 62.922 66.667 28.83 28.83 42.71 5.68
2334 2552 3.152400 ACCGGCGGTGGATCTACC 61.152 66.667 33.71 17.97 32.98 3.18
2340 2558 4.701286 GGTGGATCTACCGTCCCT 57.299 61.111 13.02 0.00 42.61 4.20
2341 2559 2.427742 GGTGGATCTACCGTCCCTC 58.572 63.158 13.02 0.00 42.61 4.30
2342 2560 0.106116 GGTGGATCTACCGTCCCTCT 60.106 60.000 13.02 0.00 42.61 3.69
2343 2561 1.688627 GGTGGATCTACCGTCCCTCTT 60.689 57.143 13.02 0.00 42.61 2.85
2344 2562 2.108970 GTGGATCTACCGTCCCTCTTT 58.891 52.381 0.00 0.00 42.61 2.52
2345 2563 2.500504 GTGGATCTACCGTCCCTCTTTT 59.499 50.000 0.00 0.00 42.61 2.27
2346 2564 3.055312 GTGGATCTACCGTCCCTCTTTTT 60.055 47.826 0.00 0.00 42.61 1.94
2365 2583 5.549742 TTTTTGGGCATTTGATCTGTCTT 57.450 34.783 0.00 0.00 0.00 3.01
2366 2584 4.789012 TTTGGGCATTTGATCTGTCTTC 57.211 40.909 0.00 0.00 0.00 2.87
2367 2585 2.726821 TGGGCATTTGATCTGTCTTCC 58.273 47.619 0.00 0.00 0.00 3.46
2368 2586 2.027385 GGGCATTTGATCTGTCTTCCC 58.973 52.381 0.00 0.00 0.00 3.97
2369 2587 1.672881 GGCATTTGATCTGTCTTCCCG 59.327 52.381 0.00 0.00 0.00 5.14
2370 2588 1.672881 GCATTTGATCTGTCTTCCCGG 59.327 52.381 0.00 0.00 0.00 5.73
2371 2589 1.672881 CATTTGATCTGTCTTCCCGGC 59.327 52.381 0.00 0.00 0.00 6.13
2372 2590 0.984230 TTTGATCTGTCTTCCCGGCT 59.016 50.000 0.00 0.00 0.00 5.52
2373 2591 1.860641 TTGATCTGTCTTCCCGGCTA 58.139 50.000 0.00 0.00 0.00 3.93
2374 2592 2.088104 TGATCTGTCTTCCCGGCTAT 57.912 50.000 0.00 0.00 0.00 2.97
2375 2593 3.238788 TGATCTGTCTTCCCGGCTATA 57.761 47.619 0.00 0.00 0.00 1.31
2376 2594 3.572642 TGATCTGTCTTCCCGGCTATAA 58.427 45.455 0.00 0.00 0.00 0.98
2377 2595 3.964688 TGATCTGTCTTCCCGGCTATAAA 59.035 43.478 0.00 0.00 0.00 1.40
2378 2596 3.814005 TCTGTCTTCCCGGCTATAAAC 57.186 47.619 0.00 0.00 0.00 2.01
2379 2597 2.433239 TCTGTCTTCCCGGCTATAAACC 59.567 50.000 0.00 0.00 0.00 3.27
2380 2598 2.434702 CTGTCTTCCCGGCTATAAACCT 59.565 50.000 0.00 0.00 0.00 3.50
2381 2599 2.841881 TGTCTTCCCGGCTATAAACCTT 59.158 45.455 0.00 0.00 0.00 3.50
2382 2600 4.032310 TGTCTTCCCGGCTATAAACCTTA 58.968 43.478 0.00 0.00 0.00 2.69
2383 2601 4.141869 TGTCTTCCCGGCTATAAACCTTAC 60.142 45.833 0.00 0.00 0.00 2.34
2384 2602 4.032310 TCTTCCCGGCTATAAACCTTACA 58.968 43.478 0.00 0.00 0.00 2.41
2385 2603 3.825143 TCCCGGCTATAAACCTTACAC 57.175 47.619 0.00 0.00 0.00 2.90
2386 2604 2.101249 TCCCGGCTATAAACCTTACACG 59.899 50.000 0.00 0.00 0.00 4.49
2387 2605 1.862827 CCGGCTATAAACCTTACACGC 59.137 52.381 0.00 0.00 0.00 5.34
2388 2606 2.482490 CCGGCTATAAACCTTACACGCT 60.482 50.000 0.00 0.00 0.00 5.07
2389 2607 3.192466 CGGCTATAAACCTTACACGCTT 58.808 45.455 0.00 0.00 0.00 4.68
2390 2608 3.619929 CGGCTATAAACCTTACACGCTTT 59.380 43.478 0.00 0.00 0.00 3.51
2391 2609 4.093850 CGGCTATAAACCTTACACGCTTTT 59.906 41.667 0.00 0.00 0.00 2.27
2392 2610 5.291614 CGGCTATAAACCTTACACGCTTTTA 59.708 40.000 0.00 0.00 0.00 1.52
2393 2611 6.481134 GGCTATAAACCTTACACGCTTTTAC 58.519 40.000 0.00 0.00 0.00 2.01
2394 2612 6.457392 GGCTATAAACCTTACACGCTTTTACC 60.457 42.308 0.00 0.00 0.00 2.85
2395 2613 6.314648 GCTATAAACCTTACACGCTTTTACCT 59.685 38.462 0.00 0.00 0.00 3.08
2396 2614 4.823790 AAACCTTACACGCTTTTACCTG 57.176 40.909 0.00 0.00 0.00 4.00
2397 2615 2.774687 ACCTTACACGCTTTTACCTGG 58.225 47.619 0.00 0.00 0.00 4.45
2398 2616 2.105306 ACCTTACACGCTTTTACCTGGT 59.895 45.455 4.05 4.05 0.00 4.00
2399 2617 3.143728 CCTTACACGCTTTTACCTGGTT 58.856 45.455 3.84 0.00 0.00 3.67
2400 2618 3.058501 CCTTACACGCTTTTACCTGGTTG 60.059 47.826 3.84 0.00 0.00 3.77
2401 2619 2.047002 ACACGCTTTTACCTGGTTGT 57.953 45.000 3.84 0.00 0.00 3.32
2402 2620 1.673920 ACACGCTTTTACCTGGTTGTG 59.326 47.619 3.84 7.46 0.00 3.33
2403 2621 0.666374 ACGCTTTTACCTGGTTGTGC 59.334 50.000 3.84 4.26 0.00 4.57
2404 2622 0.039527 CGCTTTTACCTGGTTGTGCC 60.040 55.000 3.84 0.00 37.90 5.01
2405 2623 0.317160 GCTTTTACCTGGTTGTGCCC 59.683 55.000 3.84 0.00 36.04 5.36
2406 2624 0.966179 CTTTTACCTGGTTGTGCCCC 59.034 55.000 3.84 0.00 36.04 5.80
2407 2625 0.261991 TTTTACCTGGTTGTGCCCCA 59.738 50.000 3.84 0.00 36.04 4.96
2408 2626 0.468400 TTTACCTGGTTGTGCCCCAC 60.468 55.000 3.84 0.00 36.04 4.61
2409 2627 2.684192 TTACCTGGTTGTGCCCCACG 62.684 60.000 3.84 0.00 37.14 4.94
2425 2643 1.515954 ACGCCCGTGAGACTTATGG 59.484 57.895 0.00 0.00 0.00 2.74
2426 2644 1.255667 ACGCCCGTGAGACTTATGGT 61.256 55.000 4.88 0.00 0.00 3.55
2427 2645 0.742505 CGCCCGTGAGACTTATGGTA 59.257 55.000 4.88 0.00 0.00 3.25
2428 2646 1.340248 CGCCCGTGAGACTTATGGTAT 59.660 52.381 4.88 0.00 0.00 2.73
2429 2647 2.223971 CGCCCGTGAGACTTATGGTATT 60.224 50.000 4.88 0.00 0.00 1.89
2430 2648 3.005050 CGCCCGTGAGACTTATGGTATTA 59.995 47.826 4.88 0.00 0.00 0.98
2431 2649 4.557205 GCCCGTGAGACTTATGGTATTAG 58.443 47.826 4.88 0.00 0.00 1.73
2432 2650 4.038883 GCCCGTGAGACTTATGGTATTAGT 59.961 45.833 4.88 0.00 0.00 2.24
2433 2651 5.242393 GCCCGTGAGACTTATGGTATTAGTA 59.758 44.000 4.88 0.00 0.00 1.82
2434 2652 6.071503 GCCCGTGAGACTTATGGTATTAGTAT 60.072 42.308 4.88 0.00 0.00 2.12
2435 2653 7.536855 CCCGTGAGACTTATGGTATTAGTATC 58.463 42.308 4.88 0.00 32.31 2.24
2436 2654 7.393796 CCCGTGAGACTTATGGTATTAGTATCT 59.606 40.741 4.88 0.00 32.76 1.98
2437 2655 8.794553 CCGTGAGACTTATGGTATTAGTATCTT 58.205 37.037 0.00 0.00 32.76 2.40
2460 2678 9.212687 TCTTTAAACTTTGTCGAAATGTTAACG 57.787 29.630 0.26 0.00 0.00 3.18
2461 2679 7.895582 TTAAACTTTGTCGAAATGTTAACGG 57.104 32.000 0.26 0.00 0.00 4.44
2462 2680 5.488645 AACTTTGTCGAAATGTTAACGGT 57.511 34.783 0.26 0.00 0.00 4.83
2463 2681 5.086888 ACTTTGTCGAAATGTTAACGGTC 57.913 39.130 0.26 0.00 0.00 4.79
2464 2682 4.024641 ACTTTGTCGAAATGTTAACGGTCC 60.025 41.667 0.26 0.00 0.00 4.46
2465 2683 3.109044 TGTCGAAATGTTAACGGTCCA 57.891 42.857 0.26 0.00 0.00 4.02
2466 2684 3.666274 TGTCGAAATGTTAACGGTCCAT 58.334 40.909 0.26 0.00 0.00 3.41
2467 2685 4.066490 TGTCGAAATGTTAACGGTCCATT 58.934 39.130 0.26 0.00 0.00 3.16
2468 2686 4.515944 TGTCGAAATGTTAACGGTCCATTT 59.484 37.500 9.94 9.94 40.47 2.32
2469 2687 5.699915 TGTCGAAATGTTAACGGTCCATTTA 59.300 36.000 10.09 0.00 38.53 1.40
2470 2688 6.128499 TGTCGAAATGTTAACGGTCCATTTAG 60.128 38.462 10.09 10.28 38.53 1.85
2471 2689 6.091169 GTCGAAATGTTAACGGTCCATTTAGA 59.909 38.462 13.57 13.57 38.53 2.10
2472 2690 6.649973 TCGAAATGTTAACGGTCCATTTAGAA 59.350 34.615 14.59 2.74 38.53 2.10
2473 2691 7.334921 TCGAAATGTTAACGGTCCATTTAGAAT 59.665 33.333 14.59 0.00 38.53 2.40
2474 2692 7.966204 CGAAATGTTAACGGTCCATTTAGAATT 59.034 33.333 10.09 0.00 38.53 2.17
2475 2693 9.634163 GAAATGTTAACGGTCCATTTAGAATTT 57.366 29.630 10.09 0.00 38.53 1.82
2495 2713 9.675464 AGAATTTATTTCTTAATACCGTGGTCA 57.325 29.630 0.00 0.00 42.15 4.02
2501 2719 6.503589 TTCTTAATACCGTGGTCAAATTGG 57.496 37.500 0.00 0.00 0.00 3.16
2502 2720 4.944930 TCTTAATACCGTGGTCAAATTGGG 59.055 41.667 0.00 0.00 0.00 4.12
2503 2721 1.470051 ATACCGTGGTCAAATTGGGC 58.530 50.000 0.00 0.00 0.00 5.36
2504 2722 0.402504 TACCGTGGTCAAATTGGGCT 59.597 50.000 0.00 0.00 0.00 5.19
2505 2723 0.893727 ACCGTGGTCAAATTGGGCTC 60.894 55.000 0.00 0.00 0.00 4.70
2506 2724 0.609131 CCGTGGTCAAATTGGGCTCT 60.609 55.000 0.00 0.00 0.00 4.09
2507 2725 1.247567 CGTGGTCAAATTGGGCTCTT 58.752 50.000 0.00 0.00 0.00 2.85
2508 2726 1.068333 CGTGGTCAAATTGGGCTCTTG 60.068 52.381 0.00 0.00 0.00 3.02
2509 2727 0.968405 TGGTCAAATTGGGCTCTTGC 59.032 50.000 0.00 0.00 38.76 4.01
2510 2728 1.260544 GGTCAAATTGGGCTCTTGCT 58.739 50.000 0.00 0.00 39.59 3.91
2511 2729 1.620323 GGTCAAATTGGGCTCTTGCTT 59.380 47.619 0.00 0.00 39.59 3.91
2512 2730 2.353109 GGTCAAATTGGGCTCTTGCTTC 60.353 50.000 0.00 0.00 39.59 3.86
2513 2731 2.297033 GTCAAATTGGGCTCTTGCTTCA 59.703 45.455 0.00 0.00 39.59 3.02
2514 2732 2.964464 TCAAATTGGGCTCTTGCTTCAA 59.036 40.909 0.00 0.00 39.59 2.69
2515 2733 3.579586 TCAAATTGGGCTCTTGCTTCAAT 59.420 39.130 0.00 0.00 41.06 2.57
2516 2734 3.881937 AATTGGGCTCTTGCTTCAATC 57.118 42.857 0.00 0.00 39.73 2.67
2517 2735 1.167851 TTGGGCTCTTGCTTCAATCG 58.832 50.000 0.00 0.00 39.59 3.34
2518 2736 1.308069 TGGGCTCTTGCTTCAATCGC 61.308 55.000 0.00 0.00 39.59 4.58
2519 2737 1.028868 GGGCTCTTGCTTCAATCGCT 61.029 55.000 0.00 0.00 39.59 4.93
2520 2738 0.376502 GGCTCTTGCTTCAATCGCTC 59.623 55.000 0.00 0.00 39.59 5.03
2521 2739 0.376502 GCTCTTGCTTCAATCGCTCC 59.623 55.000 0.00 0.00 36.03 4.70
2522 2740 2.011046 GCTCTTGCTTCAATCGCTCCT 61.011 52.381 0.00 0.00 36.03 3.69
2523 2741 2.354259 CTCTTGCTTCAATCGCTCCTT 58.646 47.619 0.00 0.00 0.00 3.36
2524 2742 2.746362 CTCTTGCTTCAATCGCTCCTTT 59.254 45.455 0.00 0.00 0.00 3.11
2525 2743 2.744202 TCTTGCTTCAATCGCTCCTTTC 59.256 45.455 0.00 0.00 0.00 2.62
2526 2744 2.183478 TGCTTCAATCGCTCCTTTCA 57.817 45.000 0.00 0.00 0.00 2.69
2527 2745 2.503331 TGCTTCAATCGCTCCTTTCAA 58.497 42.857 0.00 0.00 0.00 2.69
2528 2746 2.884012 TGCTTCAATCGCTCCTTTCAAA 59.116 40.909 0.00 0.00 0.00 2.69
2529 2747 3.507233 TGCTTCAATCGCTCCTTTCAAAT 59.493 39.130 0.00 0.00 0.00 2.32
2530 2748 4.022068 TGCTTCAATCGCTCCTTTCAAATT 60.022 37.500 0.00 0.00 0.00 1.82
2531 2749 4.325472 GCTTCAATCGCTCCTTTCAAATTG 59.675 41.667 0.00 0.00 0.00 2.32
2532 2750 5.702865 CTTCAATCGCTCCTTTCAAATTGA 58.297 37.500 0.00 0.00 32.83 2.57
2533 2751 5.902613 TCAATCGCTCCTTTCAAATTGAT 57.097 34.783 0.00 0.00 30.47 2.57
2534 2752 5.643664 TCAATCGCTCCTTTCAAATTGATG 58.356 37.500 0.00 0.00 30.47 3.07
2535 2753 5.183713 TCAATCGCTCCTTTCAAATTGATGT 59.816 36.000 0.00 0.00 30.47 3.06
2536 2754 5.649782 ATCGCTCCTTTCAAATTGATGTT 57.350 34.783 0.00 0.00 0.00 2.71
2537 2755 5.046910 TCGCTCCTTTCAAATTGATGTTC 57.953 39.130 0.00 0.00 0.00 3.18
2538 2756 4.082787 TCGCTCCTTTCAAATTGATGTTCC 60.083 41.667 0.00 0.00 0.00 3.62
2539 2757 4.321156 CGCTCCTTTCAAATTGATGTTCCA 60.321 41.667 0.00 0.00 0.00 3.53
2540 2758 5.540911 GCTCCTTTCAAATTGATGTTCCAA 58.459 37.500 0.00 0.00 0.00 3.53
2541 2759 6.168389 GCTCCTTTCAAATTGATGTTCCAAT 58.832 36.000 0.00 0.00 38.30 3.16
2542 2760 7.322664 GCTCCTTTCAAATTGATGTTCCAATA 58.677 34.615 0.00 0.00 35.86 1.90
2543 2761 7.983484 GCTCCTTTCAAATTGATGTTCCAATAT 59.017 33.333 0.00 0.00 35.86 1.28
2544 2762 9.525409 CTCCTTTCAAATTGATGTTCCAATATC 57.475 33.333 0.00 0.00 35.86 1.63
2545 2763 9.258629 TCCTTTCAAATTGATGTTCCAATATCT 57.741 29.630 0.00 0.00 35.86 1.98
2546 2764 9.525409 CCTTTCAAATTGATGTTCCAATATCTC 57.475 33.333 0.00 0.00 35.86 2.75
2547 2765 9.525409 CTTTCAAATTGATGTTCCAATATCTCC 57.475 33.333 0.00 0.00 35.86 3.71
2548 2766 8.827832 TTCAAATTGATGTTCCAATATCTCCT 57.172 30.769 0.00 0.00 35.86 3.69
2549 2767 8.229253 TCAAATTGATGTTCCAATATCTCCTG 57.771 34.615 0.00 0.00 35.86 3.86
2550 2768 6.645790 AATTGATGTTCCAATATCTCCTGC 57.354 37.500 0.00 0.00 35.86 4.85
2551 2769 5.378230 TTGATGTTCCAATATCTCCTGCT 57.622 39.130 0.00 0.00 0.00 4.24
2552 2770 4.965814 TGATGTTCCAATATCTCCTGCTC 58.034 43.478 0.00 0.00 0.00 4.26
2553 2771 3.845781 TGTTCCAATATCTCCTGCTCC 57.154 47.619 0.00 0.00 0.00 4.70
2554 2772 2.439507 TGTTCCAATATCTCCTGCTCCC 59.560 50.000 0.00 0.00 0.00 4.30
2555 2773 1.342074 TCCAATATCTCCTGCTCCCG 58.658 55.000 0.00 0.00 0.00 5.14
2556 2774 0.322975 CCAATATCTCCTGCTCCCGG 59.677 60.000 0.00 0.00 0.00 5.73
2557 2775 0.322975 CAATATCTCCTGCTCCCGGG 59.677 60.000 16.85 16.85 38.98 5.73
2558 2776 0.104934 AATATCTCCTGCTCCCGGGT 60.105 55.000 22.86 0.00 38.71 5.28
2559 2777 0.104934 ATATCTCCTGCTCCCGGGTT 60.105 55.000 22.86 0.00 38.71 4.11
2560 2778 0.559205 TATCTCCTGCTCCCGGGTTA 59.441 55.000 22.86 7.17 38.71 2.85
2561 2779 0.104934 ATCTCCTGCTCCCGGGTTAT 60.105 55.000 22.86 0.70 38.71 1.89
2562 2780 1.048724 TCTCCTGCTCCCGGGTTATG 61.049 60.000 22.86 10.64 38.71 1.90
2563 2781 1.306654 TCCTGCTCCCGGGTTATGT 60.307 57.895 22.86 0.00 38.71 2.29
2564 2782 1.153168 CCTGCTCCCGGGTTATGTG 60.153 63.158 22.86 7.17 32.47 3.21
2565 2783 1.602237 CTGCTCCCGGGTTATGTGT 59.398 57.895 22.86 0.00 0.00 3.72
2566 2784 0.462047 CTGCTCCCGGGTTATGTGTC 60.462 60.000 22.86 2.43 0.00 3.67
2567 2785 1.520787 GCTCCCGGGTTATGTGTCG 60.521 63.158 22.86 0.04 0.00 4.35
2568 2786 1.520787 CTCCCGGGTTATGTGTCGC 60.521 63.158 22.86 0.00 0.00 5.19
2569 2787 1.956629 CTCCCGGGTTATGTGTCGCT 61.957 60.000 22.86 0.00 0.00 4.93
2570 2788 1.813753 CCCGGGTTATGTGTCGCTG 60.814 63.158 14.18 0.00 0.00 5.18
2571 2789 1.079405 CCGGGTTATGTGTCGCTGT 60.079 57.895 0.00 0.00 0.00 4.40
2572 2790 0.672401 CCGGGTTATGTGTCGCTGTT 60.672 55.000 0.00 0.00 0.00 3.16
2573 2791 0.442310 CGGGTTATGTGTCGCTGTTG 59.558 55.000 0.00 0.00 0.00 3.33
2574 2792 0.168128 GGGTTATGTGTCGCTGTTGC 59.832 55.000 0.00 0.00 0.00 4.17
2575 2793 1.156736 GGTTATGTGTCGCTGTTGCT 58.843 50.000 0.00 0.00 36.97 3.91
2576 2794 1.128692 GGTTATGTGTCGCTGTTGCTC 59.871 52.381 0.00 0.00 36.97 4.26
2577 2795 2.069273 GTTATGTGTCGCTGTTGCTCT 58.931 47.619 0.00 0.00 36.97 4.09
2578 2796 2.455674 TATGTGTCGCTGTTGCTCTT 57.544 45.000 0.00 0.00 36.97 2.85
2579 2797 1.151668 ATGTGTCGCTGTTGCTCTTC 58.848 50.000 0.00 0.00 36.97 2.87
2580 2798 0.880278 TGTGTCGCTGTTGCTCTTCC 60.880 55.000 0.00 0.00 36.97 3.46
2581 2799 1.301716 TGTCGCTGTTGCTCTTCCC 60.302 57.895 0.00 0.00 36.97 3.97
2582 2800 1.004440 GTCGCTGTTGCTCTTCCCT 60.004 57.895 0.00 0.00 36.97 4.20
2583 2801 1.004560 TCGCTGTTGCTCTTCCCTG 60.005 57.895 0.00 0.00 36.97 4.45
2584 2802 2.037136 CGCTGTTGCTCTTCCCTGG 61.037 63.158 0.00 0.00 36.97 4.45
2585 2803 2.338785 GCTGTTGCTCTTCCCTGGC 61.339 63.158 0.00 0.00 36.03 4.85
2586 2804 1.073722 CTGTTGCTCTTCCCTGGCA 59.926 57.895 0.00 0.00 0.00 4.92
2587 2805 0.323178 CTGTTGCTCTTCCCTGGCAT 60.323 55.000 0.00 0.00 35.84 4.40
2588 2806 0.112995 TGTTGCTCTTCCCTGGCATT 59.887 50.000 0.00 0.00 35.84 3.56
2589 2807 0.529378 GTTGCTCTTCCCTGGCATTG 59.471 55.000 0.00 0.00 35.84 2.82
2590 2808 0.405198 TTGCTCTTCCCTGGCATTGA 59.595 50.000 0.00 0.00 35.84 2.57
2591 2809 0.322816 TGCTCTTCCCTGGCATTGAC 60.323 55.000 0.00 0.00 0.00 3.18
2592 2810 0.322816 GCTCTTCCCTGGCATTGACA 60.323 55.000 0.00 0.00 0.00 3.58
2593 2811 1.747709 CTCTTCCCTGGCATTGACAG 58.252 55.000 12.88 12.88 38.64 3.51
2594 2812 1.280133 CTCTTCCCTGGCATTGACAGA 59.720 52.381 21.41 0.00 42.14 3.41
2595 2813 1.918262 TCTTCCCTGGCATTGACAGAT 59.082 47.619 21.41 0.00 42.14 2.90
2596 2814 2.309755 TCTTCCCTGGCATTGACAGATT 59.690 45.455 21.41 0.00 42.14 2.40
2597 2815 2.425143 TCCCTGGCATTGACAGATTC 57.575 50.000 21.41 0.00 42.14 2.52
2598 2816 1.064463 TCCCTGGCATTGACAGATTCC 60.064 52.381 21.41 0.00 42.14 3.01
2599 2817 1.064166 CCCTGGCATTGACAGATTCCT 60.064 52.381 21.41 0.00 42.14 3.36
2600 2818 2.173356 CCCTGGCATTGACAGATTCCTA 59.827 50.000 21.41 0.00 42.14 2.94
2601 2819 3.474600 CCTGGCATTGACAGATTCCTAG 58.525 50.000 21.41 0.00 42.14 3.02
2602 2820 3.474600 CTGGCATTGACAGATTCCTAGG 58.525 50.000 14.71 0.82 42.14 3.02
2603 2821 2.846206 TGGCATTGACAGATTCCTAGGT 59.154 45.455 9.08 0.00 0.00 3.08
2604 2822 4.037222 TGGCATTGACAGATTCCTAGGTA 58.963 43.478 9.08 0.00 0.00 3.08
2605 2823 4.141711 TGGCATTGACAGATTCCTAGGTAC 60.142 45.833 9.08 1.68 0.00 3.34
2606 2824 4.141711 GGCATTGACAGATTCCTAGGTACA 60.142 45.833 9.08 0.00 0.00 2.90
2607 2825 5.428253 GCATTGACAGATTCCTAGGTACAA 58.572 41.667 9.08 0.00 0.00 2.41
2608 2826 6.058183 GCATTGACAGATTCCTAGGTACAAT 58.942 40.000 9.08 0.75 0.00 2.71
2609 2827 6.017605 GCATTGACAGATTCCTAGGTACAATG 60.018 42.308 17.39 17.39 42.34 2.82
2610 2828 6.620877 TTGACAGATTCCTAGGTACAATGT 57.379 37.500 9.08 8.69 0.00 2.71
2611 2829 6.222038 TGACAGATTCCTAGGTACAATGTC 57.778 41.667 20.26 20.26 36.08 3.06
2612 2830 5.719563 TGACAGATTCCTAGGTACAATGTCA 59.280 40.000 23.28 23.28 41.42 3.58
2613 2831 6.127338 TGACAGATTCCTAGGTACAATGTCAG 60.127 42.308 23.28 6.28 39.49 3.51
2614 2832 5.958380 ACAGATTCCTAGGTACAATGTCAGA 59.042 40.000 9.08 0.00 0.00 3.27
2615 2833 6.097554 ACAGATTCCTAGGTACAATGTCAGAG 59.902 42.308 9.08 0.00 0.00 3.35
2616 2834 4.737855 TTCCTAGGTACAATGTCAGAGC 57.262 45.455 9.08 0.00 0.00 4.09
2617 2835 3.982516 TCCTAGGTACAATGTCAGAGCT 58.017 45.455 9.08 0.00 0.00 4.09
2618 2836 5.125367 TCCTAGGTACAATGTCAGAGCTA 57.875 43.478 9.08 0.00 0.00 3.32
2619 2837 5.706447 TCCTAGGTACAATGTCAGAGCTAT 58.294 41.667 9.08 0.00 0.00 2.97
2620 2838 5.536538 TCCTAGGTACAATGTCAGAGCTATG 59.463 44.000 9.08 0.69 0.00 2.23
2621 2839 5.303078 CCTAGGTACAATGTCAGAGCTATGT 59.697 44.000 8.44 0.00 0.00 2.29
2622 2840 5.683876 AGGTACAATGTCAGAGCTATGTT 57.316 39.130 8.44 0.00 0.00 2.71
2623 2841 5.423015 AGGTACAATGTCAGAGCTATGTTG 58.577 41.667 8.44 8.31 0.00 3.33
2624 2842 5.187772 AGGTACAATGTCAGAGCTATGTTGA 59.812 40.000 14.83 2.15 0.00 3.18
2625 2843 5.521735 GGTACAATGTCAGAGCTATGTTGAG 59.478 44.000 14.83 3.84 0.00 3.02
2626 2844 4.511527 ACAATGTCAGAGCTATGTTGAGG 58.488 43.478 14.83 4.42 0.00 3.86
2627 2845 2.680312 TGTCAGAGCTATGTTGAGGC 57.320 50.000 8.44 0.00 0.00 4.70
2628 2846 1.208052 TGTCAGAGCTATGTTGAGGCC 59.792 52.381 8.44 0.00 0.00 5.19
2629 2847 1.208052 GTCAGAGCTATGTTGAGGCCA 59.792 52.381 5.01 0.00 0.00 5.36
2630 2848 1.483827 TCAGAGCTATGTTGAGGCCAG 59.516 52.381 5.01 0.00 0.00 4.85
2631 2849 0.835941 AGAGCTATGTTGAGGCCAGG 59.164 55.000 5.01 0.00 0.00 4.45
2632 2850 0.179034 GAGCTATGTTGAGGCCAGGG 60.179 60.000 5.01 0.00 0.00 4.45
2633 2851 1.152881 GCTATGTTGAGGCCAGGGG 60.153 63.158 5.01 0.00 0.00 4.79
2634 2852 1.533711 CTATGTTGAGGCCAGGGGG 59.466 63.158 5.01 0.00 37.18 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.216898 CTATAAGCACTGGAGCAAGCC 58.783 52.381 0.00 0.00 36.85 4.35
12 13 3.243535 CGATGACTATAAGCACTGGAGCA 60.244 47.826 0.00 0.00 36.85 4.26
14 15 3.005261 AGCGATGACTATAAGCACTGGAG 59.995 47.826 0.00 0.00 0.00 3.86
24 25 7.110155 TCATGTATCACCTAGCGATGACTATA 58.890 38.462 0.00 0.00 0.00 1.31
35 36 6.586344 ACAACCAGATTCATGTATCACCTAG 58.414 40.000 13.98 4.42 0.00 3.02
165 168 4.169508 TGACATTGTTTGTTTGTTCACCG 58.830 39.130 0.00 0.00 39.18 4.94
170 173 7.721286 TGTTTCTTGACATTGTTTGTTTGTT 57.279 28.000 0.00 0.00 39.18 2.83
171 174 7.440856 ACTTGTTTCTTGACATTGTTTGTTTGT 59.559 29.630 0.00 0.00 39.18 2.83
172 175 7.795859 ACTTGTTTCTTGACATTGTTTGTTTG 58.204 30.769 0.00 0.00 39.18 2.93
173 176 7.961325 ACTTGTTTCTTGACATTGTTTGTTT 57.039 28.000 0.00 0.00 39.18 2.83
176 179 6.589523 TGGAACTTGTTTCTTGACATTGTTTG 59.410 34.615 0.00 0.00 34.26 2.93
189 192 8.900762 CAAATTTGTTTGTTTGGAACTTGTTTC 58.099 29.630 10.15 0.00 32.96 2.78
199 202 4.092675 ACGCTGTCAAATTTGTTTGTTTGG 59.907 37.500 17.47 4.40 36.30 3.28
204 207 5.034152 AGTGTACGCTGTCAAATTTGTTTG 58.966 37.500 17.47 9.66 0.00 2.93
218 224 5.297547 TCAGATCTTTTTCAAGTGTACGCT 58.702 37.500 2.24 2.24 0.00 5.07
266 273 2.134201 GCTAGTGCGTTTTTGCCTTT 57.866 45.000 0.00 0.00 0.00 3.11
267 274 3.865700 GCTAGTGCGTTTTTGCCTT 57.134 47.368 0.00 0.00 0.00 4.35
285 292 1.142748 CCTTAGTCTGAGGGCAGCG 59.857 63.158 2.59 0.00 42.01 5.18
288 295 1.902508 CTGTTCCTTAGTCTGAGGGCA 59.097 52.381 10.65 9.10 34.93 5.36
291 298 2.354203 GCCACTGTTCCTTAGTCTGAGG 60.354 54.545 4.22 4.22 35.53 3.86
308 315 1.336795 GCTTGTACATTTGTGGGCCAC 60.337 52.381 29.75 29.75 34.56 5.01
331 338 2.046892 CCGTGTCAAGGCCTCCTG 60.047 66.667 5.23 0.52 32.13 3.86
333 340 1.376037 CTTCCGTGTCAAGGCCTCC 60.376 63.158 5.23 0.00 0.00 4.30
369 376 1.007387 CCTGTTTTTCTGCGGGTGC 60.007 57.895 0.00 0.00 43.20 5.01
378 385 2.190161 GAACGTGTTGGCCTGTTTTTC 58.810 47.619 3.32 0.00 0.00 2.29
387 525 0.531974 TCTGAGTGGAACGTGTTGGC 60.532 55.000 0.00 0.00 45.86 4.52
412 550 0.248702 TTCGTGCCGGCTTGTTTTTC 60.249 50.000 29.70 6.68 0.00 2.29
424 562 3.116531 GTGCTACCCGTTCGTGCC 61.117 66.667 0.00 0.00 0.00 5.01
507 645 5.866633 GCTATATCACATCTAAGTCCACAGC 59.133 44.000 0.00 0.00 0.00 4.40
539 677 6.091849 CGGATTGGCTAAATCACATCTAGATG 59.908 42.308 27.63 27.63 45.69 2.90
597 736 4.150804 GTCGAGTCCAGATCAGTTTTTGTC 59.849 45.833 0.00 0.00 0.00 3.18
626 765 1.349026 CTGCCCACTTGGAAGAAGAGA 59.651 52.381 0.00 0.00 37.39 3.10
627 766 1.818642 CTGCCCACTTGGAAGAAGAG 58.181 55.000 0.00 0.00 37.39 2.85
730 870 1.728068 GGAGGAAGGAAAGACGAAGC 58.272 55.000 0.00 0.00 0.00 3.86
731 871 1.272769 ACGGAGGAAGGAAAGACGAAG 59.727 52.381 0.00 0.00 0.00 3.79
732 872 1.335145 ACGGAGGAAGGAAAGACGAA 58.665 50.000 0.00 0.00 0.00 3.85
733 873 1.271656 GAACGGAGGAAGGAAAGACGA 59.728 52.381 0.00 0.00 0.00 4.20
734 874 1.711206 GAACGGAGGAAGGAAAGACG 58.289 55.000 0.00 0.00 0.00 4.18
735 875 1.711206 CGAACGGAGGAAGGAAAGAC 58.289 55.000 0.00 0.00 0.00 3.01
736 876 0.037605 GCGAACGGAGGAAGGAAAGA 60.038 55.000 0.00 0.00 0.00 2.52
737 877 1.352156 CGCGAACGGAGGAAGGAAAG 61.352 60.000 0.00 0.00 34.97 2.62
738 878 1.373748 CGCGAACGGAGGAAGGAAA 60.374 57.895 0.00 0.00 34.97 3.13
739 879 2.260434 CGCGAACGGAGGAAGGAA 59.740 61.111 0.00 0.00 34.97 3.36
740 880 4.430765 GCGCGAACGGAGGAAGGA 62.431 66.667 12.10 0.00 40.57 3.36
748 888 4.084888 GAAGGTTGGCGCGAACGG 62.085 66.667 25.72 0.00 40.57 4.44
772 912 4.876081 GCATGGAGCGCGCGAAAG 62.876 66.667 37.18 16.82 0.00 2.62
803 943 1.125093 TTTGGACGAGGAAGCCAGGA 61.125 55.000 0.00 0.00 32.47 3.86
805 945 1.373570 GATTTGGACGAGGAAGCCAG 58.626 55.000 0.00 0.00 32.47 4.85
806 946 0.391130 CGATTTGGACGAGGAAGCCA 60.391 55.000 0.00 0.00 0.00 4.75
807 947 0.108329 TCGATTTGGACGAGGAAGCC 60.108 55.000 0.00 0.00 34.85 4.35
808 948 3.436001 TCGATTTGGACGAGGAAGC 57.564 52.632 0.00 0.00 34.85 3.86
929 1095 1.673920 GATCTCCCTCGATCGATAGGC 59.326 57.143 19.78 6.15 31.43 3.93
930 1096 2.992593 TGATCTCCCTCGATCGATAGG 58.007 52.381 19.78 21.31 42.10 2.57
932 1098 4.022413 AGTTGATCTCCCTCGATCGATA 57.978 45.455 19.78 6.53 42.10 2.92
933 1099 2.870175 AGTTGATCTCCCTCGATCGAT 58.130 47.619 19.78 1.60 42.10 3.59
934 1100 2.350057 AGTTGATCTCCCTCGATCGA 57.650 50.000 18.32 18.32 42.10 3.59
1146 1324 1.525077 CGAGGACGAGGAGGAGGAG 60.525 68.421 0.00 0.00 42.66 3.69
1653 1831 0.040870 CTCGGGTCATCGTCGATCAG 60.041 60.000 4.34 0.00 32.32 2.90
1661 1839 1.655329 GGCTAGTCTCGGGTCATCG 59.345 63.158 0.00 0.00 0.00 3.84
1665 1843 2.772691 CCACGGCTAGTCTCGGGTC 61.773 68.421 0.00 0.00 0.00 4.46
1666 1844 2.754658 CCACGGCTAGTCTCGGGT 60.755 66.667 0.00 0.00 0.00 5.28
1667 1845 2.005960 CTTCCACGGCTAGTCTCGGG 62.006 65.000 0.00 0.00 0.00 5.14
1668 1846 1.030488 TCTTCCACGGCTAGTCTCGG 61.030 60.000 0.00 0.00 0.00 4.63
1669 1847 0.809385 TTCTTCCACGGCTAGTCTCG 59.191 55.000 0.00 0.00 0.00 4.04
1670 1848 1.467713 CGTTCTTCCACGGCTAGTCTC 60.468 57.143 0.00 0.00 36.47 3.36
1671 1849 0.526662 CGTTCTTCCACGGCTAGTCT 59.473 55.000 0.00 0.00 36.47 3.24
1760 1942 2.351210 CGGCGGCTACGTACGTAC 60.351 66.667 23.60 18.69 43.45 3.67
1761 1943 3.572539 CCGGCGGCTACGTACGTA 61.573 66.667 25.41 25.41 43.45 3.57
1763 1945 4.894203 GTCCGGCGGCTACGTACG 62.894 72.222 23.83 15.01 43.45 3.67
1764 1946 4.559229 GGTCCGGCGGCTACGTAC 62.559 72.222 23.83 13.20 43.45 3.67
1873 2055 2.100797 CGCGTACGTCCAATCGGA 59.899 61.111 17.90 0.00 39.79 4.55
1875 2057 2.578713 AGCGCGTACGTCCAATCG 60.579 61.111 17.90 11.52 42.83 3.34
1997 2187 3.033909 CACATGACCTCCATCACTAGGA 58.966 50.000 0.00 0.00 36.66 2.94
1998 2188 2.768527 ACACATGACCTCCATCACTAGG 59.231 50.000 0.00 0.00 38.93 3.02
1999 2189 3.448660 TCACACATGACCTCCATCACTAG 59.551 47.826 0.00 0.00 31.94 2.57
2000 2190 3.440127 TCACACATGACCTCCATCACTA 58.560 45.455 0.00 0.00 31.94 2.74
2001 2191 2.235650 CTCACACATGACCTCCATCACT 59.764 50.000 0.00 0.00 31.94 3.41
2002 2192 2.625737 CTCACACATGACCTCCATCAC 58.374 52.381 0.00 0.00 31.94 3.06
2003 2193 1.556451 CCTCACACATGACCTCCATCA 59.444 52.381 0.00 0.00 31.94 3.07
2006 2196 1.841302 GCCCTCACACATGACCTCCA 61.841 60.000 0.00 0.00 0.00 3.86
2007 2197 1.078143 GCCCTCACACATGACCTCC 60.078 63.158 0.00 0.00 0.00 4.30
2010 2200 1.660560 GCATGCCCTCACACATGACC 61.661 60.000 6.36 0.00 45.23 4.02
2011 2201 0.961857 TGCATGCCCTCACACATGAC 60.962 55.000 16.68 0.04 45.23 3.06
2012 2202 0.033894 ATGCATGCCCTCACACATGA 60.034 50.000 16.68 0.00 45.23 3.07
2013 2203 1.682740 TATGCATGCCCTCACACATG 58.317 50.000 16.68 0.00 45.19 3.21
2014 2204 2.107726 AGATATGCATGCCCTCACACAT 59.892 45.455 16.68 1.35 0.00 3.21
2015 2205 1.491754 AGATATGCATGCCCTCACACA 59.508 47.619 16.68 0.00 0.00 3.72
2016 2206 2.149578 GAGATATGCATGCCCTCACAC 58.850 52.381 16.68 0.35 0.00 3.82
2017 2207 2.052468 AGAGATATGCATGCCCTCACA 58.948 47.619 16.68 0.00 0.00 3.58
2018 2208 2.224475 ACAGAGATATGCATGCCCTCAC 60.224 50.000 16.68 7.80 0.00 3.51
2019 2209 2.038164 GACAGAGATATGCATGCCCTCA 59.962 50.000 16.68 0.00 0.00 3.86
2020 2210 2.038164 TGACAGAGATATGCATGCCCTC 59.962 50.000 16.68 15.40 0.00 4.30
2021 2211 2.052468 TGACAGAGATATGCATGCCCT 58.948 47.619 16.68 6.97 0.00 5.19
2022 2212 2.556144 TGACAGAGATATGCATGCCC 57.444 50.000 16.68 1.66 0.00 5.36
2023 2213 3.008330 GGATGACAGAGATATGCATGCC 58.992 50.000 16.68 0.00 0.00 4.40
2024 2214 3.671716 TGGATGACAGAGATATGCATGC 58.328 45.455 11.82 11.82 0.00 4.06
2025 2215 5.763698 ACTTTGGATGACAGAGATATGCATG 59.236 40.000 10.16 0.00 35.02 4.06
2026 2216 5.763698 CACTTTGGATGACAGAGATATGCAT 59.236 40.000 3.79 3.79 35.02 3.96
2041 2249 9.912634 CATGTTTACTGAATTTACACTTTGGAT 57.087 29.630 0.00 0.00 0.00 3.41
2064 2272 9.965824 AAAACTTCACTTTATCCTTTGTACATG 57.034 29.630 0.00 0.00 0.00 3.21
2076 2289 7.547227 AGTTTGCACTGAAAACTTCACTTTAT 58.453 30.769 9.13 0.00 43.60 1.40
2103 2316 8.016801 CCAAATAAAATGGCATTCAAAGTTGTC 58.983 33.333 14.04 0.00 0.00 3.18
2118 2336 6.322201 AGACCTAGCCACATCCAAATAAAATG 59.678 38.462 0.00 0.00 0.00 2.32
2128 2346 1.410882 GACTGAGACCTAGCCACATCC 59.589 57.143 0.00 0.00 0.00 3.51
2129 2347 2.103373 TGACTGAGACCTAGCCACATC 58.897 52.381 0.00 0.00 0.00 3.06
2130 2348 2.238084 TGACTGAGACCTAGCCACAT 57.762 50.000 0.00 0.00 0.00 3.21
2131 2349 1.895798 CTTGACTGAGACCTAGCCACA 59.104 52.381 0.00 0.00 0.00 4.17
2132 2350 1.896465 ACTTGACTGAGACCTAGCCAC 59.104 52.381 0.00 0.00 0.00 5.01
2133 2351 1.895798 CACTTGACTGAGACCTAGCCA 59.104 52.381 0.00 0.00 0.00 4.75
2134 2352 2.171840 TCACTTGACTGAGACCTAGCC 58.828 52.381 0.00 0.00 0.00 3.93
2135 2353 5.782893 ATATCACTTGACTGAGACCTAGC 57.217 43.478 0.00 0.00 0.00 3.42
2136 2354 9.733556 ATACTATATCACTTGACTGAGACCTAG 57.266 37.037 0.00 0.00 0.00 3.02
2186 2404 9.847224 ATGGAGTATCGTACCAATATTCTTTTT 57.153 29.630 0.00 0.00 37.24 1.94
2187 2405 9.273016 CATGGAGTATCGTACCAATATTCTTTT 57.727 33.333 0.00 0.00 37.24 2.27
2188 2406 7.387948 GCATGGAGTATCGTACCAATATTCTTT 59.612 37.037 0.00 0.00 37.24 2.52
2189 2407 6.874134 GCATGGAGTATCGTACCAATATTCTT 59.126 38.462 0.00 0.00 37.24 2.52
2190 2408 6.014584 TGCATGGAGTATCGTACCAATATTCT 60.015 38.462 0.00 0.00 37.24 2.40
2191 2409 6.163476 TGCATGGAGTATCGTACCAATATTC 58.837 40.000 0.00 0.00 37.24 1.75
2192 2410 6.109156 TGCATGGAGTATCGTACCAATATT 57.891 37.500 0.00 0.00 37.24 1.28
2193 2411 5.738619 TGCATGGAGTATCGTACCAATAT 57.261 39.130 0.00 0.00 37.24 1.28
2194 2412 5.303333 TCTTGCATGGAGTATCGTACCAATA 59.697 40.000 0.00 0.00 37.24 1.90
2195 2413 4.100963 TCTTGCATGGAGTATCGTACCAAT 59.899 41.667 0.00 0.00 37.24 3.16
2196 2414 3.449377 TCTTGCATGGAGTATCGTACCAA 59.551 43.478 0.00 0.00 37.24 3.67
2197 2415 3.028130 TCTTGCATGGAGTATCGTACCA 58.972 45.455 0.00 0.00 38.09 3.25
2198 2416 3.728076 TCTTGCATGGAGTATCGTACC 57.272 47.619 0.00 0.00 34.37 3.34
2199 2417 5.127693 AGATCTTGCATGGAGTATCGTAC 57.872 43.478 0.00 0.00 34.37 3.67
2200 2418 5.416013 CCTAGATCTTGCATGGAGTATCGTA 59.584 44.000 0.00 0.00 34.37 3.43
2201 2419 4.219507 CCTAGATCTTGCATGGAGTATCGT 59.780 45.833 0.00 0.00 34.37 3.73
2202 2420 4.381398 CCCTAGATCTTGCATGGAGTATCG 60.381 50.000 0.00 0.00 34.37 2.92
2203 2421 4.081198 CCCCTAGATCTTGCATGGAGTATC 60.081 50.000 0.00 0.00 0.00 2.24
2204 2422 3.843027 CCCCTAGATCTTGCATGGAGTAT 59.157 47.826 0.00 0.00 0.00 2.12
2205 2423 3.116746 TCCCCTAGATCTTGCATGGAGTA 60.117 47.826 0.00 0.00 0.00 2.59
2206 2424 2.053244 CCCCTAGATCTTGCATGGAGT 58.947 52.381 0.00 0.00 0.00 3.85
2207 2425 2.038295 GTCCCCTAGATCTTGCATGGAG 59.962 54.545 0.00 0.00 0.00 3.86
2208 2426 2.050144 GTCCCCTAGATCTTGCATGGA 58.950 52.381 0.00 2.48 0.00 3.41
2209 2427 1.770658 TGTCCCCTAGATCTTGCATGG 59.229 52.381 0.00 0.00 0.00 3.66
2210 2428 3.784511 ATGTCCCCTAGATCTTGCATG 57.215 47.619 0.00 0.00 0.00 4.06
2211 2429 3.262915 GCTATGTCCCCTAGATCTTGCAT 59.737 47.826 0.00 0.52 0.00 3.96
2212 2430 2.634940 GCTATGTCCCCTAGATCTTGCA 59.365 50.000 0.00 0.00 0.00 4.08
2213 2431 2.634940 TGCTATGTCCCCTAGATCTTGC 59.365 50.000 0.00 0.00 0.00 4.01
2214 2432 4.381398 CGATGCTATGTCCCCTAGATCTTG 60.381 50.000 0.00 0.00 0.00 3.02
2215 2433 3.766591 CGATGCTATGTCCCCTAGATCTT 59.233 47.826 0.00 0.00 0.00 2.40
2216 2434 3.010696 TCGATGCTATGTCCCCTAGATCT 59.989 47.826 0.00 0.00 0.00 2.75
2217 2435 3.129638 GTCGATGCTATGTCCCCTAGATC 59.870 52.174 0.00 0.00 0.00 2.75
2218 2436 3.093057 GTCGATGCTATGTCCCCTAGAT 58.907 50.000 0.00 0.00 0.00 1.98
2219 2437 2.108425 AGTCGATGCTATGTCCCCTAGA 59.892 50.000 0.00 0.00 0.00 2.43
2220 2438 2.230025 CAGTCGATGCTATGTCCCCTAG 59.770 54.545 0.00 0.00 0.00 3.02
2221 2439 2.158519 TCAGTCGATGCTATGTCCCCTA 60.159 50.000 0.00 0.00 0.00 3.53
2222 2440 1.043816 CAGTCGATGCTATGTCCCCT 58.956 55.000 0.00 0.00 0.00 4.79
2223 2441 1.000283 CTCAGTCGATGCTATGTCCCC 60.000 57.143 0.00 0.00 0.00 4.81
2224 2442 1.957177 TCTCAGTCGATGCTATGTCCC 59.043 52.381 0.00 0.00 0.00 4.46
2225 2443 2.621055 AGTCTCAGTCGATGCTATGTCC 59.379 50.000 0.00 0.00 0.00 4.02
2226 2444 3.980646 AGTCTCAGTCGATGCTATGTC 57.019 47.619 0.00 0.00 0.00 3.06
2227 2445 4.261405 GCTAAGTCTCAGTCGATGCTATGT 60.261 45.833 0.00 0.00 0.00 2.29
2228 2446 4.225984 GCTAAGTCTCAGTCGATGCTATG 58.774 47.826 0.00 0.00 0.00 2.23
2229 2447 3.885901 TGCTAAGTCTCAGTCGATGCTAT 59.114 43.478 0.00 0.00 0.00 2.97
2230 2448 3.279434 TGCTAAGTCTCAGTCGATGCTA 58.721 45.455 0.00 0.00 0.00 3.49
2231 2449 2.095461 TGCTAAGTCTCAGTCGATGCT 58.905 47.619 0.00 0.00 0.00 3.79
2232 2450 2.568696 TGCTAAGTCTCAGTCGATGC 57.431 50.000 0.00 0.00 0.00 3.91
2233 2451 4.926238 AGTTTTGCTAAGTCTCAGTCGATG 59.074 41.667 0.00 0.00 0.00 3.84
2234 2452 4.926238 CAGTTTTGCTAAGTCTCAGTCGAT 59.074 41.667 0.00 0.00 0.00 3.59
2235 2453 4.037565 TCAGTTTTGCTAAGTCTCAGTCGA 59.962 41.667 0.00 0.00 0.00 4.20
2236 2454 4.299155 TCAGTTTTGCTAAGTCTCAGTCG 58.701 43.478 0.00 0.00 0.00 4.18
2237 2455 6.793492 AATCAGTTTTGCTAAGTCTCAGTC 57.207 37.500 0.00 0.00 0.00 3.51
2238 2456 7.573968 AAAATCAGTTTTGCTAAGTCTCAGT 57.426 32.000 0.00 0.00 36.24 3.41
2271 2489 8.826765 TGGACTAAAGGAGATCAACTAAAATCT 58.173 33.333 0.00 0.00 34.96 2.40
2272 2490 9.620259 ATGGACTAAAGGAGATCAACTAAAATC 57.380 33.333 0.00 0.00 0.00 2.17
2275 2493 9.488762 TCTATGGACTAAAGGAGATCAACTAAA 57.511 33.333 0.00 0.00 0.00 1.85
2276 2494 9.661954 ATCTATGGACTAAAGGAGATCAACTAA 57.338 33.333 0.00 0.00 0.00 2.24
2278 2496 9.836179 ATATCTATGGACTAAAGGAGATCAACT 57.164 33.333 0.00 0.00 0.00 3.16
2279 2497 9.868277 CATATCTATGGACTAAAGGAGATCAAC 57.132 37.037 0.00 0.00 0.00 3.18
2280 2498 9.828691 TCATATCTATGGACTAAAGGAGATCAA 57.171 33.333 0.00 0.00 34.50 2.57
2281 2499 9.473007 CTCATATCTATGGACTAAAGGAGATCA 57.527 37.037 0.00 0.00 34.50 2.92
2282 2500 8.912988 CCTCATATCTATGGACTAAAGGAGATC 58.087 40.741 0.00 0.00 34.50 2.75
2283 2501 8.405850 ACCTCATATCTATGGACTAAAGGAGAT 58.594 37.037 6.45 0.00 34.50 2.75
2284 2502 7.770662 ACCTCATATCTATGGACTAAAGGAGA 58.229 38.462 6.45 0.00 34.50 3.71
2285 2503 7.671819 TGACCTCATATCTATGGACTAAAGGAG 59.328 40.741 6.45 0.00 34.50 3.69
2286 2504 7.451877 GTGACCTCATATCTATGGACTAAAGGA 59.548 40.741 6.45 0.00 34.50 3.36
2287 2505 7.233553 TGTGACCTCATATCTATGGACTAAAGG 59.766 40.741 0.00 0.00 34.50 3.11
2288 2506 8.183104 TGTGACCTCATATCTATGGACTAAAG 57.817 38.462 0.00 0.00 34.50 1.85
2289 2507 8.421784 GTTGTGACCTCATATCTATGGACTAAA 58.578 37.037 0.00 0.00 34.50 1.85
2290 2508 7.015292 GGTTGTGACCTCATATCTATGGACTAA 59.985 40.741 0.00 0.00 42.99 2.24
2291 2509 6.493802 GGTTGTGACCTCATATCTATGGACTA 59.506 42.308 0.00 0.00 42.99 2.59
2292 2510 5.305644 GGTTGTGACCTCATATCTATGGACT 59.694 44.000 0.00 0.00 42.99 3.85
2293 2511 5.070446 TGGTTGTGACCTCATATCTATGGAC 59.930 44.000 0.00 0.00 46.66 4.02
2294 2512 5.070446 GTGGTTGTGACCTCATATCTATGGA 59.930 44.000 0.00 0.00 46.66 3.41
2295 2513 5.300752 GTGGTTGTGACCTCATATCTATGG 58.699 45.833 0.00 0.00 46.66 2.74
2296 2514 5.300752 GGTGGTTGTGACCTCATATCTATG 58.699 45.833 0.00 0.00 46.66 2.23
2297 2515 4.039245 CGGTGGTTGTGACCTCATATCTAT 59.961 45.833 0.00 0.00 46.66 1.98
2298 2516 3.383505 CGGTGGTTGTGACCTCATATCTA 59.616 47.826 0.00 0.00 46.66 1.98
2299 2517 2.168521 CGGTGGTTGTGACCTCATATCT 59.831 50.000 0.00 0.00 46.66 1.98
2300 2518 2.550978 CGGTGGTTGTGACCTCATATC 58.449 52.381 0.00 0.00 46.66 1.63
2301 2519 1.209504 CCGGTGGTTGTGACCTCATAT 59.790 52.381 0.00 0.00 46.66 1.78
2302 2520 0.611200 CCGGTGGTTGTGACCTCATA 59.389 55.000 0.00 0.00 46.66 2.15
2303 2521 1.374947 CCGGTGGTTGTGACCTCAT 59.625 57.895 0.00 0.00 46.66 2.90
2304 2522 2.825982 CCGGTGGTTGTGACCTCA 59.174 61.111 0.00 0.00 46.66 3.86
2305 2523 2.668550 GCCGGTGGTTGTGACCTC 60.669 66.667 1.90 0.00 46.66 3.85
2306 2524 4.619227 CGCCGGTGGTTGTGACCT 62.619 66.667 7.26 0.00 46.66 3.85
2308 2526 4.922026 ACCGCCGGTGGTTGTGAC 62.922 66.667 34.14 0.00 39.99 3.67
2317 2535 3.152400 GGTAGATCCACCGCCGGT 61.152 66.667 1.02 1.02 35.62 5.28
2323 2541 0.106116 AGAGGGACGGTAGATCCACC 60.106 60.000 0.00 0.00 38.06 4.61
2324 2542 1.777941 AAGAGGGACGGTAGATCCAC 58.222 55.000 0.00 0.00 38.06 4.02
2325 2543 2.544844 AAAGAGGGACGGTAGATCCA 57.455 50.000 0.00 0.00 38.06 3.41
2326 2544 3.908643 AAAAAGAGGGACGGTAGATCC 57.091 47.619 0.00 0.00 35.28 3.36
2343 2561 5.511202 GGAAGACAGATCAAATGCCCAAAAA 60.511 40.000 0.00 0.00 0.00 1.94
2344 2562 4.021192 GGAAGACAGATCAAATGCCCAAAA 60.021 41.667 0.00 0.00 0.00 2.44
2345 2563 3.511146 GGAAGACAGATCAAATGCCCAAA 59.489 43.478 0.00 0.00 0.00 3.28
2346 2564 3.091545 GGAAGACAGATCAAATGCCCAA 58.908 45.455 0.00 0.00 0.00 4.12
2347 2565 2.621407 GGGAAGACAGATCAAATGCCCA 60.621 50.000 0.00 0.00 33.28 5.36
2348 2566 2.027385 GGGAAGACAGATCAAATGCCC 58.973 52.381 0.00 0.00 0.00 5.36
2349 2567 1.672881 CGGGAAGACAGATCAAATGCC 59.327 52.381 0.00 0.00 0.00 4.40
2350 2568 1.672881 CCGGGAAGACAGATCAAATGC 59.327 52.381 0.00 0.00 0.00 3.56
2351 2569 1.672881 GCCGGGAAGACAGATCAAATG 59.327 52.381 2.18 0.00 0.00 2.32
2352 2570 1.561542 AGCCGGGAAGACAGATCAAAT 59.438 47.619 2.18 0.00 0.00 2.32
2353 2571 0.984230 AGCCGGGAAGACAGATCAAA 59.016 50.000 2.18 0.00 0.00 2.69
2354 2572 1.860641 TAGCCGGGAAGACAGATCAA 58.139 50.000 2.18 0.00 0.00 2.57
2355 2573 2.088104 ATAGCCGGGAAGACAGATCA 57.912 50.000 2.18 0.00 0.00 2.92
2356 2574 4.308265 GTTTATAGCCGGGAAGACAGATC 58.692 47.826 2.18 0.00 0.00 2.75
2357 2575 3.071167 GGTTTATAGCCGGGAAGACAGAT 59.929 47.826 2.18 0.00 0.00 2.90
2358 2576 2.433239 GGTTTATAGCCGGGAAGACAGA 59.567 50.000 2.18 0.00 0.00 3.41
2359 2577 2.434702 AGGTTTATAGCCGGGAAGACAG 59.565 50.000 2.18 0.00 0.00 3.51
2360 2578 2.474112 AGGTTTATAGCCGGGAAGACA 58.526 47.619 2.18 0.00 0.00 3.41
2361 2579 3.555527 AAGGTTTATAGCCGGGAAGAC 57.444 47.619 2.18 0.00 0.00 3.01
2362 2580 4.032310 TGTAAGGTTTATAGCCGGGAAGA 58.968 43.478 2.18 0.00 0.00 2.87
2363 2581 4.124970 GTGTAAGGTTTATAGCCGGGAAG 58.875 47.826 2.18 0.00 0.00 3.46
2364 2582 3.430651 CGTGTAAGGTTTATAGCCGGGAA 60.431 47.826 2.18 0.00 0.00 3.97
2365 2583 2.101249 CGTGTAAGGTTTATAGCCGGGA 59.899 50.000 2.18 0.00 0.00 5.14
2366 2584 2.476821 CGTGTAAGGTTTATAGCCGGG 58.523 52.381 2.18 0.00 0.00 5.73
2367 2585 1.862827 GCGTGTAAGGTTTATAGCCGG 59.137 52.381 0.00 0.00 0.00 6.13
2368 2586 2.817901 AGCGTGTAAGGTTTATAGCCG 58.182 47.619 0.00 0.00 0.00 5.52
2369 2587 5.556355 AAAAGCGTGTAAGGTTTATAGCC 57.444 39.130 0.00 0.00 40.43 3.93
2370 2588 6.314648 AGGTAAAAGCGTGTAAGGTTTATAGC 59.685 38.462 0.00 2.48 40.43 2.97
2371 2589 7.201582 CCAGGTAAAAGCGTGTAAGGTTTATAG 60.202 40.741 0.00 0.00 40.43 1.31
2372 2590 6.594937 CCAGGTAAAAGCGTGTAAGGTTTATA 59.405 38.462 0.00 0.00 40.43 0.98
2373 2591 5.413523 CCAGGTAAAAGCGTGTAAGGTTTAT 59.586 40.000 0.00 0.00 40.43 1.40
2374 2592 4.756135 CCAGGTAAAAGCGTGTAAGGTTTA 59.244 41.667 0.00 0.00 40.43 2.01
2375 2593 3.566742 CCAGGTAAAAGCGTGTAAGGTTT 59.433 43.478 0.00 0.00 42.74 3.27
2376 2594 3.143728 CCAGGTAAAAGCGTGTAAGGTT 58.856 45.455 0.00 0.00 0.00 3.50
2377 2595 2.105306 ACCAGGTAAAAGCGTGTAAGGT 59.895 45.455 0.00 0.00 0.00 3.50
2378 2596 2.774687 ACCAGGTAAAAGCGTGTAAGG 58.225 47.619 0.00 0.00 0.00 2.69
2379 2597 3.562557 ACAACCAGGTAAAAGCGTGTAAG 59.437 43.478 0.00 0.00 0.00 2.34
2380 2598 3.312973 CACAACCAGGTAAAAGCGTGTAA 59.687 43.478 0.00 0.00 0.00 2.41
2381 2599 2.873472 CACAACCAGGTAAAAGCGTGTA 59.127 45.455 0.00 0.00 0.00 2.90
2382 2600 1.673920 CACAACCAGGTAAAAGCGTGT 59.326 47.619 0.00 0.00 0.00 4.49
2383 2601 1.599419 GCACAACCAGGTAAAAGCGTG 60.599 52.381 0.00 0.00 0.00 5.34
2384 2602 0.666374 GCACAACCAGGTAAAAGCGT 59.334 50.000 0.00 0.00 0.00 5.07
2385 2603 0.039527 GGCACAACCAGGTAAAAGCG 60.040 55.000 0.00 0.00 38.86 4.68
2386 2604 0.317160 GGGCACAACCAGGTAAAAGC 59.683 55.000 0.00 0.00 42.05 3.51
2387 2605 0.966179 GGGGCACAACCAGGTAAAAG 59.034 55.000 0.00 0.00 42.05 2.27
2388 2606 0.261991 TGGGGCACAACCAGGTAAAA 59.738 50.000 0.00 0.00 42.05 1.52
2389 2607 0.468400 GTGGGGCACAACCAGGTAAA 60.468 55.000 0.00 0.00 42.05 2.01
2390 2608 1.151908 GTGGGGCACAACCAGGTAA 59.848 57.895 0.00 0.00 42.05 2.85
2391 2609 2.840576 GTGGGGCACAACCAGGTA 59.159 61.111 0.00 0.00 42.05 3.08
2392 2610 4.579384 CGTGGGGCACAACCAGGT 62.579 66.667 0.00 0.00 42.05 4.00
2405 2623 0.806102 CATAAGTCTCACGGGCGTGG 60.806 60.000 0.00 0.00 45.43 4.94
2406 2624 0.806102 CCATAAGTCTCACGGGCGTG 60.806 60.000 0.00 0.00 46.64 5.34
2407 2625 1.255667 ACCATAAGTCTCACGGGCGT 61.256 55.000 0.00 0.00 0.00 5.68
2408 2626 0.742505 TACCATAAGTCTCACGGGCG 59.257 55.000 0.00 0.00 0.00 6.13
2409 2627 3.470645 AATACCATAAGTCTCACGGGC 57.529 47.619 0.00 0.00 0.00 6.13
2410 2628 5.786264 ACTAATACCATAAGTCTCACGGG 57.214 43.478 0.00 0.00 0.00 5.28
2411 2629 8.338072 AGATACTAATACCATAAGTCTCACGG 57.662 38.462 0.00 0.00 0.00 4.94
2434 2652 9.212687 CGTTAACATTTCGACAAAGTTTAAAGA 57.787 29.630 6.39 0.00 0.00 2.52
2435 2653 8.466026 CCGTTAACATTTCGACAAAGTTTAAAG 58.534 33.333 6.39 1.70 0.00 1.85
2436 2654 7.967303 ACCGTTAACATTTCGACAAAGTTTAAA 59.033 29.630 6.39 0.00 0.00 1.52
2437 2655 7.470900 ACCGTTAACATTTCGACAAAGTTTAA 58.529 30.769 6.39 0.00 0.00 1.52
2438 2656 7.014092 ACCGTTAACATTTCGACAAAGTTTA 57.986 32.000 6.39 0.00 0.00 2.01
2439 2657 5.882553 ACCGTTAACATTTCGACAAAGTTT 58.117 33.333 6.39 0.00 0.00 2.66
2440 2658 5.488645 ACCGTTAACATTTCGACAAAGTT 57.511 34.783 6.39 0.00 0.00 2.66
2441 2659 4.024641 GGACCGTTAACATTTCGACAAAGT 60.025 41.667 6.39 0.00 0.00 2.66
2442 2660 4.024725 TGGACCGTTAACATTTCGACAAAG 60.025 41.667 6.39 0.00 0.00 2.77
2443 2661 3.875727 TGGACCGTTAACATTTCGACAAA 59.124 39.130 6.39 0.00 0.00 2.83
2444 2662 3.464907 TGGACCGTTAACATTTCGACAA 58.535 40.909 6.39 0.00 0.00 3.18
2445 2663 3.109044 TGGACCGTTAACATTTCGACA 57.891 42.857 6.39 0.00 0.00 4.35
2446 2664 4.673534 AATGGACCGTTAACATTTCGAC 57.326 40.909 6.39 0.00 31.21 4.20
2447 2665 6.164876 TCTAAATGGACCGTTAACATTTCGA 58.835 36.000 6.39 3.12 42.10 3.71
2448 2666 6.411630 TCTAAATGGACCGTTAACATTTCG 57.588 37.500 6.39 0.92 42.10 3.46
2449 2667 9.634163 AAATTCTAAATGGACCGTTAACATTTC 57.366 29.630 6.39 0.00 42.10 2.17
2475 2693 8.679100 CCAATTTGACCACGGTATTAAGAAATA 58.321 33.333 0.00 0.00 0.00 1.40
2476 2694 7.363443 CCCAATTTGACCACGGTATTAAGAAAT 60.363 37.037 0.00 0.00 0.00 2.17
2477 2695 6.071840 CCCAATTTGACCACGGTATTAAGAAA 60.072 38.462 0.00 0.00 0.00 2.52
2478 2696 5.416326 CCCAATTTGACCACGGTATTAAGAA 59.584 40.000 0.00 0.00 0.00 2.52
2479 2697 4.944930 CCCAATTTGACCACGGTATTAAGA 59.055 41.667 0.00 0.00 0.00 2.10
2480 2698 4.439563 GCCCAATTTGACCACGGTATTAAG 60.440 45.833 0.00 0.00 0.00 1.85
2481 2699 3.444388 GCCCAATTTGACCACGGTATTAA 59.556 43.478 0.00 0.00 0.00 1.40
2482 2700 3.018149 GCCCAATTTGACCACGGTATTA 58.982 45.455 0.00 0.00 0.00 0.98
2483 2701 1.822371 GCCCAATTTGACCACGGTATT 59.178 47.619 0.00 0.00 0.00 1.89
2484 2702 1.005450 AGCCCAATTTGACCACGGTAT 59.995 47.619 0.00 0.00 0.00 2.73
2485 2703 0.402504 AGCCCAATTTGACCACGGTA 59.597 50.000 0.00 0.00 0.00 4.02
2486 2704 0.893727 GAGCCCAATTTGACCACGGT 60.894 55.000 0.00 0.00 0.00 4.83
2487 2705 0.609131 AGAGCCCAATTTGACCACGG 60.609 55.000 0.00 0.00 0.00 4.94
2488 2706 1.068333 CAAGAGCCCAATTTGACCACG 60.068 52.381 0.00 0.00 0.00 4.94
2489 2707 1.337167 GCAAGAGCCCAATTTGACCAC 60.337 52.381 0.00 0.00 33.58 4.16
2490 2708 0.968405 GCAAGAGCCCAATTTGACCA 59.032 50.000 0.00 0.00 33.58 4.02
2491 2709 1.260544 AGCAAGAGCCCAATTTGACC 58.739 50.000 0.00 0.00 43.56 4.02
2492 2710 2.297033 TGAAGCAAGAGCCCAATTTGAC 59.703 45.455 0.00 0.00 43.56 3.18
2493 2711 2.596346 TGAAGCAAGAGCCCAATTTGA 58.404 42.857 0.00 0.00 43.56 2.69
2494 2712 3.389925 TTGAAGCAAGAGCCCAATTTG 57.610 42.857 0.00 0.00 43.56 2.32
2495 2713 3.367703 CGATTGAAGCAAGAGCCCAATTT 60.368 43.478 0.00 0.00 41.51 1.82
2496 2714 2.165030 CGATTGAAGCAAGAGCCCAATT 59.835 45.455 0.00 0.00 41.51 2.32
2497 2715 1.747355 CGATTGAAGCAAGAGCCCAAT 59.253 47.619 0.00 0.00 43.01 3.16
2498 2716 1.167851 CGATTGAAGCAAGAGCCCAA 58.832 50.000 0.00 0.00 43.56 4.12
2499 2717 1.308069 GCGATTGAAGCAAGAGCCCA 61.308 55.000 0.00 0.00 43.56 5.36
2500 2718 1.028868 AGCGATTGAAGCAAGAGCCC 61.029 55.000 0.00 0.00 43.56 5.19
2501 2719 0.376502 GAGCGATTGAAGCAAGAGCC 59.623 55.000 0.00 0.00 43.56 4.70
2502 2720 0.376502 GGAGCGATTGAAGCAAGAGC 59.623 55.000 0.00 0.00 42.56 4.09
2503 2721 2.021355 AGGAGCGATTGAAGCAAGAG 57.979 50.000 0.00 0.00 37.01 2.85
2504 2722 2.479566 AAGGAGCGATTGAAGCAAGA 57.520 45.000 0.00 0.00 37.01 3.02
2505 2723 2.485426 TGAAAGGAGCGATTGAAGCAAG 59.515 45.455 0.00 0.00 37.01 4.01
2506 2724 2.503331 TGAAAGGAGCGATTGAAGCAA 58.497 42.857 0.00 0.00 37.01 3.91
2507 2725 2.183478 TGAAAGGAGCGATTGAAGCA 57.817 45.000 0.00 0.00 37.01 3.91
2508 2726 3.559238 TTTGAAAGGAGCGATTGAAGC 57.441 42.857 0.00 0.00 0.00 3.86
2509 2727 5.702865 TCAATTTGAAAGGAGCGATTGAAG 58.297 37.500 0.00 0.00 32.43 3.02
2510 2728 5.703978 TCAATTTGAAAGGAGCGATTGAA 57.296 34.783 0.00 0.00 32.43 2.69
2511 2729 5.183713 ACATCAATTTGAAAGGAGCGATTGA 59.816 36.000 2.68 0.00 37.74 2.57
2512 2730 5.404946 ACATCAATTTGAAAGGAGCGATTG 58.595 37.500 2.68 0.00 0.00 2.67
2513 2731 5.649782 ACATCAATTTGAAAGGAGCGATT 57.350 34.783 2.68 0.00 0.00 3.34
2514 2732 5.393461 GGAACATCAATTTGAAAGGAGCGAT 60.393 40.000 2.68 0.00 0.00 4.58
2515 2733 4.082787 GGAACATCAATTTGAAAGGAGCGA 60.083 41.667 2.68 0.00 0.00 4.93
2516 2734 4.168760 GGAACATCAATTTGAAAGGAGCG 58.831 43.478 2.68 0.00 0.00 5.03
2517 2735 5.138125 TGGAACATCAATTTGAAAGGAGC 57.862 39.130 2.68 0.00 0.00 4.70
2518 2736 9.525409 GATATTGGAACATCAATTTGAAAGGAG 57.475 33.333 2.68 0.00 39.30 3.69
2519 2737 9.258629 AGATATTGGAACATCAATTTGAAAGGA 57.741 29.630 2.68 0.00 39.30 3.36
2520 2738 9.525409 GAGATATTGGAACATCAATTTGAAAGG 57.475 33.333 2.68 0.00 39.30 3.11
2521 2739 9.525409 GGAGATATTGGAACATCAATTTGAAAG 57.475 33.333 2.68 2.22 39.30 2.62
2522 2740 9.258629 AGGAGATATTGGAACATCAATTTGAAA 57.741 29.630 2.68 0.00 39.30 2.69
2523 2741 8.689061 CAGGAGATATTGGAACATCAATTTGAA 58.311 33.333 2.68 0.00 39.30 2.69
2524 2742 7.201848 GCAGGAGATATTGGAACATCAATTTGA 60.202 37.037 0.75 0.75 39.30 2.69
2525 2743 6.921857 GCAGGAGATATTGGAACATCAATTTG 59.078 38.462 0.00 0.00 39.30 2.32
2526 2744 6.837568 AGCAGGAGATATTGGAACATCAATTT 59.162 34.615 0.00 0.00 39.30 1.82
2527 2745 6.371278 AGCAGGAGATATTGGAACATCAATT 58.629 36.000 0.00 0.00 39.30 2.32
2528 2746 5.950023 AGCAGGAGATATTGGAACATCAAT 58.050 37.500 0.00 0.00 39.30 2.57
2529 2747 5.371526 GAGCAGGAGATATTGGAACATCAA 58.628 41.667 0.00 0.00 39.30 2.57
2530 2748 4.202398 GGAGCAGGAGATATTGGAACATCA 60.202 45.833 0.00 0.00 39.30 3.07
2531 2749 4.322567 GGAGCAGGAGATATTGGAACATC 58.677 47.826 0.00 0.00 39.30 3.06
2532 2750 3.073650 GGGAGCAGGAGATATTGGAACAT 59.926 47.826 0.00 0.00 39.30 2.71
2533 2751 2.439507 GGGAGCAGGAGATATTGGAACA 59.560 50.000 0.00 0.00 0.00 3.18
2534 2752 2.548920 CGGGAGCAGGAGATATTGGAAC 60.549 54.545 0.00 0.00 0.00 3.62
2535 2753 1.694150 CGGGAGCAGGAGATATTGGAA 59.306 52.381 0.00 0.00 0.00 3.53
2536 2754 1.342074 CGGGAGCAGGAGATATTGGA 58.658 55.000 0.00 0.00 0.00 3.53
2537 2755 0.322975 CCGGGAGCAGGAGATATTGG 59.677 60.000 0.00 0.00 0.00 3.16
2538 2756 0.322975 CCCGGGAGCAGGAGATATTG 59.677 60.000 18.48 0.00 0.00 1.90
2539 2757 0.104934 ACCCGGGAGCAGGAGATATT 60.105 55.000 32.02 0.00 0.00 1.28
2540 2758 0.104934 AACCCGGGAGCAGGAGATAT 60.105 55.000 32.02 0.00 0.00 1.63
2541 2759 0.559205 TAACCCGGGAGCAGGAGATA 59.441 55.000 32.02 2.67 0.00 1.98
2542 2760 0.104934 ATAACCCGGGAGCAGGAGAT 60.105 55.000 32.02 0.00 0.00 2.75
2543 2761 1.048724 CATAACCCGGGAGCAGGAGA 61.049 60.000 32.02 2.45 0.00 3.71
2544 2762 1.338136 ACATAACCCGGGAGCAGGAG 61.338 60.000 32.02 12.31 0.00 3.69
2545 2763 1.306654 ACATAACCCGGGAGCAGGA 60.307 57.895 32.02 5.26 0.00 3.86
2546 2764 1.153168 CACATAACCCGGGAGCAGG 60.153 63.158 32.02 15.59 0.00 4.85
2547 2765 0.462047 GACACATAACCCGGGAGCAG 60.462 60.000 32.02 16.71 0.00 4.24
2548 2766 1.600107 GACACATAACCCGGGAGCA 59.400 57.895 32.02 12.15 0.00 4.26
2549 2767 1.520787 CGACACATAACCCGGGAGC 60.521 63.158 32.02 5.56 0.00 4.70
2550 2768 1.520787 GCGACACATAACCCGGGAG 60.521 63.158 32.02 16.32 0.00 4.30
2551 2769 1.985662 AGCGACACATAACCCGGGA 60.986 57.895 32.02 5.69 0.00 5.14
2552 2770 1.813753 CAGCGACACATAACCCGGG 60.814 63.158 22.25 22.25 0.00 5.73
2553 2771 0.672401 AACAGCGACACATAACCCGG 60.672 55.000 0.00 0.00 0.00 5.73
2554 2772 0.442310 CAACAGCGACACATAACCCG 59.558 55.000 0.00 0.00 0.00 5.28
2555 2773 0.168128 GCAACAGCGACACATAACCC 59.832 55.000 0.00 0.00 0.00 4.11
2556 2774 1.128692 GAGCAACAGCGACACATAACC 59.871 52.381 0.00 0.00 0.00 2.85
2557 2775 2.069273 AGAGCAACAGCGACACATAAC 58.931 47.619 0.00 0.00 0.00 1.89
2558 2776 2.455674 AGAGCAACAGCGACACATAA 57.544 45.000 0.00 0.00 0.00 1.90
2559 2777 2.337583 GAAGAGCAACAGCGACACATA 58.662 47.619 0.00 0.00 0.00 2.29
2560 2778 1.151668 GAAGAGCAACAGCGACACAT 58.848 50.000 0.00 0.00 0.00 3.21
2561 2779 0.880278 GGAAGAGCAACAGCGACACA 60.880 55.000 0.00 0.00 0.00 3.72
2562 2780 1.569479 GGGAAGAGCAACAGCGACAC 61.569 60.000 0.00 0.00 0.00 3.67
2563 2781 1.301716 GGGAAGAGCAACAGCGACA 60.302 57.895 0.00 0.00 0.00 4.35
2564 2782 1.004440 AGGGAAGAGCAACAGCGAC 60.004 57.895 0.00 0.00 0.00 5.19
2565 2783 1.004560 CAGGGAAGAGCAACAGCGA 60.005 57.895 0.00 0.00 0.00 4.93
2566 2784 2.037136 CCAGGGAAGAGCAACAGCG 61.037 63.158 0.00 0.00 0.00 5.18
2567 2785 2.338785 GCCAGGGAAGAGCAACAGC 61.339 63.158 0.00 0.00 0.00 4.40
2568 2786 0.323178 ATGCCAGGGAAGAGCAACAG 60.323 55.000 0.00 0.00 40.46 3.16
2569 2787 0.112995 AATGCCAGGGAAGAGCAACA 59.887 50.000 0.00 0.00 40.46 3.33
2570 2788 0.529378 CAATGCCAGGGAAGAGCAAC 59.471 55.000 0.00 0.00 40.46 4.17
2571 2789 0.405198 TCAATGCCAGGGAAGAGCAA 59.595 50.000 0.00 0.00 40.46 3.91
2572 2790 0.322816 GTCAATGCCAGGGAAGAGCA 60.323 55.000 0.00 0.00 41.50 4.26
2573 2791 0.322816 TGTCAATGCCAGGGAAGAGC 60.323 55.000 0.00 0.00 0.00 4.09
2574 2792 1.280133 TCTGTCAATGCCAGGGAAGAG 59.720 52.381 0.00 0.00 0.00 2.85
2575 2793 1.361204 TCTGTCAATGCCAGGGAAGA 58.639 50.000 0.00 0.00 0.00 2.87
2576 2794 2.431954 ATCTGTCAATGCCAGGGAAG 57.568 50.000 0.00 0.00 0.00 3.46
2577 2795 2.621407 GGAATCTGTCAATGCCAGGGAA 60.621 50.000 0.00 0.00 0.00 3.97
2578 2796 1.064463 GGAATCTGTCAATGCCAGGGA 60.064 52.381 0.00 0.00 0.00 4.20
2579 2797 1.064166 AGGAATCTGTCAATGCCAGGG 60.064 52.381 0.00 0.00 0.00 4.45
2580 2798 2.431954 AGGAATCTGTCAATGCCAGG 57.568 50.000 0.00 0.00 0.00 4.45
2581 2799 3.118112 ACCTAGGAATCTGTCAATGCCAG 60.118 47.826 17.98 0.00 0.00 4.85
2582 2800 2.846206 ACCTAGGAATCTGTCAATGCCA 59.154 45.455 17.98 0.00 0.00 4.92
2583 2801 3.567478 ACCTAGGAATCTGTCAATGCC 57.433 47.619 17.98 0.00 0.00 4.40
2584 2802 5.023533 TGTACCTAGGAATCTGTCAATGC 57.976 43.478 17.98 0.00 0.00 3.56
2585 2803 7.050377 ACATTGTACCTAGGAATCTGTCAATG 58.950 38.462 17.98 21.55 42.57 2.82
2586 2804 7.092891 TGACATTGTACCTAGGAATCTGTCAAT 60.093 37.037 23.62 15.96 37.95 2.57
2587 2805 6.212589 TGACATTGTACCTAGGAATCTGTCAA 59.787 38.462 23.62 14.93 37.95 3.18
2588 2806 5.719563 TGACATTGTACCTAGGAATCTGTCA 59.280 40.000 17.98 21.26 38.41 3.58
2589 2807 6.096987 TCTGACATTGTACCTAGGAATCTGTC 59.903 42.308 17.98 19.20 0.00 3.51
2590 2808 5.958380 TCTGACATTGTACCTAGGAATCTGT 59.042 40.000 17.98 11.68 0.00 3.41
2591 2809 6.471233 TCTGACATTGTACCTAGGAATCTG 57.529 41.667 17.98 8.51 0.00 2.90
2592 2810 5.069781 GCTCTGACATTGTACCTAGGAATCT 59.930 44.000 17.98 0.00 0.00 2.40
2593 2811 5.069781 AGCTCTGACATTGTACCTAGGAATC 59.930 44.000 17.98 5.74 0.00 2.52
2594 2812 4.965532 AGCTCTGACATTGTACCTAGGAAT 59.034 41.667 17.98 1.51 0.00 3.01
2595 2813 4.353777 AGCTCTGACATTGTACCTAGGAA 58.646 43.478 17.98 0.00 0.00 3.36
2596 2814 3.982516 AGCTCTGACATTGTACCTAGGA 58.017 45.455 17.98 0.00 0.00 2.94
2597 2815 5.303078 ACATAGCTCTGACATTGTACCTAGG 59.697 44.000 7.41 7.41 0.00 3.02
2598 2816 6.398234 ACATAGCTCTGACATTGTACCTAG 57.602 41.667 6.05 0.00 0.00 3.02
2599 2817 6.379988 TCAACATAGCTCTGACATTGTACCTA 59.620 38.462 6.05 0.00 0.00 3.08
2600 2818 5.187772 TCAACATAGCTCTGACATTGTACCT 59.812 40.000 6.05 0.00 0.00 3.08
2601 2819 5.419542 TCAACATAGCTCTGACATTGTACC 58.580 41.667 6.05 0.00 0.00 3.34
2602 2820 5.521735 CCTCAACATAGCTCTGACATTGTAC 59.478 44.000 6.05 0.00 0.00 2.90
2603 2821 5.664457 CCTCAACATAGCTCTGACATTGTA 58.336 41.667 6.05 0.00 0.00 2.41
2604 2822 4.511527 CCTCAACATAGCTCTGACATTGT 58.488 43.478 6.05 0.00 0.00 2.71
2605 2823 3.311871 GCCTCAACATAGCTCTGACATTG 59.688 47.826 6.05 0.73 0.00 2.82
2606 2824 3.539604 GCCTCAACATAGCTCTGACATT 58.460 45.455 6.05 0.00 0.00 2.71
2607 2825 2.158842 GGCCTCAACATAGCTCTGACAT 60.159 50.000 6.05 0.00 0.00 3.06
2608 2826 1.208052 GGCCTCAACATAGCTCTGACA 59.792 52.381 6.05 0.00 0.00 3.58
2609 2827 1.208052 TGGCCTCAACATAGCTCTGAC 59.792 52.381 3.32 0.00 0.00 3.51
2610 2828 1.483827 CTGGCCTCAACATAGCTCTGA 59.516 52.381 3.32 0.00 0.00 3.27
2611 2829 1.474677 CCTGGCCTCAACATAGCTCTG 60.475 57.143 3.32 0.00 0.00 3.35
2612 2830 0.835941 CCTGGCCTCAACATAGCTCT 59.164 55.000 3.32 0.00 0.00 4.09
2613 2831 0.179034 CCCTGGCCTCAACATAGCTC 60.179 60.000 3.32 0.00 0.00 4.09
2614 2832 1.639635 CCCCTGGCCTCAACATAGCT 61.640 60.000 3.32 0.00 0.00 3.32
2615 2833 1.152881 CCCCTGGCCTCAACATAGC 60.153 63.158 3.32 0.00 0.00 2.97
2616 2834 1.533711 CCCCCTGGCCTCAACATAG 59.466 63.158 3.32 0.00 0.00 2.23
2617 2835 3.754043 CCCCCTGGCCTCAACATA 58.246 61.111 3.32 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.