Multiple sequence alignment - TraesCS7A01G056500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G056500 chr7A 100.000 2556 0 0 1 2556 27201680 27204235 0.000000e+00 4721.0
1 TraesCS7A01G056500 chr7A 100.000 44 0 0 643 686 27202280 27202323 5.860000e-12 82.4
2 TraesCS7A01G056500 chr7A 100.000 44 0 0 601 644 27202322 27202365 5.860000e-12 82.4
3 TraesCS7A01G056500 chr4A 81.347 1351 139 57 660 1963 710795903 710797187 0.000000e+00 994.0
4 TraesCS7A01G056500 chr4A 80.119 337 39 20 1250 1566 2905676 2905348 2.560000e-55 226.0
5 TraesCS7A01G056500 chr4A 89.922 129 10 2 997 1122 2905972 2905844 2.030000e-36 163.0
6 TraesCS7A01G056500 chr7D 87.674 860 71 21 702 1541 26773096 26773940 0.000000e+00 968.0
7 TraesCS7A01G056500 chr7D 87.316 544 61 8 1 543 112011990 112012526 1.300000e-172 616.0
8 TraesCS7A01G056500 chr7D 81.126 604 84 15 1 596 491883960 491883379 8.340000e-125 457.0
9 TraesCS7A01G056500 chr7D 90.506 158 7 3 1961 2118 26775633 26775782 4.310000e-48 202.0
10 TraesCS7A01G056500 chr7D 78.378 259 33 14 1520 1757 26780664 26780920 2.050000e-31 147.0
11 TraesCS7A01G056500 chr7D 79.424 243 16 18 1863 2081 26781164 26781396 9.530000e-30 141.0
12 TraesCS7A01G056500 chr3B 85.882 595 75 3 1 595 489699413 489698828 2.160000e-175 625.0
13 TraesCS7A01G056500 chr1A 86.323 563 68 7 1 557 380576494 380577053 2.810000e-169 604.0
14 TraesCS7A01G056500 chr1A 83.737 578 82 11 1 576 464913702 464913135 1.040000e-148 536.0
15 TraesCS7A01G056500 chr3A 84.896 576 74 6 2 577 498788889 498788327 1.030000e-158 569.0
16 TraesCS7A01G056500 chr7B 85.656 488 60 8 1 488 241523719 241523242 2.930000e-139 505.0
17 TraesCS7A01G056500 chr5B 83.925 535 71 13 1 533 674342902 674342381 4.910000e-137 497.0
18 TraesCS7A01G056500 chr1B 80.196 611 101 11 1 607 418161605 418162199 8.390000e-120 440.0
19 TraesCS7A01G056500 chr4B 77.815 595 85 29 997 1554 588223424 588224008 8.820000e-85 324.0
20 TraesCS7A01G056500 chr4D 79.000 400 46 18 1191 1556 468624927 468625322 3.290000e-59 239.0
21 TraesCS7A01G056500 chr4D 90.984 122 9 2 997 1117 468624694 468624814 2.030000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G056500 chr7A 27201680 27204235 2555 False 1628.6 4721 100.000 1 2556 3 chr7A.!!$F1 2555
1 TraesCS7A01G056500 chr4A 710795903 710797187 1284 False 994.0 994 81.347 660 1963 1 chr4A.!!$F1 1303
2 TraesCS7A01G056500 chr7D 112011990 112012526 536 False 616.0 616 87.316 1 543 1 chr7D.!!$F1 542
3 TraesCS7A01G056500 chr7D 26773096 26775782 2686 False 585.0 968 89.090 702 2118 2 chr7D.!!$F2 1416
4 TraesCS7A01G056500 chr7D 491883379 491883960 581 True 457.0 457 81.126 1 596 1 chr7D.!!$R1 595
5 TraesCS7A01G056500 chr3B 489698828 489699413 585 True 625.0 625 85.882 1 595 1 chr3B.!!$R1 594
6 TraesCS7A01G056500 chr1A 380576494 380577053 559 False 604.0 604 86.323 1 557 1 chr1A.!!$F1 556
7 TraesCS7A01G056500 chr1A 464913135 464913702 567 True 536.0 536 83.737 1 576 1 chr1A.!!$R1 575
8 TraesCS7A01G056500 chr3A 498788327 498788889 562 True 569.0 569 84.896 2 577 1 chr3A.!!$R1 575
9 TraesCS7A01G056500 chr5B 674342381 674342902 521 True 497.0 497 83.925 1 533 1 chr5B.!!$R1 532
10 TraesCS7A01G056500 chr1B 418161605 418162199 594 False 440.0 440 80.196 1 607 1 chr1B.!!$F1 606
11 TraesCS7A01G056500 chr4B 588223424 588224008 584 False 324.0 324 77.815 997 1554 1 chr4B.!!$F1 557
12 TraesCS7A01G056500 chr4D 468624694 468625322 628 False 201.0 239 84.992 997 1556 2 chr4D.!!$F1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 207 0.180642 CACATCAGCAGCAGAGGGAT 59.819 55.0 4.37 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2067 3624 0.034616 AGGCTGAACTGCTGACACTC 59.965 55.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 4.181309 ACAAAGCGTGGAAGAACAAAAA 57.819 36.364 0.00 0.00 0.00 1.94
75 76 3.692791 AGCGTGGAAGAACAAAAAGTC 57.307 42.857 0.00 0.00 0.00 3.01
76 77 3.013921 AGCGTGGAAGAACAAAAAGTCA 58.986 40.909 0.00 0.00 0.00 3.41
103 104 2.590821 GCTCAGGCAATGTGGGATAAT 58.409 47.619 0.00 0.00 38.54 1.28
118 119 5.598830 GTGGGATAATAGAGGTCAGACAAGA 59.401 44.000 2.17 0.00 0.00 3.02
129 130 4.019501 AGGTCAGACAAGAATCAGAAGCAT 60.020 41.667 2.17 0.00 0.00 3.79
174 175 1.963338 GGCAGCAACAGAAGCGAGT 60.963 57.895 0.00 0.00 37.01 4.18
204 205 2.113433 GCACATCAGCAGCAGAGGG 61.113 63.158 4.37 0.00 0.00 4.30
205 206 1.600638 CACATCAGCAGCAGAGGGA 59.399 57.895 4.37 0.00 0.00 4.20
206 207 0.180642 CACATCAGCAGCAGAGGGAT 59.819 55.000 4.37 0.00 0.00 3.85
207 208 1.415289 CACATCAGCAGCAGAGGGATA 59.585 52.381 4.37 0.00 0.00 2.59
208 209 1.693062 ACATCAGCAGCAGAGGGATAG 59.307 52.381 4.37 0.00 0.00 2.08
209 210 1.002201 CATCAGCAGCAGAGGGATAGG 59.998 57.143 0.00 0.00 0.00 2.57
215 216 2.956132 CAGCAGAGGGATAGGAAGAGA 58.044 52.381 0.00 0.00 0.00 3.10
220 239 4.592778 GCAGAGGGATAGGAAGAGAAAGAT 59.407 45.833 0.00 0.00 0.00 2.40
227 246 7.349330 AGGGATAGGAAGAGAAAGATGATGAAA 59.651 37.037 0.00 0.00 0.00 2.69
229 248 9.218440 GGATAGGAAGAGAAAGATGATGAAATC 57.782 37.037 0.00 0.00 45.83 2.17
313 337 6.219473 CACTGTCATTTGCTAGTAGATAGGG 58.781 44.000 0.00 0.00 31.55 3.53
362 393 2.945008 ACAAGACAATGTCCAGTGTGTG 59.055 45.455 10.12 5.97 39.96 3.82
364 395 4.126437 CAAGACAATGTCCAGTGTGTGTA 58.874 43.478 10.12 0.00 39.96 2.90
370 401 5.069914 ACAATGTCCAGTGTGTGTAGTAAGA 59.930 40.000 0.00 0.00 38.29 2.10
418 450 0.955905 TCTTTAGCCGTTTGCAACCC 59.044 50.000 0.00 0.00 44.83 4.11
472 508 1.658409 GCAACCAAACAGCGTGCTC 60.658 57.895 0.00 0.00 0.00 4.26
499 535 5.855045 AGTTGATTTCCTCGTACAGAAAGT 58.145 37.500 8.24 0.00 35.57 2.66
527 563 2.231964 CAGGCAACCAAACTACATGCAT 59.768 45.455 0.00 0.00 38.73 3.96
544 581 7.225784 ACATGCATATGTTGGTTTTTAGTCA 57.774 32.000 0.00 0.00 45.01 3.41
577 614 5.012046 TCAATCAGCCTCAACTAGAACAAGA 59.988 40.000 0.00 0.00 0.00 3.02
578 615 4.955811 TCAGCCTCAACTAGAACAAGAA 57.044 40.909 0.00 0.00 0.00 2.52
579 616 4.632153 TCAGCCTCAACTAGAACAAGAAC 58.368 43.478 0.00 0.00 0.00 3.01
580 617 4.100963 TCAGCCTCAACTAGAACAAGAACA 59.899 41.667 0.00 0.00 0.00 3.18
581 618 4.816385 CAGCCTCAACTAGAACAAGAACAA 59.184 41.667 0.00 0.00 0.00 2.83
585 622 6.146347 GCCTCAACTAGAACAAGAACAAGTAG 59.854 42.308 0.00 0.00 0.00 2.57
607 645 2.765122 CAAAATGCCGGTGAACCAAAT 58.235 42.857 1.90 0.00 35.14 2.32
608 646 3.862642 GCAAAATGCCGGTGAACCAAATA 60.863 43.478 1.90 0.00 37.42 1.40
609 647 3.586100 AAATGCCGGTGAACCAAATAC 57.414 42.857 1.90 0.00 35.14 1.89
610 648 1.091537 ATGCCGGTGAACCAAATACG 58.908 50.000 1.90 0.00 35.14 3.06
611 649 1.135939 GCCGGTGAACCAAATACGC 59.864 57.895 1.90 0.00 35.14 4.42
612 650 1.798087 CCGGTGAACCAAATACGCC 59.202 57.895 0.00 0.00 35.14 5.68
613 651 1.650314 CCGGTGAACCAAATACGCCC 61.650 60.000 0.00 0.00 35.14 6.13
614 652 1.650314 CGGTGAACCAAATACGCCCC 61.650 60.000 0.00 0.00 35.14 5.80
615 653 1.317431 GGTGAACCAAATACGCCCCC 61.317 60.000 0.00 0.00 35.64 5.40
616 654 1.377463 TGAACCAAATACGCCCCCG 60.377 57.895 0.00 0.00 41.14 5.73
641 679 3.909957 GTGTGGACACGTTTGGAAC 57.090 52.632 0.00 0.00 37.10 3.62
642 680 1.088306 GTGTGGACACGTTTGGAACA 58.912 50.000 0.00 0.00 37.10 3.18
643 681 1.469308 GTGTGGACACGTTTGGAACAA 59.531 47.619 0.00 0.00 39.67 2.83
644 682 2.729778 GTGTGGACACGTTTGGAACAAC 60.730 50.000 0.00 0.00 39.67 3.32
645 683 5.802815 GTGTGGACACGTTTGGAACAACC 62.803 52.174 0.00 0.00 39.67 3.77
655 693 1.249407 TGGAACAACCAAATACGCCC 58.751 50.000 0.00 0.00 46.75 6.13
656 694 0.528924 GGAACAACCAAATACGCCCC 59.471 55.000 0.00 0.00 38.79 5.80
657 695 0.528924 GAACAACCAAATACGCCCCC 59.471 55.000 0.00 0.00 0.00 5.40
658 696 1.245376 AACAACCAAATACGCCCCCG 61.245 55.000 0.00 0.00 41.14 5.73
731 769 3.379445 GTCGCCTTCCTCCGTCCA 61.379 66.667 0.00 0.00 0.00 4.02
735 773 1.153349 GCCTTCCTCCGTCCATCAC 60.153 63.158 0.00 0.00 0.00 3.06
817 859 3.316308 GGCTGGCACATAATCTAACTTGG 59.684 47.826 0.00 0.00 38.20 3.61
819 861 3.287222 TGGCACATAATCTAACTTGGCC 58.713 45.455 0.00 0.00 39.29 5.36
820 862 2.290641 GGCACATAATCTAACTTGGCCG 59.709 50.000 0.00 0.00 0.00 6.13
821 863 2.287009 GCACATAATCTAACTTGGCCGC 60.287 50.000 0.00 0.00 0.00 6.53
823 865 2.092646 ACATAATCTAACTTGGCCGCCA 60.093 45.455 8.43 8.43 0.00 5.69
824 866 2.032680 TAATCTAACTTGGCCGCCAC 57.967 50.000 13.00 0.00 30.78 5.01
825 867 0.328258 AATCTAACTTGGCCGCCACT 59.672 50.000 13.00 2.08 30.78 4.00
826 868 0.328258 ATCTAACTTGGCCGCCACTT 59.672 50.000 13.00 9.13 30.78 3.16
827 869 0.605319 TCTAACTTGGCCGCCACTTG 60.605 55.000 13.00 8.13 30.78 3.16
828 870 0.605319 CTAACTTGGCCGCCACTTGA 60.605 55.000 13.00 0.00 30.78 3.02
844 886 3.827898 GAGACTCGCCTGGGACGG 61.828 72.222 0.00 0.00 0.00 4.79
851 893 4.459089 GCCTGGGACGGCAGAGAC 62.459 72.222 0.00 0.00 44.81 3.36
886 938 3.009714 AACCGCTCCTCCCTTCCC 61.010 66.667 0.00 0.00 0.00 3.97
894 946 1.228920 TCCTCCCTTCCCCTGCTCTA 61.229 60.000 0.00 0.00 0.00 2.43
929 986 2.770130 GGCCCCAATCCAACCAGA 59.230 61.111 0.00 0.00 0.00 3.86
930 987 1.682344 GGCCCCAATCCAACCAGAC 60.682 63.158 0.00 0.00 0.00 3.51
931 988 1.682344 GCCCCAATCCAACCAGACC 60.682 63.158 0.00 0.00 0.00 3.85
932 989 1.000359 CCCCAATCCAACCAGACCC 60.000 63.158 0.00 0.00 0.00 4.46
933 990 1.509548 CCCCAATCCAACCAGACCCT 61.510 60.000 0.00 0.00 0.00 4.34
934 991 0.323725 CCCAATCCAACCAGACCCTG 60.324 60.000 0.00 0.00 0.00 4.45
935 992 0.967380 CCAATCCAACCAGACCCTGC 60.967 60.000 0.00 0.00 0.00 4.85
936 993 0.967380 CAATCCAACCAGACCCTGCC 60.967 60.000 0.00 0.00 0.00 4.85
937 994 2.484287 AATCCAACCAGACCCTGCCG 62.484 60.000 0.00 0.00 0.00 5.69
939 996 4.335647 CAACCAGACCCTGCCGCT 62.336 66.667 0.00 0.00 0.00 5.52
940 997 4.335647 AACCAGACCCTGCCGCTG 62.336 66.667 0.00 0.00 0.00 5.18
952 1009 4.504916 CCGCTGGCCTCAGTCGAG 62.505 72.222 3.32 0.00 42.78 4.04
960 1017 3.522731 CTCAGTCGAGGGAGGCGG 61.523 72.222 5.54 0.00 35.44 6.13
961 1018 3.997400 CTCAGTCGAGGGAGGCGGA 62.997 68.421 5.54 0.00 35.44 5.54
962 1019 3.522731 CAGTCGAGGGAGGCGGAG 61.523 72.222 0.00 0.00 0.00 4.63
980 1037 4.988598 CGGACGCAGCCAACCACT 62.989 66.667 0.00 0.00 0.00 4.00
1110 1205 3.062466 GCCAAACTCTTCGGCCCC 61.062 66.667 0.00 0.00 40.07 5.80
1160 1291 2.354729 CCCTTCACGGATTGGCCA 59.645 61.111 0.00 0.00 35.94 5.36
1459 1634 2.102084 CGAGCCTGAAGATGATGAGGAA 59.898 50.000 0.00 0.00 0.00 3.36
1465 1640 4.102838 CCTGAAGATGATGAGGAAGATGGT 59.897 45.833 0.00 0.00 0.00 3.55
1470 1645 3.204306 TGATGAGGAAGATGGTGATGC 57.796 47.619 0.00 0.00 0.00 3.91
1562 1746 4.187694 CAACCTCCTGCTCTGAGATTAAC 58.812 47.826 9.28 0.00 31.26 2.01
1563 1747 2.769095 ACCTCCTGCTCTGAGATTAACC 59.231 50.000 9.28 0.00 31.26 2.85
1564 1748 2.768527 CCTCCTGCTCTGAGATTAACCA 59.231 50.000 9.28 0.00 31.26 3.67
1566 1750 4.378774 CTCCTGCTCTGAGATTAACCATG 58.621 47.826 9.28 0.00 31.26 3.66
1567 1751 3.776969 TCCTGCTCTGAGATTAACCATGT 59.223 43.478 9.28 0.00 0.00 3.21
1568 1752 4.962362 TCCTGCTCTGAGATTAACCATGTA 59.038 41.667 9.28 0.00 0.00 2.29
1569 1753 5.604231 TCCTGCTCTGAGATTAACCATGTAT 59.396 40.000 9.28 0.00 0.00 2.29
1570 1754 5.931146 CCTGCTCTGAGATTAACCATGTATC 59.069 44.000 9.28 0.00 0.00 2.24
1571 1755 5.858381 TGCTCTGAGATTAACCATGTATCC 58.142 41.667 9.28 0.00 0.00 2.59
1572 1756 5.604231 TGCTCTGAGATTAACCATGTATCCT 59.396 40.000 9.28 0.00 0.00 3.24
1573 1757 6.100279 TGCTCTGAGATTAACCATGTATCCTT 59.900 38.462 9.28 0.00 0.00 3.36
1574 1758 6.426328 GCTCTGAGATTAACCATGTATCCTTG 59.574 42.308 9.28 0.00 0.00 3.61
1576 1760 7.861629 TCTGAGATTAACCATGTATCCTTGTT 58.138 34.615 0.00 0.00 0.00 2.83
1577 1761 8.988060 TCTGAGATTAACCATGTATCCTTGTTA 58.012 33.333 0.00 0.00 0.00 2.41
1578 1762 9.613428 CTGAGATTAACCATGTATCCTTGTTAA 57.387 33.333 4.42 4.42 0.00 2.01
1595 1780 7.559897 TCCTTGTTAAGTTTCAGTGATTTCCTT 59.440 33.333 0.00 0.00 0.00 3.36
1596 1781 7.862873 CCTTGTTAAGTTTCAGTGATTTCCTTC 59.137 37.037 0.00 0.00 0.00 3.46
1597 1782 8.519799 TTGTTAAGTTTCAGTGATTTCCTTCT 57.480 30.769 0.00 0.00 0.00 2.85
1598 1783 7.930217 TGTTAAGTTTCAGTGATTTCCTTCTG 58.070 34.615 0.00 0.00 0.00 3.02
1599 1784 7.556275 TGTTAAGTTTCAGTGATTTCCTTCTGT 59.444 33.333 0.00 0.00 0.00 3.41
1600 1785 6.382869 AAGTTTCAGTGATTTCCTTCTGTG 57.617 37.500 0.00 0.00 0.00 3.66
1633 1841 7.278646 GCTCTGAAATTGAAAATTAACCATCCC 59.721 37.037 0.00 0.00 0.00 3.85
1634 1842 8.200024 TCTGAAATTGAAAATTAACCATCCCA 57.800 30.769 0.00 0.00 0.00 4.37
1635 1843 8.824783 TCTGAAATTGAAAATTAACCATCCCAT 58.175 29.630 0.00 0.00 0.00 4.00
1637 1845 8.046107 TGAAATTGAAAATTAACCATCCCATCC 58.954 33.333 0.00 0.00 0.00 3.51
1638 1846 7.507797 AATTGAAAATTAACCATCCCATCCA 57.492 32.000 0.00 0.00 0.00 3.41
1639 1847 7.695074 ATTGAAAATTAACCATCCCATCCAT 57.305 32.000 0.00 0.00 0.00 3.41
1640 1848 6.729690 TGAAAATTAACCATCCCATCCATC 57.270 37.500 0.00 0.00 0.00 3.51
1641 1849 5.602145 TGAAAATTAACCATCCCATCCATCC 59.398 40.000 0.00 0.00 0.00 3.51
1642 1850 5.423266 AAATTAACCATCCCATCCATCCT 57.577 39.130 0.00 0.00 0.00 3.24
1643 1851 5.423266 AATTAACCATCCCATCCATCCTT 57.577 39.130 0.00 0.00 0.00 3.36
1644 1852 6.544327 AATTAACCATCCCATCCATCCTTA 57.456 37.500 0.00 0.00 0.00 2.69
1645 1853 3.884037 AACCATCCCATCCATCCTTAC 57.116 47.619 0.00 0.00 0.00 2.34
1648 1856 2.553904 CCATCCCATCCATCCTTACAGC 60.554 54.545 0.00 0.00 0.00 4.40
1668 1876 3.118112 AGCTTCAGTGATCCATAGTTGGG 60.118 47.826 0.00 0.00 43.81 4.12
1678 1886 1.453155 CATAGTTGGGTCACAGTGGC 58.547 55.000 0.00 0.00 0.00 5.01
1680 1888 0.396435 TAGTTGGGTCACAGTGGCTG 59.604 55.000 4.85 0.00 37.52 4.85
1725 1933 3.057104 TGCTTGATGTTCTGCATTGGAAG 60.057 43.478 0.00 0.00 38.06 3.46
1736 1944 1.001378 GCATTGGAAGCTCGTGTTGTT 60.001 47.619 0.00 0.00 0.00 2.83
1738 1946 1.745232 TTGGAAGCTCGTGTTGTTGT 58.255 45.000 0.00 0.00 0.00 3.32
1739 1947 2.605837 TGGAAGCTCGTGTTGTTGTA 57.394 45.000 0.00 0.00 0.00 2.41
1742 1950 3.244078 TGGAAGCTCGTGTTGTTGTAGAT 60.244 43.478 0.00 0.00 0.00 1.98
1743 1951 3.368236 GGAAGCTCGTGTTGTTGTAGATC 59.632 47.826 0.00 0.00 0.00 2.75
1746 1954 4.569943 AGCTCGTGTTGTTGTAGATCAAT 58.430 39.130 0.00 0.00 38.38 2.57
1757 1965 9.088512 GTTGTTGTAGATCAATAGACGAAATCT 57.911 33.333 0.00 0.00 41.95 2.40
1759 1967 7.222805 TGTTGTAGATCAATAGACGAAATCTGC 59.777 37.037 0.00 0.00 38.49 4.26
1760 1968 7.043961 TGTAGATCAATAGACGAAATCTGCT 57.956 36.000 0.00 0.00 38.49 4.24
1761 1969 7.492524 TGTAGATCAATAGACGAAATCTGCTT 58.507 34.615 0.00 0.00 38.49 3.91
1768 2002 3.679389 AGACGAAATCTGCTTGATTGGT 58.321 40.909 6.35 7.57 43.99 3.67
1803 2043 1.114627 ACCATCTCTGCACGCTATCA 58.885 50.000 0.00 0.00 0.00 2.15
1804 2044 1.690893 ACCATCTCTGCACGCTATCAT 59.309 47.619 0.00 0.00 0.00 2.45
1805 2045 2.288702 ACCATCTCTGCACGCTATCATC 60.289 50.000 0.00 0.00 0.00 2.92
1806 2046 2.029200 CCATCTCTGCACGCTATCATCT 60.029 50.000 0.00 0.00 0.00 2.90
1807 2047 3.192212 CCATCTCTGCACGCTATCATCTA 59.808 47.826 0.00 0.00 0.00 1.98
1808 2048 3.906014 TCTCTGCACGCTATCATCTAC 57.094 47.619 0.00 0.00 0.00 2.59
1845 2085 4.223700 TCATGACAGTGACTTGCCTCTTAT 59.776 41.667 0.00 0.00 0.00 1.73
1865 2106 8.958119 TCTTATAGTACAATTAGCCTGGTTTG 57.042 34.615 0.00 0.00 0.00 2.93
1877 2118 2.446435 CCTGGTTTGGATAACTGTGGG 58.554 52.381 0.00 0.00 0.00 4.61
1907 2963 5.122396 AGTCGTGTTGAATATGGAAAGCTTC 59.878 40.000 0.00 0.00 0.00 3.86
1921 3450 3.721793 GCTTCTCTAGCCATGGCAT 57.278 52.632 37.18 23.86 44.48 4.40
1937 3466 3.040477 TGGCATAGTGATCCATGACAGA 58.960 45.455 0.00 0.00 35.23 3.41
1939 3468 4.001652 GGCATAGTGATCCATGACAGATG 58.998 47.826 0.00 0.66 30.05 2.90
1958 3487 3.111853 TGACTGACTGCGACATTTCTT 57.888 42.857 0.00 0.00 0.00 2.52
1982 3539 3.096092 GGTTGGAATTGGTGGCTAATCA 58.904 45.455 0.00 0.00 0.00 2.57
1983 3540 3.513515 GGTTGGAATTGGTGGCTAATCAA 59.486 43.478 0.00 0.00 0.00 2.57
1984 3541 4.494484 GTTGGAATTGGTGGCTAATCAAC 58.506 43.478 0.00 0.00 0.00 3.18
1985 3542 4.046286 TGGAATTGGTGGCTAATCAACT 57.954 40.909 0.00 0.00 0.00 3.16
1986 3543 5.186256 TGGAATTGGTGGCTAATCAACTA 57.814 39.130 0.00 0.00 0.00 2.24
2029 3586 0.807496 GGTCTTTCAGCTGATGGTGC 59.193 55.000 19.04 7.21 41.10 5.01
2059 3616 1.614317 GGTCACCTGGTTGCAGCTTAT 60.614 52.381 0.00 0.00 0.00 1.73
2060 3617 2.355716 GGTCACCTGGTTGCAGCTTATA 60.356 50.000 0.00 0.00 0.00 0.98
2061 3618 3.545703 GTCACCTGGTTGCAGCTTATAT 58.454 45.455 0.00 0.00 0.00 0.86
2062 3619 4.444306 GGTCACCTGGTTGCAGCTTATATA 60.444 45.833 0.00 0.00 0.00 0.86
2067 3624 5.532406 ACCTGGTTGCAGCTTATATATGTTG 59.468 40.000 0.00 7.77 0.00 3.33
2080 3637 7.225538 GCTTATATATGTTGAGTGTCAGCAGTT 59.774 37.037 0.00 0.00 40.81 3.16
2081 3638 8.648557 TTATATATGTTGAGTGTCAGCAGTTC 57.351 34.615 0.00 0.00 40.81 3.01
2097 3654 1.203100 AGTTCAGCCTTCCTTTGCCAT 60.203 47.619 0.00 0.00 0.00 4.40
2101 3658 1.345415 CAGCCTTCCTTTGCCATGTTT 59.655 47.619 0.00 0.00 0.00 2.83
2118 3675 9.851686 TGCCATGTTTATTAGATGTCTTTATCT 57.148 29.630 0.00 0.00 40.39 1.98
2123 3680 8.998814 TGTTTATTAGATGTCTTTATCTCCCCA 58.001 33.333 0.00 0.00 38.35 4.96
2124 3681 9.495572 GTTTATTAGATGTCTTTATCTCCCCAG 57.504 37.037 0.00 0.00 38.35 4.45
2125 3682 8.798975 TTATTAGATGTCTTTATCTCCCCAGT 57.201 34.615 0.00 0.00 38.35 4.00
2126 3683 7.698163 ATTAGATGTCTTTATCTCCCCAGTT 57.302 36.000 0.00 0.00 38.35 3.16
2127 3684 7.510675 TTAGATGTCTTTATCTCCCCAGTTT 57.489 36.000 0.00 0.00 38.35 2.66
2128 3685 5.749462 AGATGTCTTTATCTCCCCAGTTTG 58.251 41.667 0.00 0.00 31.97 2.93
2129 3686 4.993705 TGTCTTTATCTCCCCAGTTTGT 57.006 40.909 0.00 0.00 0.00 2.83
2130 3687 4.651778 TGTCTTTATCTCCCCAGTTTGTG 58.348 43.478 0.00 0.00 0.00 3.33
2131 3688 4.104102 TGTCTTTATCTCCCCAGTTTGTGT 59.896 41.667 0.00 0.00 0.00 3.72
2132 3689 4.695928 GTCTTTATCTCCCCAGTTTGTGTC 59.304 45.833 0.00 0.00 0.00 3.67
2133 3690 3.713826 TTATCTCCCCAGTTTGTGTCC 57.286 47.619 0.00 0.00 0.00 4.02
2134 3691 0.324943 ATCTCCCCAGTTTGTGTCCG 59.675 55.000 0.00 0.00 0.00 4.79
2135 3692 1.302511 CTCCCCAGTTTGTGTCCGG 60.303 63.158 0.00 0.00 0.00 5.14
2136 3693 2.052047 CTCCCCAGTTTGTGTCCGGT 62.052 60.000 0.00 0.00 0.00 5.28
2137 3694 1.896660 CCCCAGTTTGTGTCCGGTG 60.897 63.158 0.00 0.00 0.00 4.94
2138 3695 1.153046 CCCAGTTTGTGTCCGGTGT 60.153 57.895 0.00 0.00 0.00 4.16
2139 3696 0.107081 CCCAGTTTGTGTCCGGTGTA 59.893 55.000 0.00 0.00 0.00 2.90
2140 3697 1.475392 CCCAGTTTGTGTCCGGTGTAA 60.475 52.381 0.00 0.00 0.00 2.41
2141 3698 2.500229 CCAGTTTGTGTCCGGTGTAAT 58.500 47.619 0.00 0.00 0.00 1.89
2142 3699 2.482721 CCAGTTTGTGTCCGGTGTAATC 59.517 50.000 0.00 0.00 0.00 1.75
2143 3700 3.399330 CAGTTTGTGTCCGGTGTAATCT 58.601 45.455 0.00 0.00 0.00 2.40
2144 3701 3.186409 CAGTTTGTGTCCGGTGTAATCTG 59.814 47.826 0.00 4.56 0.00 2.90
2145 3702 3.135994 GTTTGTGTCCGGTGTAATCTGT 58.864 45.455 0.00 0.00 0.00 3.41
2146 3703 2.448926 TGTGTCCGGTGTAATCTGTG 57.551 50.000 0.00 0.00 0.00 3.66
2147 3704 1.964933 TGTGTCCGGTGTAATCTGTGA 59.035 47.619 0.00 0.00 0.00 3.58
2148 3705 2.029380 TGTGTCCGGTGTAATCTGTGAG 60.029 50.000 0.00 0.00 0.00 3.51
2149 3706 1.548719 TGTCCGGTGTAATCTGTGAGG 59.451 52.381 0.00 0.00 0.00 3.86
2150 3707 1.134788 GTCCGGTGTAATCTGTGAGGG 60.135 57.143 0.00 0.00 0.00 4.30
2151 3708 0.462047 CCGGTGTAATCTGTGAGGGC 60.462 60.000 0.00 0.00 0.00 5.19
2152 3709 0.537188 CGGTGTAATCTGTGAGGGCT 59.463 55.000 0.00 0.00 0.00 5.19
2153 3710 1.066143 CGGTGTAATCTGTGAGGGCTT 60.066 52.381 0.00 0.00 0.00 4.35
2154 3711 2.633488 GGTGTAATCTGTGAGGGCTTC 58.367 52.381 0.00 0.00 0.00 3.86
2155 3712 2.633488 GTGTAATCTGTGAGGGCTTCC 58.367 52.381 0.00 0.00 0.00 3.46
2156 3713 2.027192 GTGTAATCTGTGAGGGCTTCCA 60.027 50.000 0.00 0.00 0.00 3.53
2157 3714 2.237143 TGTAATCTGTGAGGGCTTCCAG 59.763 50.000 8.23 8.23 0.00 3.86
2158 3715 1.366319 AATCTGTGAGGGCTTCCAGT 58.634 50.000 12.43 1.88 0.00 4.00
2159 3716 0.908198 ATCTGTGAGGGCTTCCAGTC 59.092 55.000 12.43 0.00 0.00 3.51
2160 3717 0.178921 TCTGTGAGGGCTTCCAGTCT 60.179 55.000 12.43 0.00 0.00 3.24
2161 3718 0.036577 CTGTGAGGGCTTCCAGTCTG 60.037 60.000 0.00 0.00 0.00 3.51
2162 3719 0.471780 TGTGAGGGCTTCCAGTCTGA 60.472 55.000 0.00 0.00 0.00 3.27
2163 3720 0.248843 GTGAGGGCTTCCAGTCTGAG 59.751 60.000 0.00 0.00 0.00 3.35
2164 3721 0.115152 TGAGGGCTTCCAGTCTGAGA 59.885 55.000 0.00 0.00 0.00 3.27
2165 3722 0.534873 GAGGGCTTCCAGTCTGAGAC 59.465 60.000 3.98 3.98 0.00 3.36
2166 3723 0.116143 AGGGCTTCCAGTCTGAGACT 59.884 55.000 9.77 9.77 44.44 3.24
2176 3733 3.237268 AGTCTGAGACTGACCTCAAGT 57.763 47.619 15.39 0.00 41.76 3.16
2177 3734 3.571590 AGTCTGAGACTGACCTCAAGTT 58.428 45.455 15.39 0.00 41.76 2.66
2178 3735 4.730966 AGTCTGAGACTGACCTCAAGTTA 58.269 43.478 15.39 0.00 41.76 2.24
2179 3736 5.329399 AGTCTGAGACTGACCTCAAGTTAT 58.671 41.667 15.39 0.00 41.76 1.89
2180 3737 5.184864 AGTCTGAGACTGACCTCAAGTTATG 59.815 44.000 15.39 0.00 41.76 1.90
2181 3738 5.047660 GTCTGAGACTGACCTCAAGTTATGT 60.048 44.000 5.12 0.00 42.05 2.29
2182 3739 6.151312 GTCTGAGACTGACCTCAAGTTATGTA 59.849 42.308 5.12 0.00 42.05 2.29
2183 3740 6.719829 TCTGAGACTGACCTCAAGTTATGTAA 59.280 38.462 0.00 0.00 42.05 2.41
2184 3741 7.232737 TCTGAGACTGACCTCAAGTTATGTAAA 59.767 37.037 0.00 0.00 42.05 2.01
2185 3742 7.907389 TGAGACTGACCTCAAGTTATGTAAAT 58.093 34.615 0.00 0.00 39.96 1.40
2186 3743 7.819415 TGAGACTGACCTCAAGTTATGTAAATG 59.181 37.037 0.00 0.00 39.96 2.32
2187 3744 7.907389 AGACTGACCTCAAGTTATGTAAATGA 58.093 34.615 0.00 0.00 0.00 2.57
2188 3745 8.037758 AGACTGACCTCAAGTTATGTAAATGAG 58.962 37.037 8.67 8.67 0.00 2.90
2189 3746 7.106239 ACTGACCTCAAGTTATGTAAATGAGG 58.894 38.462 22.11 22.11 44.90 3.86
2190 3747 6.414732 TGACCTCAAGTTATGTAAATGAGGG 58.585 40.000 24.78 14.91 44.00 4.30
2191 3748 5.193679 ACCTCAAGTTATGTAAATGAGGGC 58.806 41.667 24.78 0.00 44.00 5.19
2192 3749 5.192927 CCTCAAGTTATGTAAATGAGGGCA 58.807 41.667 18.90 0.00 38.15 5.36
2193 3750 5.829924 CCTCAAGTTATGTAAATGAGGGCAT 59.170 40.000 18.90 0.00 38.15 4.40
2194 3751 6.016777 CCTCAAGTTATGTAAATGAGGGCATC 60.017 42.308 18.90 0.00 38.15 3.91
2195 3752 6.422333 TCAAGTTATGTAAATGAGGGCATCA 58.578 36.000 3.57 3.57 43.70 3.07
2203 3760 1.671979 ATGAGGGCATCATTGTCGTG 58.328 50.000 9.15 0.00 46.97 4.35
2204 3761 1.026182 TGAGGGCATCATTGTCGTGC 61.026 55.000 0.00 0.00 38.12 5.34
2205 3762 0.745845 GAGGGCATCATTGTCGTGCT 60.746 55.000 0.00 0.00 38.83 4.40
2206 3763 0.322816 AGGGCATCATTGTCGTGCTT 60.323 50.000 9.85 0.42 38.83 3.91
2207 3764 0.099436 GGGCATCATTGTCGTGCTTC 59.901 55.000 9.85 2.70 38.83 3.86
2208 3765 1.089920 GGCATCATTGTCGTGCTTCT 58.910 50.000 9.85 0.00 38.83 2.85
2209 3766 1.063174 GGCATCATTGTCGTGCTTCTC 59.937 52.381 9.85 0.00 38.83 2.87
2210 3767 1.063174 GCATCATTGTCGTGCTTCTCC 59.937 52.381 0.00 0.00 36.02 3.71
2211 3768 2.349590 CATCATTGTCGTGCTTCTCCA 58.650 47.619 0.00 0.00 0.00 3.86
2212 3769 2.084610 TCATTGTCGTGCTTCTCCAG 57.915 50.000 0.00 0.00 0.00 3.86
2213 3770 1.618343 TCATTGTCGTGCTTCTCCAGA 59.382 47.619 0.00 0.00 0.00 3.86
2214 3771 2.234661 TCATTGTCGTGCTTCTCCAGAT 59.765 45.455 0.00 0.00 0.00 2.90
2215 3772 3.447229 TCATTGTCGTGCTTCTCCAGATA 59.553 43.478 0.00 0.00 0.00 1.98
2216 3773 4.100035 TCATTGTCGTGCTTCTCCAGATAT 59.900 41.667 0.00 0.00 0.00 1.63
2217 3774 3.717400 TGTCGTGCTTCTCCAGATATC 57.283 47.619 0.00 0.00 0.00 1.63
2218 3775 2.033424 TGTCGTGCTTCTCCAGATATCG 59.967 50.000 0.00 0.00 0.00 2.92
2219 3776 2.033550 GTCGTGCTTCTCCAGATATCGT 59.966 50.000 0.00 0.00 0.00 3.73
2220 3777 2.290916 TCGTGCTTCTCCAGATATCGTC 59.709 50.000 0.00 0.00 0.00 4.20
2221 3778 2.605823 CGTGCTTCTCCAGATATCGTCC 60.606 54.545 0.00 0.00 0.00 4.79
2222 3779 2.625790 GTGCTTCTCCAGATATCGTCCT 59.374 50.000 0.00 0.00 0.00 3.85
2223 3780 2.887783 TGCTTCTCCAGATATCGTCCTC 59.112 50.000 0.00 0.00 0.00 3.71
2224 3781 2.230266 GCTTCTCCAGATATCGTCCTCC 59.770 54.545 0.00 0.00 0.00 4.30
2225 3782 3.761897 CTTCTCCAGATATCGTCCTCCT 58.238 50.000 0.00 0.00 0.00 3.69
2226 3783 3.426787 TCTCCAGATATCGTCCTCCTC 57.573 52.381 0.00 0.00 0.00 3.71
2227 3784 2.983192 TCTCCAGATATCGTCCTCCTCT 59.017 50.000 0.00 0.00 0.00 3.69
2228 3785 3.081061 CTCCAGATATCGTCCTCCTCTG 58.919 54.545 0.00 0.00 34.48 3.35
2229 3786 1.543802 CCAGATATCGTCCTCCTCTGC 59.456 57.143 0.00 0.00 33.58 4.26
2230 3787 1.543802 CAGATATCGTCCTCCTCTGCC 59.456 57.143 0.00 0.00 0.00 4.85
2231 3788 1.427368 AGATATCGTCCTCCTCTGCCT 59.573 52.381 0.00 0.00 0.00 4.75
2232 3789 1.816224 GATATCGTCCTCCTCTGCCTC 59.184 57.143 0.00 0.00 0.00 4.70
2233 3790 0.847373 TATCGTCCTCCTCTGCCTCT 59.153 55.000 0.00 0.00 0.00 3.69
2234 3791 0.847373 ATCGTCCTCCTCTGCCTCTA 59.153 55.000 0.00 0.00 0.00 2.43
2235 3792 0.847373 TCGTCCTCCTCTGCCTCTAT 59.153 55.000 0.00 0.00 0.00 1.98
2236 3793 1.202830 TCGTCCTCCTCTGCCTCTATC 60.203 57.143 0.00 0.00 0.00 2.08
2237 3794 1.477740 CGTCCTCCTCTGCCTCTATCA 60.478 57.143 0.00 0.00 0.00 2.15
2238 3795 1.960689 GTCCTCCTCTGCCTCTATCAC 59.039 57.143 0.00 0.00 0.00 3.06
2239 3796 1.133325 TCCTCCTCTGCCTCTATCACC 60.133 57.143 0.00 0.00 0.00 4.02
2240 3797 1.133199 CCTCCTCTGCCTCTATCACCT 60.133 57.143 0.00 0.00 0.00 4.00
2241 3798 2.238521 CTCCTCTGCCTCTATCACCTC 58.761 57.143 0.00 0.00 0.00 3.85
2242 3799 0.958091 CCTCTGCCTCTATCACCTCG 59.042 60.000 0.00 0.00 0.00 4.63
2243 3800 1.477740 CCTCTGCCTCTATCACCTCGA 60.478 57.143 0.00 0.00 0.00 4.04
2244 3801 2.302260 CTCTGCCTCTATCACCTCGAA 58.698 52.381 0.00 0.00 0.00 3.71
2245 3802 2.293122 CTCTGCCTCTATCACCTCGAAG 59.707 54.545 0.00 0.00 0.00 3.79
2246 3803 2.092375 TCTGCCTCTATCACCTCGAAGA 60.092 50.000 0.00 0.00 0.00 2.87
2259 3816 3.044305 GAAGAGGCGCACGTGCTT 61.044 61.111 35.27 23.49 39.32 3.91
2260 3817 3.016474 GAAGAGGCGCACGTGCTTC 62.016 63.158 35.27 26.75 40.93 3.86
2268 3825 3.036084 CACGTGCTTCGCCTCGTT 61.036 61.111 0.82 0.00 44.19 3.85
2269 3826 1.731613 CACGTGCTTCGCCTCGTTA 60.732 57.895 0.82 0.00 44.19 3.18
2270 3827 1.007038 ACGTGCTTCGCCTCGTTAA 60.007 52.632 0.00 0.00 44.19 2.01
2271 3828 1.280206 ACGTGCTTCGCCTCGTTAAC 61.280 55.000 0.00 0.00 44.19 2.01
2272 3829 1.414897 GTGCTTCGCCTCGTTAACG 59.585 57.895 21.85 21.85 41.45 3.18
2273 3830 2.377310 TGCTTCGCCTCGTTAACGC 61.377 57.895 22.96 8.45 39.60 4.84
2275 3832 2.785105 CTTCGCCTCGTTAACGCGG 61.785 63.158 28.31 28.31 46.15 6.46
2276 3833 3.266230 TTCGCCTCGTTAACGCGGA 62.266 57.895 34.66 19.99 46.30 5.54
2277 3834 3.245315 CGCCTCGTTAACGCGGAG 61.245 66.667 34.66 28.88 46.30 4.63
2290 3847 4.018609 CGGAGCTGCCAATACTCG 57.981 61.111 0.00 0.00 35.94 4.18
2291 3848 2.240500 CGGAGCTGCCAATACTCGC 61.241 63.158 0.00 0.00 35.94 5.03
2292 3849 2.240500 GGAGCTGCCAATACTCGCG 61.241 63.158 0.00 0.00 36.34 5.87
2293 3850 1.226974 GAGCTGCCAATACTCGCGA 60.227 57.895 9.26 9.26 0.00 5.87
2294 3851 0.598680 GAGCTGCCAATACTCGCGAT 60.599 55.000 10.36 2.40 0.00 4.58
2295 3852 0.877649 AGCTGCCAATACTCGCGATG 60.878 55.000 10.36 4.56 0.00 3.84
2296 3853 1.154205 GCTGCCAATACTCGCGATGT 61.154 55.000 10.36 12.79 0.00 3.06
2297 3854 0.855349 CTGCCAATACTCGCGATGTC 59.145 55.000 10.36 0.00 0.00 3.06
2298 3855 0.869880 TGCCAATACTCGCGATGTCG 60.870 55.000 10.36 0.00 43.27 4.35
2308 3865 2.961721 CGATGTCGCCCATGGACG 60.962 66.667 15.09 15.09 37.22 4.79
2309 3866 2.499205 GATGTCGCCCATGGACGA 59.501 61.111 20.02 20.02 37.22 4.20
2310 3867 1.592669 GATGTCGCCCATGGACGAG 60.593 63.158 24.36 4.27 39.30 4.18
2311 3868 3.740128 ATGTCGCCCATGGACGAGC 62.740 63.158 24.36 17.77 39.30 5.03
2312 3869 4.451150 GTCGCCCATGGACGAGCA 62.451 66.667 24.36 0.00 39.30 4.26
2313 3870 4.451150 TCGCCCATGGACGAGCAC 62.451 66.667 20.02 0.00 33.69 4.40
2314 3871 4.758251 CGCCCATGGACGAGCACA 62.758 66.667 16.30 0.00 0.00 4.57
2315 3872 3.127533 GCCCATGGACGAGCACAC 61.128 66.667 15.22 0.00 0.00 3.82
2316 3873 2.436646 CCCATGGACGAGCACACC 60.437 66.667 15.22 0.00 0.00 4.16
2317 3874 2.815211 CCATGGACGAGCACACCG 60.815 66.667 5.56 0.00 0.00 4.94
2318 3875 3.490759 CATGGACGAGCACACCGC 61.491 66.667 0.00 0.00 42.91 5.68
2319 3876 4.760047 ATGGACGAGCACACCGCC 62.760 66.667 0.00 0.00 44.04 6.13
2322 3879 4.980805 GACGAGCACACCGCCCAA 62.981 66.667 0.00 0.00 44.04 4.12
2323 3880 4.555709 ACGAGCACACCGCCCAAA 62.556 61.111 0.00 0.00 44.04 3.28
2324 3881 3.055719 CGAGCACACCGCCCAAAT 61.056 61.111 0.00 0.00 44.04 2.32
2325 3882 2.625823 CGAGCACACCGCCCAAATT 61.626 57.895 0.00 0.00 44.04 1.82
2326 3883 1.665442 GAGCACACCGCCCAAATTT 59.335 52.632 0.00 0.00 44.04 1.82
2327 3884 0.033366 GAGCACACCGCCCAAATTTT 59.967 50.000 0.00 0.00 44.04 1.82
2328 3885 0.033366 AGCACACCGCCCAAATTTTC 59.967 50.000 0.00 0.00 44.04 2.29
2329 3886 0.249657 GCACACCGCCCAAATTTTCA 60.250 50.000 0.00 0.00 32.94 2.69
2330 3887 1.782044 CACACCGCCCAAATTTTCAG 58.218 50.000 0.00 0.00 0.00 3.02
2331 3888 1.068434 CACACCGCCCAAATTTTCAGT 59.932 47.619 0.00 0.00 0.00 3.41
2332 3889 1.760029 ACACCGCCCAAATTTTCAGTT 59.240 42.857 0.00 0.00 0.00 3.16
2333 3890 2.169561 ACACCGCCCAAATTTTCAGTTT 59.830 40.909 0.00 0.00 0.00 2.66
2334 3891 3.202097 CACCGCCCAAATTTTCAGTTTT 58.798 40.909 0.00 0.00 0.00 2.43
2335 3892 3.625313 CACCGCCCAAATTTTCAGTTTTT 59.375 39.130 0.00 0.00 0.00 1.94
2336 3893 3.874543 ACCGCCCAAATTTTCAGTTTTTC 59.125 39.130 0.00 0.00 0.00 2.29
2337 3894 4.126437 CCGCCCAAATTTTCAGTTTTTCT 58.874 39.130 0.00 0.00 0.00 2.52
2338 3895 4.574421 CCGCCCAAATTTTCAGTTTTTCTT 59.426 37.500 0.00 0.00 0.00 2.52
2339 3896 5.065859 CCGCCCAAATTTTCAGTTTTTCTTT 59.934 36.000 0.00 0.00 0.00 2.52
2340 3897 6.404184 CCGCCCAAATTTTCAGTTTTTCTTTT 60.404 34.615 0.00 0.00 0.00 2.27
2341 3898 6.686679 CGCCCAAATTTTCAGTTTTTCTTTTC 59.313 34.615 0.00 0.00 0.00 2.29
2342 3899 7.413988 CGCCCAAATTTTCAGTTTTTCTTTTCT 60.414 33.333 0.00 0.00 0.00 2.52
2343 3900 8.243426 GCCCAAATTTTCAGTTTTTCTTTTCTT 58.757 29.630 0.00 0.00 0.00 2.52
2350 3907 9.685828 TTTTCAGTTTTTCTTTTCTTTTCGAGA 57.314 25.926 0.00 0.00 0.00 4.04
2351 3908 9.685828 TTTCAGTTTTTCTTTTCTTTTCGAGAA 57.314 25.926 0.00 0.00 42.56 2.87
2352 3909 8.895932 TCAGTTTTTCTTTTCTTTTCGAGAAG 57.104 30.769 9.36 9.36 44.80 2.85
2353 3910 8.512138 TCAGTTTTTCTTTTCTTTTCGAGAAGT 58.488 29.630 14.68 0.00 44.80 3.01
2354 3911 9.769093 CAGTTTTTCTTTTCTTTTCGAGAAGTA 57.231 29.630 14.68 3.35 44.80 2.24
2357 3914 9.730420 TTTTTCTTTTCTTTTCGAGAAGTATGG 57.270 29.630 14.68 5.66 44.80 2.74
2358 3915 8.446599 TTTCTTTTCTTTTCGAGAAGTATGGT 57.553 30.769 14.68 0.00 44.80 3.55
2359 3916 8.446599 TTCTTTTCTTTTCGAGAAGTATGGTT 57.553 30.769 14.68 0.00 44.80 3.67
2360 3917 7.861630 TCTTTTCTTTTCGAGAAGTATGGTTG 58.138 34.615 14.68 2.31 44.80 3.77
2361 3918 7.497909 TCTTTTCTTTTCGAGAAGTATGGTTGT 59.502 33.333 14.68 0.00 44.80 3.32
2362 3919 6.539649 TTCTTTTCGAGAAGTATGGTTGTG 57.460 37.500 14.68 0.00 39.44 3.33
2363 3920 4.451096 TCTTTTCGAGAAGTATGGTTGTGC 59.549 41.667 14.68 0.00 0.00 4.57
2364 3921 3.678056 TTCGAGAAGTATGGTTGTGCT 57.322 42.857 0.00 0.00 0.00 4.40
2365 3922 3.678056 TCGAGAAGTATGGTTGTGCTT 57.322 42.857 0.00 0.00 0.00 3.91
2366 3923 4.002906 TCGAGAAGTATGGTTGTGCTTT 57.997 40.909 0.00 0.00 0.00 3.51
2367 3924 3.994392 TCGAGAAGTATGGTTGTGCTTTC 59.006 43.478 0.00 0.00 0.00 2.62
2368 3925 3.125316 CGAGAAGTATGGTTGTGCTTTCC 59.875 47.826 0.00 0.00 0.00 3.13
2369 3926 3.074412 AGAAGTATGGTTGTGCTTTCCG 58.926 45.455 0.00 0.00 0.00 4.30
2370 3927 1.165270 AGTATGGTTGTGCTTTCCGC 58.835 50.000 0.00 0.00 39.77 5.54
2371 3928 0.179200 GTATGGTTGTGCTTTCCGCG 60.179 55.000 0.00 0.00 43.27 6.46
2372 3929 1.302383 TATGGTTGTGCTTTCCGCGG 61.302 55.000 22.12 22.12 43.27 6.46
2373 3930 2.975799 GGTTGTGCTTTCCGCGGA 60.976 61.111 27.28 27.28 43.27 5.54
2374 3931 2.548295 GGTTGTGCTTTCCGCGGAA 61.548 57.895 35.81 35.81 43.27 4.30
2375 3932 1.082104 GTTGTGCTTTCCGCGGAAG 60.082 57.895 36.54 29.58 43.27 3.46
2394 3951 7.946655 CGGAAGCAAATATGTACTTCTATGA 57.053 36.000 5.94 0.00 38.81 2.15
2395 3952 8.539770 CGGAAGCAAATATGTACTTCTATGAT 57.460 34.615 5.94 0.00 38.81 2.45
2396 3953 8.651588 CGGAAGCAAATATGTACTTCTATGATC 58.348 37.037 5.94 0.00 38.81 2.92
2397 3954 9.494271 GGAAGCAAATATGTACTTCTATGATCA 57.506 33.333 0.00 0.00 38.81 2.92
2400 3957 9.445878 AGCAAATATGTACTTCTATGATCATGG 57.554 33.333 18.72 15.61 0.00 3.66
2401 3958 9.440773 GCAAATATGTACTTCTATGATCATGGA 57.559 33.333 17.04 17.04 0.00 3.41
2422 3979 6.632171 GGAAATACAAAATTTTCCTGCTCG 57.368 37.500 0.00 0.00 44.86 5.03
2423 3980 6.386654 GGAAATACAAAATTTTCCTGCTCGA 58.613 36.000 0.00 0.00 44.86 4.04
2424 3981 6.866248 GGAAATACAAAATTTTCCTGCTCGAA 59.134 34.615 0.00 0.00 44.86 3.71
2425 3982 7.383843 GGAAATACAAAATTTTCCTGCTCGAAA 59.616 33.333 0.00 0.00 44.86 3.46
2426 3983 8.655651 AAATACAAAATTTTCCTGCTCGAAAA 57.344 26.923 12.04 12.04 43.78 2.29
2428 3985 9.921637 AATACAAAATTTTCCTGCTCGAAAATA 57.078 25.926 18.52 8.32 46.67 1.40
2429 3986 9.921637 ATACAAAATTTTCCTGCTCGAAAATAA 57.078 25.926 18.52 8.02 46.67 1.40
2430 3987 8.655651 ACAAAATTTTCCTGCTCGAAAATAAA 57.344 26.923 18.52 0.00 46.67 1.40
2431 3988 9.103861 ACAAAATTTTCCTGCTCGAAAATAAAA 57.896 25.926 18.52 0.00 46.67 1.52
2432 3989 9.928236 CAAAATTTTCCTGCTCGAAAATAAAAA 57.072 25.926 18.52 0.00 46.67 1.94
2435 3992 7.883229 TTTTCCTGCTCGAAAATAAAAATCC 57.117 32.000 7.23 0.00 36.93 3.01
2436 3993 6.582677 TTCCTGCTCGAAAATAAAAATCCA 57.417 33.333 0.00 0.00 0.00 3.41
2437 3994 6.773976 TCCTGCTCGAAAATAAAAATCCAT 57.226 33.333 0.00 0.00 0.00 3.41
2438 3995 6.563422 TCCTGCTCGAAAATAAAAATCCATG 58.437 36.000 0.00 0.00 0.00 3.66
2439 3996 5.232838 CCTGCTCGAAAATAAAAATCCATGC 59.767 40.000 0.00 0.00 0.00 4.06
2440 3997 5.718146 TGCTCGAAAATAAAAATCCATGCA 58.282 33.333 0.00 0.00 0.00 3.96
2441 3998 6.162079 TGCTCGAAAATAAAAATCCATGCAA 58.838 32.000 0.00 0.00 0.00 4.08
2442 3999 6.648310 TGCTCGAAAATAAAAATCCATGCAAA 59.352 30.769 0.00 0.00 0.00 3.68
2443 4000 7.172190 TGCTCGAAAATAAAAATCCATGCAAAA 59.828 29.630 0.00 0.00 0.00 2.44
2444 4001 7.689400 GCTCGAAAATAAAAATCCATGCAAAAG 59.311 33.333 0.00 0.00 0.00 2.27
2445 4002 8.824159 TCGAAAATAAAAATCCATGCAAAAGA 57.176 26.923 0.00 0.00 0.00 2.52
2446 4003 9.434420 TCGAAAATAAAAATCCATGCAAAAGAT 57.566 25.926 0.00 0.00 0.00 2.40
2452 4009 7.677454 AAAAATCCATGCAAAAGATTTCTCC 57.323 32.000 17.28 0.00 38.85 3.71
2453 4010 6.363167 AAATCCATGCAAAAGATTTCTCCA 57.637 33.333 13.30 0.00 35.80 3.86
2454 4011 6.555463 AATCCATGCAAAAGATTTCTCCAT 57.445 33.333 0.00 0.00 0.00 3.41
2455 4012 7.664552 AATCCATGCAAAAGATTTCTCCATA 57.335 32.000 0.00 0.00 0.00 2.74
2456 4013 7.664552 ATCCATGCAAAAGATTTCTCCATAA 57.335 32.000 0.00 0.00 0.00 1.90
2457 4014 6.866480 TCCATGCAAAAGATTTCTCCATAAC 58.134 36.000 0.00 0.00 0.00 1.89
2458 4015 6.044682 CCATGCAAAAGATTTCTCCATAACC 58.955 40.000 0.00 0.00 0.00 2.85
2459 4016 6.127253 CCATGCAAAAGATTTCTCCATAACCT 60.127 38.462 0.00 0.00 0.00 3.50
2460 4017 7.068593 CCATGCAAAAGATTTCTCCATAACCTA 59.931 37.037 0.00 0.00 0.00 3.08
2461 4018 8.469200 CATGCAAAAGATTTCTCCATAACCTAA 58.531 33.333 0.00 0.00 0.00 2.69
2462 4019 8.055279 TGCAAAAGATTTCTCCATAACCTAAG 57.945 34.615 0.00 0.00 0.00 2.18
2463 4020 7.888021 TGCAAAAGATTTCTCCATAACCTAAGA 59.112 33.333 0.00 0.00 0.00 2.10
2464 4021 8.739972 GCAAAAGATTTCTCCATAACCTAAGAA 58.260 33.333 0.00 0.00 0.00 2.52
2469 4026 9.244292 AGATTTCTCCATAACCTAAGAAAAACC 57.756 33.333 0.00 0.00 40.14 3.27
2470 4027 8.950007 ATTTCTCCATAACCTAAGAAAAACCA 57.050 30.769 0.00 0.00 40.14 3.67
2471 4028 8.770010 TTTCTCCATAACCTAAGAAAAACCAA 57.230 30.769 0.00 0.00 35.43 3.67
2472 4029 8.950007 TTCTCCATAACCTAAGAAAAACCAAT 57.050 30.769 0.00 0.00 0.00 3.16
2473 4030 8.348285 TCTCCATAACCTAAGAAAAACCAATG 57.652 34.615 0.00 0.00 0.00 2.82
2474 4031 8.167392 TCTCCATAACCTAAGAAAAACCAATGA 58.833 33.333 0.00 0.00 0.00 2.57
2475 4032 8.713708 TCCATAACCTAAGAAAAACCAATGAA 57.286 30.769 0.00 0.00 0.00 2.57
2476 4033 9.148879 TCCATAACCTAAGAAAAACCAATGAAA 57.851 29.630 0.00 0.00 0.00 2.69
2477 4034 9.771534 CCATAACCTAAGAAAAACCAATGAAAA 57.228 29.630 0.00 0.00 0.00 2.29
2480 4037 8.587952 AACCTAAGAAAAACCAATGAAAATCG 57.412 30.769 0.00 0.00 0.00 3.34
2481 4038 7.947282 ACCTAAGAAAAACCAATGAAAATCGA 58.053 30.769 0.00 0.00 0.00 3.59
2482 4039 8.417884 ACCTAAGAAAAACCAATGAAAATCGAA 58.582 29.630 0.00 0.00 0.00 3.71
2483 4040 9.255304 CCTAAGAAAAACCAATGAAAATCGAAA 57.745 29.630 0.00 0.00 0.00 3.46
2486 4043 8.940768 AGAAAAACCAATGAAAATCGAAAAGA 57.059 26.923 0.00 0.00 0.00 2.52
2487 4044 8.817100 AGAAAAACCAATGAAAATCGAAAAGAC 58.183 29.630 0.00 0.00 0.00 3.01
2488 4045 8.485976 AAAAACCAATGAAAATCGAAAAGACA 57.514 26.923 0.00 0.00 0.00 3.41
2489 4046 8.485976 AAAACCAATGAAAATCGAAAAGACAA 57.514 26.923 0.00 0.00 0.00 3.18
2490 4047 8.485976 AAACCAATGAAAATCGAAAAGACAAA 57.514 26.923 0.00 0.00 0.00 2.83
2491 4048 8.485976 AACCAATGAAAATCGAAAAGACAAAA 57.514 26.923 0.00 0.00 0.00 2.44
2492 4049 8.485976 ACCAATGAAAATCGAAAAGACAAAAA 57.514 26.923 0.00 0.00 0.00 1.94
2519 4076 4.657436 AAAAACCCGAAAGCACATACAA 57.343 36.364 0.00 0.00 0.00 2.41
2520 4077 4.657436 AAAACCCGAAAGCACATACAAA 57.343 36.364 0.00 0.00 0.00 2.83
2521 4078 3.915437 AACCCGAAAGCACATACAAAG 57.085 42.857 0.00 0.00 0.00 2.77
2522 4079 3.134574 ACCCGAAAGCACATACAAAGA 57.865 42.857 0.00 0.00 0.00 2.52
2523 4080 3.686016 ACCCGAAAGCACATACAAAGAT 58.314 40.909 0.00 0.00 0.00 2.40
2524 4081 3.689649 ACCCGAAAGCACATACAAAGATC 59.310 43.478 0.00 0.00 0.00 2.75
2525 4082 3.941483 CCCGAAAGCACATACAAAGATCT 59.059 43.478 0.00 0.00 0.00 2.75
2526 4083 5.116180 CCCGAAAGCACATACAAAGATCTA 58.884 41.667 0.00 0.00 0.00 1.98
2527 4084 5.235186 CCCGAAAGCACATACAAAGATCTAG 59.765 44.000 0.00 0.00 0.00 2.43
2528 4085 6.042777 CCGAAAGCACATACAAAGATCTAGA 58.957 40.000 0.00 0.00 0.00 2.43
2529 4086 6.199908 CCGAAAGCACATACAAAGATCTAGAG 59.800 42.308 0.00 0.00 0.00 2.43
2530 4087 6.199908 CGAAAGCACATACAAAGATCTAGAGG 59.800 42.308 0.00 0.00 0.00 3.69
2531 4088 6.798427 AAGCACATACAAAGATCTAGAGGA 57.202 37.500 0.00 0.00 0.00 3.71
2532 4089 6.798427 AGCACATACAAAGATCTAGAGGAA 57.202 37.500 0.00 0.00 0.00 3.36
2533 4090 6.815089 AGCACATACAAAGATCTAGAGGAAG 58.185 40.000 0.00 0.00 0.00 3.46
2534 4091 5.465056 GCACATACAAAGATCTAGAGGAAGC 59.535 44.000 0.00 0.00 0.00 3.86
2535 4092 6.577103 CACATACAAAGATCTAGAGGAAGCA 58.423 40.000 0.00 0.00 0.00 3.91
2536 4093 6.478344 CACATACAAAGATCTAGAGGAAGCAC 59.522 42.308 0.00 0.00 0.00 4.40
2537 4094 4.479786 ACAAAGATCTAGAGGAAGCACC 57.520 45.455 0.00 0.00 39.35 5.01
2538 4095 3.198853 ACAAAGATCTAGAGGAAGCACCC 59.801 47.826 0.00 0.00 40.05 4.61
2539 4096 2.856760 AGATCTAGAGGAAGCACCCA 57.143 50.000 0.00 0.00 40.05 4.51
2540 4097 3.121929 AGATCTAGAGGAAGCACCCAA 57.878 47.619 0.00 0.00 40.05 4.12
2541 4098 2.769095 AGATCTAGAGGAAGCACCCAAC 59.231 50.000 0.00 0.00 40.05 3.77
2542 4099 2.024176 TCTAGAGGAAGCACCCAACA 57.976 50.000 0.00 0.00 40.05 3.33
2543 4100 1.623811 TCTAGAGGAAGCACCCAACAC 59.376 52.381 0.00 0.00 40.05 3.32
2544 4101 1.347707 CTAGAGGAAGCACCCAACACA 59.652 52.381 0.00 0.00 40.05 3.72
2545 4102 0.773644 AGAGGAAGCACCCAACACAT 59.226 50.000 0.00 0.00 40.05 3.21
2546 4103 0.883833 GAGGAAGCACCCAACACATG 59.116 55.000 0.00 0.00 40.05 3.21
2547 4104 0.478072 AGGAAGCACCCAACACATGA 59.522 50.000 0.00 0.00 40.05 3.07
2548 4105 1.133513 AGGAAGCACCCAACACATGAA 60.134 47.619 0.00 0.00 40.05 2.57
2549 4106 1.686052 GGAAGCACCCAACACATGAAA 59.314 47.619 0.00 0.00 0.00 2.69
2550 4107 2.102252 GGAAGCACCCAACACATGAAAA 59.898 45.455 0.00 0.00 0.00 2.29
2551 4108 3.431486 GGAAGCACCCAACACATGAAAAA 60.431 43.478 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 1.073897 GCCTGAGCCCACTTTGACT 59.926 57.895 0.00 0.00 0.00 3.41
75 76 0.245539 CATTGCCTGAGCCCACTTTG 59.754 55.000 0.00 0.00 38.69 2.77
76 77 0.178953 ACATTGCCTGAGCCCACTTT 60.179 50.000 0.00 0.00 38.69 2.66
103 104 5.105554 GCTTCTGATTCTTGTCTGACCTCTA 60.106 44.000 5.17 0.00 0.00 2.43
118 119 6.715280 TCCTCTTGTTCTTATGCTTCTGATT 58.285 36.000 0.00 0.00 0.00 2.57
129 130 6.996180 TTCTTCTTCCTCCTCTTGTTCTTA 57.004 37.500 0.00 0.00 0.00 2.10
174 175 2.679059 GCTGATGTGCTGCTTCCTCTTA 60.679 50.000 0.00 0.00 38.32 2.10
204 205 8.924691 CGATTTCATCATCTTTCTCTTCCTATC 58.075 37.037 0.00 0.00 0.00 2.08
205 206 7.387397 GCGATTTCATCATCTTTCTCTTCCTAT 59.613 37.037 0.00 0.00 0.00 2.57
206 207 6.703607 GCGATTTCATCATCTTTCTCTTCCTA 59.296 38.462 0.00 0.00 0.00 2.94
207 208 5.526846 GCGATTTCATCATCTTTCTCTTCCT 59.473 40.000 0.00 0.00 0.00 3.36
208 209 5.295292 TGCGATTTCATCATCTTTCTCTTCC 59.705 40.000 0.00 0.00 0.00 3.46
209 210 6.190962 GTGCGATTTCATCATCTTTCTCTTC 58.809 40.000 0.00 0.00 0.00 2.87
215 216 5.431765 ACTAGGTGCGATTTCATCATCTTT 58.568 37.500 0.00 0.00 0.00 2.52
220 239 4.119862 GCTAACTAGGTGCGATTTCATCA 58.880 43.478 0.00 0.00 0.00 3.07
227 246 4.060900 CAATGATGCTAACTAGGTGCGAT 58.939 43.478 0.00 0.00 0.00 4.58
229 248 3.457234 TCAATGATGCTAACTAGGTGCG 58.543 45.455 0.00 0.00 0.00 5.34
353 378 4.021456 TGGTGATCTTACTACACACACTGG 60.021 45.833 0.00 0.00 36.42 4.00
439 475 3.877612 TTGCATGCGTCGCTGTTGC 62.878 57.895 23.96 23.96 33.10 4.17
472 508 5.950883 TCTGTACGAGGAAATCAACTAGTG 58.049 41.667 0.00 0.00 0.00 2.74
499 535 4.342378 TGTAGTTTGGTTGCCTGCATTAAA 59.658 37.500 0.00 0.00 0.00 1.52
527 563 6.644592 GCAAATGCTGACTAAAAACCAACATA 59.355 34.615 0.00 0.00 38.21 2.29
561 598 6.647067 CCTACTTGTTCTTGTTCTAGTTGAGG 59.353 42.308 0.00 0.00 0.00 3.86
563 600 5.989777 GCCTACTTGTTCTTGTTCTAGTTGA 59.010 40.000 0.00 0.00 0.00 3.18
596 633 1.317431 GGGGGCGTATTTGGTTCACC 61.317 60.000 0.00 0.00 0.00 4.02
623 661 1.088306 TGTTCCAAACGTGTCCACAC 58.912 50.000 0.00 0.00 43.15 3.82
624 662 1.469308 GTTGTTCCAAACGTGTCCACA 59.531 47.619 0.00 0.00 0.00 4.17
625 663 1.202211 GGTTGTTCCAAACGTGTCCAC 60.202 52.381 0.00 0.00 35.97 4.02
626 664 1.096416 GGTTGTTCCAAACGTGTCCA 58.904 50.000 0.00 0.00 35.97 4.02
627 665 1.096416 TGGTTGTTCCAAACGTGTCC 58.904 50.000 0.00 0.00 44.12 4.02
636 674 1.249407 GGGCGTATTTGGTTGTTCCA 58.751 50.000 0.00 0.00 45.60 3.53
637 675 0.528924 GGGGCGTATTTGGTTGTTCC 59.471 55.000 0.00 0.00 0.00 3.62
638 676 0.528924 GGGGGCGTATTTGGTTGTTC 59.471 55.000 0.00 0.00 0.00 3.18
639 677 1.245376 CGGGGGCGTATTTGGTTGTT 61.245 55.000 0.00 0.00 0.00 2.83
640 678 1.676303 CGGGGGCGTATTTGGTTGT 60.676 57.895 0.00 0.00 0.00 3.32
641 679 1.676303 ACGGGGGCGTATTTGGTTG 60.676 57.895 0.00 0.00 0.00 3.77
642 680 1.676303 CACGGGGGCGTATTTGGTT 60.676 57.895 0.00 0.00 0.00 3.67
643 681 2.045731 CACGGGGGCGTATTTGGT 60.046 61.111 0.00 0.00 0.00 3.67
644 682 3.514362 GCACGGGGGCGTATTTGG 61.514 66.667 0.00 0.00 0.00 3.28
645 683 2.748251 TGCACGGGGGCGTATTTG 60.748 61.111 0.00 0.00 36.28 2.32
646 684 2.748647 GTGCACGGGGGCGTATTT 60.749 61.111 0.00 0.00 36.28 1.40
647 685 4.789123 GGTGCACGGGGGCGTATT 62.789 66.667 11.45 0.00 36.28 1.89
666 704 1.822506 TTGTTCCAAACGTGTCCACA 58.177 45.000 0.00 0.00 0.00 4.17
667 705 2.162809 ACTTTGTTCCAAACGTGTCCAC 59.837 45.455 0.00 0.00 0.00 4.02
671 709 2.078392 ACGACTTTGTTCCAAACGTGT 58.922 42.857 0.00 0.00 0.00 4.49
676 714 2.940410 GGACTGACGACTTTGTTCCAAA 59.060 45.455 0.00 0.00 0.00 3.28
679 717 1.137513 CGGACTGACGACTTTGTTCC 58.862 55.000 0.00 0.00 35.47 3.62
693 731 1.616628 AGGAATCTTGGCCCGGACT 60.617 57.895 0.73 0.00 0.00 3.85
696 734 2.193248 GGAGGAATCTTGGCCCGG 59.807 66.667 0.00 0.00 0.00 5.73
731 769 2.138320 CAGTTGCTGTCGACAAGTGAT 58.862 47.619 20.49 3.05 46.70 3.06
735 773 1.571460 GCCAGTTGCTGTCGACAAG 59.429 57.895 20.49 14.27 36.87 3.16
817 859 2.811317 CGAGTCTCAAGTGGCGGC 60.811 66.667 0.00 0.00 0.00 6.53
819 861 2.811317 GGCGAGTCTCAAGTGGCG 60.811 66.667 0.00 0.00 30.82 5.69
820 862 1.739562 CAGGCGAGTCTCAAGTGGC 60.740 63.158 0.00 0.00 0.00 5.01
821 863 1.079543 CCAGGCGAGTCTCAAGTGG 60.080 63.158 0.00 0.00 0.00 4.00
823 865 1.228894 TCCCAGGCGAGTCTCAAGT 60.229 57.895 0.00 0.00 0.00 3.16
824 866 1.216710 GTCCCAGGCGAGTCTCAAG 59.783 63.158 0.00 0.00 0.00 3.02
825 867 2.636412 CGTCCCAGGCGAGTCTCAA 61.636 63.158 0.00 0.00 0.00 3.02
826 868 3.062466 CGTCCCAGGCGAGTCTCA 61.062 66.667 0.00 0.00 0.00 3.27
827 869 3.827898 CCGTCCCAGGCGAGTCTC 61.828 72.222 0.00 0.00 0.00 3.36
844 886 2.574736 GAGTCGTCGCGTCTCTGC 60.575 66.667 5.77 0.00 38.54 4.26
851 893 1.275471 TTGCTTCAAGAGTCGTCGCG 61.275 55.000 0.00 0.00 0.00 5.87
886 938 1.299976 GGGGTTGGTGTAGAGCAGG 59.700 63.158 0.00 0.00 0.00 4.85
922 979 4.335647 AGCGGCAGGGTCTGGTTG 62.336 66.667 1.45 0.00 31.21 3.77
935 992 4.504916 CTCGACTGAGGCCAGCGG 62.505 72.222 5.01 3.86 44.16 5.52
943 1000 3.522731 CCGCCTCCCTCGACTGAG 61.523 72.222 0.40 0.40 42.18 3.35
944 1001 3.997400 CTCCGCCTCCCTCGACTGA 62.997 68.421 0.00 0.00 0.00 3.41
945 1002 3.522731 CTCCGCCTCCCTCGACTG 61.523 72.222 0.00 0.00 0.00 3.51
963 1020 4.988598 AGTGGTTGGCTGCGTCCG 62.989 66.667 0.00 0.00 0.00 4.79
1110 1205 1.203523 CTGTGAAGAAGAGTCGGGAGG 59.796 57.143 0.00 0.00 0.00 4.30
1187 1326 1.007336 TCCTCGCGCGAAAAGAGAAC 61.007 55.000 33.99 0.00 34.13 3.01
1234 1379 4.137872 CCGCCGTCGCCCTTCTTA 62.138 66.667 0.00 0.00 0.00 2.10
1393 1553 2.418777 TCGGCCTCGAGCATCATG 59.581 61.111 6.99 0.00 46.50 3.07
1459 1634 4.552365 CGGGCGGCATCACCATCT 62.552 66.667 12.47 0.00 39.03 2.90
1562 1746 7.390440 TCACTGAAACTTAACAAGGATACATGG 59.610 37.037 0.00 0.00 40.32 3.66
1563 1747 8.322906 TCACTGAAACTTAACAAGGATACATG 57.677 34.615 0.00 0.00 42.18 3.21
1564 1748 9.520515 AATCACTGAAACTTAACAAGGATACAT 57.479 29.630 0.00 0.00 41.41 2.29
1566 1750 9.827411 GAAATCACTGAAACTTAACAAGGATAC 57.173 33.333 0.00 0.00 0.00 2.24
1567 1751 9.010029 GGAAATCACTGAAACTTAACAAGGATA 57.990 33.333 0.00 0.00 0.00 2.59
1568 1752 7.725844 AGGAAATCACTGAAACTTAACAAGGAT 59.274 33.333 0.00 0.00 0.00 3.24
1569 1753 7.060421 AGGAAATCACTGAAACTTAACAAGGA 58.940 34.615 0.00 0.00 0.00 3.36
1570 1754 7.277174 AGGAAATCACTGAAACTTAACAAGG 57.723 36.000 0.00 0.00 0.00 3.61
1571 1755 8.624776 AGAAGGAAATCACTGAAACTTAACAAG 58.375 33.333 0.00 0.00 0.00 3.16
1572 1756 8.405531 CAGAAGGAAATCACTGAAACTTAACAA 58.594 33.333 0.00 0.00 32.90 2.83
1573 1757 7.556275 ACAGAAGGAAATCACTGAAACTTAACA 59.444 33.333 0.00 0.00 34.88 2.41
1574 1758 7.857885 CACAGAAGGAAATCACTGAAACTTAAC 59.142 37.037 0.00 0.00 34.88 2.01
1576 1760 7.279615 TCACAGAAGGAAATCACTGAAACTTA 58.720 34.615 0.00 0.00 34.88 2.24
1577 1761 6.122277 TCACAGAAGGAAATCACTGAAACTT 58.878 36.000 0.00 0.00 34.88 2.66
1578 1762 5.684704 TCACAGAAGGAAATCACTGAAACT 58.315 37.500 0.00 0.00 34.88 2.66
1595 1780 4.564782 ATTTCAGAGCAGGATTCACAGA 57.435 40.909 0.00 0.00 0.00 3.41
1596 1781 4.698780 TCAATTTCAGAGCAGGATTCACAG 59.301 41.667 0.00 0.00 0.00 3.66
1597 1782 4.654915 TCAATTTCAGAGCAGGATTCACA 58.345 39.130 0.00 0.00 0.00 3.58
1598 1783 5.633830 TTCAATTTCAGAGCAGGATTCAC 57.366 39.130 0.00 0.00 0.00 3.18
1599 1784 6.653526 TTTTCAATTTCAGAGCAGGATTCA 57.346 33.333 0.00 0.00 0.00 2.57
1600 1785 9.643693 TTAATTTTCAATTTCAGAGCAGGATTC 57.356 29.630 0.00 0.00 0.00 2.52
1633 1841 3.875727 CACTGAAGCTGTAAGGATGGATG 59.124 47.826 0.00 0.00 0.00 3.51
1634 1842 3.776969 TCACTGAAGCTGTAAGGATGGAT 59.223 43.478 0.00 0.00 0.00 3.41
1635 1843 3.173151 TCACTGAAGCTGTAAGGATGGA 58.827 45.455 0.00 0.00 0.00 3.41
1637 1845 4.125703 GGATCACTGAAGCTGTAAGGATG 58.874 47.826 0.00 0.00 0.00 3.51
1638 1846 3.776969 TGGATCACTGAAGCTGTAAGGAT 59.223 43.478 0.00 0.00 0.00 3.24
1639 1847 3.173151 TGGATCACTGAAGCTGTAAGGA 58.827 45.455 0.00 0.00 0.00 3.36
1640 1848 3.616956 TGGATCACTGAAGCTGTAAGG 57.383 47.619 0.00 0.00 0.00 2.69
1641 1849 5.911752 ACTATGGATCACTGAAGCTGTAAG 58.088 41.667 0.00 0.00 0.00 2.34
1642 1850 5.939764 ACTATGGATCACTGAAGCTGTAA 57.060 39.130 0.00 0.00 0.00 2.41
1643 1851 5.664457 CAACTATGGATCACTGAAGCTGTA 58.336 41.667 0.00 0.00 0.00 2.74
1644 1852 4.511527 CAACTATGGATCACTGAAGCTGT 58.488 43.478 0.00 0.00 0.00 4.40
1648 1856 4.080919 TGACCCAACTATGGATCACTGAAG 60.081 45.833 0.00 0.00 41.81 3.02
1668 1876 1.265095 CACACAATCAGCCACTGTGAC 59.735 52.381 9.86 0.00 42.48 3.67
1678 1886 7.961283 CAGATGTTAACATTCTCACACAATCAG 59.039 37.037 21.63 0.00 36.57 2.90
1680 1888 6.744537 GCAGATGTTAACATTCTCACACAATC 59.255 38.462 21.63 5.99 36.57 2.67
1712 1920 1.159285 CACGAGCTTCCAATGCAGAA 58.841 50.000 0.00 0.00 0.00 3.02
1725 1933 4.928661 ATTGATCTACAACAACACGAGC 57.071 40.909 0.00 0.00 41.52 5.03
1736 1944 7.043961 AGCAGATTTCGTCTATTGATCTACA 57.956 36.000 0.00 0.00 34.69 2.74
1738 1946 7.716612 TCAAGCAGATTTCGTCTATTGATCTA 58.283 34.615 0.00 0.00 37.13 1.98
1739 1947 6.577103 TCAAGCAGATTTCGTCTATTGATCT 58.423 36.000 0.00 0.00 37.13 2.75
1742 1950 6.037500 CCAATCAAGCAGATTTCGTCTATTGA 59.962 38.462 2.06 7.10 44.48 2.57
1743 1951 6.183360 ACCAATCAAGCAGATTTCGTCTATTG 60.183 38.462 2.06 0.00 44.48 1.90
1746 1954 4.832248 ACCAATCAAGCAGATTTCGTCTA 58.168 39.130 2.06 0.00 44.48 2.59
1757 1965 0.960364 GCTTCCGGACCAATCAAGCA 60.960 55.000 15.49 0.00 39.45 3.91
1759 1967 1.369091 CGGCTTCCGGACCAATCAAG 61.369 60.000 1.83 0.00 44.15 3.02
1760 1968 1.376683 CGGCTTCCGGACCAATCAA 60.377 57.895 1.83 0.00 44.15 2.57
1761 1969 2.267642 CGGCTTCCGGACCAATCA 59.732 61.111 1.83 0.00 44.15 2.57
1784 2023 1.114627 TGATAGCGTGCAGAGATGGT 58.885 50.000 0.00 0.00 0.00 3.55
1803 2043 8.169393 TGTCATGAATCTCCTGATAGAGTAGAT 58.831 37.037 0.00 0.00 35.28 1.98
1804 2044 7.521669 TGTCATGAATCTCCTGATAGAGTAGA 58.478 38.462 0.00 0.00 35.28 2.59
1805 2045 7.448161 ACTGTCATGAATCTCCTGATAGAGTAG 59.552 40.741 0.00 0.00 35.17 2.57
1806 2046 7.230309 CACTGTCATGAATCTCCTGATAGAGTA 59.770 40.741 0.00 0.00 35.17 2.59
1807 2047 6.040729 CACTGTCATGAATCTCCTGATAGAGT 59.959 42.308 0.00 0.00 35.17 3.24
1808 2048 6.264970 TCACTGTCATGAATCTCCTGATAGAG 59.735 42.308 0.00 5.30 35.17 2.43
1845 2085 5.765576 TCCAAACCAGGCTAATTGTACTA 57.234 39.130 0.00 0.00 0.00 1.82
1865 2106 3.010420 GACTTGAAGCCCACAGTTATCC 58.990 50.000 0.00 0.00 0.00 2.59
1877 2118 4.391830 TCCATATTCAACACGACTTGAAGC 59.608 41.667 14.53 0.00 42.13 3.86
1907 2963 3.369261 GGATCACTATGCCATGGCTAGAG 60.369 52.174 35.53 28.55 42.51 2.43
1921 3450 5.068329 GTCAGTCATCTGTCATGGATCACTA 59.932 44.000 0.00 0.00 41.91 2.74
1934 3463 2.290531 ATGTCGCAGTCAGTCATCTG 57.709 50.000 0.00 0.00 42.54 2.90
1935 3464 3.056250 AGAAATGTCGCAGTCAGTCATCT 60.056 43.478 0.00 0.00 0.00 2.90
1937 3466 3.325293 AGAAATGTCGCAGTCAGTCAT 57.675 42.857 0.00 0.00 0.00 3.06
1939 3468 3.059884 TGAAGAAATGTCGCAGTCAGTC 58.940 45.455 0.00 0.00 0.00 3.51
1958 3487 0.482446 AGCCACCAATTCCAACCTGA 59.518 50.000 0.00 0.00 0.00 3.86
1982 3539 3.525800 ACAAACAAGGCCTCCATAGTT 57.474 42.857 5.23 3.58 0.00 2.24
1983 3540 3.074538 AGAACAAACAAGGCCTCCATAGT 59.925 43.478 5.23 0.00 0.00 2.12
1984 3541 3.690460 AGAACAAACAAGGCCTCCATAG 58.310 45.455 5.23 0.00 0.00 2.23
1985 3542 3.806949 AGAACAAACAAGGCCTCCATA 57.193 42.857 5.23 0.00 0.00 2.74
1986 3543 2.683211 AGAACAAACAAGGCCTCCAT 57.317 45.000 5.23 0.00 0.00 3.41
2051 3608 6.347240 GCTGACACTCAACATATATAAGCTGC 60.347 42.308 0.00 0.00 0.00 5.25
2059 3616 6.036577 TGAACTGCTGACACTCAACATATA 57.963 37.500 0.00 0.00 0.00 0.86
2060 3617 4.898320 TGAACTGCTGACACTCAACATAT 58.102 39.130 0.00 0.00 0.00 1.78
2061 3618 4.309933 CTGAACTGCTGACACTCAACATA 58.690 43.478 0.00 0.00 0.00 2.29
2062 3619 3.136763 CTGAACTGCTGACACTCAACAT 58.863 45.455 0.00 0.00 0.00 2.71
2067 3624 0.034616 AGGCTGAACTGCTGACACTC 59.965 55.000 0.00 0.00 0.00 3.51
2080 3637 0.112995 ACATGGCAAAGGAAGGCTGA 59.887 50.000 0.00 0.00 0.00 4.26
2081 3638 0.971386 AACATGGCAAAGGAAGGCTG 59.029 50.000 0.00 0.00 0.00 4.85
2097 3654 8.998814 TGGGGAGATAAAGACATCTAATAAACA 58.001 33.333 0.00 0.00 35.37 2.83
2101 3658 8.798975 AACTGGGGAGATAAAGACATCTAATA 57.201 34.615 0.00 0.00 35.37 0.98
2118 3675 2.073716 ACCGGACACAAACTGGGGA 61.074 57.895 9.46 0.00 38.04 4.81
2119 3676 1.896660 CACCGGACACAAACTGGGG 60.897 63.158 9.46 0.00 38.04 4.96
2120 3677 0.107081 TACACCGGACACAAACTGGG 59.893 55.000 9.46 0.00 38.04 4.45
2121 3678 1.956297 TTACACCGGACACAAACTGG 58.044 50.000 9.46 0.00 39.46 4.00
2122 3679 3.186409 CAGATTACACCGGACACAAACTG 59.814 47.826 9.46 7.06 0.00 3.16
2123 3680 3.181458 ACAGATTACACCGGACACAAACT 60.181 43.478 9.46 0.00 0.00 2.66
2124 3681 3.059188 CACAGATTACACCGGACACAAAC 60.059 47.826 9.46 0.00 0.00 2.93
2125 3682 3.135225 CACAGATTACACCGGACACAAA 58.865 45.455 9.46 0.00 0.00 2.83
2126 3683 2.365941 TCACAGATTACACCGGACACAA 59.634 45.455 9.46 0.00 0.00 3.33
2127 3684 1.964933 TCACAGATTACACCGGACACA 59.035 47.619 9.46 0.00 0.00 3.72
2128 3685 2.607187 CTCACAGATTACACCGGACAC 58.393 52.381 9.46 0.00 0.00 3.67
2129 3686 1.548719 CCTCACAGATTACACCGGACA 59.451 52.381 9.46 0.00 0.00 4.02
2130 3687 1.134788 CCCTCACAGATTACACCGGAC 60.135 57.143 9.46 0.00 0.00 4.79
2131 3688 1.191535 CCCTCACAGATTACACCGGA 58.808 55.000 9.46 0.00 0.00 5.14
2132 3689 0.462047 GCCCTCACAGATTACACCGG 60.462 60.000 0.00 0.00 0.00 5.28
2133 3690 0.537188 AGCCCTCACAGATTACACCG 59.463 55.000 0.00 0.00 0.00 4.94
2134 3691 2.633488 GAAGCCCTCACAGATTACACC 58.367 52.381 0.00 0.00 0.00 4.16
2135 3692 2.027192 TGGAAGCCCTCACAGATTACAC 60.027 50.000 0.00 0.00 0.00 2.90
2136 3693 2.237143 CTGGAAGCCCTCACAGATTACA 59.763 50.000 0.00 0.00 32.86 2.41
2137 3694 2.237392 ACTGGAAGCCCTCACAGATTAC 59.763 50.000 0.00 0.00 37.60 1.89
2138 3695 2.501723 GACTGGAAGCCCTCACAGATTA 59.498 50.000 0.00 0.00 37.60 1.75
2139 3696 1.280421 GACTGGAAGCCCTCACAGATT 59.720 52.381 0.00 0.00 37.60 2.40
2140 3697 0.908198 GACTGGAAGCCCTCACAGAT 59.092 55.000 0.00 0.00 37.60 2.90
2141 3698 0.178921 AGACTGGAAGCCCTCACAGA 60.179 55.000 0.00 0.00 37.60 3.41
2142 3699 0.036577 CAGACTGGAAGCCCTCACAG 60.037 60.000 0.00 0.00 37.60 3.66
2143 3700 0.471780 TCAGACTGGAAGCCCTCACA 60.472 55.000 1.81 0.00 37.60 3.58
2144 3701 0.248843 CTCAGACTGGAAGCCCTCAC 59.751 60.000 1.81 0.00 37.60 3.51
2145 3702 0.115152 TCTCAGACTGGAAGCCCTCA 59.885 55.000 1.81 0.00 37.60 3.86
2146 3703 0.534873 GTCTCAGACTGGAAGCCCTC 59.465 60.000 1.81 0.00 37.60 4.30
2147 3704 0.116143 AGTCTCAGACTGGAAGCCCT 59.884 55.000 6.50 0.00 41.76 5.19
2148 3705 2.677508 AGTCTCAGACTGGAAGCCC 58.322 57.895 6.50 0.00 41.76 5.19
2156 3713 3.237268 ACTTGAGGTCAGTCTCAGACT 57.763 47.619 0.00 0.00 44.44 3.24
2157 3714 5.047660 ACATAACTTGAGGTCAGTCTCAGAC 60.048 44.000 0.00 0.00 43.64 3.51
2158 3715 5.080337 ACATAACTTGAGGTCAGTCTCAGA 58.920 41.667 0.00 0.00 43.64 3.27
2159 3716 5.398603 ACATAACTTGAGGTCAGTCTCAG 57.601 43.478 0.00 0.00 43.64 3.35
2160 3717 6.911250 TTACATAACTTGAGGTCAGTCTCA 57.089 37.500 0.00 0.00 41.51 3.27
2161 3718 8.035394 TCATTTACATAACTTGAGGTCAGTCTC 58.965 37.037 0.00 0.00 0.00 3.36
2162 3719 7.907389 TCATTTACATAACTTGAGGTCAGTCT 58.093 34.615 0.00 0.00 0.00 3.24
2163 3720 7.278868 CCTCATTTACATAACTTGAGGTCAGTC 59.721 40.741 15.60 0.00 37.33 3.51
2164 3721 7.106239 CCTCATTTACATAACTTGAGGTCAGT 58.894 38.462 15.60 0.00 37.33 3.41
2165 3722 6.540189 CCCTCATTTACATAACTTGAGGTCAG 59.460 42.308 19.23 8.36 39.66 3.51
2166 3723 6.414732 CCCTCATTTACATAACTTGAGGTCA 58.585 40.000 19.23 0.00 39.66 4.02
2167 3724 5.297029 GCCCTCATTTACATAACTTGAGGTC 59.703 44.000 19.23 10.04 39.66 3.85
2168 3725 5.193679 GCCCTCATTTACATAACTTGAGGT 58.806 41.667 19.23 0.00 39.66 3.85
2169 3726 5.192927 TGCCCTCATTTACATAACTTGAGG 58.807 41.667 16.34 16.34 40.63 3.86
2170 3727 6.543465 TGATGCCCTCATTTACATAACTTGAG 59.457 38.462 0.00 0.00 31.96 3.02
2171 3728 6.422333 TGATGCCCTCATTTACATAACTTGA 58.578 36.000 0.00 0.00 31.96 3.02
2172 3729 6.698008 TGATGCCCTCATTTACATAACTTG 57.302 37.500 0.00 0.00 31.96 3.16
2184 3741 1.671979 CACGACAATGATGCCCTCAT 58.328 50.000 0.00 0.00 46.87 2.90
2185 3742 1.026182 GCACGACAATGATGCCCTCA 61.026 55.000 0.00 0.00 38.53 3.86
2186 3743 0.745845 AGCACGACAATGATGCCCTC 60.746 55.000 0.00 0.00 40.33 4.30
2187 3744 0.322816 AAGCACGACAATGATGCCCT 60.323 50.000 0.00 0.00 40.33 5.19
2188 3745 0.099436 GAAGCACGACAATGATGCCC 59.901 55.000 0.00 0.00 40.33 5.36
2189 3746 1.063174 GAGAAGCACGACAATGATGCC 59.937 52.381 0.00 0.00 40.33 4.40
2190 3747 1.063174 GGAGAAGCACGACAATGATGC 59.937 52.381 0.00 0.00 39.74 3.91
2191 3748 2.349590 TGGAGAAGCACGACAATGATG 58.650 47.619 0.00 0.00 0.00 3.07
2192 3749 2.234661 TCTGGAGAAGCACGACAATGAT 59.765 45.455 0.00 0.00 0.00 2.45
2193 3750 1.618343 TCTGGAGAAGCACGACAATGA 59.382 47.619 0.00 0.00 0.00 2.57
2194 3751 2.084610 TCTGGAGAAGCACGACAATG 57.915 50.000 0.00 0.00 0.00 2.82
2195 3752 4.626042 GATATCTGGAGAAGCACGACAAT 58.374 43.478 0.00 0.00 0.00 2.71
2196 3753 3.489229 CGATATCTGGAGAAGCACGACAA 60.489 47.826 0.34 0.00 0.00 3.18
2197 3754 2.033424 CGATATCTGGAGAAGCACGACA 59.967 50.000 0.34 0.00 0.00 4.35
2198 3755 2.033550 ACGATATCTGGAGAAGCACGAC 59.966 50.000 0.34 0.00 0.00 4.34
2199 3756 2.290916 GACGATATCTGGAGAAGCACGA 59.709 50.000 0.34 0.00 0.00 4.35
2200 3757 2.605823 GGACGATATCTGGAGAAGCACG 60.606 54.545 0.34 0.00 0.00 5.34
2201 3758 2.625790 AGGACGATATCTGGAGAAGCAC 59.374 50.000 0.34 0.00 0.00 4.40
2202 3759 2.887783 GAGGACGATATCTGGAGAAGCA 59.112 50.000 0.34 0.00 0.00 3.91
2203 3760 2.230266 GGAGGACGATATCTGGAGAAGC 59.770 54.545 0.34 0.00 0.00 3.86
2204 3761 3.756434 GAGGAGGACGATATCTGGAGAAG 59.244 52.174 0.34 0.00 0.00 2.85
2205 3762 3.396276 AGAGGAGGACGATATCTGGAGAA 59.604 47.826 0.34 0.00 0.00 2.87
2206 3763 2.983192 AGAGGAGGACGATATCTGGAGA 59.017 50.000 0.34 0.00 0.00 3.71
2207 3764 3.081061 CAGAGGAGGACGATATCTGGAG 58.919 54.545 0.34 0.00 34.97 3.86
2208 3765 2.815963 GCAGAGGAGGACGATATCTGGA 60.816 54.545 0.34 0.00 38.24 3.86
2209 3766 1.543802 GCAGAGGAGGACGATATCTGG 59.456 57.143 0.34 0.00 38.24 3.86
2210 3767 1.543802 GGCAGAGGAGGACGATATCTG 59.456 57.143 0.34 0.00 40.26 2.90
2211 3768 1.427368 AGGCAGAGGAGGACGATATCT 59.573 52.381 0.34 0.00 0.00 1.98
2212 3769 1.816224 GAGGCAGAGGAGGACGATATC 59.184 57.143 0.00 0.00 0.00 1.63
2213 3770 1.427368 AGAGGCAGAGGAGGACGATAT 59.573 52.381 0.00 0.00 0.00 1.63
2214 3771 0.847373 AGAGGCAGAGGAGGACGATA 59.153 55.000 0.00 0.00 0.00 2.92
2215 3772 0.847373 TAGAGGCAGAGGAGGACGAT 59.153 55.000 0.00 0.00 0.00 3.73
2216 3773 0.847373 ATAGAGGCAGAGGAGGACGA 59.153 55.000 0.00 0.00 0.00 4.20
2217 3774 1.243902 GATAGAGGCAGAGGAGGACG 58.756 60.000 0.00 0.00 0.00 4.79
2218 3775 1.960689 GTGATAGAGGCAGAGGAGGAC 59.039 57.143 0.00 0.00 0.00 3.85
2219 3776 1.133325 GGTGATAGAGGCAGAGGAGGA 60.133 57.143 0.00 0.00 0.00 3.71
2220 3777 1.133199 AGGTGATAGAGGCAGAGGAGG 60.133 57.143 0.00 0.00 0.00 4.30
2221 3778 2.238521 GAGGTGATAGAGGCAGAGGAG 58.761 57.143 0.00 0.00 0.00 3.69
2222 3779 1.477740 CGAGGTGATAGAGGCAGAGGA 60.478 57.143 0.00 0.00 0.00 3.71
2223 3780 0.958091 CGAGGTGATAGAGGCAGAGG 59.042 60.000 0.00 0.00 0.00 3.69
2224 3781 1.974265 TCGAGGTGATAGAGGCAGAG 58.026 55.000 0.00 0.00 0.00 3.35
2225 3782 2.092375 TCTTCGAGGTGATAGAGGCAGA 60.092 50.000 0.00 0.00 0.00 4.26
2226 3783 2.293122 CTCTTCGAGGTGATAGAGGCAG 59.707 54.545 2.23 0.00 32.65 4.85
2227 3784 2.302260 CTCTTCGAGGTGATAGAGGCA 58.698 52.381 2.23 0.00 32.65 4.75
2228 3785 1.611491 CCTCTTCGAGGTGATAGAGGC 59.389 57.143 14.09 0.00 44.25 4.70
2239 3796 3.175240 CACGTGCGCCTCTTCGAG 61.175 66.667 4.18 0.00 0.00 4.04
2263 3820 2.789203 GCAGCTCCGCGTTAACGAG 61.789 63.158 31.03 26.71 43.02 4.18
2264 3821 2.807895 GCAGCTCCGCGTTAACGA 60.808 61.111 31.03 9.90 43.02 3.85
2265 3822 3.849953 GGCAGCTCCGCGTTAACG 61.850 66.667 23.40 23.40 43.27 3.18
2266 3823 1.644786 ATTGGCAGCTCCGCGTTAAC 61.645 55.000 4.92 0.00 37.80 2.01
2267 3824 0.108089 TATTGGCAGCTCCGCGTTAA 60.108 50.000 4.92 0.00 37.80 2.01
2268 3825 0.808453 GTATTGGCAGCTCCGCGTTA 60.808 55.000 4.92 0.00 37.80 3.18
2269 3826 2.106683 GTATTGGCAGCTCCGCGTT 61.107 57.895 4.92 0.00 37.80 4.84
2270 3827 2.511600 GTATTGGCAGCTCCGCGT 60.512 61.111 4.92 0.00 37.80 6.01
2271 3828 2.202932 AGTATTGGCAGCTCCGCG 60.203 61.111 0.00 0.00 37.80 6.46
2272 3829 2.240500 CGAGTATTGGCAGCTCCGC 61.241 63.158 9.22 0.00 37.80 5.54
2273 3830 2.240500 GCGAGTATTGGCAGCTCCG 61.241 63.158 9.22 3.14 37.80 4.63
2274 3831 2.240500 CGCGAGTATTGGCAGCTCC 61.241 63.158 0.00 0.00 0.00 4.70
2275 3832 0.598680 ATCGCGAGTATTGGCAGCTC 60.599 55.000 16.66 5.94 0.00 4.09
2276 3833 0.877649 CATCGCGAGTATTGGCAGCT 60.878 55.000 16.66 0.00 0.00 4.24
2277 3834 1.154205 ACATCGCGAGTATTGGCAGC 61.154 55.000 16.66 0.00 0.00 5.25
2278 3835 0.855349 GACATCGCGAGTATTGGCAG 59.145 55.000 16.66 0.00 0.00 4.85
2279 3836 0.869880 CGACATCGCGAGTATTGGCA 60.870 55.000 16.66 0.00 0.00 4.92
2280 3837 1.846648 CGACATCGCGAGTATTGGC 59.153 57.895 16.66 9.35 0.00 4.52
2291 3848 2.961721 CGTCCATGGGCGACATCG 60.962 66.667 34.89 11.75 37.84 3.84
2292 3849 1.592669 CTCGTCCATGGGCGACATC 60.593 63.158 36.39 5.82 37.84 3.06
2293 3850 2.501128 CTCGTCCATGGGCGACAT 59.499 61.111 36.39 0.00 41.57 3.06
2294 3851 4.451150 GCTCGTCCATGGGCGACA 62.451 66.667 36.39 18.62 33.33 4.35
2295 3852 4.451150 TGCTCGTCCATGGGCGAC 62.451 66.667 36.39 29.61 33.33 5.19
2296 3853 4.451150 GTGCTCGTCCATGGGCGA 62.451 66.667 36.96 36.96 35.70 5.54
2297 3854 4.758251 TGTGCTCGTCCATGGGCG 62.758 66.667 32.69 32.69 0.00 6.13
2298 3855 3.127533 GTGTGCTCGTCCATGGGC 61.128 66.667 13.02 9.73 0.00 5.36
2299 3856 2.436646 GGTGTGCTCGTCCATGGG 60.437 66.667 13.02 0.00 0.00 4.00
2300 3857 2.815211 CGGTGTGCTCGTCCATGG 60.815 66.667 4.97 4.97 0.00 3.66
2301 3858 3.490759 GCGGTGTGCTCGTCCATG 61.491 66.667 0.00 0.00 41.73 3.66
2302 3859 4.760047 GGCGGTGTGCTCGTCCAT 62.760 66.667 0.00 0.00 45.43 3.41
2309 3866 0.033366 GAAAATTTGGGCGGTGTGCT 59.967 50.000 0.00 0.00 45.43 4.40
2310 3867 0.249657 TGAAAATTTGGGCGGTGTGC 60.250 50.000 0.00 0.00 45.38 4.57
2311 3868 1.068434 ACTGAAAATTTGGGCGGTGTG 59.932 47.619 0.00 0.00 0.00 3.82
2312 3869 1.408969 ACTGAAAATTTGGGCGGTGT 58.591 45.000 0.00 0.00 0.00 4.16
2313 3870 2.524569 AACTGAAAATTTGGGCGGTG 57.475 45.000 0.00 0.00 0.00 4.94
2314 3871 3.552132 AAAACTGAAAATTTGGGCGGT 57.448 38.095 0.00 0.00 0.00 5.68
2315 3872 4.126437 AGAAAAACTGAAAATTTGGGCGG 58.874 39.130 0.00 0.00 0.00 6.13
2316 3873 5.733226 AAGAAAAACTGAAAATTTGGGCG 57.267 34.783 0.00 0.00 0.00 6.13
2317 3874 7.761409 AGAAAAGAAAAACTGAAAATTTGGGC 58.239 30.769 0.00 0.00 0.00 5.36
2324 3881 9.685828 TCTCGAAAAGAAAAGAAAAACTGAAAA 57.314 25.926 0.00 0.00 0.00 2.29
2325 3882 9.685828 TTCTCGAAAAGAAAAGAAAAACTGAAA 57.314 25.926 0.00 0.00 41.10 2.69
2326 3883 9.341899 CTTCTCGAAAAGAAAAGAAAAACTGAA 57.658 29.630 0.00 0.00 43.39 3.02
2327 3884 8.512138 ACTTCTCGAAAAGAAAAGAAAAACTGA 58.488 29.630 5.28 0.00 43.39 3.41
2328 3885 8.675040 ACTTCTCGAAAAGAAAAGAAAAACTG 57.325 30.769 5.28 0.00 43.39 3.16
2331 3888 9.730420 CCATACTTCTCGAAAAGAAAAGAAAAA 57.270 29.630 5.28 0.00 43.39 1.94
2332 3889 8.899771 ACCATACTTCTCGAAAAGAAAAGAAAA 58.100 29.630 5.28 0.00 43.39 2.29
2333 3890 8.446599 ACCATACTTCTCGAAAAGAAAAGAAA 57.553 30.769 5.28 0.00 43.39 2.52
2334 3891 8.342634 CAACCATACTTCTCGAAAAGAAAAGAA 58.657 33.333 5.28 0.00 43.39 2.52
2335 3892 7.497909 ACAACCATACTTCTCGAAAAGAAAAGA 59.502 33.333 5.28 0.00 43.39 2.52
2336 3893 7.587757 CACAACCATACTTCTCGAAAAGAAAAG 59.412 37.037 5.28 0.00 43.39 2.27
2337 3894 7.414436 CACAACCATACTTCTCGAAAAGAAAA 58.586 34.615 5.28 0.00 43.39 2.29
2338 3895 6.512741 GCACAACCATACTTCTCGAAAAGAAA 60.513 38.462 5.28 0.00 43.39 2.52
2339 3896 5.049680 GCACAACCATACTTCTCGAAAAGAA 60.050 40.000 5.28 0.00 41.81 2.52
2340 3897 4.451096 GCACAACCATACTTCTCGAAAAGA 59.549 41.667 5.28 0.00 0.00 2.52
2341 3898 4.452455 AGCACAACCATACTTCTCGAAAAG 59.548 41.667 0.00 0.00 0.00 2.27
2342 3899 4.385825 AGCACAACCATACTTCTCGAAAA 58.614 39.130 0.00 0.00 0.00 2.29
2343 3900 4.002906 AGCACAACCATACTTCTCGAAA 57.997 40.909 0.00 0.00 0.00 3.46
2344 3901 3.678056 AGCACAACCATACTTCTCGAA 57.322 42.857 0.00 0.00 0.00 3.71
2345 3902 3.678056 AAGCACAACCATACTTCTCGA 57.322 42.857 0.00 0.00 0.00 4.04
2346 3903 3.125316 GGAAAGCACAACCATACTTCTCG 59.875 47.826 0.00 0.00 0.00 4.04
2347 3904 3.125316 CGGAAAGCACAACCATACTTCTC 59.875 47.826 0.00 0.00 0.00 2.87
2348 3905 3.074412 CGGAAAGCACAACCATACTTCT 58.926 45.455 0.00 0.00 0.00 2.85
2349 3906 3.471495 CGGAAAGCACAACCATACTTC 57.529 47.619 0.00 0.00 0.00 3.01
2362 3919 0.450184 TATTTGCTTCCGCGGAAAGC 59.550 50.000 37.62 36.19 43.95 3.51
2363 3920 2.097466 ACATATTTGCTTCCGCGGAAAG 59.903 45.455 37.62 30.06 39.65 2.62
2364 3921 2.088423 ACATATTTGCTTCCGCGGAAA 58.912 42.857 37.62 25.32 39.65 3.13
2365 3922 1.745232 ACATATTTGCTTCCGCGGAA 58.255 45.000 36.44 36.44 39.65 4.30
2366 3923 2.159014 AGTACATATTTGCTTCCGCGGA 60.159 45.455 27.28 27.28 39.65 5.54
2367 3924 2.210116 AGTACATATTTGCTTCCGCGG 58.790 47.619 22.12 22.12 39.65 6.46
2368 3925 3.555956 AGAAGTACATATTTGCTTCCGCG 59.444 43.478 13.96 0.00 38.37 6.46
2369 3926 6.423905 TCATAGAAGTACATATTTGCTTCCGC 59.576 38.462 13.96 0.00 38.37 5.54
2370 3927 7.946655 TCATAGAAGTACATATTTGCTTCCG 57.053 36.000 13.96 5.85 38.37 4.30
2371 3928 9.494271 TGATCATAGAAGTACATATTTGCTTCC 57.506 33.333 13.96 1.82 38.37 3.46
2374 3931 9.445878 CCATGATCATAGAAGTACATATTTGCT 57.554 33.333 8.15 0.00 0.00 3.91
2375 3932 9.440773 TCCATGATCATAGAAGTACATATTTGC 57.559 33.333 8.15 0.00 0.00 3.68
2400 3957 7.867445 TTCGAGCAGGAAAATTTTGTATTTC 57.133 32.000 8.47 0.37 35.33 2.17
2401 3958 8.655651 TTTTCGAGCAGGAAAATTTTGTATTT 57.344 26.923 8.47 0.00 40.07 1.40
2411 3968 7.437748 TGGATTTTTATTTTCGAGCAGGAAAA 58.562 30.769 14.66 14.66 46.47 2.29
2412 3969 6.987386 TGGATTTTTATTTTCGAGCAGGAAA 58.013 32.000 0.00 0.00 34.28 3.13
2413 3970 6.582677 TGGATTTTTATTTTCGAGCAGGAA 57.417 33.333 0.00 0.00 0.00 3.36
2414 3971 6.563422 CATGGATTTTTATTTTCGAGCAGGA 58.437 36.000 0.00 0.00 0.00 3.86
2415 3972 5.232838 GCATGGATTTTTATTTTCGAGCAGG 59.767 40.000 0.00 0.00 0.00 4.85
2416 3973 5.806502 TGCATGGATTTTTATTTTCGAGCAG 59.193 36.000 0.00 0.00 0.00 4.24
2417 3974 5.718146 TGCATGGATTTTTATTTTCGAGCA 58.282 33.333 0.00 0.00 0.00 4.26
2418 3975 6.645700 TTGCATGGATTTTTATTTTCGAGC 57.354 33.333 0.00 0.00 0.00 5.03
2419 3976 8.924691 TCTTTTGCATGGATTTTTATTTTCGAG 58.075 29.630 0.00 0.00 0.00 4.04
2420 3977 8.824159 TCTTTTGCATGGATTTTTATTTTCGA 57.176 26.923 0.00 0.00 0.00 3.71
2426 3983 9.387257 GGAGAAATCTTTTGCATGGATTTTTAT 57.613 29.630 17.15 10.40 39.02 1.40
2427 3984 8.373981 TGGAGAAATCTTTTGCATGGATTTTTA 58.626 29.630 17.15 7.24 39.02 1.52
2428 3985 7.225725 TGGAGAAATCTTTTGCATGGATTTTT 58.774 30.769 17.15 13.71 39.02 1.94
2429 3986 6.771573 TGGAGAAATCTTTTGCATGGATTTT 58.228 32.000 17.15 10.74 39.02 1.82
2430 3987 6.363167 TGGAGAAATCTTTTGCATGGATTT 57.637 33.333 16.49 16.49 40.80 2.17
2431 3988 6.555463 ATGGAGAAATCTTTTGCATGGATT 57.445 33.333 0.00 0.00 0.00 3.01
2432 3989 7.418254 GGTTATGGAGAAATCTTTTGCATGGAT 60.418 37.037 0.00 0.00 0.00 3.41
2433 3990 6.127366 GGTTATGGAGAAATCTTTTGCATGGA 60.127 38.462 0.00 0.00 0.00 3.41
2434 3991 6.044682 GGTTATGGAGAAATCTTTTGCATGG 58.955 40.000 0.00 0.00 0.00 3.66
2435 3992 6.870769 AGGTTATGGAGAAATCTTTTGCATG 58.129 36.000 0.00 0.00 0.00 4.06
2436 3993 8.593945 TTAGGTTATGGAGAAATCTTTTGCAT 57.406 30.769 0.00 0.00 0.00 3.96
2437 3994 7.888021 TCTTAGGTTATGGAGAAATCTTTTGCA 59.112 33.333 0.00 0.00 0.00 4.08
2438 3995 8.281212 TCTTAGGTTATGGAGAAATCTTTTGC 57.719 34.615 0.00 0.00 0.00 3.68
2443 4000 9.244292 GGTTTTTCTTAGGTTATGGAGAAATCT 57.756 33.333 0.00 0.00 37.79 2.40
2444 4001 9.020731 TGGTTTTTCTTAGGTTATGGAGAAATC 57.979 33.333 0.00 0.00 37.79 2.17
2445 4002 8.950007 TGGTTTTTCTTAGGTTATGGAGAAAT 57.050 30.769 0.00 0.00 37.79 2.17
2446 4003 8.770010 TTGGTTTTTCTTAGGTTATGGAGAAA 57.230 30.769 0.00 0.00 36.61 2.52
2447 4004 8.802267 CATTGGTTTTTCTTAGGTTATGGAGAA 58.198 33.333 0.00 0.00 0.00 2.87
2448 4005 8.167392 TCATTGGTTTTTCTTAGGTTATGGAGA 58.833 33.333 0.00 0.00 0.00 3.71
2449 4006 8.348285 TCATTGGTTTTTCTTAGGTTATGGAG 57.652 34.615 0.00 0.00 0.00 3.86
2450 4007 8.713708 TTCATTGGTTTTTCTTAGGTTATGGA 57.286 30.769 0.00 0.00 0.00 3.41
2451 4008 9.771534 TTTTCATTGGTTTTTCTTAGGTTATGG 57.228 29.630 0.00 0.00 0.00 2.74
2454 4011 9.685828 CGATTTTCATTGGTTTTTCTTAGGTTA 57.314 29.630 0.00 0.00 0.00 2.85
2455 4012 8.417884 TCGATTTTCATTGGTTTTTCTTAGGTT 58.582 29.630 0.00 0.00 0.00 3.50
2456 4013 7.947282 TCGATTTTCATTGGTTTTTCTTAGGT 58.053 30.769 0.00 0.00 0.00 3.08
2457 4014 8.810652 TTCGATTTTCATTGGTTTTTCTTAGG 57.189 30.769 0.00 0.00 0.00 2.69
2460 4017 9.377312 TCTTTTCGATTTTCATTGGTTTTTCTT 57.623 25.926 0.00 0.00 0.00 2.52
2461 4018 8.817100 GTCTTTTCGATTTTCATTGGTTTTTCT 58.183 29.630 0.00 0.00 0.00 2.52
2462 4019 8.599774 TGTCTTTTCGATTTTCATTGGTTTTTC 58.400 29.630 0.00 0.00 0.00 2.29
2463 4020 8.485976 TGTCTTTTCGATTTTCATTGGTTTTT 57.514 26.923 0.00 0.00 0.00 1.94
2464 4021 8.485976 TTGTCTTTTCGATTTTCATTGGTTTT 57.514 26.923 0.00 0.00 0.00 2.43
2465 4022 8.485976 TTTGTCTTTTCGATTTTCATTGGTTT 57.514 26.923 0.00 0.00 0.00 3.27
2466 4023 8.485976 TTTTGTCTTTTCGATTTTCATTGGTT 57.514 26.923 0.00 0.00 0.00 3.67
2467 4024 8.485976 TTTTTGTCTTTTCGATTTTCATTGGT 57.514 26.923 0.00 0.00 0.00 3.67
2498 4055 4.657436 TTGTATGTGCTTTCGGGTTTTT 57.343 36.364 0.00 0.00 0.00 1.94
2499 4056 4.339814 TCTTTGTATGTGCTTTCGGGTTTT 59.660 37.500 0.00 0.00 0.00 2.43
2500 4057 3.886505 TCTTTGTATGTGCTTTCGGGTTT 59.113 39.130 0.00 0.00 0.00 3.27
2501 4058 3.482436 TCTTTGTATGTGCTTTCGGGTT 58.518 40.909 0.00 0.00 0.00 4.11
2502 4059 3.134574 TCTTTGTATGTGCTTTCGGGT 57.865 42.857 0.00 0.00 0.00 5.28
2503 4060 3.941483 AGATCTTTGTATGTGCTTTCGGG 59.059 43.478 0.00 0.00 0.00 5.14
2504 4061 6.042777 TCTAGATCTTTGTATGTGCTTTCGG 58.957 40.000 0.00 0.00 0.00 4.30
2505 4062 6.199908 CCTCTAGATCTTTGTATGTGCTTTCG 59.800 42.308 0.00 0.00 0.00 3.46
2506 4063 7.268586 TCCTCTAGATCTTTGTATGTGCTTTC 58.731 38.462 0.00 0.00 0.00 2.62
2507 4064 7.187824 TCCTCTAGATCTTTGTATGTGCTTT 57.812 36.000 0.00 0.00 0.00 3.51
2508 4065 6.798427 TCCTCTAGATCTTTGTATGTGCTT 57.202 37.500 0.00 0.00 0.00 3.91
2509 4066 6.685116 GCTTCCTCTAGATCTTTGTATGTGCT 60.685 42.308 0.00 0.00 0.00 4.40
2510 4067 5.465056 GCTTCCTCTAGATCTTTGTATGTGC 59.535 44.000 0.00 0.00 0.00 4.57
2511 4068 6.478344 GTGCTTCCTCTAGATCTTTGTATGTG 59.522 42.308 0.00 0.00 0.00 3.21
2512 4069 6.407525 GGTGCTTCCTCTAGATCTTTGTATGT 60.408 42.308 0.00 0.00 0.00 2.29
2513 4070 5.988561 GGTGCTTCCTCTAGATCTTTGTATG 59.011 44.000 0.00 0.00 0.00 2.39
2514 4071 5.071115 GGGTGCTTCCTCTAGATCTTTGTAT 59.929 44.000 0.00 0.00 36.25 2.29
2515 4072 4.406003 GGGTGCTTCCTCTAGATCTTTGTA 59.594 45.833 0.00 0.00 36.25 2.41
2516 4073 3.198853 GGGTGCTTCCTCTAGATCTTTGT 59.801 47.826 0.00 0.00 36.25 2.83
2517 4074 3.198635 TGGGTGCTTCCTCTAGATCTTTG 59.801 47.826 0.00 0.00 36.25 2.77
2518 4075 3.454858 TGGGTGCTTCCTCTAGATCTTT 58.545 45.455 0.00 0.00 36.25 2.52
2519 4076 3.121929 TGGGTGCTTCCTCTAGATCTT 57.878 47.619 0.00 0.00 36.25 2.40
2520 4077 2.769095 GTTGGGTGCTTCCTCTAGATCT 59.231 50.000 0.00 0.00 36.25 2.75
2521 4078 2.501723 TGTTGGGTGCTTCCTCTAGATC 59.498 50.000 0.00 0.00 36.25 2.75
2522 4079 2.237392 GTGTTGGGTGCTTCCTCTAGAT 59.763 50.000 0.00 0.00 36.25 1.98
2523 4080 1.623811 GTGTTGGGTGCTTCCTCTAGA 59.376 52.381 0.00 0.00 36.25 2.43
2524 4081 1.347707 TGTGTTGGGTGCTTCCTCTAG 59.652 52.381 0.00 0.00 36.25 2.43
2525 4082 1.429930 TGTGTTGGGTGCTTCCTCTA 58.570 50.000 0.00 0.00 36.25 2.43
2526 4083 0.773644 ATGTGTTGGGTGCTTCCTCT 59.226 50.000 0.00 0.00 36.25 3.69
2527 4084 0.883833 CATGTGTTGGGTGCTTCCTC 59.116 55.000 0.00 0.00 36.25 3.71
2528 4085 0.478072 TCATGTGTTGGGTGCTTCCT 59.522 50.000 0.00 0.00 36.25 3.36
2529 4086 1.327303 TTCATGTGTTGGGTGCTTCC 58.673 50.000 0.00 0.00 0.00 3.46
2530 4087 3.451141 TTTTCATGTGTTGGGTGCTTC 57.549 42.857 0.00 0.00 0.00 3.86
2531 4088 3.902881 TTTTTCATGTGTTGGGTGCTT 57.097 38.095 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.