Multiple sequence alignment - TraesCS7A01G054400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G054400 chr7A 100.000 2740 0 0 1 2740 26319570 26316831 0.000000e+00 5060.0
1 TraesCS7A01G054400 chr7A 93.467 398 18 2 2236 2633 43017495 43017884 3.930000e-163 584.0
2 TraesCS7A01G054400 chr7A 90.164 366 29 6 2236 2597 66692647 66692285 1.150000e-128 470.0
3 TraesCS7A01G054400 chr7A 93.038 158 6 3 301 457 26319113 26318960 2.750000e-55 226.0
4 TraesCS7A01G054400 chr7A 93.038 158 6 3 458 611 26319270 26319114 2.750000e-55 226.0
5 TraesCS7A01G054400 chr7A 85.806 155 19 3 721 873 709590336 709590489 7.850000e-36 161.0
6 TraesCS7A01G054400 chr7A 74.334 413 62 22 77 457 26301927 26301527 4.760000e-28 135.0
7 TraesCS7A01G054400 chr7A 77.841 176 20 8 458 621 26301685 26301517 1.040000e-14 91.6
8 TraesCS7A01G054400 chr7D 88.889 855 47 13 877 1686 25357272 25356421 0.000000e+00 1009.0
9 TraesCS7A01G054400 chr7D 86.081 467 35 10 1 457 25357741 25357295 2.470000e-130 475.0
10 TraesCS7A01G054400 chr7D 87.437 199 14 5 265 457 25353685 25353492 4.590000e-53 219.0
11 TraesCS7A01G054400 chr7D 91.447 152 11 2 723 872 6747256 6747407 9.940000e-50 207.0
12 TraesCS7A01G054400 chr7D 74.593 492 72 30 1 457 25351668 25351195 1.690000e-37 167.0
13 TraesCS7A01G054400 chr7D 84.659 176 15 4 458 625 25353649 25353478 6.070000e-37 165.0
14 TraesCS7A01G054400 chr7D 86.164 159 11 4 491 640 25357422 25357266 7.850000e-36 161.0
15 TraesCS7A01G054400 chr7D 84.431 167 23 3 721 884 28440774 28440608 7.850000e-36 161.0
16 TraesCS7A01G054400 chr7D 95.122 82 3 1 640 720 6747408 6747327 7.960000e-26 128.0
17 TraesCS7A01G054400 chr7D 93.827 81 4 1 641 720 75807932 75807852 1.330000e-23 121.0
18 TraesCS7A01G054400 chr4A 90.291 721 31 11 991 1675 702009123 702009840 0.000000e+00 907.0
19 TraesCS7A01G054400 chr4A 87.913 786 42 17 928 1675 709858333 709857563 0.000000e+00 876.0
20 TraesCS7A01G054400 chr4A 91.479 399 30 3 2235 2633 603516725 603516331 1.860000e-151 545.0
21 TraesCS7A01G054400 chr4A 87.391 460 46 9 1 457 702008248 702008698 4.040000e-143 518.0
22 TraesCS7A01G054400 chr4A 89.785 186 9 5 458 637 702008543 702008724 2.120000e-56 230.0
23 TraesCS7A01G054400 chr4A 86.957 207 24 2 153 359 709859289 709859086 2.120000e-56 230.0
24 TraesCS7A01G054400 chr4A 92.958 142 7 3 2001 2141 709856400 709856261 1.290000e-48 204.0
25 TraesCS7A01G054400 chr4A 94.118 119 7 0 874 992 702008718 702008836 6.030000e-42 182.0
26 TraesCS7A01G054400 chr4A 94.286 105 2 3 355 457 709858786 709858684 1.020000e-34 158.0
27 TraesCS7A01G054400 chr4A 85.256 156 17 6 721 873 498990942 498990790 3.650000e-34 156.0
28 TraesCS7A01G054400 chr4A 78.235 170 18 8 463 621 709849170 709849009 1.040000e-14 91.6
29 TraesCS7A01G054400 chr4A 91.071 56 3 1 877 930 709858661 709858606 1.050000e-09 75.0
30 TraesCS7A01G054400 chr4A 85.915 71 3 3 393 457 709852264 709852195 4.900000e-08 69.4
31 TraesCS7A01G054400 chr5A 94.724 398 20 1 2236 2633 675563987 675563591 3.880000e-173 617.0
32 TraesCS7A01G054400 chr5A 83.333 150 19 6 721 867 641594953 641594807 1.710000e-27 134.0
33 TraesCS7A01G054400 chr5A 91.111 45 0 4 71 113 304170343 304170385 1.060000e-04 58.4
34 TraesCS7A01G054400 chr4B 88.350 412 31 9 2230 2633 472739990 472739588 1.910000e-131 479.0
35 TraesCS7A01G054400 chr4B 90.196 153 12 3 721 872 18701905 18701755 2.150000e-46 196.0
36 TraesCS7A01G054400 chr5B 88.778 401 27 10 2233 2633 382215613 382215995 2.470000e-130 475.0
37 TraesCS7A01G054400 chr5B 91.304 46 0 4 70 113 280274428 280274471 2.950000e-05 60.2
38 TraesCS7A01G054400 chr4D 86.967 399 35 5 2236 2633 282907998 282907616 1.510000e-117 433.0
39 TraesCS7A01G054400 chr4D 91.822 269 17 4 2349 2617 467756332 467756069 1.200000e-98 370.0
40 TraesCS7A01G054400 chr7B 87.131 373 33 7 2261 2633 746714047 746713690 2.540000e-110 409.0
41 TraesCS7A01G054400 chr7B 91.304 46 0 4 70 113 467919512 467919469 2.950000e-05 60.2
42 TraesCS7A01G054400 chr2D 92.115 279 20 2 2234 2512 168232022 168231746 2.560000e-105 392.0
43 TraesCS7A01G054400 chr2A 93.953 215 13 0 2345 2559 182314543 182314757 2.630000e-85 326.0
44 TraesCS7A01G054400 chr2A 91.597 119 7 2 2234 2352 182313792 182313907 7.850000e-36 161.0
45 TraesCS7A01G054400 chr2A 90.196 51 4 1 70 119 670676697 670676747 6.330000e-07 65.8
46 TraesCS7A01G054400 chr3A 94.253 174 6 2 2236 2409 663573407 663573238 2.090000e-66 263.0
47 TraesCS7A01G054400 chr3A 83.226 155 21 5 721 872 719267125 719266973 1.320000e-28 137.0
48 TraesCS7A01G054400 chr6D 85.256 156 21 2 721 874 468870395 468870240 2.820000e-35 159.0
49 TraesCS7A01G054400 chr6A 84.906 159 18 6 720 874 572404969 572404813 3.650000e-34 156.0
50 TraesCS7A01G054400 chr6A 91.566 83 6 1 638 719 572404812 572404894 2.230000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G054400 chr7A 26316831 26319570 2739 True 1837.333333 5060 95.358667 1 2740 3 chr7A.!!$R3 2739
1 TraesCS7A01G054400 chr7D 25351195 25357741 6546 True 366.000000 1009 84.637167 1 1686 6 chr7D.!!$R4 1685
2 TraesCS7A01G054400 chr4A 702008248 702009840 1592 False 459.250000 907 90.396250 1 1675 4 chr4A.!!$F1 1674
3 TraesCS7A01G054400 chr4A 709849009 709859289 10280 True 243.428571 876 88.190714 153 2141 7 chr4A.!!$R3 1988
4 TraesCS7A01G054400 chr2A 182313792 182314757 965 False 243.500000 326 92.775000 2234 2559 2 chr2A.!!$F2 325

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
557 870 0.106708 TCTATGCCAGGAATCGTGCC 59.893 55.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2141 3941 0.336737 AGCTCCTACTGCTACCCACT 59.663 55.0 0.0 0.0 39.21 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.709145 TTCTATTGCAAATTCATGTGTTGC 57.291 33.333 17.88 17.88 46.21 4.17
63 64 5.982356 TCTATTATGGCATATGCTGTCCTC 58.018 41.667 26.12 9.79 41.70 3.71
72 73 2.653234 ATGCTGTCCTCATCCATTCC 57.347 50.000 0.00 0.00 0.00 3.01
82 83 3.073503 CCTCATCCATTCCTATTCCTGCA 59.926 47.826 0.00 0.00 0.00 4.41
84 85 5.322754 CTCATCCATTCCTATTCCTGCATT 58.677 41.667 0.00 0.00 0.00 3.56
101 102 5.457799 CCTGCATTTTTAGAATCATGCGAAG 59.542 40.000 0.00 0.00 44.22 3.79
178 179 3.837731 GGACCAAATGAATTTTCCCTCCA 59.162 43.478 0.00 0.00 0.00 3.86
197 198 3.102204 CCATTCCCTTTTGCTCCAATCT 58.898 45.455 0.00 0.00 0.00 2.40
199 200 4.382362 CCATTCCCTTTTGCTCCAATCTTC 60.382 45.833 0.00 0.00 0.00 2.87
203 204 3.442977 CCCTTTTGCTCCAATCTTCTGAG 59.557 47.826 0.00 0.00 0.00 3.35
228 229 6.844696 AACATATGAATGGTGTCGTCATAC 57.155 37.500 10.38 0.00 37.43 2.39
229 230 5.912892 ACATATGAATGGTGTCGTCATACA 58.087 37.500 10.38 0.00 37.43 2.29
260 265 8.742125 TTATATTCCTATGAATGTCTCCACCT 57.258 34.615 3.72 0.00 41.31 4.00
261 266 5.983333 ATTCCTATGAATGTCTCCACCTT 57.017 39.130 0.00 0.00 39.74 3.50
269 274 9.347240 CTATGAATGTCTCCACCTTTGAAATAT 57.653 33.333 0.00 0.00 0.00 1.28
459 772 2.659897 GCACGGCGCAGATCTAGG 60.660 66.667 16.26 0.00 41.79 3.02
460 773 2.808315 CACGGCGCAGATCTAGGT 59.192 61.111 16.26 0.00 0.00 3.08
461 774 1.141881 CACGGCGCAGATCTAGGTT 59.858 57.895 16.26 0.00 0.00 3.50
462 775 0.460284 CACGGCGCAGATCTAGGTTT 60.460 55.000 16.26 0.00 0.00 3.27
463 776 0.249398 ACGGCGCAGATCTAGGTTTT 59.751 50.000 16.26 0.00 0.00 2.43
464 777 0.652592 CGGCGCAGATCTAGGTTTTG 59.347 55.000 10.83 0.00 0.00 2.44
465 778 1.739035 CGGCGCAGATCTAGGTTTTGA 60.739 52.381 10.83 0.00 0.00 2.69
466 779 1.936547 GGCGCAGATCTAGGTTTTGAG 59.063 52.381 10.83 0.00 0.00 3.02
467 780 2.418746 GGCGCAGATCTAGGTTTTGAGA 60.419 50.000 10.83 0.00 0.00 3.27
468 781 2.863137 GCGCAGATCTAGGTTTTGAGAG 59.137 50.000 0.30 0.00 0.00 3.20
469 782 3.429547 GCGCAGATCTAGGTTTTGAGAGA 60.430 47.826 0.30 0.00 0.00 3.10
470 783 4.109050 CGCAGATCTAGGTTTTGAGAGAC 58.891 47.826 0.00 0.00 0.00 3.36
471 784 4.142271 CGCAGATCTAGGTTTTGAGAGACT 60.142 45.833 0.00 0.00 0.00 3.24
472 785 5.623368 CGCAGATCTAGGTTTTGAGAGACTT 60.623 44.000 0.00 0.00 0.00 3.01
473 786 6.169800 GCAGATCTAGGTTTTGAGAGACTTT 58.830 40.000 0.00 0.00 0.00 2.66
474 787 6.312672 GCAGATCTAGGTTTTGAGAGACTTTC 59.687 42.308 0.00 0.00 0.00 2.62
475 788 6.529829 CAGATCTAGGTTTTGAGAGACTTTCG 59.470 42.308 0.00 0.00 0.00 3.46
476 789 6.434652 AGATCTAGGTTTTGAGAGACTTTCGA 59.565 38.462 0.00 0.00 0.00 3.71
477 790 6.015027 TCTAGGTTTTGAGAGACTTTCGAG 57.985 41.667 0.00 0.00 0.00 4.04
478 791 4.674281 AGGTTTTGAGAGACTTTCGAGT 57.326 40.909 0.00 0.00 0.00 4.18
479 792 5.786264 AGGTTTTGAGAGACTTTCGAGTA 57.214 39.130 0.00 0.00 0.00 2.59
480 793 6.158023 AGGTTTTGAGAGACTTTCGAGTAA 57.842 37.500 0.00 0.00 0.00 2.24
481 794 6.760291 AGGTTTTGAGAGACTTTCGAGTAAT 58.240 36.000 0.00 0.00 0.00 1.89
482 795 7.217906 AGGTTTTGAGAGACTTTCGAGTAATT 58.782 34.615 0.00 0.00 0.00 1.40
483 796 8.365647 AGGTTTTGAGAGACTTTCGAGTAATTA 58.634 33.333 0.00 0.00 0.00 1.40
484 797 8.985805 GGTTTTGAGAGACTTTCGAGTAATTAA 58.014 33.333 0.00 0.00 0.00 1.40
487 800 9.923143 TTTGAGAGACTTTCGAGTAATTAATCA 57.077 29.630 12.94 0.00 0.00 2.57
488 801 9.923143 TTGAGAGACTTTCGAGTAATTAATCAA 57.077 29.630 12.94 4.25 0.00 2.57
489 802 9.923143 TGAGAGACTTTCGAGTAATTAATCAAA 57.077 29.630 12.94 10.55 0.00 2.69
507 820 9.621629 TTAATCAAAAGTAAGTGTTCTTCTCCA 57.378 29.630 0.00 0.00 35.36 3.86
508 821 8.697507 AATCAAAAGTAAGTGTTCTTCTCCAT 57.302 30.769 0.00 0.00 35.36 3.41
509 822 7.496529 TCAAAAGTAAGTGTTCTTCTCCATG 57.503 36.000 0.00 0.00 35.36 3.66
510 823 6.486657 TCAAAAGTAAGTGTTCTTCTCCATGG 59.513 38.462 4.97 4.97 35.36 3.66
511 824 5.825593 AAGTAAGTGTTCTTCTCCATGGA 57.174 39.130 15.27 15.27 35.36 3.41
512 825 5.413309 AGTAAGTGTTCTTCTCCATGGAG 57.587 43.478 32.60 32.60 43.21 3.86
527 840 1.549203 TGGAGATCCAAGCCAAAAGC 58.451 50.000 0.00 0.00 44.35 3.51
528 841 1.203038 TGGAGATCCAAGCCAAAAGCA 60.203 47.619 0.00 0.00 44.35 3.91
529 842 1.475682 GGAGATCCAAGCCAAAAGCAG 59.524 52.381 0.00 0.00 39.15 4.24
530 843 2.881403 GGAGATCCAAGCCAAAAGCAGA 60.881 50.000 0.00 0.00 39.15 4.26
531 844 4.375747 GGAGATCCAAGCCAAAAGCAGAA 61.376 47.826 0.00 0.00 39.15 3.02
532 845 5.829223 GGAGATCCAAGCCAAAAGCAGAAA 61.829 45.833 0.00 0.00 39.15 2.52
533 846 7.570280 GGAGATCCAAGCCAAAAGCAGAAAG 62.570 48.000 0.00 0.00 39.15 2.62
539 852 3.018598 GCCAAAAGCAGAAAGAAGGTC 57.981 47.619 0.00 0.00 42.97 3.85
540 853 2.625314 GCCAAAAGCAGAAAGAAGGTCT 59.375 45.455 0.00 0.00 42.97 3.85
541 854 3.821033 GCCAAAAGCAGAAAGAAGGTCTA 59.179 43.478 0.00 0.00 42.97 2.59
542 855 4.460731 GCCAAAAGCAGAAAGAAGGTCTAT 59.539 41.667 0.00 0.00 42.97 1.98
543 856 5.620879 GCCAAAAGCAGAAAGAAGGTCTATG 60.621 44.000 0.00 0.00 42.97 2.23
544 857 5.397326 CAAAAGCAGAAAGAAGGTCTATGC 58.603 41.667 0.00 0.00 33.44 3.14
545 858 3.274095 AGCAGAAAGAAGGTCTATGCC 57.726 47.619 0.00 0.00 33.61 4.40
546 859 2.573462 AGCAGAAAGAAGGTCTATGCCA 59.427 45.455 0.00 0.00 33.61 4.92
547 860 2.941720 GCAGAAAGAAGGTCTATGCCAG 59.058 50.000 0.00 0.00 29.57 4.85
548 861 3.539604 CAGAAAGAAGGTCTATGCCAGG 58.460 50.000 0.00 0.00 0.00 4.45
549 862 3.198635 CAGAAAGAAGGTCTATGCCAGGA 59.801 47.826 0.00 0.00 0.00 3.86
550 863 3.846588 AGAAAGAAGGTCTATGCCAGGAA 59.153 43.478 0.00 0.00 0.00 3.36
551 864 4.476479 AGAAAGAAGGTCTATGCCAGGAAT 59.524 41.667 0.00 0.00 0.00 3.01
552 865 4.429854 AAGAAGGTCTATGCCAGGAATC 57.570 45.455 0.00 0.00 0.00 2.52
553 866 2.366916 AGAAGGTCTATGCCAGGAATCG 59.633 50.000 0.00 0.00 0.00 3.34
554 867 1.794714 AGGTCTATGCCAGGAATCGT 58.205 50.000 0.00 0.00 0.00 3.73
555 868 1.414181 AGGTCTATGCCAGGAATCGTG 59.586 52.381 0.00 0.00 0.00 4.35
556 869 1.221414 GTCTATGCCAGGAATCGTGC 58.779 55.000 0.00 0.00 0.00 5.34
557 870 0.106708 TCTATGCCAGGAATCGTGCC 59.893 55.000 0.00 0.00 0.00 5.01
558 871 0.886490 CTATGCCAGGAATCGTGCCC 60.886 60.000 0.00 0.00 0.00 5.36
559 872 2.658679 TATGCCAGGAATCGTGCCCG 62.659 60.000 0.00 0.00 0.00 6.13
570 883 2.218953 TCGTGCCCGATCAAGATAAC 57.781 50.000 0.00 0.00 38.40 1.89
571 884 1.754803 TCGTGCCCGATCAAGATAACT 59.245 47.619 0.00 0.00 38.40 2.24
572 885 2.953648 TCGTGCCCGATCAAGATAACTA 59.046 45.455 0.00 0.00 38.40 2.24
573 886 3.050619 CGTGCCCGATCAAGATAACTAC 58.949 50.000 0.00 0.00 35.63 2.73
574 887 3.391049 GTGCCCGATCAAGATAACTACC 58.609 50.000 0.00 0.00 0.00 3.18
575 888 3.069729 GTGCCCGATCAAGATAACTACCT 59.930 47.826 0.00 0.00 0.00 3.08
576 889 3.069586 TGCCCGATCAAGATAACTACCTG 59.930 47.826 0.00 0.00 0.00 4.00
577 890 3.654414 CCCGATCAAGATAACTACCTGC 58.346 50.000 0.00 0.00 0.00 4.85
578 891 3.069586 CCCGATCAAGATAACTACCTGCA 59.930 47.826 0.00 0.00 0.00 4.41
579 892 4.262635 CCCGATCAAGATAACTACCTGCAT 60.263 45.833 0.00 0.00 0.00 3.96
580 893 4.687948 CCGATCAAGATAACTACCTGCATG 59.312 45.833 0.00 0.00 0.00 4.06
581 894 5.292765 CGATCAAGATAACTACCTGCATGT 58.707 41.667 0.00 0.00 0.00 3.21
582 895 5.403766 CGATCAAGATAACTACCTGCATGTC 59.596 44.000 0.00 0.00 0.00 3.06
583 896 5.675684 TCAAGATAACTACCTGCATGTCA 57.324 39.130 0.00 0.00 0.00 3.58
584 897 6.048732 TCAAGATAACTACCTGCATGTCAA 57.951 37.500 0.00 0.00 0.00 3.18
585 898 5.874810 TCAAGATAACTACCTGCATGTCAAC 59.125 40.000 0.00 0.00 0.00 3.18
586 899 5.683876 AGATAACTACCTGCATGTCAACT 57.316 39.130 0.00 0.00 0.00 3.16
587 900 6.054860 AGATAACTACCTGCATGTCAACTT 57.945 37.500 0.00 0.00 0.00 2.66
588 901 6.476378 AGATAACTACCTGCATGTCAACTTT 58.524 36.000 0.00 0.00 0.00 2.66
589 902 4.836125 AACTACCTGCATGTCAACTTTG 57.164 40.909 0.00 0.00 0.00 2.77
590 903 3.820557 ACTACCTGCATGTCAACTTTGT 58.179 40.909 0.00 0.00 0.00 2.83
591 904 4.968259 ACTACCTGCATGTCAACTTTGTA 58.032 39.130 0.00 0.00 0.00 2.41
592 905 5.373222 ACTACCTGCATGTCAACTTTGTAA 58.627 37.500 0.00 0.00 0.00 2.41
593 906 4.568152 ACCTGCATGTCAACTTTGTAAC 57.432 40.909 0.00 0.00 0.00 2.50
594 907 3.951037 ACCTGCATGTCAACTTTGTAACA 59.049 39.130 0.00 0.00 0.00 2.41
595 908 4.584325 ACCTGCATGTCAACTTTGTAACAT 59.416 37.500 0.00 0.00 0.00 2.71
596 909 4.919168 CCTGCATGTCAACTTTGTAACATG 59.081 41.667 14.87 14.87 38.27 3.21
599 912 5.811018 CATGTCAACTTTGTAACATGCAC 57.189 39.130 9.57 0.00 0.00 4.57
600 913 3.946402 TGTCAACTTTGTAACATGCACG 58.054 40.909 0.00 0.00 0.00 5.34
601 914 3.242903 TGTCAACTTTGTAACATGCACGG 60.243 43.478 0.00 0.00 0.00 4.94
602 915 2.946329 TCAACTTTGTAACATGCACGGT 59.054 40.909 0.00 0.00 0.00 4.83
603 916 3.042189 CAACTTTGTAACATGCACGGTG 58.958 45.455 3.15 3.15 0.00 4.94
604 917 1.001815 ACTTTGTAACATGCACGGTGC 60.002 47.619 25.55 25.55 45.29 5.01
628 941 1.895798 TCTCGAGATGCAACTTGAGGT 59.104 47.619 30.54 0.00 44.27 3.85
637 950 6.109359 AGATGCAACTTGAGGTATTCTACAC 58.891 40.000 0.00 0.00 0.00 2.90
638 951 5.222079 TGCAACTTGAGGTATTCTACACA 57.778 39.130 0.00 0.00 0.00 3.72
639 952 5.237815 TGCAACTTGAGGTATTCTACACAG 58.762 41.667 0.00 0.00 0.00 3.66
640 953 4.631813 GCAACTTGAGGTATTCTACACAGG 59.368 45.833 0.00 0.00 0.00 4.00
641 954 5.568825 GCAACTTGAGGTATTCTACACAGGA 60.569 44.000 0.00 0.00 0.00 3.86
642 955 5.923733 ACTTGAGGTATTCTACACAGGAG 57.076 43.478 0.00 0.00 0.00 3.69
643 956 5.334421 ACTTGAGGTATTCTACACAGGAGT 58.666 41.667 0.00 0.00 0.00 3.85
644 957 6.491383 ACTTGAGGTATTCTACACAGGAGTA 58.509 40.000 0.00 0.00 0.00 2.59
645 958 6.952358 ACTTGAGGTATTCTACACAGGAGTAA 59.048 38.462 0.00 0.00 0.00 2.24
646 959 7.620094 ACTTGAGGTATTCTACACAGGAGTAAT 59.380 37.037 0.00 0.00 0.00 1.89
647 960 7.348080 TGAGGTATTCTACACAGGAGTAATG 57.652 40.000 0.00 0.00 0.00 1.90
648 961 6.163135 AGGTATTCTACACAGGAGTAATGC 57.837 41.667 0.00 0.00 0.00 3.56
649 962 5.900123 AGGTATTCTACACAGGAGTAATGCT 59.100 40.000 0.00 0.00 0.00 3.79
650 963 7.067421 AGGTATTCTACACAGGAGTAATGCTA 58.933 38.462 0.00 0.00 0.00 3.49
651 964 7.014422 AGGTATTCTACACAGGAGTAATGCTAC 59.986 40.741 0.00 0.00 0.00 3.58
652 965 6.791867 ATTCTACACAGGAGTAATGCTACA 57.208 37.500 0.00 0.00 0.00 2.74
653 966 6.791867 TTCTACACAGGAGTAATGCTACAT 57.208 37.500 0.00 0.00 0.00 2.29
654 967 7.891498 TTCTACACAGGAGTAATGCTACATA 57.109 36.000 0.00 0.00 0.00 2.29
655 968 8.478775 TTCTACACAGGAGTAATGCTACATAT 57.521 34.615 0.00 0.00 0.00 1.78
656 969 9.582648 TTCTACACAGGAGTAATGCTACATATA 57.417 33.333 0.00 0.00 0.00 0.86
657 970 9.011095 TCTACACAGGAGTAATGCTACATATAC 57.989 37.037 0.00 0.00 0.00 1.47
658 971 7.597288 ACACAGGAGTAATGCTACATATACA 57.403 36.000 0.00 0.00 0.00 2.29
659 972 8.195165 ACACAGGAGTAATGCTACATATACAT 57.805 34.615 0.00 0.00 0.00 2.29
660 973 9.309224 ACACAGGAGTAATGCTACATATACATA 57.691 33.333 0.00 0.00 0.00 2.29
661 974 9.794685 CACAGGAGTAATGCTACATATACATAG 57.205 37.037 0.00 0.00 0.00 2.23
662 975 9.755122 ACAGGAGTAATGCTACATATACATAGA 57.245 33.333 0.00 0.00 0.00 1.98
671 984 9.803315 ATGCTACATATACATAGATTTACACGG 57.197 33.333 0.00 0.00 0.00 4.94
672 985 8.248253 TGCTACATATACATAGATTTACACGGG 58.752 37.037 0.00 0.00 0.00 5.28
673 986 8.248945 GCTACATATACATAGATTTACACGGGT 58.751 37.037 0.00 0.00 0.00 5.28
676 989 9.841295 ACATATACATAGATTTACACGGGTTTT 57.159 29.630 0.00 0.00 0.00 2.43
680 993 7.982761 ACATAGATTTACACGGGTTTTACAA 57.017 32.000 0.00 0.00 0.00 2.41
681 994 8.393671 ACATAGATTTACACGGGTTTTACAAA 57.606 30.769 0.00 0.00 0.00 2.83
682 995 8.291740 ACATAGATTTACACGGGTTTTACAAAC 58.708 33.333 0.00 0.00 0.00 2.93
683 996 6.696441 AGATTTACACGGGTTTTACAAACA 57.304 33.333 0.00 0.00 0.00 2.83
684 997 6.731164 AGATTTACACGGGTTTTACAAACAG 58.269 36.000 0.00 0.00 0.00 3.16
685 998 6.543100 AGATTTACACGGGTTTTACAAACAGA 59.457 34.615 0.00 0.00 0.00 3.41
686 999 6.696441 TTTACACGGGTTTTACAAACAGAT 57.304 33.333 0.00 0.00 0.00 2.90
687 1000 4.561735 ACACGGGTTTTACAAACAGATG 57.438 40.909 0.00 0.00 0.00 2.90
688 1001 4.200874 ACACGGGTTTTACAAACAGATGA 58.799 39.130 0.00 0.00 0.00 2.92
689 1002 4.274950 ACACGGGTTTTACAAACAGATGAG 59.725 41.667 0.00 0.00 0.00 2.90
690 1003 4.274950 CACGGGTTTTACAAACAGATGAGT 59.725 41.667 2.00 0.00 0.00 3.41
691 1004 4.885325 ACGGGTTTTACAAACAGATGAGTT 59.115 37.500 2.00 0.00 0.00 3.01
692 1005 5.358725 ACGGGTTTTACAAACAGATGAGTTT 59.641 36.000 2.00 0.00 42.10 2.66
693 1006 6.127563 ACGGGTTTTACAAACAGATGAGTTTT 60.128 34.615 2.00 0.00 39.55 2.43
694 1007 6.198216 CGGGTTTTACAAACAGATGAGTTTTG 59.802 38.462 2.00 0.00 39.55 2.44
695 1008 7.262048 GGGTTTTACAAACAGATGAGTTTTGA 58.738 34.615 2.00 0.00 39.55 2.69
696 1009 7.926018 GGGTTTTACAAACAGATGAGTTTTGAT 59.074 33.333 2.00 0.00 39.55 2.57
697 1010 9.313118 GGTTTTACAAACAGATGAGTTTTGATT 57.687 29.630 2.00 0.00 39.55 2.57
699 1012 8.870160 TTTACAAACAGATGAGTTTTGATTGG 57.130 30.769 0.52 0.00 39.55 3.16
700 1013 6.713762 ACAAACAGATGAGTTTTGATTGGA 57.286 33.333 0.52 0.00 39.55 3.53
701 1014 6.742109 ACAAACAGATGAGTTTTGATTGGAG 58.258 36.000 0.52 0.00 39.55 3.86
702 1015 6.547141 ACAAACAGATGAGTTTTGATTGGAGA 59.453 34.615 0.52 0.00 39.55 3.71
703 1016 7.232127 ACAAACAGATGAGTTTTGATTGGAGAT 59.768 33.333 0.52 0.00 39.55 2.75
704 1017 7.771927 AACAGATGAGTTTTGATTGGAGATT 57.228 32.000 0.00 0.00 0.00 2.40
705 1018 8.868522 AACAGATGAGTTTTGATTGGAGATTA 57.131 30.769 0.00 0.00 0.00 1.75
706 1019 9.471702 AACAGATGAGTTTTGATTGGAGATTAT 57.528 29.630 0.00 0.00 0.00 1.28
707 1020 8.900781 ACAGATGAGTTTTGATTGGAGATTATG 58.099 33.333 0.00 0.00 0.00 1.90
708 1021 8.350722 CAGATGAGTTTTGATTGGAGATTATGG 58.649 37.037 0.00 0.00 0.00 2.74
709 1022 7.504911 AGATGAGTTTTGATTGGAGATTATGGG 59.495 37.037 0.00 0.00 0.00 4.00
710 1023 5.893255 TGAGTTTTGATTGGAGATTATGGGG 59.107 40.000 0.00 0.00 0.00 4.96
711 1024 6.091076 AGTTTTGATTGGAGATTATGGGGA 57.909 37.500 0.00 0.00 0.00 4.81
712 1025 6.502138 AGTTTTGATTGGAGATTATGGGGAA 58.498 36.000 0.00 0.00 0.00 3.97
713 1026 6.608808 AGTTTTGATTGGAGATTATGGGGAAG 59.391 38.462 0.00 0.00 0.00 3.46
714 1027 5.992564 TTGATTGGAGATTATGGGGAAGA 57.007 39.130 0.00 0.00 0.00 2.87
715 1028 5.573380 TGATTGGAGATTATGGGGAAGAG 57.427 43.478 0.00 0.00 0.00 2.85
716 1029 4.352001 TGATTGGAGATTATGGGGAAGAGG 59.648 45.833 0.00 0.00 0.00 3.69
717 1030 2.706350 TGGAGATTATGGGGAAGAGGG 58.294 52.381 0.00 0.00 0.00 4.30
718 1031 1.988846 GGAGATTATGGGGAAGAGGGG 59.011 57.143 0.00 0.00 0.00 4.79
719 1032 1.352687 GAGATTATGGGGAAGAGGGGC 59.647 57.143 0.00 0.00 0.00 5.80
720 1033 1.060244 AGATTATGGGGAAGAGGGGCT 60.060 52.381 0.00 0.00 0.00 5.19
721 1034 2.184565 AGATTATGGGGAAGAGGGGCTA 59.815 50.000 0.00 0.00 0.00 3.93
722 1035 1.815757 TTATGGGGAAGAGGGGCTAC 58.184 55.000 0.00 0.00 0.00 3.58
723 1036 0.645496 TATGGGGAAGAGGGGCTACA 59.355 55.000 0.00 0.00 0.00 2.74
724 1037 0.988678 ATGGGGAAGAGGGGCTACAC 60.989 60.000 0.00 0.00 0.00 2.90
725 1038 2.732619 GGGGAAGAGGGGCTACACG 61.733 68.421 0.00 0.00 0.00 4.49
726 1039 2.187163 GGAAGAGGGGCTACACGC 59.813 66.667 0.00 0.00 38.13 5.34
727 1040 2.656069 GGAAGAGGGGCTACACGCA 61.656 63.158 0.00 0.00 41.67 5.24
728 1041 1.153549 GAAGAGGGGCTACACGCAG 60.154 63.158 0.00 0.00 41.67 5.18
730 1043 1.481056 AAGAGGGGCTACACGCAGTT 61.481 55.000 0.00 0.00 41.61 3.16
731 1044 0.613853 AGAGGGGCTACACGCAGTTA 60.614 55.000 0.00 0.00 41.61 2.24
732 1045 0.459759 GAGGGGCTACACGCAGTTAC 60.460 60.000 0.00 0.00 41.61 2.50
733 1046 1.189524 AGGGGCTACACGCAGTTACA 61.190 55.000 0.00 0.00 41.61 2.41
734 1047 1.017701 GGGGCTACACGCAGTTACAC 61.018 60.000 0.00 0.00 41.61 2.90
735 1048 1.349259 GGGCTACACGCAGTTACACG 61.349 60.000 0.00 0.00 41.61 4.49
736 1049 0.665369 GGCTACACGCAGTTACACGT 60.665 55.000 0.00 0.00 41.61 4.49
737 1050 1.134226 GCTACACGCAGTTACACGTT 58.866 50.000 0.85 0.00 41.61 3.99
738 1051 1.136721 GCTACACGCAGTTACACGTTG 60.137 52.381 0.85 1.24 41.61 4.10
739 1052 2.387185 CTACACGCAGTTACACGTTGA 58.613 47.619 0.85 0.00 41.61 3.18
740 1053 0.925466 ACACGCAGTTACACGTTGAC 59.075 50.000 0.85 0.00 41.61 3.18
741 1054 1.205657 CACGCAGTTACACGTTGACT 58.794 50.000 0.85 0.00 41.61 3.41
742 1055 2.223548 ACACGCAGTTACACGTTGACTA 60.224 45.455 0.85 0.00 41.61 2.59
743 1056 2.404029 CACGCAGTTACACGTTGACTAG 59.596 50.000 0.85 0.00 41.61 2.57
744 1057 1.983605 CGCAGTTACACGTTGACTAGG 59.016 52.381 0.00 0.00 0.00 3.02
745 1058 2.351060 CGCAGTTACACGTTGACTAGGA 60.351 50.000 0.00 0.00 0.00 2.94
746 1059 3.672511 CGCAGTTACACGTTGACTAGGAT 60.673 47.826 0.00 0.00 0.00 3.24
747 1060 4.243270 GCAGTTACACGTTGACTAGGATT 58.757 43.478 0.00 0.00 0.00 3.01
748 1061 4.326548 GCAGTTACACGTTGACTAGGATTC 59.673 45.833 0.00 0.00 0.00 2.52
749 1062 5.710984 CAGTTACACGTTGACTAGGATTCT 58.289 41.667 0.00 0.00 0.00 2.40
750 1063 6.157211 CAGTTACACGTTGACTAGGATTCTT 58.843 40.000 0.00 0.00 0.00 2.52
751 1064 6.645415 CAGTTACACGTTGACTAGGATTCTTT 59.355 38.462 0.00 0.00 0.00 2.52
752 1065 6.867293 AGTTACACGTTGACTAGGATTCTTTC 59.133 38.462 0.00 0.00 0.00 2.62
753 1066 5.470047 ACACGTTGACTAGGATTCTTTCT 57.530 39.130 0.00 0.00 0.00 2.52
754 1067 5.855045 ACACGTTGACTAGGATTCTTTCTT 58.145 37.500 0.00 0.00 0.00 2.52
755 1068 6.289064 ACACGTTGACTAGGATTCTTTCTTT 58.711 36.000 0.00 0.00 0.00 2.52
756 1069 6.424207 ACACGTTGACTAGGATTCTTTCTTTC 59.576 38.462 0.00 0.00 0.00 2.62
757 1070 6.647067 CACGTTGACTAGGATTCTTTCTTTCT 59.353 38.462 0.00 0.00 0.00 2.52
758 1071 7.813148 CACGTTGACTAGGATTCTTTCTTTCTA 59.187 37.037 0.00 0.00 0.00 2.10
759 1072 8.365647 ACGTTGACTAGGATTCTTTCTTTCTAA 58.634 33.333 0.00 0.00 0.00 2.10
760 1073 8.648968 CGTTGACTAGGATTCTTTCTTTCTAAC 58.351 37.037 0.00 0.00 0.00 2.34
761 1074 9.713713 GTTGACTAGGATTCTTTCTTTCTAACT 57.286 33.333 0.00 0.00 0.00 2.24
771 1084 9.674068 ATTCTTTCTTTCTAACTAATCACTCCC 57.326 33.333 0.00 0.00 0.00 4.30
772 1085 7.621796 TCTTTCTTTCTAACTAATCACTCCCC 58.378 38.462 0.00 0.00 0.00 4.81
773 1086 5.952347 TCTTTCTAACTAATCACTCCCCC 57.048 43.478 0.00 0.00 0.00 5.40
790 1103 1.488390 CCCCTGATTTTCATGGGGTG 58.512 55.000 16.71 1.74 45.29 4.61
791 1104 1.488390 CCCTGATTTTCATGGGGTGG 58.512 55.000 0.00 0.00 33.76 4.61
792 1105 1.488390 CCTGATTTTCATGGGGTGGG 58.512 55.000 0.00 0.00 0.00 4.61
793 1106 0.826062 CTGATTTTCATGGGGTGGGC 59.174 55.000 0.00 0.00 0.00 5.36
794 1107 0.617249 TGATTTTCATGGGGTGGGCC 60.617 55.000 0.00 0.00 0.00 5.80
805 1118 4.103928 GTGGGCCCCTCTCCCCTA 62.104 72.222 22.27 0.00 43.24 3.53
806 1119 3.049288 TGGGCCCCTCTCCCCTAT 61.049 66.667 22.27 0.00 43.24 2.57
807 1120 1.711089 TGGGCCCCTCTCCCCTATA 60.711 63.158 22.27 0.00 43.24 1.31
808 1121 1.316420 TGGGCCCCTCTCCCCTATAA 61.316 60.000 22.27 0.00 43.24 0.98
809 1122 0.121402 GGGCCCCTCTCCCCTATAAT 59.879 60.000 12.23 0.00 38.30 1.28
810 1123 1.585895 GGCCCCTCTCCCCTATAATC 58.414 60.000 0.00 0.00 0.00 1.75
811 1124 1.081343 GGCCCCTCTCCCCTATAATCT 59.919 57.143 0.00 0.00 0.00 2.40
812 1125 2.473070 GCCCCTCTCCCCTATAATCTC 58.527 57.143 0.00 0.00 0.00 2.75
813 1126 2.894864 GCCCCTCTCCCCTATAATCTCC 60.895 59.091 0.00 0.00 0.00 3.71
814 1127 2.387160 CCCCTCTCCCCTATAATCTCCA 59.613 54.545 0.00 0.00 0.00 3.86
815 1128 3.181395 CCCCTCTCCCCTATAATCTCCAA 60.181 52.174 0.00 0.00 0.00 3.53
816 1129 4.515538 CCCCTCTCCCCTATAATCTCCAAT 60.516 50.000 0.00 0.00 0.00 3.16
817 1130 4.719273 CCCTCTCCCCTATAATCTCCAATC 59.281 50.000 0.00 0.00 0.00 2.67
818 1131 5.345418 CCTCTCCCCTATAATCTCCAATCA 58.655 45.833 0.00 0.00 0.00 2.57
819 1132 5.787494 CCTCTCCCCTATAATCTCCAATCAA 59.213 44.000 0.00 0.00 0.00 2.57
820 1133 6.273260 CCTCTCCCCTATAATCTCCAATCAAA 59.727 42.308 0.00 0.00 0.00 2.69
821 1134 7.202223 CCTCTCCCCTATAATCTCCAATCAAAA 60.202 40.741 0.00 0.00 0.00 2.44
822 1135 8.293027 TCTCCCCTATAATCTCCAATCAAAAT 57.707 34.615 0.00 0.00 0.00 1.82
823 1136 8.736675 TCTCCCCTATAATCTCCAATCAAAATT 58.263 33.333 0.00 0.00 0.00 1.82
824 1137 8.940397 TCCCCTATAATCTCCAATCAAAATTC 57.060 34.615 0.00 0.00 0.00 2.17
825 1138 8.510283 TCCCCTATAATCTCCAATCAAAATTCA 58.490 33.333 0.00 0.00 0.00 2.57
826 1139 9.317827 CCCCTATAATCTCCAATCAAAATTCAT 57.682 33.333 0.00 0.00 0.00 2.57
864 1177 9.698309 ATCTGTGTAAATCTATGTATGTGTAGC 57.302 33.333 0.00 0.00 0.00 3.58
865 1178 8.691797 TCTGTGTAAATCTATGTATGTGTAGCA 58.308 33.333 0.00 0.00 0.00 3.49
866 1179 9.481340 CTGTGTAAATCTATGTATGTGTAGCAT 57.519 33.333 0.00 0.00 41.42 3.79
867 1180 9.830975 TGTGTAAATCTATGTATGTGTAGCATT 57.169 29.630 0.00 0.00 38.94 3.56
872 1185 8.972262 AATCTATGTATGTGTAGCATTACTCG 57.028 34.615 0.00 0.00 38.94 4.18
873 1186 7.506328 TCTATGTATGTGTAGCATTACTCGT 57.494 36.000 0.00 0.00 38.94 4.18
874 1187 7.937649 TCTATGTATGTGTAGCATTACTCGTT 58.062 34.615 0.00 0.00 38.94 3.85
875 1188 6.828502 ATGTATGTGTAGCATTACTCGTTG 57.171 37.500 0.00 0.00 38.94 4.10
876 1189 5.716094 TGTATGTGTAGCATTACTCGTTGT 58.284 37.500 0.00 0.00 38.94 3.32
877 1190 6.854778 TGTATGTGTAGCATTACTCGTTGTA 58.145 36.000 0.00 0.00 38.94 2.41
878 1191 6.748658 TGTATGTGTAGCATTACTCGTTGTAC 59.251 38.462 0.00 0.00 38.94 2.90
879 1192 5.123805 TGTGTAGCATTACTCGTTGTACA 57.876 39.130 0.00 0.00 0.00 2.90
880 1193 4.919168 TGTGTAGCATTACTCGTTGTACAC 59.081 41.667 0.00 0.00 0.00 2.90
924 1237 1.904287 TTGCACCCATGTCAACTACC 58.096 50.000 0.00 0.00 0.00 3.18
1011 1894 0.309612 GGCCGTGCCCATAAATAACG 59.690 55.000 3.73 0.00 44.06 3.18
1015 1898 1.332375 CGTGCCCATAAATAACGGTGG 59.668 52.381 0.00 0.00 0.00 4.61
1040 1940 0.737715 CCTGCTAGTTCACACTCGGC 60.738 60.000 0.00 0.00 34.06 5.54
1042 1942 2.445438 GCTAGTTCACACTCGGCGC 61.445 63.158 0.00 0.00 34.06 6.53
1047 1947 4.961511 TCACACTCGGCGCACACC 62.962 66.667 10.83 0.00 0.00 4.16
1074 1974 2.880890 ACTTCACAGTTCATCCTGTTGC 59.119 45.455 0.00 0.00 42.99 4.17
1113 2013 3.764466 AGCCGGCCTCGTTCTCAG 61.764 66.667 26.15 0.00 33.95 3.35
1162 2062 1.255667 TGCTGGTCCTACCTTCGTCC 61.256 60.000 0.00 0.00 39.58 4.79
1393 2293 1.502163 GCTGCGACAAGTGCAAGACT 61.502 55.000 0.00 0.00 42.70 3.24
1530 2439 2.985847 GCAGGGTTGCCTGACCAC 60.986 66.667 0.00 0.00 44.74 4.16
1642 2565 2.350772 GGTCAACTGTGTATGCTTGTGC 60.351 50.000 0.00 0.00 40.20 4.57
1643 2566 2.549754 GTCAACTGTGTATGCTTGTGCT 59.450 45.455 0.00 0.00 40.48 4.40
1694 3145 9.255568 GTATCTAAGTAATACGTACGGAAATCG 57.744 37.037 21.06 0.00 45.88 3.34
1712 3163 9.210426 CGGAAATCGTTAACTTTCATGAAATAG 57.790 33.333 20.76 12.88 33.89 1.73
1737 3188 9.350357 AGTTAACATGTACTACTGTTCAATACG 57.650 33.333 8.61 0.00 36.92 3.06
1755 3212 7.966111 TCAATACGTAATAAATTTGCAGTCGT 58.034 30.769 0.00 7.95 0.00 4.34
1756 3213 8.444715 TCAATACGTAATAAATTTGCAGTCGTT 58.555 29.630 0.00 0.00 0.00 3.85
1821 3278 1.798813 CGCACCTCCAAAGAACAGTAC 59.201 52.381 0.00 0.00 0.00 2.73
1824 3281 3.630312 GCACCTCCAAAGAACAGTACAAA 59.370 43.478 0.00 0.00 0.00 2.83
1931 3428 1.069823 TGCAATGCACCCACGAAAAAT 59.930 42.857 2.72 0.00 31.71 1.82
1975 3472 9.612066 TTAGCAAAATTGGAAAAAGTCTGAAAT 57.388 25.926 0.00 0.00 0.00 2.17
1978 3475 9.012448 GCAAAATTGGAAAAAGTCTGAAATTTG 57.988 29.630 0.00 0.00 30.78 2.32
1988 3485 3.882888 AGTCTGAAATTTGTGGCTTCGAA 59.117 39.130 0.00 0.00 0.00 3.71
2051 3851 9.775854 AAATGACATTCAAGGATATCTAGACAG 57.224 33.333 0.05 0.00 0.00 3.51
2056 3856 9.829507 ACATTCAAGGATATCTAGACAGAAAAG 57.170 33.333 2.05 0.92 33.50 2.27
2060 3860 9.488762 TCAAGGATATCTAGACAGAAAAGGTTA 57.511 33.333 2.05 0.00 33.50 2.85
2107 3907 6.486253 TTTTTGTCTCGAGATCCTCAAATG 57.514 37.500 22.22 0.00 0.00 2.32
2119 3919 6.192773 AGATCCTCAAATGTCATTTCACCAT 58.807 36.000 7.87 0.00 0.00 3.55
2158 3958 5.416271 TTTTTAGTGGGTAGCAGTAGGAG 57.584 43.478 0.00 0.00 0.00 3.69
2159 3959 2.068834 TAGTGGGTAGCAGTAGGAGC 57.931 55.000 0.00 0.00 0.00 4.70
2160 3960 0.336737 AGTGGGTAGCAGTAGGAGCT 59.663 55.000 0.00 0.00 45.77 4.09
2161 3961 0.747852 GTGGGTAGCAGTAGGAGCTC 59.252 60.000 4.71 4.71 42.32 4.09
2162 3962 0.631753 TGGGTAGCAGTAGGAGCTCT 59.368 55.000 14.64 2.18 42.32 4.09
2163 3963 1.036707 GGGTAGCAGTAGGAGCTCTG 58.963 60.000 14.64 4.91 42.32 3.35
2169 3969 2.777832 CAGTAGGAGCTCTGCCTTTT 57.222 50.000 14.64 0.00 36.96 2.27
2170 3970 2.626840 CAGTAGGAGCTCTGCCTTTTC 58.373 52.381 14.64 0.00 36.96 2.29
2171 3971 2.027745 CAGTAGGAGCTCTGCCTTTTCA 60.028 50.000 14.64 0.00 36.96 2.69
2172 3972 2.843113 AGTAGGAGCTCTGCCTTTTCAT 59.157 45.455 14.64 0.00 36.96 2.57
2173 3973 2.895242 AGGAGCTCTGCCTTTTCATT 57.105 45.000 14.64 0.00 29.44 2.57
2174 3974 4.471386 AGTAGGAGCTCTGCCTTTTCATTA 59.529 41.667 14.64 0.00 36.96 1.90
2175 3975 4.516652 AGGAGCTCTGCCTTTTCATTAT 57.483 40.909 14.64 0.00 29.44 1.28
2176 3976 5.636903 AGGAGCTCTGCCTTTTCATTATA 57.363 39.130 14.64 0.00 29.44 0.98
2177 3977 5.619220 AGGAGCTCTGCCTTTTCATTATAG 58.381 41.667 14.64 0.00 29.44 1.31
2178 3978 4.215185 GGAGCTCTGCCTTTTCATTATAGC 59.785 45.833 14.64 0.00 0.00 2.97
2179 3979 4.785301 AGCTCTGCCTTTTCATTATAGCA 58.215 39.130 0.00 0.00 0.00 3.49
2181 3981 4.023365 GCTCTGCCTTTTCATTATAGCAGG 60.023 45.833 9.67 2.73 45.95 4.85
2182 3982 4.464008 TCTGCCTTTTCATTATAGCAGGG 58.536 43.478 9.67 0.00 45.95 4.45
2183 3983 4.165950 TCTGCCTTTTCATTATAGCAGGGA 59.834 41.667 9.67 0.00 45.95 4.20
2184 3984 4.865905 TGCCTTTTCATTATAGCAGGGAA 58.134 39.130 0.00 0.00 0.00 3.97
2185 3985 5.268387 TGCCTTTTCATTATAGCAGGGAAA 58.732 37.500 0.00 0.00 0.00 3.13
2186 3986 5.719085 TGCCTTTTCATTATAGCAGGGAAAA 59.281 36.000 0.00 0.00 36.41 2.29
2187 3987 6.212388 TGCCTTTTCATTATAGCAGGGAAAAA 59.788 34.615 0.00 0.00 37.11 1.94
2188 3988 6.758416 GCCTTTTCATTATAGCAGGGAAAAAG 59.242 38.462 0.00 0.00 37.11 2.27
2189 3989 7.579531 GCCTTTTCATTATAGCAGGGAAAAAGT 60.580 37.037 0.00 0.00 37.11 2.66
2190 3990 7.761249 CCTTTTCATTATAGCAGGGAAAAAGTG 59.239 37.037 0.00 0.00 37.11 3.16
2191 3991 7.775053 TTTCATTATAGCAGGGAAAAAGTGT 57.225 32.000 0.00 0.00 0.00 3.55
2192 3992 7.775053 TTCATTATAGCAGGGAAAAAGTGTT 57.225 32.000 0.00 0.00 0.00 3.32
2193 3993 8.871629 TTCATTATAGCAGGGAAAAAGTGTTA 57.128 30.769 0.00 0.00 0.00 2.41
2194 3994 8.276252 TCATTATAGCAGGGAAAAAGTGTTAC 57.724 34.615 0.00 0.00 0.00 2.50
2195 3995 7.885922 TCATTATAGCAGGGAAAAAGTGTTACA 59.114 33.333 0.00 0.00 0.00 2.41
2196 3996 8.519526 CATTATAGCAGGGAAAAAGTGTTACAA 58.480 33.333 0.00 0.00 0.00 2.41
2197 3997 8.644374 TTATAGCAGGGAAAAAGTGTTACAAT 57.356 30.769 0.00 0.00 0.00 2.71
2198 3998 5.869649 AGCAGGGAAAAAGTGTTACAATT 57.130 34.783 0.00 0.00 0.00 2.32
2199 3999 5.600696 AGCAGGGAAAAAGTGTTACAATTG 58.399 37.500 3.24 3.24 0.00 2.32
2200 4000 5.362430 AGCAGGGAAAAAGTGTTACAATTGA 59.638 36.000 13.59 0.00 0.00 2.57
2201 4001 6.045955 GCAGGGAAAAAGTGTTACAATTGAA 58.954 36.000 13.59 0.00 0.00 2.69
2202 4002 6.536941 GCAGGGAAAAAGTGTTACAATTGAAA 59.463 34.615 13.59 0.00 0.00 2.69
2203 4003 7.065204 GCAGGGAAAAAGTGTTACAATTGAAAA 59.935 33.333 13.59 3.13 0.00 2.29
2204 4004 8.387354 CAGGGAAAAAGTGTTACAATTGAAAAC 58.613 33.333 13.59 15.44 0.00 2.43
2205 4005 8.318412 AGGGAAAAAGTGTTACAATTGAAAACT 58.682 29.630 13.59 9.63 0.00 2.66
2206 4006 9.589111 GGGAAAAAGTGTTACAATTGAAAACTA 57.411 29.630 13.59 4.87 0.00 2.24
2210 4010 9.915629 AAAAGTGTTACAATTGAAAACTACACA 57.084 25.926 13.59 0.26 0.00 3.72
2211 4011 9.915629 AAAGTGTTACAATTGAAAACTACACAA 57.084 25.926 13.59 0.00 0.00 3.33
2228 4028 2.483877 CACAATGTACATCACGCAAGGT 59.516 45.455 9.23 0.00 46.39 3.50
2275 4075 2.349755 GGGCCCTGTGCGAAACTA 59.650 61.111 17.04 0.00 42.61 2.24
2439 4882 6.725834 TGATATGGTAGCAGATATCAGTTGGA 59.274 38.462 12.16 0.00 36.88 3.53
2472 4915 9.532697 GCATCAATGTTTGACAATTAAATGAAC 57.467 29.630 0.00 0.00 43.48 3.18
2474 4917 9.775854 ATCAATGTTTGACAATTAAATGAACCA 57.224 25.926 0.00 0.00 43.48 3.67
2512 4955 1.270625 TGTGTCCCGTCAGATTGAACC 60.271 52.381 0.00 0.00 0.00 3.62
2566 5009 9.976511 CAATAATGCAAGAACATATCTTTCCAT 57.023 29.630 0.00 0.00 46.39 3.41
2568 5011 9.976511 ATAATGCAAGAACATATCTTTCCATTG 57.023 29.630 16.34 0.00 46.39 2.82
2569 5012 7.649533 ATGCAAGAACATATCTTTCCATTGA 57.350 32.000 0.00 0.00 46.39 2.57
2570 5013 7.649533 TGCAAGAACATATCTTTCCATTGAT 57.350 32.000 0.00 0.00 46.39 2.57
2571 5014 7.709947 TGCAAGAACATATCTTTCCATTGATC 58.290 34.615 0.00 0.00 46.39 2.92
2572 5015 7.144000 GCAAGAACATATCTTTCCATTGATCC 58.856 38.462 0.00 0.00 46.39 3.36
2573 5016 7.201848 GCAAGAACATATCTTTCCATTGATCCA 60.202 37.037 0.00 0.00 46.39 3.41
2574 5017 8.857098 CAAGAACATATCTTTCCATTGATCCAT 58.143 33.333 0.00 0.00 46.39 3.41
2575 5018 8.405418 AGAACATATCTTTCCATTGATCCATG 57.595 34.615 0.00 0.00 33.39 3.66
2576 5019 8.003044 AGAACATATCTTTCCATTGATCCATGT 58.997 33.333 6.08 0.00 33.39 3.21
2577 5020 7.520451 ACATATCTTTCCATTGATCCATGTG 57.480 36.000 6.08 0.00 0.00 3.21
2578 5021 7.292319 ACATATCTTTCCATTGATCCATGTGA 58.708 34.615 6.08 1.02 0.00 3.58
2579 5022 7.781219 ACATATCTTTCCATTGATCCATGTGAA 59.219 33.333 6.08 6.38 0.00 3.18
2580 5023 8.635328 CATATCTTTCCATTGATCCATGTGAAA 58.365 33.333 15.90 15.90 0.00 2.69
2581 5024 6.914654 TCTTTCCATTGATCCATGTGAAAA 57.085 33.333 16.76 9.80 0.00 2.29
2582 5025 6.927416 TCTTTCCATTGATCCATGTGAAAAG 58.073 36.000 16.76 15.50 0.00 2.27
2583 5026 6.494491 TCTTTCCATTGATCCATGTGAAAAGT 59.506 34.615 16.76 0.00 0.00 2.66
2584 5027 6.669125 TTCCATTGATCCATGTGAAAAGTT 57.331 33.333 6.08 0.00 0.00 2.66
2585 5028 7.773489 TTCCATTGATCCATGTGAAAAGTTA 57.227 32.000 6.08 0.00 0.00 2.24
2586 5029 7.773489 TCCATTGATCCATGTGAAAAGTTAA 57.227 32.000 6.08 0.00 0.00 2.01
2587 5030 8.365060 TCCATTGATCCATGTGAAAAGTTAAT 57.635 30.769 6.08 0.00 0.00 1.40
2588 5031 8.814931 TCCATTGATCCATGTGAAAAGTTAATT 58.185 29.630 6.08 0.00 0.00 1.40
2636 5079 8.616799 AGGAATAGAATTTGGAGTAAGACTCT 57.383 34.615 6.58 0.00 44.46 3.24
2637 5080 8.482128 AGGAATAGAATTTGGAGTAAGACTCTG 58.518 37.037 6.58 0.00 44.46 3.35
2638 5081 8.478877 GGAATAGAATTTGGAGTAAGACTCTGA 58.521 37.037 6.58 0.00 44.46 3.27
2639 5082 9.877178 GAATAGAATTTGGAGTAAGACTCTGAA 57.123 33.333 6.58 2.98 44.46 3.02
2643 5086 9.660180 AGAATTTGGAGTAAGACTCTGAAATAC 57.340 33.333 6.58 0.00 44.46 1.89
2644 5087 9.660180 GAATTTGGAGTAAGACTCTGAAATACT 57.340 33.333 6.58 0.00 44.46 2.12
2645 5088 9.660180 AATTTGGAGTAAGACTCTGAAATACTC 57.340 33.333 6.58 6.95 44.46 2.59
2646 5089 7.776618 TTGGAGTAAGACTCTGAAATACTCA 57.223 36.000 13.88 2.93 44.46 3.41
2647 5090 7.962995 TGGAGTAAGACTCTGAAATACTCAT 57.037 36.000 13.88 0.00 44.46 2.90
2648 5091 8.001881 TGGAGTAAGACTCTGAAATACTCATC 57.998 38.462 13.88 3.28 44.46 2.92
2649 5092 7.068839 TGGAGTAAGACTCTGAAATACTCATCC 59.931 40.741 13.88 3.38 44.46 3.51
2650 5093 7.286775 GGAGTAAGACTCTGAAATACTCATCCT 59.713 40.741 13.88 0.00 44.46 3.24
2651 5094 9.344772 GAGTAAGACTCTGAAATACTCATCCTA 57.655 37.037 9.44 0.00 41.88 2.94
2652 5095 9.875708 AGTAAGACTCTGAAATACTCATCCTAT 57.124 33.333 0.00 0.00 32.14 2.57
2682 5125 3.118884 TCAGTTAATTAGGCGTGTCCCTC 60.119 47.826 0.00 0.00 36.41 4.30
2716 5159 3.579534 TGACTCGTCCTAGATTAGGCT 57.420 47.619 0.00 0.00 45.82 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 6.157471 AGGACAGCATATGCCATAATAGATCA 59.843 38.462 23.96 0.00 43.38 2.92
42 43 5.760484 TGAGGACAGCATATGCCATAATA 57.240 39.130 23.96 3.19 43.38 0.98
45 46 3.054875 GGATGAGGACAGCATATGCCATA 60.055 47.826 23.96 4.64 43.38 2.74
46 47 2.290768 GGATGAGGACAGCATATGCCAT 60.291 50.000 23.96 17.67 43.38 4.40
47 48 1.072806 GGATGAGGACAGCATATGCCA 59.927 52.381 23.96 13.70 43.38 4.92
49 50 2.556144 TGGATGAGGACAGCATATGC 57.444 50.000 20.36 20.36 42.49 3.14
50 51 4.008330 GGAATGGATGAGGACAGCATATG 58.992 47.826 0.00 0.00 33.73 1.78
51 52 3.915073 AGGAATGGATGAGGACAGCATAT 59.085 43.478 0.00 0.00 33.73 1.78
52 53 3.321039 AGGAATGGATGAGGACAGCATA 58.679 45.455 0.00 0.00 33.73 3.14
56 57 4.596643 AGGAATAGGAATGGATGAGGACAG 59.403 45.833 0.00 0.00 0.00 3.51
63 64 6.415206 AAAATGCAGGAATAGGAATGGATG 57.585 37.500 0.00 0.00 0.00 3.51
72 73 7.325338 CGCATGATTCTAAAAATGCAGGAATAG 59.675 37.037 0.00 0.00 44.47 1.73
82 83 7.315142 TCTTTGCTTCGCATGATTCTAAAAAT 58.685 30.769 0.00 0.00 38.76 1.82
84 85 6.149308 TCTCTTTGCTTCGCATGATTCTAAAA 59.851 34.615 0.00 0.00 38.76 1.52
101 102 1.981256 TCAACTTGGGGTCTCTTTGC 58.019 50.000 0.00 0.00 0.00 3.68
178 179 4.465305 CAGAAGATTGGAGCAAAAGGGAAT 59.535 41.667 0.00 0.00 0.00 3.01
197 198 6.313658 CGACACCATTCATATGTTTCTCAGAA 59.686 38.462 1.90 0.00 0.00 3.02
199 200 5.582269 ACGACACCATTCATATGTTTCTCAG 59.418 40.000 1.90 0.00 0.00 3.35
203 204 5.794687 TGACGACACCATTCATATGTTTC 57.205 39.130 1.90 0.00 0.00 2.78
251 252 8.966868 TGGAAAATATATTTCAAAGGTGGAGAC 58.033 33.333 11.08 0.00 0.00 3.36
269 274 5.538053 TGAGGACAACTTTGCATGGAAAATA 59.462 36.000 13.69 0.00 0.00 1.40
333 338 4.527038 TCTCCGTGGAGAAGAACACTTATT 59.473 41.667 16.13 0.00 46.89 1.40
335 340 3.493334 TCTCCGTGGAGAAGAACACTTA 58.507 45.455 16.13 0.00 46.89 2.24
336 341 2.317040 TCTCCGTGGAGAAGAACACTT 58.683 47.619 16.13 0.00 46.89 3.16
337 342 1.996798 TCTCCGTGGAGAAGAACACT 58.003 50.000 16.13 0.00 46.89 3.55
453 766 6.209788 ACTCGAAAGTCTCTCAAAACCTAGAT 59.790 38.462 0.00 0.00 0.00 1.98
454 767 5.535406 ACTCGAAAGTCTCTCAAAACCTAGA 59.465 40.000 0.00 0.00 0.00 2.43
455 768 5.774630 ACTCGAAAGTCTCTCAAAACCTAG 58.225 41.667 0.00 0.00 0.00 3.02
456 769 5.786264 ACTCGAAAGTCTCTCAAAACCTA 57.214 39.130 0.00 0.00 0.00 3.08
457 770 4.674281 ACTCGAAAGTCTCTCAAAACCT 57.326 40.909 0.00 0.00 0.00 3.50
458 771 7.422878 AATTACTCGAAAGTCTCTCAAAACC 57.577 36.000 0.00 0.00 36.92 3.27
461 774 9.923143 TGATTAATTACTCGAAAGTCTCTCAAA 57.077 29.630 0.00 0.00 36.92 2.69
462 775 9.923143 TTGATTAATTACTCGAAAGTCTCTCAA 57.077 29.630 0.00 0.00 36.92 3.02
463 776 9.923143 TTTGATTAATTACTCGAAAGTCTCTCA 57.077 29.630 3.60 0.00 36.92 3.27
481 794 9.621629 TGGAGAAGAACACTTACTTTTGATTAA 57.378 29.630 0.00 0.00 0.00 1.40
482 795 9.793259 ATGGAGAAGAACACTTACTTTTGATTA 57.207 29.630 0.00 0.00 0.00 1.75
483 796 8.571336 CATGGAGAAGAACACTTACTTTTGATT 58.429 33.333 0.00 0.00 0.00 2.57
484 797 7.175641 CCATGGAGAAGAACACTTACTTTTGAT 59.824 37.037 5.56 0.00 0.00 2.57
485 798 6.486657 CCATGGAGAAGAACACTTACTTTTGA 59.513 38.462 5.56 0.00 0.00 2.69
486 799 6.486657 TCCATGGAGAAGAACACTTACTTTTG 59.513 38.462 11.44 0.00 0.00 2.44
487 800 6.601332 TCCATGGAGAAGAACACTTACTTTT 58.399 36.000 11.44 0.00 0.00 2.27
488 801 6.043243 TCTCCATGGAGAAGAACACTTACTTT 59.957 38.462 37.09 0.00 46.89 2.66
489 802 5.544176 TCTCCATGGAGAAGAACACTTACTT 59.456 40.000 37.09 0.00 46.89 2.24
490 803 5.087323 TCTCCATGGAGAAGAACACTTACT 58.913 41.667 37.09 0.00 46.89 2.24
491 804 5.407407 TCTCCATGGAGAAGAACACTTAC 57.593 43.478 37.09 0.00 46.89 2.34
503 816 0.841961 TGGCTTGGATCTCCATGGAG 59.158 55.000 32.60 32.60 46.97 3.86
504 817 1.297968 TTGGCTTGGATCTCCATGGA 58.702 50.000 15.27 15.27 46.97 3.41
505 818 2.148446 TTTGGCTTGGATCTCCATGG 57.852 50.000 4.97 4.97 46.97 3.66
506 819 2.159142 GCTTTTGGCTTGGATCTCCATG 60.159 50.000 0.00 3.81 46.97 3.66
507 820 2.105766 GCTTTTGGCTTGGATCTCCAT 58.894 47.619 0.00 0.00 46.97 3.41
508 821 1.203038 TGCTTTTGGCTTGGATCTCCA 60.203 47.619 0.00 0.00 42.21 3.86
509 822 1.475682 CTGCTTTTGGCTTGGATCTCC 59.524 52.381 0.00 0.00 42.39 3.71
510 823 2.440409 TCTGCTTTTGGCTTGGATCTC 58.560 47.619 0.00 0.00 42.39 2.75
511 824 2.592102 TCTGCTTTTGGCTTGGATCT 57.408 45.000 0.00 0.00 42.39 2.75
512 825 3.256631 TCTTTCTGCTTTTGGCTTGGATC 59.743 43.478 0.00 0.00 42.39 3.36
513 826 3.233507 TCTTTCTGCTTTTGGCTTGGAT 58.766 40.909 0.00 0.00 42.39 3.41
514 827 2.665165 TCTTTCTGCTTTTGGCTTGGA 58.335 42.857 0.00 0.00 42.39 3.53
515 828 3.387397 CTTCTTTCTGCTTTTGGCTTGG 58.613 45.455 0.00 0.00 42.39 3.61
516 829 3.181472 ACCTTCTTTCTGCTTTTGGCTTG 60.181 43.478 0.00 0.00 42.39 4.01
517 830 3.033909 ACCTTCTTTCTGCTTTTGGCTT 58.966 40.909 0.00 0.00 42.39 4.35
518 831 2.625314 GACCTTCTTTCTGCTTTTGGCT 59.375 45.455 0.00 0.00 42.39 4.75
519 832 2.625314 AGACCTTCTTTCTGCTTTTGGC 59.375 45.455 0.00 0.00 42.22 4.52
520 833 5.620879 GCATAGACCTTCTTTCTGCTTTTGG 60.621 44.000 0.00 0.00 0.00 3.28
521 834 5.397326 GCATAGACCTTCTTTCTGCTTTTG 58.603 41.667 0.00 0.00 0.00 2.44
522 835 4.460731 GGCATAGACCTTCTTTCTGCTTTT 59.539 41.667 0.00 0.00 30.75 2.27
523 836 4.013050 GGCATAGACCTTCTTTCTGCTTT 58.987 43.478 0.00 0.00 30.75 3.51
524 837 3.009473 TGGCATAGACCTTCTTTCTGCTT 59.991 43.478 0.00 0.00 30.75 3.91
525 838 2.573462 TGGCATAGACCTTCTTTCTGCT 59.427 45.455 0.00 0.00 30.75 4.24
526 839 2.941720 CTGGCATAGACCTTCTTTCTGC 59.058 50.000 0.00 0.00 0.00 4.26
527 840 3.198635 TCCTGGCATAGACCTTCTTTCTG 59.801 47.826 0.00 0.00 0.00 3.02
528 841 3.454858 TCCTGGCATAGACCTTCTTTCT 58.545 45.455 0.00 0.00 0.00 2.52
529 842 3.914426 TCCTGGCATAGACCTTCTTTC 57.086 47.619 0.00 0.00 0.00 2.62
530 843 4.684485 CGATTCCTGGCATAGACCTTCTTT 60.684 45.833 0.00 0.00 0.00 2.52
531 844 3.181461 CGATTCCTGGCATAGACCTTCTT 60.181 47.826 0.00 0.00 0.00 2.52
532 845 2.366916 CGATTCCTGGCATAGACCTTCT 59.633 50.000 0.00 0.00 0.00 2.85
533 846 2.103263 ACGATTCCTGGCATAGACCTTC 59.897 50.000 0.00 0.00 0.00 3.46
534 847 2.119495 ACGATTCCTGGCATAGACCTT 58.881 47.619 0.00 0.00 0.00 3.50
535 848 1.414181 CACGATTCCTGGCATAGACCT 59.586 52.381 0.00 0.00 0.00 3.85
536 849 1.871080 CACGATTCCTGGCATAGACC 58.129 55.000 0.00 0.00 0.00 3.85
537 850 1.221414 GCACGATTCCTGGCATAGAC 58.779 55.000 0.00 0.00 0.00 2.59
538 851 0.106708 GGCACGATTCCTGGCATAGA 59.893 55.000 4.69 0.00 34.38 1.98
539 852 0.886490 GGGCACGATTCCTGGCATAG 60.886 60.000 10.49 0.00 35.92 2.23
540 853 1.148273 GGGCACGATTCCTGGCATA 59.852 57.895 10.49 0.00 35.92 3.14
541 854 2.124151 GGGCACGATTCCTGGCAT 60.124 61.111 10.49 0.00 35.92 4.40
542 855 4.776322 CGGGCACGATTCCTGGCA 62.776 66.667 0.00 0.00 44.60 4.92
543 856 4.467084 TCGGGCACGATTCCTGGC 62.467 66.667 7.15 1.37 45.59 4.85
552 865 2.225068 AGTTATCTTGATCGGGCACG 57.775 50.000 0.00 0.00 42.74 5.34
553 866 3.069729 AGGTAGTTATCTTGATCGGGCAC 59.930 47.826 0.00 0.00 0.00 5.01
554 867 3.069586 CAGGTAGTTATCTTGATCGGGCA 59.930 47.826 0.00 0.00 0.00 5.36
555 868 3.654414 CAGGTAGTTATCTTGATCGGGC 58.346 50.000 0.00 0.00 0.00 6.13
556 869 3.069586 TGCAGGTAGTTATCTTGATCGGG 59.930 47.826 0.00 0.00 0.00 5.14
557 870 4.322080 TGCAGGTAGTTATCTTGATCGG 57.678 45.455 0.00 0.00 0.00 4.18
558 871 5.292765 ACATGCAGGTAGTTATCTTGATCG 58.707 41.667 0.06 0.00 0.00 3.69
559 872 6.283694 TGACATGCAGGTAGTTATCTTGATC 58.716 40.000 2.88 0.00 0.00 2.92
560 873 6.239217 TGACATGCAGGTAGTTATCTTGAT 57.761 37.500 2.88 0.00 0.00 2.57
561 874 5.675684 TGACATGCAGGTAGTTATCTTGA 57.324 39.130 2.88 0.00 0.00 3.02
562 875 5.877012 AGTTGACATGCAGGTAGTTATCTTG 59.123 40.000 2.88 0.00 0.00 3.02
563 876 6.054860 AGTTGACATGCAGGTAGTTATCTT 57.945 37.500 2.88 0.00 0.00 2.40
564 877 5.683876 AGTTGACATGCAGGTAGTTATCT 57.316 39.130 2.88 0.00 0.00 1.98
565 878 6.149474 ACAAAGTTGACATGCAGGTAGTTATC 59.851 38.462 2.88 0.00 0.00 1.75
566 879 6.003950 ACAAAGTTGACATGCAGGTAGTTAT 58.996 36.000 2.88 0.00 0.00 1.89
567 880 5.373222 ACAAAGTTGACATGCAGGTAGTTA 58.627 37.500 2.88 0.00 0.00 2.24
568 881 4.207165 ACAAAGTTGACATGCAGGTAGTT 58.793 39.130 2.88 0.00 0.00 2.24
569 882 3.820557 ACAAAGTTGACATGCAGGTAGT 58.179 40.909 2.88 0.00 0.00 2.73
570 883 5.238432 TGTTACAAAGTTGACATGCAGGTAG 59.762 40.000 2.88 0.00 0.00 3.18
571 884 5.126779 TGTTACAAAGTTGACATGCAGGTA 58.873 37.500 2.88 0.00 0.00 3.08
572 885 3.951037 TGTTACAAAGTTGACATGCAGGT 59.049 39.130 2.33 2.33 0.00 4.00
573 886 4.566545 TGTTACAAAGTTGACATGCAGG 57.433 40.909 0.00 0.00 0.00 4.85
577 890 4.379498 CGTGCATGTTACAAAGTTGACATG 59.621 41.667 16.07 16.07 38.27 3.21
578 891 4.536065 CGTGCATGTTACAAAGTTGACAT 58.464 39.130 0.00 0.00 0.00 3.06
579 892 3.242903 CCGTGCATGTTACAAAGTTGACA 60.243 43.478 4.96 0.00 0.00 3.58
580 893 3.242936 ACCGTGCATGTTACAAAGTTGAC 60.243 43.478 4.96 0.00 0.00 3.18
581 894 2.946329 ACCGTGCATGTTACAAAGTTGA 59.054 40.909 4.96 0.00 0.00 3.18
582 895 3.042189 CACCGTGCATGTTACAAAGTTG 58.958 45.455 4.96 0.00 0.00 3.16
583 896 2.542824 GCACCGTGCATGTTACAAAGTT 60.543 45.455 18.79 0.00 44.26 2.66
584 897 1.001815 GCACCGTGCATGTTACAAAGT 60.002 47.619 18.79 0.00 44.26 2.66
585 898 1.685302 GCACCGTGCATGTTACAAAG 58.315 50.000 18.79 0.00 44.26 2.77
586 899 3.855630 GCACCGTGCATGTTACAAA 57.144 47.368 18.79 0.00 44.26 2.83
596 909 1.875813 CTCGAGATCTGCACCGTGC 60.876 63.158 16.93 16.93 45.29 5.34
597 910 0.383590 ATCTCGAGATCTGCACCGTG 59.616 55.000 22.32 0.00 0.00 4.94
598 911 0.383590 CATCTCGAGATCTGCACCGT 59.616 55.000 25.00 0.00 31.21 4.83
599 912 0.938637 GCATCTCGAGATCTGCACCG 60.939 60.000 27.94 16.32 32.08 4.94
600 913 0.103755 TGCATCTCGAGATCTGCACC 59.896 55.000 30.45 14.47 35.76 5.01
601 914 1.592081 GTTGCATCTCGAGATCTGCAC 59.408 52.381 32.77 24.99 39.08 4.57
602 915 1.479730 AGTTGCATCTCGAGATCTGCA 59.520 47.619 30.45 30.45 38.02 4.41
603 916 2.222007 AGTTGCATCTCGAGATCTGC 57.778 50.000 26.77 26.77 32.33 4.26
604 917 3.778618 TCAAGTTGCATCTCGAGATCTG 58.221 45.455 25.00 17.50 31.21 2.90
605 918 3.181477 CCTCAAGTTGCATCTCGAGATCT 60.181 47.826 25.00 15.81 31.21 2.75
606 919 3.122297 CCTCAAGTTGCATCTCGAGATC 58.878 50.000 25.00 18.65 31.21 2.75
628 941 7.891498 TGTAGCATTACTCCTGTGTAGAATA 57.109 36.000 0.00 0.00 0.00 1.75
645 958 9.803315 CCGTGTAAATCTATGTATATGTAGCAT 57.197 33.333 0.00 0.00 0.00 3.79
646 959 8.248253 CCCGTGTAAATCTATGTATATGTAGCA 58.752 37.037 0.00 0.00 0.00 3.49
647 960 8.248945 ACCCGTGTAAATCTATGTATATGTAGC 58.751 37.037 0.00 0.00 0.00 3.58
650 963 9.841295 AAAACCCGTGTAAATCTATGTATATGT 57.159 29.630 0.00 0.00 0.00 2.29
654 967 9.669887 TTGTAAAACCCGTGTAAATCTATGTAT 57.330 29.630 0.00 0.00 0.00 2.29
655 968 9.499479 TTTGTAAAACCCGTGTAAATCTATGTA 57.501 29.630 0.00 0.00 0.00 2.29
656 969 7.982761 TTGTAAAACCCGTGTAAATCTATGT 57.017 32.000 0.00 0.00 0.00 2.29
657 970 8.291032 TGTTTGTAAAACCCGTGTAAATCTATG 58.709 33.333 0.71 0.00 0.00 2.23
658 971 8.393671 TGTTTGTAAAACCCGTGTAAATCTAT 57.606 30.769 0.71 0.00 0.00 1.98
659 972 7.714377 TCTGTTTGTAAAACCCGTGTAAATCTA 59.286 33.333 0.71 0.00 0.00 1.98
660 973 6.543100 TCTGTTTGTAAAACCCGTGTAAATCT 59.457 34.615 0.71 0.00 0.00 2.40
661 974 6.727215 TCTGTTTGTAAAACCCGTGTAAATC 58.273 36.000 0.71 0.00 0.00 2.17
662 975 6.696441 TCTGTTTGTAAAACCCGTGTAAAT 57.304 33.333 0.71 0.00 0.00 1.40
663 976 6.318144 TCATCTGTTTGTAAAACCCGTGTAAA 59.682 34.615 0.71 0.00 0.00 2.01
664 977 5.821470 TCATCTGTTTGTAAAACCCGTGTAA 59.179 36.000 0.71 0.00 0.00 2.41
665 978 5.366460 TCATCTGTTTGTAAAACCCGTGTA 58.634 37.500 0.71 0.00 0.00 2.90
666 979 4.200874 TCATCTGTTTGTAAAACCCGTGT 58.799 39.130 0.71 0.00 0.00 4.49
667 980 4.274950 ACTCATCTGTTTGTAAAACCCGTG 59.725 41.667 0.71 0.00 0.00 4.94
668 981 4.457466 ACTCATCTGTTTGTAAAACCCGT 58.543 39.130 0.71 0.00 0.00 5.28
669 982 5.432885 AACTCATCTGTTTGTAAAACCCG 57.567 39.130 0.71 0.00 0.00 5.28
670 983 7.262048 TCAAAACTCATCTGTTTGTAAAACCC 58.738 34.615 0.71 0.00 39.71 4.11
671 984 8.871686 ATCAAAACTCATCTGTTTGTAAAACC 57.128 30.769 0.71 0.00 39.71 3.27
673 986 9.311916 CCAATCAAAACTCATCTGTTTGTAAAA 57.688 29.630 0.00 0.00 39.71 1.52
674 987 8.690884 TCCAATCAAAACTCATCTGTTTGTAAA 58.309 29.630 0.00 0.00 39.71 2.01
675 988 8.231692 TCCAATCAAAACTCATCTGTTTGTAA 57.768 30.769 0.00 0.00 39.71 2.41
676 989 7.719193 TCTCCAATCAAAACTCATCTGTTTGTA 59.281 33.333 0.00 0.00 39.71 2.41
677 990 6.547141 TCTCCAATCAAAACTCATCTGTTTGT 59.453 34.615 0.00 0.00 39.71 2.83
678 991 6.973843 TCTCCAATCAAAACTCATCTGTTTG 58.026 36.000 0.00 0.00 39.71 2.93
679 992 7.771927 ATCTCCAATCAAAACTCATCTGTTT 57.228 32.000 0.00 0.00 41.32 2.83
680 993 7.771927 AATCTCCAATCAAAACTCATCTGTT 57.228 32.000 0.00 0.00 0.00 3.16
681 994 8.900781 CATAATCTCCAATCAAAACTCATCTGT 58.099 33.333 0.00 0.00 0.00 3.41
682 995 8.350722 CCATAATCTCCAATCAAAACTCATCTG 58.649 37.037 0.00 0.00 0.00 2.90
683 996 7.504911 CCCATAATCTCCAATCAAAACTCATCT 59.495 37.037 0.00 0.00 0.00 2.90
684 997 7.255730 CCCCATAATCTCCAATCAAAACTCATC 60.256 40.741 0.00 0.00 0.00 2.92
685 998 6.552350 CCCCATAATCTCCAATCAAAACTCAT 59.448 38.462 0.00 0.00 0.00 2.90
686 999 5.893255 CCCCATAATCTCCAATCAAAACTCA 59.107 40.000 0.00 0.00 0.00 3.41
687 1000 6.129179 TCCCCATAATCTCCAATCAAAACTC 58.871 40.000 0.00 0.00 0.00 3.01
688 1001 6.091076 TCCCCATAATCTCCAATCAAAACT 57.909 37.500 0.00 0.00 0.00 2.66
689 1002 6.607198 TCTTCCCCATAATCTCCAATCAAAAC 59.393 38.462 0.00 0.00 0.00 2.43
690 1003 6.740693 TCTTCCCCATAATCTCCAATCAAAA 58.259 36.000 0.00 0.00 0.00 2.44
691 1004 6.339999 TCTTCCCCATAATCTCCAATCAAA 57.660 37.500 0.00 0.00 0.00 2.69
692 1005 5.163055 CCTCTTCCCCATAATCTCCAATCAA 60.163 44.000 0.00 0.00 0.00 2.57
693 1006 4.352001 CCTCTTCCCCATAATCTCCAATCA 59.648 45.833 0.00 0.00 0.00 2.57
694 1007 4.263683 CCCTCTTCCCCATAATCTCCAATC 60.264 50.000 0.00 0.00 0.00 2.67
695 1008 3.659686 CCCTCTTCCCCATAATCTCCAAT 59.340 47.826 0.00 0.00 0.00 3.16
696 1009 3.056080 CCCTCTTCCCCATAATCTCCAA 58.944 50.000 0.00 0.00 0.00 3.53
697 1010 2.700225 CCCCTCTTCCCCATAATCTCCA 60.700 54.545 0.00 0.00 0.00 3.86
698 1011 1.988846 CCCCTCTTCCCCATAATCTCC 59.011 57.143 0.00 0.00 0.00 3.71
699 1012 1.352687 GCCCCTCTTCCCCATAATCTC 59.647 57.143 0.00 0.00 0.00 2.75
700 1013 1.060244 AGCCCCTCTTCCCCATAATCT 60.060 52.381 0.00 0.00 0.00 2.40
701 1014 1.450360 AGCCCCTCTTCCCCATAATC 58.550 55.000 0.00 0.00 0.00 1.75
702 1015 2.349445 GTAGCCCCTCTTCCCCATAAT 58.651 52.381 0.00 0.00 0.00 1.28
703 1016 1.010294 TGTAGCCCCTCTTCCCCATAA 59.990 52.381 0.00 0.00 0.00 1.90
704 1017 0.645496 TGTAGCCCCTCTTCCCCATA 59.355 55.000 0.00 0.00 0.00 2.74
705 1018 0.988678 GTGTAGCCCCTCTTCCCCAT 60.989 60.000 0.00 0.00 0.00 4.00
706 1019 1.615424 GTGTAGCCCCTCTTCCCCA 60.615 63.158 0.00 0.00 0.00 4.96
707 1020 2.732619 CGTGTAGCCCCTCTTCCCC 61.733 68.421 0.00 0.00 0.00 4.81
708 1021 2.901042 CGTGTAGCCCCTCTTCCC 59.099 66.667 0.00 0.00 0.00 3.97
709 1022 2.187163 GCGTGTAGCCCCTCTTCC 59.813 66.667 0.00 0.00 40.81 3.46
719 1032 2.152489 GTCAACGTGTAACTGCGTGTAG 59.848 50.000 0.00 0.00 41.42 2.74
720 1033 2.118683 GTCAACGTGTAACTGCGTGTA 58.881 47.619 0.00 0.00 41.42 2.90
721 1034 0.925466 GTCAACGTGTAACTGCGTGT 59.075 50.000 0.00 0.00 41.42 4.49
722 1035 1.205657 AGTCAACGTGTAACTGCGTG 58.794 50.000 0.00 0.00 41.42 5.34
723 1036 2.606308 CCTAGTCAACGTGTAACTGCGT 60.606 50.000 7.73 0.00 43.64 5.24
724 1037 1.983605 CCTAGTCAACGTGTAACTGCG 59.016 52.381 7.73 0.00 31.75 5.18
725 1038 3.293311 TCCTAGTCAACGTGTAACTGC 57.707 47.619 7.73 0.00 31.75 4.40
726 1039 5.710984 AGAATCCTAGTCAACGTGTAACTG 58.289 41.667 7.73 0.00 31.75 3.16
727 1040 5.979288 AGAATCCTAGTCAACGTGTAACT 57.021 39.130 0.00 0.00 31.75 2.24
728 1041 6.867293 AGAAAGAATCCTAGTCAACGTGTAAC 59.133 38.462 0.00 0.00 0.00 2.50
729 1042 6.989659 AGAAAGAATCCTAGTCAACGTGTAA 58.010 36.000 0.00 0.00 0.00 2.41
730 1043 6.585695 AGAAAGAATCCTAGTCAACGTGTA 57.414 37.500 0.00 0.00 0.00 2.90
731 1044 5.470047 AGAAAGAATCCTAGTCAACGTGT 57.530 39.130 0.00 0.00 0.00 4.49
732 1045 6.647067 AGAAAGAAAGAATCCTAGTCAACGTG 59.353 38.462 0.00 0.00 0.00 4.49
733 1046 6.760291 AGAAAGAAAGAATCCTAGTCAACGT 58.240 36.000 0.00 0.00 0.00 3.99
734 1047 8.648968 GTTAGAAAGAAAGAATCCTAGTCAACG 58.351 37.037 0.00 0.00 0.00 4.10
735 1048 9.713713 AGTTAGAAAGAAAGAATCCTAGTCAAC 57.286 33.333 0.00 0.00 0.00 3.18
745 1058 9.674068 GGGAGTGATTAGTTAGAAAGAAAGAAT 57.326 33.333 0.00 0.00 0.00 2.40
746 1059 8.101419 GGGGAGTGATTAGTTAGAAAGAAAGAA 58.899 37.037 0.00 0.00 0.00 2.52
747 1060 7.311109 GGGGGAGTGATTAGTTAGAAAGAAAGA 60.311 40.741 0.00 0.00 0.00 2.52
748 1061 6.824196 GGGGGAGTGATTAGTTAGAAAGAAAG 59.176 42.308 0.00 0.00 0.00 2.62
749 1062 6.718294 GGGGGAGTGATTAGTTAGAAAGAAA 58.282 40.000 0.00 0.00 0.00 2.52
750 1063 6.309389 GGGGGAGTGATTAGTTAGAAAGAA 57.691 41.667 0.00 0.00 0.00 2.52
751 1064 5.952347 GGGGGAGTGATTAGTTAGAAAGA 57.048 43.478 0.00 0.00 0.00 2.52
773 1086 1.488390 CCCACCCCATGAAAATCAGG 58.512 55.000 0.00 0.00 0.00 3.86
774 1087 0.826062 GCCCACCCCATGAAAATCAG 59.174 55.000 0.00 0.00 0.00 2.90
775 1088 0.617249 GGCCCACCCCATGAAAATCA 60.617 55.000 0.00 0.00 0.00 2.57
776 1089 2.211375 GGCCCACCCCATGAAAATC 58.789 57.895 0.00 0.00 0.00 2.17
777 1090 4.478531 GGCCCACCCCATGAAAAT 57.521 55.556 0.00 0.00 0.00 1.82
790 1103 0.121402 ATTATAGGGGAGAGGGGCCC 59.879 60.000 17.12 17.12 45.25 5.80
791 1104 1.081343 AGATTATAGGGGAGAGGGGCC 59.919 57.143 0.00 0.00 0.00 5.80
792 1105 2.473070 GAGATTATAGGGGAGAGGGGC 58.527 57.143 0.00 0.00 0.00 5.80
793 1106 2.387160 TGGAGATTATAGGGGAGAGGGG 59.613 54.545 0.00 0.00 0.00 4.79
794 1107 3.854801 TGGAGATTATAGGGGAGAGGG 57.145 52.381 0.00 0.00 0.00 4.30
795 1108 5.345418 TGATTGGAGATTATAGGGGAGAGG 58.655 45.833 0.00 0.00 0.00 3.69
796 1109 6.942163 TTGATTGGAGATTATAGGGGAGAG 57.058 41.667 0.00 0.00 0.00 3.20
797 1110 7.705912 TTTTGATTGGAGATTATAGGGGAGA 57.294 36.000 0.00 0.00 0.00 3.71
798 1111 8.946797 AATTTTGATTGGAGATTATAGGGGAG 57.053 34.615 0.00 0.00 0.00 4.30
799 1112 8.510283 TGAATTTTGATTGGAGATTATAGGGGA 58.490 33.333 0.00 0.00 0.00 4.81
800 1113 8.710749 TGAATTTTGATTGGAGATTATAGGGG 57.289 34.615 0.00 0.00 0.00 4.79
838 1151 9.698309 GCTACACATACATAGATTTACACAGAT 57.302 33.333 0.00 0.00 0.00 2.90
839 1152 8.691797 TGCTACACATACATAGATTTACACAGA 58.308 33.333 0.00 0.00 0.00 3.41
840 1153 8.871686 TGCTACACATACATAGATTTACACAG 57.128 34.615 0.00 0.00 0.00 3.66
841 1154 9.830975 AATGCTACACATACATAGATTTACACA 57.169 29.630 0.00 0.00 38.34 3.72
846 1159 9.411801 CGAGTAATGCTACACATACATAGATTT 57.588 33.333 0.00 0.00 38.34 2.17
847 1160 8.577296 ACGAGTAATGCTACACATACATAGATT 58.423 33.333 0.00 0.00 38.34 2.40
848 1161 8.112016 ACGAGTAATGCTACACATACATAGAT 57.888 34.615 0.00 0.00 38.34 1.98
849 1162 7.506328 ACGAGTAATGCTACACATACATAGA 57.494 36.000 0.00 0.00 38.34 1.98
850 1163 7.648112 ACAACGAGTAATGCTACACATACATAG 59.352 37.037 0.00 0.00 38.34 2.23
851 1164 7.485810 ACAACGAGTAATGCTACACATACATA 58.514 34.615 0.00 0.00 38.34 2.29
852 1165 6.338146 ACAACGAGTAATGCTACACATACAT 58.662 36.000 0.00 0.00 38.34 2.29
853 1166 5.716094 ACAACGAGTAATGCTACACATACA 58.284 37.500 0.00 0.00 38.34 2.29
854 1167 6.748658 TGTACAACGAGTAATGCTACACATAC 59.251 38.462 0.00 0.00 38.34 2.39
855 1168 6.748658 GTGTACAACGAGTAATGCTACACATA 59.251 38.462 0.00 0.00 38.34 2.29
856 1169 5.575606 GTGTACAACGAGTAATGCTACACAT 59.424 40.000 0.00 0.00 42.30 3.21
857 1170 4.919168 GTGTACAACGAGTAATGCTACACA 59.081 41.667 0.00 0.00 35.94 3.72
858 1171 4.919168 TGTGTACAACGAGTAATGCTACAC 59.081 41.667 0.00 0.00 36.15 2.90
859 1172 5.123805 TGTGTACAACGAGTAATGCTACA 57.876 39.130 0.00 0.00 33.72 2.74
860 1173 5.159209 ACTGTGTACAACGAGTAATGCTAC 58.841 41.667 0.00 0.00 33.72 3.58
861 1174 5.381174 ACTGTGTACAACGAGTAATGCTA 57.619 39.130 0.00 0.00 33.72 3.49
862 1175 4.252971 ACTGTGTACAACGAGTAATGCT 57.747 40.909 0.00 0.00 33.72 3.79
863 1176 7.567048 GCATATACTGTGTACAACGAGTAATGC 60.567 40.741 22.14 22.14 34.89 3.56
864 1177 7.434013 TGCATATACTGTGTACAACGAGTAATG 59.566 37.037 12.32 14.95 33.72 1.90
865 1178 7.434307 GTGCATATACTGTGTACAACGAGTAAT 59.566 37.037 12.32 7.02 33.72 1.89
866 1179 6.748658 GTGCATATACTGTGTACAACGAGTAA 59.251 38.462 12.32 5.60 33.72 2.24
867 1180 6.094464 AGTGCATATACTGTGTACAACGAGTA 59.906 38.462 0.00 5.17 35.07 2.59
868 1181 5.100259 GTGCATATACTGTGTACAACGAGT 58.900 41.667 0.00 2.86 33.20 4.18
869 1182 5.340803 AGTGCATATACTGTGTACAACGAG 58.659 41.667 0.00 0.00 35.07 4.18
870 1183 5.106078 TGAGTGCATATACTGTGTACAACGA 60.106 40.000 0.00 0.00 35.07 3.85
871 1184 5.099575 TGAGTGCATATACTGTGTACAACG 58.900 41.667 0.00 0.00 35.07 4.10
872 1185 6.074835 CGATGAGTGCATATACTGTGTACAAC 60.075 42.308 0.00 0.00 35.07 3.32
873 1186 5.977129 CGATGAGTGCATATACTGTGTACAA 59.023 40.000 0.00 0.00 35.07 2.41
874 1187 5.298276 TCGATGAGTGCATATACTGTGTACA 59.702 40.000 0.00 0.00 35.07 2.90
875 1188 5.758924 TCGATGAGTGCATATACTGTGTAC 58.241 41.667 0.00 0.00 34.11 2.90
876 1189 6.349363 GGATCGATGAGTGCATATACTGTGTA 60.349 42.308 0.54 0.00 34.11 2.90
877 1190 4.918810 TCGATGAGTGCATATACTGTGT 57.081 40.909 0.00 0.00 34.11 3.72
878 1191 4.861462 GGATCGATGAGTGCATATACTGTG 59.139 45.833 0.54 0.00 34.11 3.66
879 1192 4.769488 AGGATCGATGAGTGCATATACTGT 59.231 41.667 0.54 0.00 34.11 3.55
880 1193 5.125257 AGAGGATCGATGAGTGCATATACTG 59.875 44.000 0.54 0.00 42.67 2.74
961 1556 9.402320 AGCGATCATGTACTGAGATTACTATAT 57.598 33.333 0.00 0.00 37.28 0.86
1011 1894 0.615850 AACTAGCAGGAGAAGCCACC 59.384 55.000 0.00 0.00 40.02 4.61
1015 1898 2.028567 AGTGTGAACTAGCAGGAGAAGC 60.029 50.000 0.00 0.00 0.00 3.86
1040 1940 2.179547 TGAAGTGTGCTGGTGTGCG 61.180 57.895 0.00 0.00 35.36 5.34
1042 1942 0.659427 CTGTGAAGTGTGCTGGTGTG 59.341 55.000 0.00 0.00 0.00 3.82
1047 1947 2.225019 GGATGAACTGTGAAGTGTGCTG 59.775 50.000 0.00 0.00 0.00 4.41
1074 1974 4.748892 TGAAGCCATTAGAGAAGAAGACG 58.251 43.478 0.00 0.00 0.00 4.18
1347 2247 1.271102 GAACCAAAAGGCAACCGCATA 59.729 47.619 0.00 0.00 41.24 3.14
1393 2293 2.203266 TTGGCCGTGCACATGTCA 60.203 55.556 18.64 12.18 0.00 3.58
1530 2439 3.677284 ATGCACTCGCTCCTGCAGG 62.677 63.158 27.87 27.87 46.26 4.85
1629 2552 2.489329 ACATGGAAGCACAAGCATACAC 59.511 45.455 0.00 0.00 45.49 2.90
1642 2565 5.149973 AGCTAGCATCTCATACATGGAAG 57.850 43.478 18.83 0.00 0.00 3.46
1643 2566 5.557576 AAGCTAGCATCTCATACATGGAA 57.442 39.130 18.83 0.00 0.00 3.53
1684 2607 8.723311 ATTTCATGAAAGTTAACGATTTCCGTA 58.277 29.630 24.17 0.00 41.36 4.02
1685 2608 7.590279 ATTTCATGAAAGTTAACGATTTCCGT 58.410 30.769 24.17 0.97 42.87 4.69
1712 3163 9.132521 ACGTATTGAACAGTAGTACATGTTAAC 57.867 33.333 2.30 0.00 39.66 2.01
1725 3176 9.554724 CTGCAAATTTATTACGTATTGAACAGT 57.445 29.630 8.20 0.00 0.00 3.55
1728 3179 8.721476 CGACTGCAAATTTATTACGTATTGAAC 58.279 33.333 8.20 0.00 0.00 3.18
1729 3180 8.444715 ACGACTGCAAATTTATTACGTATTGAA 58.555 29.630 8.20 3.37 0.00 2.69
1730 3181 7.966111 ACGACTGCAAATTTATTACGTATTGA 58.034 30.769 8.20 0.00 0.00 2.57
1731 3182 8.595781 AACGACTGCAAATTTATTACGTATTG 57.404 30.769 0.00 0.00 0.00 1.90
1842 3299 5.810074 CGAACCCACAAAATTTCAGACTTTT 59.190 36.000 0.00 0.00 0.00 2.27
1960 3457 5.359756 AGCCACAAATTTCAGACTTTTTCC 58.640 37.500 0.00 0.00 0.00 3.13
1961 3458 6.291796 CGAAGCCACAAATTTCAGACTTTTTC 60.292 38.462 0.00 0.00 0.00 2.29
1967 3464 3.896648 TCGAAGCCACAAATTTCAGAC 57.103 42.857 0.00 0.00 0.00 3.51
1975 3472 1.606668 GGACATGTTCGAAGCCACAAA 59.393 47.619 0.00 0.00 0.00 2.83
1978 3475 1.234821 TTGGACATGTTCGAAGCCAC 58.765 50.000 0.00 0.00 0.00 5.01
1988 3485 6.832520 TGCAAGTAATACATTTGGACATGT 57.167 33.333 0.00 0.00 40.61 3.21
2107 3907 5.927689 TGCTCAAATTTGATGGTGAAATGAC 59.072 36.000 20.76 4.24 36.46 3.06
2138 3938 2.764572 GCTCCTACTGCTACCCACTAAA 59.235 50.000 0.00 0.00 0.00 1.85
2141 3941 0.336737 AGCTCCTACTGCTACCCACT 59.663 55.000 0.00 0.00 39.21 4.00
2143 3943 0.631753 AGAGCTCCTACTGCTACCCA 59.368 55.000 10.93 0.00 41.30 4.51
2144 3944 1.036707 CAGAGCTCCTACTGCTACCC 58.963 60.000 10.93 0.00 41.30 3.69
2150 3950 2.027745 TGAAAAGGCAGAGCTCCTACTG 60.028 50.000 10.93 2.88 37.22 2.74
2151 3951 2.260822 TGAAAAGGCAGAGCTCCTACT 58.739 47.619 10.93 2.71 32.65 2.57
2152 3952 2.770164 TGAAAAGGCAGAGCTCCTAC 57.230 50.000 10.93 0.00 32.65 3.18
2153 3953 5.636903 ATAATGAAAAGGCAGAGCTCCTA 57.363 39.130 10.93 0.00 32.65 2.94
2154 3954 2.895242 AATGAAAAGGCAGAGCTCCT 57.105 45.000 10.93 0.00 34.90 3.69
2155 3955 4.215185 GCTATAATGAAAAGGCAGAGCTCC 59.785 45.833 10.93 0.00 0.00 4.70
2156 3956 4.818546 TGCTATAATGAAAAGGCAGAGCTC 59.181 41.667 5.27 5.27 0.00 4.09
2157 3957 4.785301 TGCTATAATGAAAAGGCAGAGCT 58.215 39.130 0.00 0.00 0.00 4.09
2158 3958 4.023365 CCTGCTATAATGAAAAGGCAGAGC 60.023 45.833 13.27 0.00 46.65 4.09
2159 3959 4.518211 CCCTGCTATAATGAAAAGGCAGAG 59.482 45.833 13.27 0.00 46.65 3.35
2160 3960 4.165950 TCCCTGCTATAATGAAAAGGCAGA 59.834 41.667 13.27 0.00 46.65 4.26
2161 3961 4.464008 TCCCTGCTATAATGAAAAGGCAG 58.536 43.478 0.00 0.00 44.35 4.85
2162 3962 4.518278 TCCCTGCTATAATGAAAAGGCA 57.482 40.909 0.00 0.00 0.00 4.75
2163 3963 5.852282 TTTCCCTGCTATAATGAAAAGGC 57.148 39.130 0.00 0.00 0.00 4.35
2164 3964 7.761249 CACTTTTTCCCTGCTATAATGAAAAGG 59.239 37.037 0.00 0.00 36.58 3.11
2165 3965 8.306761 ACACTTTTTCCCTGCTATAATGAAAAG 58.693 33.333 0.00 0.00 36.58 2.27
2166 3966 8.189119 ACACTTTTTCCCTGCTATAATGAAAA 57.811 30.769 0.00 0.00 34.22 2.29
2167 3967 7.775053 ACACTTTTTCCCTGCTATAATGAAA 57.225 32.000 0.00 0.00 0.00 2.69
2168 3968 7.775053 AACACTTTTTCCCTGCTATAATGAA 57.225 32.000 0.00 0.00 0.00 2.57
2169 3969 7.885922 TGTAACACTTTTTCCCTGCTATAATGA 59.114 33.333 0.00 0.00 0.00 2.57
2170 3970 8.050778 TGTAACACTTTTTCCCTGCTATAATG 57.949 34.615 0.00 0.00 0.00 1.90
2171 3971 8.644374 TTGTAACACTTTTTCCCTGCTATAAT 57.356 30.769 0.00 0.00 0.00 1.28
2172 3972 8.644374 ATTGTAACACTTTTTCCCTGCTATAA 57.356 30.769 0.00 0.00 0.00 0.98
2173 3973 8.519526 CAATTGTAACACTTTTTCCCTGCTATA 58.480 33.333 0.00 0.00 0.00 1.31
2174 3974 7.232534 TCAATTGTAACACTTTTTCCCTGCTAT 59.767 33.333 5.13 0.00 0.00 2.97
2175 3975 6.547880 TCAATTGTAACACTTTTTCCCTGCTA 59.452 34.615 5.13 0.00 0.00 3.49
2176 3976 5.362430 TCAATTGTAACACTTTTTCCCTGCT 59.638 36.000 5.13 0.00 0.00 4.24
2177 3977 5.596845 TCAATTGTAACACTTTTTCCCTGC 58.403 37.500 5.13 0.00 0.00 4.85
2178 3978 8.387354 GTTTTCAATTGTAACACTTTTTCCCTG 58.613 33.333 16.14 0.00 0.00 4.45
2179 3979 8.318412 AGTTTTCAATTGTAACACTTTTTCCCT 58.682 29.630 20.34 2.39 0.00 4.20
2180 3980 8.487313 AGTTTTCAATTGTAACACTTTTTCCC 57.513 30.769 20.34 0.12 0.00 3.97
2184 3984 9.915629 TGTGTAGTTTTCAATTGTAACACTTTT 57.084 25.926 20.34 8.46 37.47 2.27
2185 3985 9.915629 TTGTGTAGTTTTCAATTGTAACACTTT 57.084 25.926 20.34 8.71 37.47 2.66
2187 3987 9.515020 CATTGTGTAGTTTTCAATTGTAACACT 57.485 29.630 20.34 16.61 37.47 3.55
2188 3988 9.296400 ACATTGTGTAGTTTTCAATTGTAACAC 57.704 29.630 20.34 15.29 37.18 3.32
2193 3993 9.677567 GATGTACATTGTGTAGTTTTCAATTGT 57.322 29.630 10.30 0.00 32.84 2.71
2194 3994 9.676195 TGATGTACATTGTGTAGTTTTCAATTG 57.324 29.630 10.30 0.00 32.84 2.32
2195 3995 9.677567 GTGATGTACATTGTGTAGTTTTCAATT 57.322 29.630 10.30 0.00 32.84 2.32
2196 3996 8.015087 CGTGATGTACATTGTGTAGTTTTCAAT 58.985 33.333 10.30 0.00 32.84 2.57
2197 3997 7.348956 CGTGATGTACATTGTGTAGTTTTCAA 58.651 34.615 10.30 0.00 32.84 2.69
2198 3998 6.565060 GCGTGATGTACATTGTGTAGTTTTCA 60.565 38.462 10.30 0.00 32.84 2.69
2199 3999 5.788531 GCGTGATGTACATTGTGTAGTTTTC 59.211 40.000 10.30 0.00 32.84 2.29
2200 4000 5.237561 TGCGTGATGTACATTGTGTAGTTTT 59.762 36.000 10.30 0.00 32.84 2.43
2201 4001 4.752604 TGCGTGATGTACATTGTGTAGTTT 59.247 37.500 10.30 0.00 32.84 2.66
2202 4002 4.311606 TGCGTGATGTACATTGTGTAGTT 58.688 39.130 10.30 0.00 32.84 2.24
2203 4003 3.920446 TGCGTGATGTACATTGTGTAGT 58.080 40.909 10.30 0.00 32.84 2.73
2204 4004 4.201714 CCTTGCGTGATGTACATTGTGTAG 60.202 45.833 10.30 4.20 32.84 2.74
2205 4005 3.682377 CCTTGCGTGATGTACATTGTGTA 59.318 43.478 10.30 0.00 0.00 2.90
2206 4006 2.483877 CCTTGCGTGATGTACATTGTGT 59.516 45.455 10.30 0.00 0.00 3.72
2207 4007 2.483877 ACCTTGCGTGATGTACATTGTG 59.516 45.455 10.30 3.95 0.00 3.33
2208 4008 2.742053 GACCTTGCGTGATGTACATTGT 59.258 45.455 10.30 0.00 0.00 2.71
2209 4009 3.002791 AGACCTTGCGTGATGTACATTG 58.997 45.455 10.30 4.67 0.00 2.82
2210 4010 3.002791 CAGACCTTGCGTGATGTACATT 58.997 45.455 10.30 0.00 0.00 2.71
2211 4011 2.233676 TCAGACCTTGCGTGATGTACAT 59.766 45.455 8.43 8.43 0.00 2.29
2228 4028 4.344865 GCCCGGCCCTGTTTCAGA 62.345 66.667 0.00 0.00 32.44 3.27
2342 4142 8.597662 ACATAATTTGTTACGTAAGACACTGT 57.402 30.769 8.60 3.35 36.26 3.55
2343 4143 9.313323 CAACATAATTTGTTACGTAAGACACTG 57.687 33.333 8.60 2.77 46.90 3.66
2427 4870 8.557592 TTGATGCATAATCTCCAACTGATATC 57.442 34.615 0.00 0.00 36.15 1.63
2434 4877 7.221452 GTCAAACATTGATGCATAATCTCCAAC 59.779 37.037 0.00 0.00 42.47 3.77
2468 4911 5.580998 AGACTAGGTGAGTTAGATGGTTCA 58.419 41.667 0.00 0.00 39.06 3.18
2469 4912 6.071278 ACAAGACTAGGTGAGTTAGATGGTTC 60.071 42.308 0.00 0.00 39.06 3.62
2472 4915 5.186021 ACACAAGACTAGGTGAGTTAGATGG 59.814 44.000 12.65 0.00 39.06 3.51
2473 4916 6.274157 ACACAAGACTAGGTGAGTTAGATG 57.726 41.667 12.65 0.00 39.06 2.90
2474 4917 5.419471 GGACACAAGACTAGGTGAGTTAGAT 59.581 44.000 12.65 0.00 39.06 1.98
2512 4955 8.613482 TCCTCGATTAAAGATCATAGTATAGCG 58.387 37.037 0.00 0.00 0.00 4.26
2559 5002 6.694447 ACTTTTCACATGGATCAATGGAAAG 58.306 36.000 21.87 21.87 35.04 2.62
2560 5003 6.669125 ACTTTTCACATGGATCAATGGAAA 57.331 33.333 14.72 15.85 31.07 3.13
2561 5004 6.669125 AACTTTTCACATGGATCAATGGAA 57.331 33.333 14.72 11.39 31.46 3.53
2562 5005 7.773489 TTAACTTTTCACATGGATCAATGGA 57.227 32.000 14.72 6.16 31.46 3.41
2610 5053 9.716556 AGAGTCTTACTCCAAATTCTATTCCTA 57.283 33.333 3.49 0.00 46.18 2.94
2611 5054 8.482128 CAGAGTCTTACTCCAAATTCTATTCCT 58.518 37.037 3.49 0.00 46.18 3.36
2612 5055 8.478877 TCAGAGTCTTACTCCAAATTCTATTCC 58.521 37.037 3.49 0.00 46.18 3.01
2613 5056 9.877178 TTCAGAGTCTTACTCCAAATTCTATTC 57.123 33.333 3.49 0.00 46.18 1.75
2617 5060 9.660180 GTATTTCAGAGTCTTACTCCAAATTCT 57.340 33.333 14.82 1.99 46.18 2.40
2618 5061 9.660180 AGTATTTCAGAGTCTTACTCCAAATTC 57.340 33.333 14.82 11.71 46.18 2.17
2619 5062 9.660180 GAGTATTTCAGAGTCTTACTCCAAATT 57.340 33.333 14.87 6.09 46.18 1.82
2620 5063 8.816894 TGAGTATTTCAGAGTCTTACTCCAAAT 58.183 33.333 19.92 14.35 46.18 2.32
2621 5064 8.190326 TGAGTATTTCAGAGTCTTACTCCAAA 57.810 34.615 19.92 5.99 46.18 3.28
2622 5065 7.776618 TGAGTATTTCAGAGTCTTACTCCAA 57.223 36.000 19.92 6.51 46.18 3.53
2623 5066 7.068839 GGATGAGTATTTCAGAGTCTTACTCCA 59.931 40.741 19.92 12.29 46.18 3.86
2624 5067 7.286775 AGGATGAGTATTTCAGAGTCTTACTCC 59.713 40.741 19.92 10.71 46.18 3.85
2625 5068 8.232913 AGGATGAGTATTTCAGAGTCTTACTC 57.767 38.462 17.47 17.47 45.38 2.59
2626 5069 9.875708 ATAGGATGAGTATTTCAGAGTCTTACT 57.124 33.333 2.49 2.49 39.68 2.24
2648 5091 9.878599 CGCCTAATTAACTGAACATTTTATAGG 57.121 33.333 0.00 0.00 0.00 2.57
2651 5094 8.736244 ACACGCCTAATTAACTGAACATTTTAT 58.264 29.630 0.00 0.00 0.00 1.40
2652 5095 8.101654 ACACGCCTAATTAACTGAACATTTTA 57.898 30.769 0.00 0.00 0.00 1.52
2653 5096 6.977213 ACACGCCTAATTAACTGAACATTTT 58.023 32.000 0.00 0.00 0.00 1.82
2654 5097 6.349033 GGACACGCCTAATTAACTGAACATTT 60.349 38.462 0.00 0.00 0.00 2.32
2655 5098 5.123344 GGACACGCCTAATTAACTGAACATT 59.877 40.000 0.00 0.00 0.00 2.71
2668 5111 1.128809 TTTGGGAGGGACACGCCTAA 61.129 55.000 0.00 0.00 37.72 2.69
2669 5112 1.128809 TTTTGGGAGGGACACGCCTA 61.129 55.000 0.00 0.00 39.30 3.93
2670 5113 2.411765 CTTTTGGGAGGGACACGCCT 62.412 60.000 0.00 0.00 39.30 5.52
2671 5114 1.971695 CTTTTGGGAGGGACACGCC 60.972 63.158 0.00 0.00 38.49 5.68
2672 5115 0.955919 CTCTTTTGGGAGGGACACGC 60.956 60.000 0.00 0.00 0.00 5.34
2706 5149 2.999331 GGTTGTTGCCAGCCTAATCTA 58.001 47.619 0.00 0.00 38.81 1.98
2716 5159 2.594303 CGCCTGAGGTTGTTGCCA 60.594 61.111 0.00 0.00 0.00 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.