Multiple sequence alignment - TraesCS7A01G052900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G052900 chr7A 100.000 3662 0 0 1 3662 25745344 25749005 0.000000e+00 6763.0
1 TraesCS7A01G052900 chr7A 92.855 2743 138 20 901 3627 25689081 25691781 0.000000e+00 3927.0
2 TraesCS7A01G052900 chr7A 92.272 2342 152 12 940 3258 37726659 37724324 0.000000e+00 3295.0
3 TraesCS7A01G052900 chr7A 91.520 342 25 2 3289 3630 37724328 37723991 5.540000e-128 468.0
4 TraesCS7A01G052900 chr7A 90.323 93 9 0 804 896 733811085 733811177 4.970000e-24 122.0
5 TraesCS7A01G052900 chr7D 94.732 2259 102 7 1380 3627 24942102 24944354 0.000000e+00 3496.0
6 TraesCS7A01G052900 chr7D 92.763 456 17 6 901 1349 24941563 24942009 0.000000e+00 645.0
7 TraesCS7A01G052900 chr4A 93.225 2273 136 11 1363 3627 708618148 708615886 0.000000e+00 3328.0
8 TraesCS7A01G052900 chr4A 87.027 370 38 7 547 912 708620102 708619739 3.400000e-110 409.0
9 TraesCS7A01G052900 chr4A 90.244 123 10 2 426 546 708620378 708620256 3.790000e-35 159.0
10 TraesCS7A01G052900 chr4A 100.000 40 0 0 959 998 708619728 708619689 1.410000e-09 75.0
11 TraesCS7A01G052900 chr4A 92.857 42 2 1 3622 3662 708615862 708615821 3.950000e-05 60.2
12 TraesCS7A01G052900 chr6B 91.579 95 3 4 803 895 581312359 581312450 3.840000e-25 126.0
13 TraesCS7A01G052900 chr4B 89.000 100 10 1 803 901 26800915 26800816 4.970000e-24 122.0
14 TraesCS7A01G052900 chr6A 89.474 95 10 0 804 898 540151661 540151755 1.790000e-23 121.0
15 TraesCS7A01G052900 chr2A 87.736 106 9 3 803 906 422787252 422787149 1.790000e-23 121.0
16 TraesCS7A01G052900 chr1D 89.474 95 10 0 803 897 483910986 483910892 1.790000e-23 121.0
17 TraesCS7A01G052900 chr1D 89.474 95 10 0 803 897 483927301 483927395 1.790000e-23 121.0
18 TraesCS7A01G052900 chr1D 88.660 97 8 1 803 899 404241760 404241853 8.310000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G052900 chr7A 25745344 25749005 3661 False 6763.00 6763 100.0000 1 3662 1 chr7A.!!$F2 3661
1 TraesCS7A01G052900 chr7A 25689081 25691781 2700 False 3927.00 3927 92.8550 901 3627 1 chr7A.!!$F1 2726
2 TraesCS7A01G052900 chr7A 37723991 37726659 2668 True 1881.50 3295 91.8960 940 3630 2 chr7A.!!$R1 2690
3 TraesCS7A01G052900 chr7D 24941563 24944354 2791 False 2070.50 3496 93.7475 901 3627 2 chr7D.!!$F1 2726
4 TraesCS7A01G052900 chr4A 708615821 708620378 4557 True 806.24 3328 92.6706 426 3662 5 chr4A.!!$R1 3236

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 169 0.029834 CCACGGGTAACTATCGTCGG 59.970 60.0 0.00 0.0 34.73 4.79 F
169 170 0.029834 CACGGGTAACTATCGTCGGG 59.970 60.0 0.00 0.0 34.73 5.14 F
179 180 0.033796 TATCGTCGGGTCTCCAAGGT 60.034 55.0 0.00 0.0 0.00 3.50 F
430 431 0.106519 CCACCAACCATCCTGGATCC 60.107 60.0 6.13 4.2 40.96 3.36 F
1782 3292 0.617413 ACTGTGCCAAGGAGGATCTG 59.383 55.0 0.00 0.0 41.22 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 3371 1.078708 CGGTTCGGCAGTACCCATT 60.079 57.895 7.05 0.0 34.71 3.16 R
1875 3385 1.141053 GCATCCTGTATCTTCCCGGTT 59.859 52.381 0.00 0.0 0.00 4.44 R
2043 3553 2.203195 GCAGCCAGTGGTGTGTCA 60.203 61.111 11.74 0.0 42.04 3.58 R
2286 3796 0.244721 GCAGCTCCCCATTTTCACAC 59.755 55.000 0.00 0.0 0.00 3.82 R
3500 5042 0.037139 CAAGAGCTGAGCTGCTGACT 60.037 55.000 13.71 0.0 44.17 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.909708 GACATCCGTCAAATTTATTGATCAAA 57.090 30.769 13.09 0.00 42.13 2.69
26 27 9.352784 GACATCCGTCAAATTTATTGATCAAAA 57.647 29.630 13.09 3.45 42.13 2.44
27 28 9.357652 ACATCCGTCAAATTTATTGATCAAAAG 57.642 29.630 13.09 0.00 0.00 2.27
28 29 9.571810 CATCCGTCAAATTTATTGATCAAAAGA 57.428 29.630 13.09 1.35 0.00 2.52
30 31 9.624697 TCCGTCAAATTTATTGATCAAAAGAAG 57.375 29.630 13.09 5.43 0.00 2.85
31 32 8.375465 CCGTCAAATTTATTGATCAAAAGAAGC 58.625 33.333 13.09 0.00 0.00 3.86
32 33 8.914654 CGTCAAATTTATTGATCAAAAGAAGCA 58.085 29.630 13.09 0.00 0.00 3.91
45 46 9.508567 GATCAAAAGAAGCATTATAGAAACACC 57.491 33.333 0.00 0.00 0.00 4.16
46 47 8.635765 TCAAAAGAAGCATTATAGAAACACCT 57.364 30.769 0.00 0.00 0.00 4.00
47 48 9.077885 TCAAAAGAAGCATTATAGAAACACCTT 57.922 29.630 0.00 0.00 0.00 3.50
48 49 9.346725 CAAAAGAAGCATTATAGAAACACCTTC 57.653 33.333 0.00 0.00 0.00 3.46
49 50 8.635765 AAAGAAGCATTATAGAAACACCTTCA 57.364 30.769 0.00 0.00 36.40 3.02
50 51 8.635765 AAGAAGCATTATAGAAACACCTTCAA 57.364 30.769 0.00 0.00 36.40 2.69
51 52 8.273780 AGAAGCATTATAGAAACACCTTCAAG 57.726 34.615 0.00 0.00 36.40 3.02
52 53 7.337942 AGAAGCATTATAGAAACACCTTCAAGG 59.662 37.037 0.22 0.22 42.49 3.61
53 54 6.721318 AGCATTATAGAAACACCTTCAAGGA 58.279 36.000 11.59 0.00 37.67 3.36
54 55 7.175104 AGCATTATAGAAACACCTTCAAGGAA 58.825 34.615 11.59 0.00 37.67 3.36
55 56 7.337942 AGCATTATAGAAACACCTTCAAGGAAG 59.662 37.037 11.59 4.67 37.67 3.46
56 57 7.336931 GCATTATAGAAACACCTTCAAGGAAGA 59.663 37.037 11.59 0.00 41.71 2.87
57 58 9.231297 CATTATAGAAACACCTTCAAGGAAGAA 57.769 33.333 11.59 0.00 41.71 2.52
58 59 9.807921 ATTATAGAAACACCTTCAAGGAAGAAA 57.192 29.630 11.59 0.00 41.71 2.52
59 60 7.751768 ATAGAAACACCTTCAAGGAAGAAAG 57.248 36.000 11.59 0.00 41.71 2.62
60 61 4.339530 AGAAACACCTTCAAGGAAGAAAGC 59.660 41.667 11.59 0.00 41.71 3.51
61 62 3.297134 ACACCTTCAAGGAAGAAAGCA 57.703 42.857 11.59 0.00 41.71 3.91
62 63 3.837355 ACACCTTCAAGGAAGAAAGCAT 58.163 40.909 11.59 0.00 41.71 3.79
63 64 4.985538 ACACCTTCAAGGAAGAAAGCATA 58.014 39.130 11.59 0.00 41.71 3.14
64 65 5.006386 ACACCTTCAAGGAAGAAAGCATAG 58.994 41.667 11.59 0.00 41.71 2.23
65 66 4.013050 ACCTTCAAGGAAGAAAGCATAGC 58.987 43.478 11.59 0.00 41.71 2.97
66 67 4.012374 CCTTCAAGGAAGAAAGCATAGCA 58.988 43.478 0.00 0.00 41.71 3.49
67 68 4.460382 CCTTCAAGGAAGAAAGCATAGCAA 59.540 41.667 0.00 0.00 41.71 3.91
68 69 5.047802 CCTTCAAGGAAGAAAGCATAGCAAA 60.048 40.000 0.00 0.00 41.71 3.68
69 70 6.403866 TTCAAGGAAGAAAGCATAGCAAAA 57.596 33.333 0.00 0.00 0.00 2.44
70 71 6.403866 TCAAGGAAGAAAGCATAGCAAAAA 57.596 33.333 0.00 0.00 0.00 1.94
71 72 6.449698 TCAAGGAAGAAAGCATAGCAAAAAG 58.550 36.000 0.00 0.00 0.00 2.27
72 73 5.397142 AGGAAGAAAGCATAGCAAAAAGG 57.603 39.130 0.00 0.00 0.00 3.11
73 74 3.928992 GGAAGAAAGCATAGCAAAAAGGC 59.071 43.478 0.00 0.00 0.00 4.35
85 86 5.678132 AGCAAAAAGGCTAATGCAAAAAG 57.322 34.783 17.70 0.00 43.70 2.27
86 87 5.367302 AGCAAAAAGGCTAATGCAAAAAGA 58.633 33.333 17.70 0.00 43.70 2.52
87 88 5.821995 AGCAAAAAGGCTAATGCAAAAAGAA 59.178 32.000 17.70 0.00 43.70 2.52
88 89 6.318396 AGCAAAAAGGCTAATGCAAAAAGAAA 59.682 30.769 17.70 0.00 43.70 2.52
89 90 6.971756 GCAAAAAGGCTAATGCAAAAAGAAAA 59.028 30.769 12.50 0.00 41.91 2.29
90 91 7.166307 GCAAAAAGGCTAATGCAAAAAGAAAAG 59.834 33.333 12.50 0.00 41.91 2.27
91 92 8.397148 CAAAAAGGCTAATGCAAAAAGAAAAGA 58.603 29.630 0.00 0.00 41.91 2.52
92 93 8.504812 AAAAGGCTAATGCAAAAAGAAAAGAA 57.495 26.923 0.00 0.00 41.91 2.52
93 94 8.504812 AAAGGCTAATGCAAAAAGAAAAGAAA 57.495 26.923 0.00 0.00 41.91 2.52
94 95 8.504812 AAGGCTAATGCAAAAAGAAAAGAAAA 57.495 26.923 0.00 0.00 41.91 2.29
95 96 8.504812 AGGCTAATGCAAAAAGAAAAGAAAAA 57.495 26.923 0.00 0.00 41.91 1.94
124 125 2.756400 GGCACCACCACAGATCCA 59.244 61.111 0.00 0.00 38.86 3.41
125 126 1.074775 GGCACCACCACAGATCCAA 59.925 57.895 0.00 0.00 38.86 3.53
126 127 0.539438 GGCACCACCACAGATCCAAA 60.539 55.000 0.00 0.00 38.86 3.28
127 128 0.598065 GCACCACCACAGATCCAAAC 59.402 55.000 0.00 0.00 0.00 2.93
128 129 1.979855 CACCACCACAGATCCAAACA 58.020 50.000 0.00 0.00 0.00 2.83
129 130 1.608590 CACCACCACAGATCCAAACAC 59.391 52.381 0.00 0.00 0.00 3.32
130 131 1.247567 CCACCACAGATCCAAACACC 58.752 55.000 0.00 0.00 0.00 4.16
131 132 1.478471 CCACCACAGATCCAAACACCA 60.478 52.381 0.00 0.00 0.00 4.17
132 133 1.608590 CACCACAGATCCAAACACCAC 59.391 52.381 0.00 0.00 0.00 4.16
133 134 1.247567 CCACAGATCCAAACACCACC 58.752 55.000 0.00 0.00 0.00 4.61
134 135 1.478471 CCACAGATCCAAACACCACCA 60.478 52.381 0.00 0.00 0.00 4.17
135 136 2.305928 CACAGATCCAAACACCACCAA 58.694 47.619 0.00 0.00 0.00 3.67
136 137 2.034558 CACAGATCCAAACACCACCAAC 59.965 50.000 0.00 0.00 0.00 3.77
137 138 2.305928 CAGATCCAAACACCACCAACA 58.694 47.619 0.00 0.00 0.00 3.33
138 139 2.692557 CAGATCCAAACACCACCAACAA 59.307 45.455 0.00 0.00 0.00 2.83
139 140 2.958355 AGATCCAAACACCACCAACAAG 59.042 45.455 0.00 0.00 0.00 3.16
140 141 0.820871 TCCAAACACCACCAACAAGC 59.179 50.000 0.00 0.00 0.00 4.01
141 142 0.179086 CCAAACACCACCAACAAGCC 60.179 55.000 0.00 0.00 0.00 4.35
142 143 0.179086 CAAACACCACCAACAAGCCC 60.179 55.000 0.00 0.00 0.00 5.19
143 144 0.325203 AAACACCACCAACAAGCCCT 60.325 50.000 0.00 0.00 0.00 5.19
144 145 0.755327 AACACCACCAACAAGCCCTC 60.755 55.000 0.00 0.00 0.00 4.30
145 146 1.903404 CACCACCAACAAGCCCTCC 60.903 63.158 0.00 0.00 0.00 4.30
146 147 2.391130 ACCACCAACAAGCCCTCCA 61.391 57.895 0.00 0.00 0.00 3.86
147 148 1.903404 CCACCAACAAGCCCTCCAC 60.903 63.158 0.00 0.00 0.00 4.02
148 149 1.152777 CACCAACAAGCCCTCCACA 60.153 57.895 0.00 0.00 0.00 4.17
149 150 1.152756 ACCAACAAGCCCTCCACAC 60.153 57.895 0.00 0.00 0.00 3.82
150 151 1.903404 CCAACAAGCCCTCCACACC 60.903 63.158 0.00 0.00 0.00 4.16
151 152 1.152777 CAACAAGCCCTCCACACCA 60.153 57.895 0.00 0.00 0.00 4.17
152 153 1.152756 AACAAGCCCTCCACACCAC 60.153 57.895 0.00 0.00 0.00 4.16
153 154 2.669569 CAAGCCCTCCACACCACG 60.670 66.667 0.00 0.00 0.00 4.94
154 155 3.953775 AAGCCCTCCACACCACGG 61.954 66.667 0.00 0.00 0.00 4.94
157 158 2.605295 CCCTCCACACCACGGGTA 60.605 66.667 0.00 0.00 32.11 3.69
158 159 2.218454 CCCTCCACACCACGGGTAA 61.218 63.158 0.00 0.00 32.11 2.85
159 160 1.004200 CCTCCACACCACGGGTAAC 60.004 63.158 0.00 0.00 32.11 2.50
160 161 1.477685 CCTCCACACCACGGGTAACT 61.478 60.000 0.00 0.00 32.11 2.24
161 162 1.259609 CTCCACACCACGGGTAACTA 58.740 55.000 0.00 0.00 32.11 2.24
162 163 1.829222 CTCCACACCACGGGTAACTAT 59.171 52.381 0.00 0.00 32.11 2.12
163 164 1.826720 TCCACACCACGGGTAACTATC 59.173 52.381 0.00 0.00 32.11 2.08
164 165 1.470285 CCACACCACGGGTAACTATCG 60.470 57.143 0.00 0.00 32.11 2.92
165 166 1.203052 CACACCACGGGTAACTATCGT 59.797 52.381 0.00 0.00 32.11 3.73
166 167 1.474077 ACACCACGGGTAACTATCGTC 59.526 52.381 0.00 0.00 32.11 4.20
167 168 0.734889 ACCACGGGTAACTATCGTCG 59.265 55.000 0.00 0.00 32.11 5.12
168 169 0.029834 CCACGGGTAACTATCGTCGG 59.970 60.000 0.00 0.00 34.73 4.79
169 170 0.029834 CACGGGTAACTATCGTCGGG 59.970 60.000 0.00 0.00 34.73 5.14
170 171 0.394352 ACGGGTAACTATCGTCGGGT 60.394 55.000 0.00 0.00 30.89 5.28
171 172 0.308993 CGGGTAACTATCGTCGGGTC 59.691 60.000 0.00 0.00 0.00 4.46
172 173 1.685148 GGGTAACTATCGTCGGGTCT 58.315 55.000 0.00 0.00 0.00 3.85
173 174 1.606189 GGGTAACTATCGTCGGGTCTC 59.394 57.143 0.00 0.00 0.00 3.36
174 175 1.606189 GGTAACTATCGTCGGGTCTCC 59.394 57.143 0.00 0.00 0.00 3.71
175 176 2.292267 GTAACTATCGTCGGGTCTCCA 58.708 52.381 0.00 0.00 0.00 3.86
176 177 1.843368 AACTATCGTCGGGTCTCCAA 58.157 50.000 0.00 0.00 0.00 3.53
177 178 1.390565 ACTATCGTCGGGTCTCCAAG 58.609 55.000 0.00 0.00 0.00 3.61
178 179 0.669077 CTATCGTCGGGTCTCCAAGG 59.331 60.000 0.00 0.00 0.00 3.61
179 180 0.033796 TATCGTCGGGTCTCCAAGGT 60.034 55.000 0.00 0.00 0.00 3.50
180 181 1.605058 ATCGTCGGGTCTCCAAGGTG 61.605 60.000 0.00 0.00 0.00 4.00
181 182 2.273179 CGTCGGGTCTCCAAGGTGA 61.273 63.158 0.00 0.00 0.00 4.02
182 183 1.292541 GTCGGGTCTCCAAGGTGAC 59.707 63.158 11.80 11.80 37.75 3.67
183 184 2.261671 CGGGTCTCCAAGGTGACG 59.738 66.667 13.37 2.01 38.91 4.35
184 185 2.047179 GGGTCTCCAAGGTGACGC 60.047 66.667 18.35 18.35 41.62 5.19
185 186 2.047179 GGTCTCCAAGGTGACGCC 60.047 66.667 13.37 0.00 38.91 5.68
195 196 3.307379 GGTGACGCCTTCAAGAAGT 57.693 52.632 8.83 0.00 35.39 3.01
196 197 2.450609 GGTGACGCCTTCAAGAAGTA 57.549 50.000 8.83 0.00 35.39 2.24
197 198 2.762745 GGTGACGCCTTCAAGAAGTAA 58.237 47.619 8.83 0.00 35.39 2.24
198 199 3.335579 GGTGACGCCTTCAAGAAGTAAT 58.664 45.455 8.83 0.00 35.39 1.89
199 200 3.125316 GGTGACGCCTTCAAGAAGTAATG 59.875 47.826 8.83 0.00 35.39 1.90
200 201 3.746492 GTGACGCCTTCAAGAAGTAATGT 59.254 43.478 8.83 2.11 35.39 2.71
201 202 3.994392 TGACGCCTTCAAGAAGTAATGTC 59.006 43.478 8.83 10.15 36.72 3.06
202 203 2.993899 ACGCCTTCAAGAAGTAATGTCG 59.006 45.455 8.83 5.20 36.72 4.35
203 204 3.250744 CGCCTTCAAGAAGTAATGTCGA 58.749 45.455 8.83 0.00 36.72 4.20
204 205 3.304559 CGCCTTCAAGAAGTAATGTCGAG 59.695 47.826 8.83 0.00 36.72 4.04
205 206 3.619038 GCCTTCAAGAAGTAATGTCGAGG 59.381 47.826 8.83 0.00 36.72 4.63
206 207 4.620803 GCCTTCAAGAAGTAATGTCGAGGA 60.621 45.833 8.83 0.00 36.72 3.71
207 208 4.865365 CCTTCAAGAAGTAATGTCGAGGAC 59.135 45.833 8.83 0.00 36.72 3.85
208 209 5.462530 TTCAAGAAGTAATGTCGAGGACA 57.537 39.130 0.38 0.38 46.90 4.02
209 210 4.806330 TCAAGAAGTAATGTCGAGGACAC 58.194 43.478 0.00 0.00 45.65 3.67
210 211 4.523173 TCAAGAAGTAATGTCGAGGACACT 59.477 41.667 0.00 0.00 45.65 3.55
211 212 5.708697 TCAAGAAGTAATGTCGAGGACACTA 59.291 40.000 0.00 0.00 45.65 2.74
212 213 5.564048 AGAAGTAATGTCGAGGACACTAC 57.436 43.478 8.79 8.79 45.65 2.73
213 214 4.398673 AGAAGTAATGTCGAGGACACTACC 59.601 45.833 12.19 1.21 43.46 3.18
214 215 3.693807 AGTAATGTCGAGGACACTACCA 58.306 45.455 12.19 0.00 43.46 3.25
215 216 4.279145 AGTAATGTCGAGGACACTACCAT 58.721 43.478 12.19 0.00 43.46 3.55
216 217 3.802948 AATGTCGAGGACACTACCATC 57.197 47.619 0.00 0.00 45.65 3.51
217 218 2.209690 TGTCGAGGACACTACCATCA 57.790 50.000 0.00 0.00 37.67 3.07
218 219 2.735151 TGTCGAGGACACTACCATCAT 58.265 47.619 0.00 0.00 37.67 2.45
219 220 2.427095 TGTCGAGGACACTACCATCATG 59.573 50.000 0.00 0.00 37.67 3.07
220 221 2.031870 TCGAGGACACTACCATCATGG 58.968 52.381 0.54 0.54 45.02 3.66
221 222 1.539065 CGAGGACACTACCATCATGGC 60.539 57.143 2.52 0.00 42.67 4.40
222 223 1.486310 GAGGACACTACCATCATGGCA 59.514 52.381 2.52 0.00 42.67 4.92
223 224 2.105477 GAGGACACTACCATCATGGCAT 59.895 50.000 2.52 0.00 42.67 4.40
224 225 2.105477 AGGACACTACCATCATGGCATC 59.895 50.000 2.52 0.00 42.67 3.91
225 226 2.158769 GGACACTACCATCATGGCATCA 60.159 50.000 2.52 0.00 42.67 3.07
226 227 2.874701 GACACTACCATCATGGCATCAC 59.125 50.000 2.52 0.00 42.67 3.06
227 228 2.224606 CACTACCATCATGGCATCACC 58.775 52.381 2.52 0.00 42.67 4.02
228 229 2.130193 ACTACCATCATGGCATCACCT 58.870 47.619 2.52 0.00 42.67 4.00
229 230 2.158711 ACTACCATCATGGCATCACCTG 60.159 50.000 2.52 0.00 42.67 4.00
230 231 0.921166 ACCATCATGGCATCACCTGA 59.079 50.000 2.52 0.00 42.67 3.86
231 232 1.497716 ACCATCATGGCATCACCTGAT 59.502 47.619 2.52 0.00 42.67 2.90
232 233 2.091499 ACCATCATGGCATCACCTGATT 60.091 45.455 2.52 0.00 42.67 2.57
233 234 2.963101 CCATCATGGCATCACCTGATTT 59.037 45.455 0.00 0.00 40.22 2.17
234 235 3.243737 CCATCATGGCATCACCTGATTTG 60.244 47.826 0.00 0.00 40.22 2.32
235 236 2.380941 TCATGGCATCACCTGATTTGG 58.619 47.619 0.00 0.00 40.22 3.28
236 237 1.117150 ATGGCATCACCTGATTTGGC 58.883 50.000 0.00 0.00 40.22 4.52
237 238 0.971959 TGGCATCACCTGATTTGGCC 60.972 55.000 0.00 0.00 39.93 5.36
238 239 0.685458 GGCATCACCTGATTTGGCCT 60.685 55.000 3.32 0.00 37.83 5.19
239 240 1.410083 GGCATCACCTGATTTGGCCTA 60.410 52.381 3.32 0.00 37.83 3.93
240 241 1.952296 GCATCACCTGATTTGGCCTAG 59.048 52.381 3.32 0.00 31.21 3.02
241 242 1.952296 CATCACCTGATTTGGCCTAGC 59.048 52.381 3.32 0.00 31.21 3.42
242 243 3.332623 CATCACCTGATTTGGCCTAGCC 61.333 54.545 3.32 0.00 40.15 3.93
243 244 5.834460 CATCACCTGATTTGGCCTAGCCA 62.834 52.174 3.32 3.67 44.66 4.75
258 259 5.789521 GCCTAGCCAAATTTTAGGTTTTCA 58.210 37.500 13.52 0.00 37.00 2.69
259 260 5.637810 GCCTAGCCAAATTTTAGGTTTTCAC 59.362 40.000 13.52 0.00 37.00 3.18
260 261 6.163476 CCTAGCCAAATTTTAGGTTTTCACC 58.837 40.000 6.34 0.00 44.67 4.02
261 262 4.968259 AGCCAAATTTTAGGTTTTCACCC 58.032 39.130 0.00 0.00 45.63 4.61
262 263 3.743911 GCCAAATTTTAGGTTTTCACCCG 59.256 43.478 0.00 0.00 45.63 5.28
263 264 4.311606 CCAAATTTTAGGTTTTCACCCGG 58.688 43.478 0.00 0.00 45.63 5.73
264 265 4.039366 CCAAATTTTAGGTTTTCACCCGGA 59.961 41.667 0.73 0.00 45.63 5.14
265 266 5.227152 CAAATTTTAGGTTTTCACCCGGAG 58.773 41.667 0.73 0.00 45.63 4.63
266 267 3.860968 TTTTAGGTTTTCACCCGGAGA 57.139 42.857 0.73 0.00 45.63 3.71
267 268 2.845363 TTAGGTTTTCACCCGGAGAC 57.155 50.000 0.73 0.00 45.63 3.36
268 269 0.978907 TAGGTTTTCACCCGGAGACC 59.021 55.000 0.73 0.00 45.63 3.85
269 270 1.057851 AGGTTTTCACCCGGAGACCA 61.058 55.000 0.73 0.00 45.63 4.02
270 271 0.887836 GGTTTTCACCCGGAGACCAC 60.888 60.000 0.73 0.00 37.03 4.16
271 272 0.179040 GTTTTCACCCGGAGACCACA 60.179 55.000 0.73 0.00 0.00 4.17
272 273 0.547075 TTTTCACCCGGAGACCACAA 59.453 50.000 0.73 0.00 0.00 3.33
273 274 0.107831 TTTCACCCGGAGACCACAAG 59.892 55.000 0.73 0.00 0.00 3.16
274 275 1.052124 TTCACCCGGAGACCACAAGT 61.052 55.000 0.73 0.00 0.00 3.16
275 276 1.301716 CACCCGGAGACCACAAGTG 60.302 63.158 0.73 0.00 0.00 3.16
276 277 1.458777 ACCCGGAGACCACAAGTGA 60.459 57.895 0.73 0.00 0.00 3.41
277 278 0.836400 ACCCGGAGACCACAAGTGAT 60.836 55.000 0.73 0.00 0.00 3.06
278 279 0.391661 CCCGGAGACCACAAGTGATG 60.392 60.000 0.73 0.00 0.00 3.07
279 280 0.391661 CCGGAGACCACAAGTGATGG 60.392 60.000 0.00 0.00 43.43 3.51
280 281 0.391661 CGGAGACCACAAGTGATGGG 60.392 60.000 0.94 0.00 41.97 4.00
287 288 2.465860 CACAAGTGATGGGGTACGAA 57.534 50.000 0.00 0.00 0.00 3.85
288 289 2.346803 CACAAGTGATGGGGTACGAAG 58.653 52.381 0.00 0.00 0.00 3.79
289 290 2.028476 CACAAGTGATGGGGTACGAAGA 60.028 50.000 0.00 0.00 0.00 2.87
290 291 2.838202 ACAAGTGATGGGGTACGAAGAT 59.162 45.455 0.00 0.00 0.00 2.40
291 292 3.118738 ACAAGTGATGGGGTACGAAGATC 60.119 47.826 0.00 0.00 0.00 2.75
292 293 2.747177 AGTGATGGGGTACGAAGATCA 58.253 47.619 0.00 0.00 0.00 2.92
293 294 3.104512 AGTGATGGGGTACGAAGATCAA 58.895 45.455 0.00 0.00 0.00 2.57
294 295 3.517901 AGTGATGGGGTACGAAGATCAAA 59.482 43.478 0.00 0.00 0.00 2.69
295 296 3.621715 GTGATGGGGTACGAAGATCAAAC 59.378 47.826 0.00 0.00 0.00 2.93
296 297 3.262151 TGATGGGGTACGAAGATCAAACA 59.738 43.478 0.00 0.00 0.00 2.83
297 298 3.773418 TGGGGTACGAAGATCAAACAA 57.227 42.857 0.00 0.00 0.00 2.83
298 299 3.670625 TGGGGTACGAAGATCAAACAAG 58.329 45.455 0.00 0.00 0.00 3.16
299 300 2.418976 GGGGTACGAAGATCAAACAAGC 59.581 50.000 0.00 0.00 0.00 4.01
300 301 3.335579 GGGTACGAAGATCAAACAAGCT 58.664 45.455 0.00 0.00 0.00 3.74
301 302 3.371285 GGGTACGAAGATCAAACAAGCTC 59.629 47.826 0.00 0.00 0.00 4.09
302 303 3.371285 GGTACGAAGATCAAACAAGCTCC 59.629 47.826 0.00 0.00 0.00 4.70
303 304 3.126001 ACGAAGATCAAACAAGCTCCA 57.874 42.857 0.00 0.00 0.00 3.86
304 305 2.808543 ACGAAGATCAAACAAGCTCCAC 59.191 45.455 0.00 0.00 0.00 4.02
305 306 2.159787 CGAAGATCAAACAAGCTCCACG 60.160 50.000 0.00 0.00 0.00 4.94
306 307 2.839486 AGATCAAACAAGCTCCACGA 57.161 45.000 0.00 0.00 0.00 4.35
307 308 2.417719 AGATCAAACAAGCTCCACGAC 58.582 47.619 0.00 0.00 0.00 4.34
308 309 1.126846 GATCAAACAAGCTCCACGACG 59.873 52.381 0.00 0.00 0.00 5.12
309 310 0.878523 TCAAACAAGCTCCACGACGG 60.879 55.000 0.00 0.00 0.00 4.79
310 311 1.145377 AAACAAGCTCCACGACGGT 59.855 52.632 0.00 0.00 35.57 4.83
311 312 0.390124 AAACAAGCTCCACGACGGTA 59.610 50.000 0.00 0.00 35.57 4.02
312 313 0.319297 AACAAGCTCCACGACGGTAC 60.319 55.000 0.00 0.00 35.57 3.34
313 314 1.445582 CAAGCTCCACGACGGTACC 60.446 63.158 0.16 0.16 35.57 3.34
314 315 1.605738 AAGCTCCACGACGGTACCT 60.606 57.895 10.90 0.00 35.57 3.08
315 316 1.183676 AAGCTCCACGACGGTACCTT 61.184 55.000 10.90 0.00 35.57 3.50
316 317 1.153881 GCTCCACGACGGTACCTTC 60.154 63.158 10.90 9.54 35.57 3.46
317 318 1.870055 GCTCCACGACGGTACCTTCA 61.870 60.000 17.76 0.00 35.57 3.02
318 319 0.599558 CTCCACGACGGTACCTTCAA 59.400 55.000 17.76 0.40 35.57 2.69
319 320 0.599558 TCCACGACGGTACCTTCAAG 59.400 55.000 17.76 9.18 35.57 3.02
320 321 0.389426 CCACGACGGTACCTTCAAGG 60.389 60.000 17.76 13.87 42.49 3.61
321 322 0.599558 CACGACGGTACCTTCAAGGA 59.400 55.000 11.59 0.00 37.67 3.36
322 323 0.886563 ACGACGGTACCTTCAAGGAG 59.113 55.000 11.59 4.25 37.67 3.69
323 324 0.172803 CGACGGTACCTTCAAGGAGG 59.827 60.000 11.59 0.00 37.67 4.30
324 325 1.553706 GACGGTACCTTCAAGGAGGA 58.446 55.000 11.59 0.00 37.67 3.71
325 326 1.897802 GACGGTACCTTCAAGGAGGAA 59.102 52.381 11.59 0.00 37.67 3.36
326 327 1.900486 ACGGTACCTTCAAGGAGGAAG 59.100 52.381 11.59 0.00 43.09 3.46
327 328 2.176889 CGGTACCTTCAAGGAGGAAGA 58.823 52.381 11.59 0.00 45.66 2.87
328 329 2.094130 CGGTACCTTCAAGGAGGAAGAC 60.094 54.545 11.59 0.00 45.66 3.01
329 330 2.904434 GGTACCTTCAAGGAGGAAGACA 59.096 50.000 11.59 0.00 45.66 3.41
330 331 3.326880 GGTACCTTCAAGGAGGAAGACAA 59.673 47.826 11.59 0.00 45.66 3.18
331 332 3.493767 ACCTTCAAGGAGGAAGACAAC 57.506 47.619 11.59 0.00 45.66 3.32
332 333 2.777692 ACCTTCAAGGAGGAAGACAACA 59.222 45.455 11.59 0.00 45.66 3.33
333 334 3.395941 ACCTTCAAGGAGGAAGACAACAT 59.604 43.478 11.59 0.00 45.66 2.71
334 335 4.006319 CCTTCAAGGAGGAAGACAACATC 58.994 47.826 0.00 0.00 45.66 3.06
335 336 3.703001 TCAAGGAGGAAGACAACATCC 57.297 47.619 0.00 0.00 38.32 3.51
336 337 2.305927 TCAAGGAGGAAGACAACATCCC 59.694 50.000 0.00 0.00 38.74 3.85
337 338 2.307098 CAAGGAGGAAGACAACATCCCT 59.693 50.000 0.00 0.00 38.74 4.20
338 339 3.491766 AGGAGGAAGACAACATCCCTA 57.508 47.619 0.00 0.00 38.74 3.53
339 340 3.379452 AGGAGGAAGACAACATCCCTAG 58.621 50.000 0.00 0.00 38.74 3.02
340 341 3.012959 AGGAGGAAGACAACATCCCTAGA 59.987 47.826 0.00 0.00 38.74 2.43
341 342 3.133183 GGAGGAAGACAACATCCCTAGAC 59.867 52.174 0.00 0.00 34.80 2.59
342 343 2.761208 AGGAAGACAACATCCCTAGACG 59.239 50.000 0.00 0.00 34.80 4.18
343 344 2.496470 GGAAGACAACATCCCTAGACGT 59.504 50.000 0.00 0.00 0.00 4.34
344 345 3.698040 GGAAGACAACATCCCTAGACGTA 59.302 47.826 0.00 0.00 0.00 3.57
345 346 4.202030 GGAAGACAACATCCCTAGACGTAG 60.202 50.000 0.00 0.00 0.00 3.51
346 347 8.725303 AGGAAGACAACATCCCTAGACGTAGT 62.725 46.154 0.00 0.00 37.88 2.73
358 359 3.780925 ACGTAGTTACTGTCGGCAC 57.219 52.632 13.75 0.00 37.78 5.01
359 360 1.242076 ACGTAGTTACTGTCGGCACT 58.758 50.000 13.75 0.00 37.78 4.40
360 361 1.068748 ACGTAGTTACTGTCGGCACTG 60.069 52.381 13.75 0.00 37.78 3.66
361 362 1.198408 CGTAGTTACTGTCGGCACTGA 59.802 52.381 0.00 0.00 0.00 3.41
362 363 2.593257 GTAGTTACTGTCGGCACTGAC 58.407 52.381 2.53 2.53 39.37 3.51
363 364 1.329256 AGTTACTGTCGGCACTGACT 58.671 50.000 10.77 0.00 39.64 3.41
364 365 2.511659 AGTTACTGTCGGCACTGACTA 58.488 47.619 10.77 0.00 39.64 2.59
365 366 2.488545 AGTTACTGTCGGCACTGACTAG 59.511 50.000 10.77 8.73 39.64 2.57
366 367 1.460504 TACTGTCGGCACTGACTAGG 58.539 55.000 10.77 4.31 39.64 3.02
367 368 0.539901 ACTGTCGGCACTGACTAGGT 60.540 55.000 10.77 4.85 39.64 3.08
368 369 0.171455 CTGTCGGCACTGACTAGGTC 59.829 60.000 10.77 0.00 39.64 3.85
369 370 0.538746 TGTCGGCACTGACTAGGTCA 60.539 55.000 10.77 0.43 40.50 4.02
370 371 0.601558 GTCGGCACTGACTAGGTCAA 59.398 55.000 2.27 0.00 42.26 3.18
371 372 1.204941 GTCGGCACTGACTAGGTCAAT 59.795 52.381 2.27 0.00 42.26 2.57
372 373 1.204704 TCGGCACTGACTAGGTCAATG 59.795 52.381 4.99 4.99 42.26 2.82
377 378 3.865446 CACTGACTAGGTCAATGCATGA 58.135 45.455 0.00 0.00 42.26 3.07
378 379 4.449131 CACTGACTAGGTCAATGCATGAT 58.551 43.478 0.00 0.00 42.26 2.45
379 380 4.880120 CACTGACTAGGTCAATGCATGATT 59.120 41.667 0.00 0.00 42.26 2.57
380 381 5.356190 CACTGACTAGGTCAATGCATGATTT 59.644 40.000 0.00 0.00 42.26 2.17
381 382 5.948162 ACTGACTAGGTCAATGCATGATTTT 59.052 36.000 0.00 0.00 42.26 1.82
382 383 6.435277 ACTGACTAGGTCAATGCATGATTTTT 59.565 34.615 0.00 0.00 42.26 1.94
383 384 7.611467 ACTGACTAGGTCAATGCATGATTTTTA 59.389 33.333 0.00 0.00 42.26 1.52
384 385 8.523915 TGACTAGGTCAATGCATGATTTTTAT 57.476 30.769 0.00 0.00 39.78 1.40
385 386 8.623903 TGACTAGGTCAATGCATGATTTTTATC 58.376 33.333 0.00 0.00 39.78 1.75
386 387 7.945134 ACTAGGTCAATGCATGATTTTTATCC 58.055 34.615 0.00 0.00 40.97 2.59
387 388 5.835257 AGGTCAATGCATGATTTTTATCCG 58.165 37.500 0.00 0.00 40.97 4.18
388 389 4.984161 GGTCAATGCATGATTTTTATCCGG 59.016 41.667 0.00 0.00 40.97 5.14
389 390 5.221224 GGTCAATGCATGATTTTTATCCGGA 60.221 40.000 6.61 6.61 40.97 5.14
390 391 5.916883 GTCAATGCATGATTTTTATCCGGAG 59.083 40.000 11.34 0.00 40.97 4.63
391 392 3.988379 TGCATGATTTTTATCCGGAGC 57.012 42.857 11.34 3.96 0.00 4.70
392 393 2.622942 TGCATGATTTTTATCCGGAGCC 59.377 45.455 11.34 0.00 0.00 4.70
393 394 2.350772 GCATGATTTTTATCCGGAGCCG 60.351 50.000 11.34 1.06 39.44 5.52
394 395 2.992124 TGATTTTTATCCGGAGCCGA 57.008 45.000 11.34 0.00 42.83 5.54
395 396 2.833794 TGATTTTTATCCGGAGCCGAG 58.166 47.619 11.34 0.73 42.83 4.63
396 397 2.169769 TGATTTTTATCCGGAGCCGAGT 59.830 45.455 11.34 0.00 42.83 4.18
397 398 2.304751 TTTTTATCCGGAGCCGAGTC 57.695 50.000 11.34 0.00 42.83 3.36
398 399 1.481871 TTTTATCCGGAGCCGAGTCT 58.518 50.000 11.34 0.00 42.83 3.24
399 400 1.481871 TTTATCCGGAGCCGAGTCTT 58.518 50.000 11.34 0.00 42.83 3.01
400 401 1.030457 TTATCCGGAGCCGAGTCTTC 58.970 55.000 11.34 0.00 42.83 2.87
401 402 0.822532 TATCCGGAGCCGAGTCTTCC 60.823 60.000 11.34 0.00 42.83 3.46
402 403 2.856039 ATCCGGAGCCGAGTCTTCCA 62.856 60.000 11.34 0.00 42.83 3.53
403 404 2.427245 CCGGAGCCGAGTCTTCCAT 61.427 63.158 11.05 0.00 42.83 3.41
404 405 1.066587 CGGAGCCGAGTCTTCCATC 59.933 63.158 2.00 0.00 42.83 3.51
405 406 1.066587 GGAGCCGAGTCTTCCATCG 59.933 63.158 0.00 0.00 38.65 3.84
411 412 2.196295 CGAGTCTTCCATCGGTCTTC 57.804 55.000 0.00 0.00 35.33 2.87
412 413 1.202313 CGAGTCTTCCATCGGTCTTCC 60.202 57.143 0.00 0.00 35.33 3.46
413 414 1.825474 GAGTCTTCCATCGGTCTTCCA 59.175 52.381 0.00 0.00 0.00 3.53
414 415 1.550976 AGTCTTCCATCGGTCTTCCAC 59.449 52.381 0.00 0.00 0.00 4.02
415 416 0.902531 TCTTCCATCGGTCTTCCACC 59.097 55.000 0.00 0.00 42.69 4.61
423 424 3.266240 GGTCTTCCACCAACCATCC 57.734 57.895 0.00 0.00 45.98 3.51
424 425 0.698818 GGTCTTCCACCAACCATCCT 59.301 55.000 0.00 0.00 45.98 3.24
430 431 0.106519 CCACCAACCATCCTGGATCC 60.107 60.000 6.13 4.20 40.96 3.36
451 452 3.901797 GACCTTCCAGTGCCACCGG 62.902 68.421 0.00 0.00 0.00 5.28
453 454 2.671070 CTTCCAGTGCCACCGGAT 59.329 61.111 9.46 0.00 0.00 4.18
506 508 2.523184 CTAGTCGTCGCCGCACTCAA 62.523 60.000 0.00 0.00 0.00 3.02
510 512 2.307309 CGTCGCCGCACTCAAGAAA 61.307 57.895 0.00 0.00 0.00 2.52
515 517 1.019278 GCCGCACTCAAGAAATCGGA 61.019 55.000 2.41 0.00 39.23 4.55
550 691 2.745037 GTTGGACCGCCCTACACA 59.255 61.111 0.00 0.00 39.91 3.72
551 692 1.670083 GTTGGACCGCCCTACACAC 60.670 63.158 0.00 0.00 39.91 3.82
565 722 1.227527 CACACGCCAAGACTGACCA 60.228 57.895 0.00 0.00 0.00 4.02
572 729 1.374758 CAAGACTGACCACCTCGCC 60.375 63.158 0.00 0.00 0.00 5.54
574 731 4.083862 GACTGACCACCTCGCCCC 62.084 72.222 0.00 0.00 0.00 5.80
598 755 1.675641 GCGCAAGGACAGGACCATT 60.676 57.895 0.30 0.00 38.28 3.16
630 787 1.276622 GGTCTGCCTGAAACCTCCTA 58.723 55.000 0.00 0.00 0.00 2.94
636 793 2.504175 TGCCTGAAACCTCCTATACACC 59.496 50.000 0.00 0.00 0.00 4.16
639 796 3.517901 CCTGAAACCTCCTATACACCACA 59.482 47.826 0.00 0.00 0.00 4.17
643 800 3.468071 ACCTCCTATACACCACAGACA 57.532 47.619 0.00 0.00 0.00 3.41
654 811 3.726517 ACAGACATTGTGCGGCGC 61.727 61.111 27.44 27.44 38.99 6.53
655 812 4.465512 CAGACATTGTGCGGCGCC 62.466 66.667 30.82 19.07 0.00 6.53
714 871 3.716195 CCCACCAGCATCCACCGA 61.716 66.667 0.00 0.00 0.00 4.69
715 872 2.436646 CCACCAGCATCCACCGAC 60.437 66.667 0.00 0.00 0.00 4.79
716 873 2.665000 CACCAGCATCCACCGACT 59.335 61.111 0.00 0.00 0.00 4.18
718 875 2.187946 CCAGCATCCACCGACTCC 59.812 66.667 0.00 0.00 0.00 3.85
719 876 2.659063 CCAGCATCCACCGACTCCA 61.659 63.158 0.00 0.00 0.00 3.86
721 878 2.125106 GCATCCACCGACTCCACC 60.125 66.667 0.00 0.00 0.00 4.61
723 880 3.771160 ATCCACCGACTCCACCGC 61.771 66.667 0.00 0.00 0.00 5.68
732 889 4.436998 CTCCACCGCCACCGACTC 62.437 72.222 0.00 0.00 36.29 3.36
767 925 2.104859 CACTGGCATCACGGAGCTG 61.105 63.158 0.00 0.00 0.00 4.24
799 957 4.265556 CACACTTCGGTTCTTATCATCGTC 59.734 45.833 0.00 0.00 0.00 4.20
818 976 6.713792 TCGTCGAGTCTATGAATCTAGATG 57.286 41.667 5.86 0.00 30.75 2.90
852 1010 1.860676 TCTGGTGTTCGTTGTACTGC 58.139 50.000 0.00 0.00 0.00 4.40
861 1019 1.737236 TCGTTGTACTGCCATGATTGC 59.263 47.619 0.00 0.00 0.00 3.56
871 1029 4.011966 TGCCATGATTGCAGAGGTATAG 57.988 45.455 0.00 0.00 34.05 1.31
877 1035 6.150641 CCATGATTGCAGAGGTATAGATTTGG 59.849 42.308 0.00 0.00 0.00 3.28
880 1038 5.957771 TTGCAGAGGTATAGATTTGGAGT 57.042 39.130 0.00 0.00 0.00 3.85
884 1042 7.175104 TGCAGAGGTATAGATTTGGAGTTTTT 58.825 34.615 0.00 0.00 0.00 1.94
925 1083 7.953493 AGATGGGTTTGTATTTTCTTTAAGGGA 59.047 33.333 0.00 0.00 0.00 4.20
926 1084 7.533289 TGGGTTTGTATTTTCTTTAAGGGAG 57.467 36.000 0.00 0.00 0.00 4.30
927 1085 7.299134 TGGGTTTGTATTTTCTTTAAGGGAGA 58.701 34.615 0.00 0.00 0.00 3.71
928 1086 7.953493 TGGGTTTGTATTTTCTTTAAGGGAGAT 59.047 33.333 0.00 0.00 0.00 2.75
929 1087 8.251026 GGGTTTGTATTTTCTTTAAGGGAGATG 58.749 37.037 0.00 0.00 0.00 2.90
931 1089 9.841880 GTTTGTATTTTCTTTAAGGGAGATGTC 57.158 33.333 0.00 0.00 0.00 3.06
932 1090 9.581289 TTTGTATTTTCTTTAAGGGAGATGTCA 57.419 29.630 0.00 0.00 0.00 3.58
933 1091 8.792830 TGTATTTTCTTTAAGGGAGATGTCAG 57.207 34.615 0.00 0.00 0.00 3.51
934 1092 8.383175 TGTATTTTCTTTAAGGGAGATGTCAGT 58.617 33.333 0.00 0.00 0.00 3.41
935 1093 9.232473 GTATTTTCTTTAAGGGAGATGTCAGTT 57.768 33.333 0.00 0.00 0.00 3.16
937 1095 8.617290 TTTTCTTTAAGGGAGATGTCAGTTAC 57.383 34.615 0.00 0.00 0.00 2.50
938 1096 7.554959 TTCTTTAAGGGAGATGTCAGTTACT 57.445 36.000 0.00 0.00 0.00 2.24
948 1106 7.254852 GGAGATGTCAGTTACTCAGTTCTTAG 58.745 42.308 0.00 0.00 0.00 2.18
953 1111 4.760715 TCAGTTACTCAGTTCTTAGTCGCT 59.239 41.667 0.00 0.00 0.00 4.93
1746 3256 1.819288 CCTGATGTCGTCACCTACACT 59.181 52.381 0.00 0.00 32.22 3.55
1782 3292 0.617413 ACTGTGCCAAGGAGGATCTG 59.383 55.000 0.00 0.00 41.22 2.90
1788 3298 1.589414 CCAAGGAGGATCTGAAGGGT 58.411 55.000 0.00 0.00 41.22 4.34
1815 3325 8.538856 GCACAGAAGCTATTCGATGATATAATC 58.461 37.037 0.00 0.00 40.58 1.75
1851 3361 3.056465 TGCCAGATGTTACGATGTACACA 60.056 43.478 0.00 0.00 0.00 3.72
1861 3371 2.231235 ACGATGTACACAGTGCTCATCA 59.769 45.455 25.18 10.76 33.55 3.07
1875 3385 1.138859 CTCATCAATGGGTACTGCCGA 59.861 52.381 0.00 0.00 38.44 5.54
2162 3672 4.526970 GTCCCACCAGATAACACAATCAT 58.473 43.478 0.00 0.00 0.00 2.45
2175 3685 8.920509 ATAACACAATCATGAACACATTGATG 57.079 30.769 11.90 8.97 32.73 3.07
2286 3796 2.295253 ACTCGCTTATTTCCGGACTG 57.705 50.000 1.83 0.00 0.00 3.51
2302 3812 1.541588 GACTGTGTGAAAATGGGGAGC 59.458 52.381 0.00 0.00 0.00 4.70
2304 3814 1.542915 CTGTGTGAAAATGGGGAGCTG 59.457 52.381 0.00 0.00 0.00 4.24
2596 4106 5.698545 GGTGATTCTTGGGAGATCTTTATCG 59.301 44.000 0.00 0.00 37.19 2.92
2720 4232 6.165577 CCCAAAACTGACCATTTTATTCTGG 58.834 40.000 0.00 0.00 38.55 3.86
2792 4314 9.838339 TCTGTAACTTCTCTGAAAAATTCTTCT 57.162 29.630 0.00 0.00 0.00 2.85
2801 4323 9.838339 TCTCTGAAAAATTCTTCTACTGAAACT 57.162 29.630 0.00 0.00 0.00 2.66
2970 4493 1.623811 GTGAGTTACAGGAGGCTTGGA 59.376 52.381 0.00 0.00 0.00 3.53
2983 4506 3.499338 AGGCTTGGATCATGTGAAAACA 58.501 40.909 0.00 0.00 0.00 2.83
2986 4509 4.232221 GCTTGGATCATGTGAAAACAGTG 58.768 43.478 0.00 0.00 0.00 3.66
2987 4510 4.022935 GCTTGGATCATGTGAAAACAGTGA 60.023 41.667 0.00 0.00 0.00 3.41
2994 4525 4.338964 TCATGTGAAAACAGTGAGTTGCAT 59.661 37.500 0.00 0.00 41.19 3.96
3100 4631 2.033424 GGTGTTCTTGGTTGCTGAACTC 59.967 50.000 0.00 0.00 40.27 3.01
3110 4649 1.619654 TGCTGAACTCAAACCCCATG 58.380 50.000 0.00 0.00 0.00 3.66
3142 4681 3.648339 TTCAGTTCTCATTTGCCTTGC 57.352 42.857 0.00 0.00 0.00 4.01
3174 4713 2.026822 GCAACTCAGATCTTCCTGGGAA 60.027 50.000 0.00 1.90 36.78 3.97
3195 4734 6.072175 GGGAACATTGTATTTCTGCAGTGTAA 60.072 38.462 14.67 7.33 37.03 2.41
3198 4737 9.410556 GAACATTGTATTTCTGCAGTGTAAAAT 57.589 29.630 14.67 14.06 37.03 1.82
3323 4862 2.746359 GAGACTGCTGGGCTGTGT 59.254 61.111 6.77 3.11 40.59 3.72
3468 5010 8.409358 AATATATGTGATAAAAAGGACCCTGC 57.591 34.615 0.00 0.00 0.00 4.85
3488 5030 4.948847 TGCTGATCAGAAGCACGTATATT 58.051 39.130 27.04 0.00 45.50 1.28
3500 5042 4.283467 AGCACGTATATTATTCTGCTCCCA 59.717 41.667 0.00 0.00 28.77 4.37
3586 5128 1.134401 TCCCGCAGATTCATCTCAACC 60.134 52.381 0.00 0.00 34.22 3.77
3633 5205 8.754991 TCTTTGTTCCCTATTTGTAACTGAAA 57.245 30.769 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.909708 TTTGATCAATAAATTTGACGGATGTC 57.090 30.769 9.40 0.00 45.71 3.06
1 2 9.357652 CTTTTGATCAATAAATTTGACGGATGT 57.642 29.630 9.40 0.00 0.00 3.06
2 3 9.571810 TCTTTTGATCAATAAATTTGACGGATG 57.428 29.630 9.40 0.00 0.00 3.51
4 5 9.624697 CTTCTTTTGATCAATAAATTTGACGGA 57.375 29.630 9.40 0.00 0.00 4.69
5 6 8.375465 GCTTCTTTTGATCAATAAATTTGACGG 58.625 33.333 9.40 0.00 0.00 4.79
6 7 8.914654 TGCTTCTTTTGATCAATAAATTTGACG 58.085 29.630 9.40 0.00 0.00 4.35
19 20 9.508567 GGTGTTTCTATAATGCTTCTTTTGATC 57.491 33.333 0.00 0.00 0.00 2.92
20 21 9.247861 AGGTGTTTCTATAATGCTTCTTTTGAT 57.752 29.630 0.00 0.00 0.00 2.57
21 22 8.635765 AGGTGTTTCTATAATGCTTCTTTTGA 57.364 30.769 0.00 0.00 0.00 2.69
22 23 9.346725 GAAGGTGTTTCTATAATGCTTCTTTTG 57.653 33.333 0.00 0.00 32.83 2.44
23 24 9.077885 TGAAGGTGTTTCTATAATGCTTCTTTT 57.922 29.630 0.00 0.00 36.71 2.27
24 25 8.635765 TGAAGGTGTTTCTATAATGCTTCTTT 57.364 30.769 0.00 0.00 36.71 2.52
25 26 8.635765 TTGAAGGTGTTTCTATAATGCTTCTT 57.364 30.769 0.00 0.00 36.71 2.52
26 27 7.337942 CCTTGAAGGTGTTTCTATAATGCTTCT 59.662 37.037 2.25 0.00 36.71 2.85
27 28 7.336931 TCCTTGAAGGTGTTTCTATAATGCTTC 59.663 37.037 11.60 0.00 36.53 3.86
28 29 7.175104 TCCTTGAAGGTGTTTCTATAATGCTT 58.825 34.615 11.60 0.00 36.53 3.91
29 30 6.721318 TCCTTGAAGGTGTTTCTATAATGCT 58.279 36.000 11.60 0.00 36.53 3.79
30 31 7.336931 TCTTCCTTGAAGGTGTTTCTATAATGC 59.663 37.037 11.60 0.00 39.82 3.56
31 32 8.792830 TCTTCCTTGAAGGTGTTTCTATAATG 57.207 34.615 11.60 0.00 39.82 1.90
32 33 9.807921 TTTCTTCCTTGAAGGTGTTTCTATAAT 57.192 29.630 11.60 0.00 39.82 1.28
33 34 9.284968 CTTTCTTCCTTGAAGGTGTTTCTATAA 57.715 33.333 11.60 0.00 39.82 0.98
34 35 7.390718 GCTTTCTTCCTTGAAGGTGTTTCTATA 59.609 37.037 11.60 0.00 39.82 1.31
35 36 6.207614 GCTTTCTTCCTTGAAGGTGTTTCTAT 59.792 38.462 11.60 0.00 39.82 1.98
36 37 5.531287 GCTTTCTTCCTTGAAGGTGTTTCTA 59.469 40.000 11.60 0.00 39.82 2.10
37 38 4.339530 GCTTTCTTCCTTGAAGGTGTTTCT 59.660 41.667 11.60 0.00 39.82 2.52
38 39 4.097892 TGCTTTCTTCCTTGAAGGTGTTTC 59.902 41.667 11.60 0.00 39.82 2.78
39 40 4.023291 TGCTTTCTTCCTTGAAGGTGTTT 58.977 39.130 11.60 0.00 39.82 2.83
40 41 3.631250 TGCTTTCTTCCTTGAAGGTGTT 58.369 40.909 11.60 0.00 39.82 3.32
41 42 3.297134 TGCTTTCTTCCTTGAAGGTGT 57.703 42.857 11.60 0.00 39.82 4.16
42 43 4.142513 GCTATGCTTTCTTCCTTGAAGGTG 60.143 45.833 11.60 5.93 39.82 4.00
43 44 4.013050 GCTATGCTTTCTTCCTTGAAGGT 58.987 43.478 11.60 0.00 39.82 3.50
44 45 4.012374 TGCTATGCTTTCTTCCTTGAAGG 58.988 43.478 4.45 4.45 39.82 3.46
45 46 5.633830 TTGCTATGCTTTCTTCCTTGAAG 57.366 39.130 0.00 0.00 40.65 3.02
46 47 6.403866 TTTTGCTATGCTTTCTTCCTTGAA 57.596 33.333 0.00 0.00 0.00 2.69
47 48 6.403866 TTTTTGCTATGCTTTCTTCCTTGA 57.596 33.333 0.00 0.00 0.00 3.02
48 49 5.636543 CCTTTTTGCTATGCTTTCTTCCTTG 59.363 40.000 0.00 0.00 0.00 3.61
49 50 5.787380 CCTTTTTGCTATGCTTTCTTCCTT 58.213 37.500 0.00 0.00 0.00 3.36
50 51 4.322273 GCCTTTTTGCTATGCTTTCTTCCT 60.322 41.667 0.00 0.00 0.00 3.36
51 52 3.928992 GCCTTTTTGCTATGCTTTCTTCC 59.071 43.478 0.00 0.00 0.00 3.46
52 53 4.814147 AGCCTTTTTGCTATGCTTTCTTC 58.186 39.130 0.00 0.00 40.56 2.87
53 54 4.879197 AGCCTTTTTGCTATGCTTTCTT 57.121 36.364 0.00 0.00 40.56 2.52
54 55 5.982890 TTAGCCTTTTTGCTATGCTTTCT 57.017 34.783 0.00 0.00 43.04 2.52
55 56 5.006068 GCATTAGCCTTTTTGCTATGCTTTC 59.994 40.000 14.49 0.00 43.04 2.62
56 57 4.872124 GCATTAGCCTTTTTGCTATGCTTT 59.128 37.500 14.49 0.00 43.04 3.51
57 58 4.081531 TGCATTAGCCTTTTTGCTATGCTT 60.082 37.500 18.77 0.00 43.04 3.91
58 59 3.448301 TGCATTAGCCTTTTTGCTATGCT 59.552 39.130 18.77 0.00 43.04 3.79
59 60 3.784338 TGCATTAGCCTTTTTGCTATGC 58.216 40.909 14.71 14.71 43.04 3.14
60 61 6.724694 TTTTGCATTAGCCTTTTTGCTATG 57.275 33.333 0.00 0.00 43.04 2.23
61 62 7.160726 TCTTTTTGCATTAGCCTTTTTGCTAT 58.839 30.769 0.00 0.00 43.04 2.97
62 63 6.520272 TCTTTTTGCATTAGCCTTTTTGCTA 58.480 32.000 0.00 0.00 42.75 3.49
63 64 5.367302 TCTTTTTGCATTAGCCTTTTTGCT 58.633 33.333 0.00 0.00 45.38 3.91
64 65 5.671742 TCTTTTTGCATTAGCCTTTTTGC 57.328 34.783 0.00 0.00 41.13 3.68
65 66 8.397148 TCTTTTCTTTTTGCATTAGCCTTTTTG 58.603 29.630 0.00 0.00 41.13 2.44
66 67 8.504812 TCTTTTCTTTTTGCATTAGCCTTTTT 57.495 26.923 0.00 0.00 41.13 1.94
67 68 8.504812 TTCTTTTCTTTTTGCATTAGCCTTTT 57.495 26.923 0.00 0.00 41.13 2.27
68 69 8.504812 TTTCTTTTCTTTTTGCATTAGCCTTT 57.495 26.923 0.00 0.00 41.13 3.11
69 70 8.504812 TTTTCTTTTCTTTTTGCATTAGCCTT 57.495 26.923 0.00 0.00 41.13 4.35
70 71 8.504812 TTTTTCTTTTCTTTTTGCATTAGCCT 57.495 26.923 0.00 0.00 41.13 4.58
93 94 1.133730 TGGTGCCCGTTACTCCTTTTT 60.134 47.619 0.00 0.00 0.00 1.94
94 95 0.475044 TGGTGCCCGTTACTCCTTTT 59.525 50.000 0.00 0.00 0.00 2.27
95 96 0.250597 GTGGTGCCCGTTACTCCTTT 60.251 55.000 0.00 0.00 0.00 3.11
96 97 1.373812 GTGGTGCCCGTTACTCCTT 59.626 57.895 0.00 0.00 0.00 3.36
97 98 2.590114 GGTGGTGCCCGTTACTCCT 61.590 63.158 0.00 0.00 0.00 3.69
98 99 2.046604 GGTGGTGCCCGTTACTCC 60.047 66.667 0.00 0.00 0.00 3.85
99 100 1.670083 GTGGTGGTGCCCGTTACTC 60.670 63.158 0.00 0.00 36.04 2.59
100 101 2.391724 CTGTGGTGGTGCCCGTTACT 62.392 60.000 0.00 0.00 36.04 2.24
101 102 1.964373 CTGTGGTGGTGCCCGTTAC 60.964 63.158 0.00 0.00 36.04 2.50
102 103 1.485294 ATCTGTGGTGGTGCCCGTTA 61.485 55.000 0.00 0.00 36.04 3.18
103 104 2.748058 GATCTGTGGTGGTGCCCGTT 62.748 60.000 0.00 0.00 36.04 4.44
104 105 3.249189 ATCTGTGGTGGTGCCCGT 61.249 61.111 0.00 0.00 36.04 5.28
105 106 2.436646 GATCTGTGGTGGTGCCCG 60.437 66.667 0.00 0.00 36.04 6.13
106 107 2.044946 GGATCTGTGGTGGTGCCC 60.045 66.667 0.00 0.00 36.04 5.36
107 108 0.539438 TTTGGATCTGTGGTGGTGCC 60.539 55.000 0.00 0.00 37.90 5.01
108 109 0.598065 GTTTGGATCTGTGGTGGTGC 59.402 55.000 0.00 0.00 0.00 5.01
109 110 1.608590 GTGTTTGGATCTGTGGTGGTG 59.391 52.381 0.00 0.00 0.00 4.17
110 111 1.478654 GGTGTTTGGATCTGTGGTGGT 60.479 52.381 0.00 0.00 0.00 4.16
111 112 1.247567 GGTGTTTGGATCTGTGGTGG 58.752 55.000 0.00 0.00 0.00 4.61
112 113 1.608590 GTGGTGTTTGGATCTGTGGTG 59.391 52.381 0.00 0.00 0.00 4.17
113 114 1.478654 GGTGGTGTTTGGATCTGTGGT 60.479 52.381 0.00 0.00 0.00 4.16
114 115 1.247567 GGTGGTGTTTGGATCTGTGG 58.752 55.000 0.00 0.00 0.00 4.17
115 116 1.979855 TGGTGGTGTTTGGATCTGTG 58.020 50.000 0.00 0.00 0.00 3.66
116 117 2.306847 GTTGGTGGTGTTTGGATCTGT 58.693 47.619 0.00 0.00 0.00 3.41
117 118 2.305928 TGTTGGTGGTGTTTGGATCTG 58.694 47.619 0.00 0.00 0.00 2.90
118 119 2.746279 TGTTGGTGGTGTTTGGATCT 57.254 45.000 0.00 0.00 0.00 2.75
119 120 2.545742 GCTTGTTGGTGGTGTTTGGATC 60.546 50.000 0.00 0.00 0.00 3.36
120 121 1.412343 GCTTGTTGGTGGTGTTTGGAT 59.588 47.619 0.00 0.00 0.00 3.41
121 122 0.820871 GCTTGTTGGTGGTGTTTGGA 59.179 50.000 0.00 0.00 0.00 3.53
122 123 0.179086 GGCTTGTTGGTGGTGTTTGG 60.179 55.000 0.00 0.00 0.00 3.28
123 124 0.179086 GGGCTTGTTGGTGGTGTTTG 60.179 55.000 0.00 0.00 0.00 2.93
124 125 0.325203 AGGGCTTGTTGGTGGTGTTT 60.325 50.000 0.00 0.00 0.00 2.83
125 126 0.755327 GAGGGCTTGTTGGTGGTGTT 60.755 55.000 0.00 0.00 0.00 3.32
126 127 1.152756 GAGGGCTTGTTGGTGGTGT 60.153 57.895 0.00 0.00 0.00 4.16
127 128 1.903404 GGAGGGCTTGTTGGTGGTG 60.903 63.158 0.00 0.00 0.00 4.17
128 129 2.391130 TGGAGGGCTTGTTGGTGGT 61.391 57.895 0.00 0.00 0.00 4.16
129 130 1.903404 GTGGAGGGCTTGTTGGTGG 60.903 63.158 0.00 0.00 0.00 4.61
130 131 1.152777 TGTGGAGGGCTTGTTGGTG 60.153 57.895 0.00 0.00 0.00 4.17
131 132 1.152756 GTGTGGAGGGCTTGTTGGT 60.153 57.895 0.00 0.00 0.00 3.67
132 133 1.903404 GGTGTGGAGGGCTTGTTGG 60.903 63.158 0.00 0.00 0.00 3.77
133 134 1.152777 TGGTGTGGAGGGCTTGTTG 60.153 57.895 0.00 0.00 0.00 3.33
134 135 1.152756 GTGGTGTGGAGGGCTTGTT 60.153 57.895 0.00 0.00 0.00 2.83
135 136 2.515901 GTGGTGTGGAGGGCTTGT 59.484 61.111 0.00 0.00 0.00 3.16
136 137 2.669569 CGTGGTGTGGAGGGCTTG 60.670 66.667 0.00 0.00 0.00 4.01
137 138 3.953775 CCGTGGTGTGGAGGGCTT 61.954 66.667 0.00 0.00 0.00 4.35
141 142 1.004200 GTTACCCGTGGTGTGGAGG 60.004 63.158 5.90 0.00 36.19 4.30
142 143 1.259609 TAGTTACCCGTGGTGTGGAG 58.740 55.000 5.90 0.00 36.19 3.86
143 144 1.826720 GATAGTTACCCGTGGTGTGGA 59.173 52.381 5.90 0.00 36.19 4.02
144 145 1.470285 CGATAGTTACCCGTGGTGTGG 60.470 57.143 5.90 0.00 36.19 4.17
145 146 1.917273 CGATAGTTACCCGTGGTGTG 58.083 55.000 5.90 0.00 36.19 3.82
159 160 0.669077 CCTTGGAGACCCGACGATAG 59.331 60.000 0.00 0.00 37.43 2.08
160 161 0.033796 ACCTTGGAGACCCGACGATA 60.034 55.000 0.00 0.00 34.29 2.92
161 162 1.305046 ACCTTGGAGACCCGACGAT 60.305 57.895 0.00 0.00 34.29 3.73
162 163 2.116772 ACCTTGGAGACCCGACGA 59.883 61.111 0.00 0.00 34.29 4.20
163 164 2.261671 CACCTTGGAGACCCGACG 59.738 66.667 0.00 0.00 34.29 5.12
164 165 1.292541 GTCACCTTGGAGACCCGAC 59.707 63.158 6.04 0.00 34.29 4.79
165 166 2.273179 CGTCACCTTGGAGACCCGA 61.273 63.158 10.73 0.00 34.29 5.14
166 167 2.261671 CGTCACCTTGGAGACCCG 59.738 66.667 10.73 0.00 34.29 5.28
167 168 2.047179 GCGTCACCTTGGAGACCC 60.047 66.667 10.73 0.00 0.00 4.46
168 169 2.047179 GGCGTCACCTTGGAGACC 60.047 66.667 10.73 4.96 34.51 3.85
177 178 2.450609 TACTTCTTGAAGGCGTCACC 57.549 50.000 13.97 0.00 35.39 4.02
178 179 3.746492 ACATTACTTCTTGAAGGCGTCAC 59.254 43.478 13.97 0.00 35.39 3.67
179 180 3.994392 GACATTACTTCTTGAAGGCGTCA 59.006 43.478 13.97 0.00 0.00 4.35
180 181 3.060895 CGACATTACTTCTTGAAGGCGTC 59.939 47.826 13.97 12.04 0.00 5.19
181 182 2.993899 CGACATTACTTCTTGAAGGCGT 59.006 45.455 13.97 5.85 0.00 5.68
182 183 3.250744 TCGACATTACTTCTTGAAGGCG 58.749 45.455 13.97 2.50 0.00 5.52
183 184 3.619038 CCTCGACATTACTTCTTGAAGGC 59.381 47.826 13.97 0.00 0.00 4.35
184 185 4.865365 GTCCTCGACATTACTTCTTGAAGG 59.135 45.833 13.97 0.23 32.09 3.46
185 186 5.346281 GTGTCCTCGACATTACTTCTTGAAG 59.654 44.000 8.65 8.65 44.63 3.02
186 187 5.010719 AGTGTCCTCGACATTACTTCTTGAA 59.989 40.000 0.00 0.00 44.63 2.69
187 188 4.523173 AGTGTCCTCGACATTACTTCTTGA 59.477 41.667 0.00 0.00 44.63 3.02
188 189 4.810790 AGTGTCCTCGACATTACTTCTTG 58.189 43.478 0.00 0.00 44.63 3.02
189 190 5.952033 GTAGTGTCCTCGACATTACTTCTT 58.048 41.667 16.00 0.00 45.67 2.52
190 191 5.564048 GTAGTGTCCTCGACATTACTTCT 57.436 43.478 16.00 3.80 45.67 2.85
195 196 4.274978 TGATGGTAGTGTCCTCGACATTA 58.725 43.478 0.00 0.00 44.63 1.90
196 197 3.096852 TGATGGTAGTGTCCTCGACATT 58.903 45.455 0.00 0.00 44.63 2.71
197 198 2.735151 TGATGGTAGTGTCCTCGACAT 58.265 47.619 0.00 0.00 44.63 3.06
198 199 2.209690 TGATGGTAGTGTCCTCGACA 57.790 50.000 0.00 0.00 40.50 4.35
199 200 2.223829 CCATGATGGTAGTGTCCTCGAC 60.224 54.545 2.54 0.00 31.35 4.20
200 201 2.031870 CCATGATGGTAGTGTCCTCGA 58.968 52.381 2.54 0.00 31.35 4.04
201 202 1.539065 GCCATGATGGTAGTGTCCTCG 60.539 57.143 13.84 0.00 40.46 4.63
202 203 1.486310 TGCCATGATGGTAGTGTCCTC 59.514 52.381 13.84 0.00 40.46 3.71
203 204 1.583556 TGCCATGATGGTAGTGTCCT 58.416 50.000 13.84 0.00 40.46 3.85
204 205 2.158769 TGATGCCATGATGGTAGTGTCC 60.159 50.000 13.84 0.00 40.46 4.02
205 206 2.874701 GTGATGCCATGATGGTAGTGTC 59.125 50.000 13.84 4.06 40.46 3.67
206 207 2.421952 GGTGATGCCATGATGGTAGTGT 60.422 50.000 13.84 0.00 40.46 3.55
207 208 2.158711 AGGTGATGCCATGATGGTAGTG 60.159 50.000 13.84 0.00 40.46 2.74
208 209 2.130193 AGGTGATGCCATGATGGTAGT 58.870 47.619 13.84 0.00 40.46 2.73
209 210 2.105306 TCAGGTGATGCCATGATGGTAG 59.895 50.000 13.84 0.00 40.46 3.18
210 211 2.126057 TCAGGTGATGCCATGATGGTA 58.874 47.619 13.84 9.35 40.46 3.25
211 212 0.921166 TCAGGTGATGCCATGATGGT 59.079 50.000 13.84 0.00 40.46 3.55
212 213 2.287977 ATCAGGTGATGCCATGATGG 57.712 50.000 7.21 7.21 41.55 3.51
213 214 3.243737 CCAAATCAGGTGATGCCATGATG 60.244 47.826 0.00 0.00 40.61 3.07
214 215 2.963101 CCAAATCAGGTGATGCCATGAT 59.037 45.455 0.00 0.00 40.61 2.45
215 216 2.380941 CCAAATCAGGTGATGCCATGA 58.619 47.619 0.00 0.00 40.61 3.07
216 217 1.202486 GCCAAATCAGGTGATGCCATG 60.202 52.381 0.00 0.00 40.61 3.66
217 218 1.117150 GCCAAATCAGGTGATGCCAT 58.883 50.000 0.00 0.00 40.61 4.40
218 219 0.971959 GGCCAAATCAGGTGATGCCA 60.972 55.000 12.66 0.00 39.54 4.92
219 220 0.685458 AGGCCAAATCAGGTGATGCC 60.685 55.000 5.01 10.46 39.85 4.40
220 221 1.952296 CTAGGCCAAATCAGGTGATGC 59.048 52.381 5.01 0.00 34.49 3.91
221 222 1.952296 GCTAGGCCAAATCAGGTGATG 59.048 52.381 5.01 0.00 34.49 3.07
222 223 2.355010 GCTAGGCCAAATCAGGTGAT 57.645 50.000 5.01 0.00 36.07 3.06
223 224 3.882131 GCTAGGCCAAATCAGGTGA 57.118 52.632 5.01 0.00 0.00 4.02
235 236 5.637810 GTGAAAACCTAAAATTTGGCTAGGC 59.362 40.000 9.85 9.85 36.44 3.93
236 237 6.163476 GGTGAAAACCTAAAATTTGGCTAGG 58.837 40.000 11.37 11.37 38.56 3.02
237 238 6.163476 GGGTGAAAACCTAAAATTTGGCTAG 58.837 40.000 0.00 0.00 0.00 3.42
238 239 5.279056 CGGGTGAAAACCTAAAATTTGGCTA 60.279 40.000 0.00 0.00 0.00 3.93
239 240 4.502431 CGGGTGAAAACCTAAAATTTGGCT 60.502 41.667 0.00 0.00 0.00 4.75
240 241 3.743911 CGGGTGAAAACCTAAAATTTGGC 59.256 43.478 0.00 0.00 0.00 4.52
241 242 4.039366 TCCGGGTGAAAACCTAAAATTTGG 59.961 41.667 0.00 0.00 0.00 3.28
242 243 5.010213 TCTCCGGGTGAAAACCTAAAATTTG 59.990 40.000 0.00 0.00 0.00 2.32
243 244 5.010314 GTCTCCGGGTGAAAACCTAAAATTT 59.990 40.000 0.00 0.00 0.00 1.82
244 245 4.521639 GTCTCCGGGTGAAAACCTAAAATT 59.478 41.667 0.00 0.00 0.00 1.82
245 246 4.077108 GTCTCCGGGTGAAAACCTAAAAT 58.923 43.478 0.00 0.00 0.00 1.82
246 247 3.479489 GTCTCCGGGTGAAAACCTAAAA 58.521 45.455 0.00 0.00 0.00 1.52
247 248 2.224597 GGTCTCCGGGTGAAAACCTAAA 60.225 50.000 0.00 0.00 0.00 1.85
248 249 1.348696 GGTCTCCGGGTGAAAACCTAA 59.651 52.381 0.00 0.00 0.00 2.69
249 250 0.978907 GGTCTCCGGGTGAAAACCTA 59.021 55.000 0.00 0.00 0.00 3.08
250 251 1.057851 TGGTCTCCGGGTGAAAACCT 61.058 55.000 0.00 0.00 0.00 3.50
251 252 0.887836 GTGGTCTCCGGGTGAAAACC 60.888 60.000 0.00 1.18 0.00 3.27
252 253 0.179040 TGTGGTCTCCGGGTGAAAAC 60.179 55.000 0.00 3.34 0.00 2.43
253 254 0.547075 TTGTGGTCTCCGGGTGAAAA 59.453 50.000 0.00 0.00 0.00 2.29
254 255 0.107831 CTTGTGGTCTCCGGGTGAAA 59.892 55.000 0.00 0.00 0.00 2.69
255 256 1.052124 ACTTGTGGTCTCCGGGTGAA 61.052 55.000 0.00 0.00 0.00 3.18
256 257 1.458777 ACTTGTGGTCTCCGGGTGA 60.459 57.895 0.00 0.00 0.00 4.02
257 258 1.301716 CACTTGTGGTCTCCGGGTG 60.302 63.158 0.00 0.00 0.00 4.61
258 259 0.836400 ATCACTTGTGGTCTCCGGGT 60.836 55.000 0.00 0.00 0.00 5.28
259 260 0.391661 CATCACTTGTGGTCTCCGGG 60.392 60.000 0.00 0.00 0.00 5.73
260 261 0.391661 CCATCACTTGTGGTCTCCGG 60.392 60.000 0.00 0.00 31.96 5.14
261 262 0.391661 CCCATCACTTGTGGTCTCCG 60.392 60.000 0.64 0.00 34.87 4.63
262 263 0.035056 CCCCATCACTTGTGGTCTCC 60.035 60.000 0.64 0.00 34.87 3.71
263 264 0.693049 ACCCCATCACTTGTGGTCTC 59.307 55.000 0.64 0.00 34.87 3.36
264 265 1.628846 GTACCCCATCACTTGTGGTCT 59.371 52.381 0.64 0.00 34.87 3.85
265 266 1.674817 CGTACCCCATCACTTGTGGTC 60.675 57.143 0.64 0.00 34.87 4.02
266 267 0.323629 CGTACCCCATCACTTGTGGT 59.676 55.000 0.64 0.00 34.87 4.16
267 268 0.611200 TCGTACCCCATCACTTGTGG 59.389 55.000 0.64 0.00 36.47 4.17
268 269 2.028476 TCTTCGTACCCCATCACTTGTG 60.028 50.000 0.00 0.00 0.00 3.33
269 270 2.253610 TCTTCGTACCCCATCACTTGT 58.746 47.619 0.00 0.00 0.00 3.16
270 271 3.118775 TGATCTTCGTACCCCATCACTTG 60.119 47.826 0.00 0.00 0.00 3.16
271 272 3.104512 TGATCTTCGTACCCCATCACTT 58.895 45.455 0.00 0.00 0.00 3.16
272 273 2.747177 TGATCTTCGTACCCCATCACT 58.253 47.619 0.00 0.00 0.00 3.41
273 274 3.536956 TTGATCTTCGTACCCCATCAC 57.463 47.619 0.00 0.00 0.00 3.06
274 275 3.262151 TGTTTGATCTTCGTACCCCATCA 59.738 43.478 0.00 0.00 0.00 3.07
275 276 3.869065 TGTTTGATCTTCGTACCCCATC 58.131 45.455 0.00 0.00 0.00 3.51
276 277 3.992943 TGTTTGATCTTCGTACCCCAT 57.007 42.857 0.00 0.00 0.00 4.00
277 278 3.670625 CTTGTTTGATCTTCGTACCCCA 58.329 45.455 0.00 0.00 0.00 4.96
278 279 2.418976 GCTTGTTTGATCTTCGTACCCC 59.581 50.000 0.00 0.00 0.00 4.95
279 280 3.335579 AGCTTGTTTGATCTTCGTACCC 58.664 45.455 0.00 0.00 0.00 3.69
280 281 3.371285 GGAGCTTGTTTGATCTTCGTACC 59.629 47.826 0.00 0.00 0.00 3.34
281 282 3.994392 TGGAGCTTGTTTGATCTTCGTAC 59.006 43.478 0.00 0.00 0.00 3.67
282 283 3.994392 GTGGAGCTTGTTTGATCTTCGTA 59.006 43.478 0.00 0.00 0.00 3.43
283 284 2.808543 GTGGAGCTTGTTTGATCTTCGT 59.191 45.455 0.00 0.00 0.00 3.85
284 285 2.159787 CGTGGAGCTTGTTTGATCTTCG 60.160 50.000 0.00 0.00 0.00 3.79
285 286 3.067106 TCGTGGAGCTTGTTTGATCTTC 58.933 45.455 0.00 0.00 0.00 2.87
286 287 2.808543 GTCGTGGAGCTTGTTTGATCTT 59.191 45.455 0.00 0.00 0.00 2.40
287 288 2.417719 GTCGTGGAGCTTGTTTGATCT 58.582 47.619 0.00 0.00 0.00 2.75
288 289 1.126846 CGTCGTGGAGCTTGTTTGATC 59.873 52.381 0.00 0.00 0.00 2.92
289 290 1.148310 CGTCGTGGAGCTTGTTTGAT 58.852 50.000 0.00 0.00 0.00 2.57
290 291 0.878523 CCGTCGTGGAGCTTGTTTGA 60.879 55.000 0.00 0.00 42.00 2.69
291 292 1.157870 ACCGTCGTGGAGCTTGTTTG 61.158 55.000 3.47 0.00 42.00 2.93
292 293 0.390124 TACCGTCGTGGAGCTTGTTT 59.610 50.000 3.47 0.00 42.00 2.83
293 294 0.319297 GTACCGTCGTGGAGCTTGTT 60.319 55.000 3.47 0.00 42.00 2.83
294 295 1.288127 GTACCGTCGTGGAGCTTGT 59.712 57.895 3.47 0.00 42.00 3.16
295 296 1.445582 GGTACCGTCGTGGAGCTTG 60.446 63.158 0.00 0.00 42.00 4.01
296 297 1.183676 AAGGTACCGTCGTGGAGCTT 61.184 55.000 6.18 5.02 42.00 3.74
297 298 1.593296 GAAGGTACCGTCGTGGAGCT 61.593 60.000 12.25 0.00 42.00 4.09
298 299 1.153881 GAAGGTACCGTCGTGGAGC 60.154 63.158 12.25 0.00 42.00 4.70
299 300 0.599558 TTGAAGGTACCGTCGTGGAG 59.400 55.000 20.85 0.00 42.00 3.86
300 301 0.599558 CTTGAAGGTACCGTCGTGGA 59.400 55.000 20.85 2.67 42.00 4.02
301 302 0.389426 CCTTGAAGGTACCGTCGTGG 60.389 60.000 20.85 19.72 46.41 4.94
302 303 0.599558 TCCTTGAAGGTACCGTCGTG 59.400 55.000 20.85 15.55 36.53 4.35
303 304 0.886563 CTCCTTGAAGGTACCGTCGT 59.113 55.000 20.85 1.93 36.53 4.34
304 305 0.172803 CCTCCTTGAAGGTACCGTCG 59.827 60.000 20.85 9.13 36.53 5.12
305 306 1.553706 TCCTCCTTGAAGGTACCGTC 58.446 55.000 19.74 19.74 37.69 4.79
306 307 1.900486 CTTCCTCCTTGAAGGTACCGT 59.100 52.381 11.60 2.14 38.45 4.83
307 308 2.094130 GTCTTCCTCCTTGAAGGTACCG 60.094 54.545 11.60 0.00 41.67 4.02
308 309 2.904434 TGTCTTCCTCCTTGAAGGTACC 59.096 50.000 11.60 2.73 41.67 3.34
309 310 4.202326 TGTTGTCTTCCTCCTTGAAGGTAC 60.202 45.833 11.60 2.54 41.67 3.34
310 311 3.971305 TGTTGTCTTCCTCCTTGAAGGTA 59.029 43.478 11.60 0.00 41.67 3.08
311 312 2.777692 TGTTGTCTTCCTCCTTGAAGGT 59.222 45.455 11.60 0.00 41.67 3.50
312 313 3.492102 TGTTGTCTTCCTCCTTGAAGG 57.508 47.619 4.45 4.45 41.67 3.46
313 314 4.006319 GGATGTTGTCTTCCTCCTTGAAG 58.994 47.826 0.00 0.00 42.52 3.02
314 315 3.244911 GGGATGTTGTCTTCCTCCTTGAA 60.245 47.826 0.00 0.00 37.82 2.69
315 316 2.305927 GGGATGTTGTCTTCCTCCTTGA 59.694 50.000 0.00 0.00 37.82 3.02
316 317 2.307098 AGGGATGTTGTCTTCCTCCTTG 59.693 50.000 0.00 0.00 37.82 3.61
317 318 2.637165 AGGGATGTTGTCTTCCTCCTT 58.363 47.619 0.00 0.00 37.82 3.36
318 319 2.350863 AGGGATGTTGTCTTCCTCCT 57.649 50.000 0.00 0.00 37.82 3.69
319 320 3.133183 GTCTAGGGATGTTGTCTTCCTCC 59.867 52.174 0.00 0.00 37.82 4.30
320 321 3.181485 CGTCTAGGGATGTTGTCTTCCTC 60.181 52.174 0.00 0.00 37.82 3.71
321 322 2.761208 CGTCTAGGGATGTTGTCTTCCT 59.239 50.000 0.00 0.00 37.82 3.36
322 323 2.496470 ACGTCTAGGGATGTTGTCTTCC 59.504 50.000 0.00 0.00 38.42 3.46
323 324 3.870633 ACGTCTAGGGATGTTGTCTTC 57.129 47.619 0.00 0.00 38.42 2.87
324 325 4.342359 ACTACGTCTAGGGATGTTGTCTT 58.658 43.478 0.00 0.00 41.16 3.01
325 326 3.965694 ACTACGTCTAGGGATGTTGTCT 58.034 45.455 0.00 0.00 41.16 3.41
326 327 4.715527 AACTACGTCTAGGGATGTTGTC 57.284 45.455 0.00 0.00 43.03 3.18
327 328 5.125097 CAGTAACTACGTCTAGGGATGTTGT 59.875 44.000 0.00 0.00 44.68 3.32
328 329 5.125097 ACAGTAACTACGTCTAGGGATGTTG 59.875 44.000 0.00 0.00 41.41 3.33
329 330 5.259632 ACAGTAACTACGTCTAGGGATGTT 58.740 41.667 0.00 0.00 41.41 2.71
330 331 4.853007 ACAGTAACTACGTCTAGGGATGT 58.147 43.478 0.00 0.00 43.33 3.06
331 332 4.025061 CGACAGTAACTACGTCTAGGGATG 60.025 50.000 0.00 0.00 31.99 3.51
332 333 4.125703 CGACAGTAACTACGTCTAGGGAT 58.874 47.826 0.00 0.00 31.99 3.85
333 334 3.525537 CGACAGTAACTACGTCTAGGGA 58.474 50.000 0.00 0.00 31.99 4.20
334 335 2.611292 CCGACAGTAACTACGTCTAGGG 59.389 54.545 0.00 0.00 31.99 3.53
335 336 2.031437 GCCGACAGTAACTACGTCTAGG 59.969 54.545 0.00 0.00 31.99 3.02
336 337 2.674852 TGCCGACAGTAACTACGTCTAG 59.325 50.000 0.00 0.00 31.99 2.43
337 338 2.416547 GTGCCGACAGTAACTACGTCTA 59.583 50.000 0.00 0.00 31.99 2.59
338 339 1.198637 GTGCCGACAGTAACTACGTCT 59.801 52.381 0.00 0.00 31.99 4.18
339 340 1.198637 AGTGCCGACAGTAACTACGTC 59.801 52.381 0.00 0.00 0.00 4.34
340 341 1.068748 CAGTGCCGACAGTAACTACGT 60.069 52.381 0.00 0.00 0.00 3.57
341 342 1.198408 TCAGTGCCGACAGTAACTACG 59.802 52.381 0.00 0.00 0.00 3.51
342 343 2.228343 AGTCAGTGCCGACAGTAACTAC 59.772 50.000 0.00 0.00 38.43 2.73
343 344 2.511659 AGTCAGTGCCGACAGTAACTA 58.488 47.619 0.00 0.00 38.43 2.24
344 345 1.329256 AGTCAGTGCCGACAGTAACT 58.671 50.000 0.00 0.00 38.43 2.24
345 346 2.415625 CCTAGTCAGTGCCGACAGTAAC 60.416 54.545 0.00 0.00 38.43 2.50
346 347 1.816835 CCTAGTCAGTGCCGACAGTAA 59.183 52.381 0.00 0.00 38.43 2.24
347 348 1.271762 ACCTAGTCAGTGCCGACAGTA 60.272 52.381 0.00 0.00 38.43 2.74
348 349 0.539901 ACCTAGTCAGTGCCGACAGT 60.540 55.000 0.00 0.00 38.43 3.55
349 350 0.171455 GACCTAGTCAGTGCCGACAG 59.829 60.000 0.00 0.00 38.43 3.51
350 351 0.538746 TGACCTAGTCAGTGCCGACA 60.539 55.000 0.00 0.00 37.67 4.35
351 352 0.601558 TTGACCTAGTCAGTGCCGAC 59.398 55.000 0.00 0.00 43.69 4.79
352 353 1.204704 CATTGACCTAGTCAGTGCCGA 59.795 52.381 7.21 0.00 43.69 5.54
353 354 1.645034 CATTGACCTAGTCAGTGCCG 58.355 55.000 7.21 0.00 43.69 5.69
357 358 4.767578 ATCATGCATTGACCTAGTCAGT 57.232 40.909 0.00 0.00 43.69 3.41
358 359 6.446781 AAAATCATGCATTGACCTAGTCAG 57.553 37.500 0.00 0.00 43.69 3.51
359 360 6.839124 AAAAATCATGCATTGACCTAGTCA 57.161 33.333 0.00 0.00 41.09 3.41
360 361 8.078596 GGATAAAAATCATGCATTGACCTAGTC 58.921 37.037 0.00 0.00 37.11 2.59
361 362 7.255242 CGGATAAAAATCATGCATTGACCTAGT 60.255 37.037 0.00 0.00 37.11 2.57
362 363 7.080099 CGGATAAAAATCATGCATTGACCTAG 58.920 38.462 0.00 0.00 37.11 3.02
363 364 6.016360 CCGGATAAAAATCATGCATTGACCTA 60.016 38.462 0.00 0.00 37.11 3.08
364 365 5.221303 CCGGATAAAAATCATGCATTGACCT 60.221 40.000 0.00 0.00 37.11 3.85
365 366 4.984161 CCGGATAAAAATCATGCATTGACC 59.016 41.667 0.00 0.00 37.11 4.02
366 367 5.830912 TCCGGATAAAAATCATGCATTGAC 58.169 37.500 0.00 0.00 37.11 3.18
367 368 5.507817 GCTCCGGATAAAAATCATGCATTGA 60.508 40.000 3.57 0.00 39.12 2.57
368 369 4.682860 GCTCCGGATAAAAATCATGCATTG 59.317 41.667 3.57 0.00 0.00 2.82
369 370 4.262164 GGCTCCGGATAAAAATCATGCATT 60.262 41.667 3.57 0.00 0.00 3.56
370 371 3.256631 GGCTCCGGATAAAAATCATGCAT 59.743 43.478 3.57 0.00 0.00 3.96
371 372 2.622942 GGCTCCGGATAAAAATCATGCA 59.377 45.455 3.57 0.00 0.00 3.96
372 373 2.350772 CGGCTCCGGATAAAAATCATGC 60.351 50.000 3.57 0.00 35.56 4.06
373 374 3.138304 TCGGCTCCGGATAAAAATCATG 58.862 45.455 3.57 0.00 40.25 3.07
374 375 3.181454 ACTCGGCTCCGGATAAAAATCAT 60.181 43.478 3.57 0.00 40.25 2.45
375 376 2.169769 ACTCGGCTCCGGATAAAAATCA 59.830 45.455 3.57 0.00 40.25 2.57
376 377 2.801111 GACTCGGCTCCGGATAAAAATC 59.199 50.000 3.57 0.00 40.25 2.17
377 378 2.434702 AGACTCGGCTCCGGATAAAAAT 59.565 45.455 3.57 0.00 40.25 1.82
378 379 1.829222 AGACTCGGCTCCGGATAAAAA 59.171 47.619 3.57 0.00 40.25 1.94
379 380 1.481871 AGACTCGGCTCCGGATAAAA 58.518 50.000 3.57 0.00 40.25 1.52
380 381 1.407979 GAAGACTCGGCTCCGGATAAA 59.592 52.381 3.57 0.00 40.25 1.40
381 382 1.030457 GAAGACTCGGCTCCGGATAA 58.970 55.000 3.57 0.00 40.25 1.75
382 383 0.822532 GGAAGACTCGGCTCCGGATA 60.823 60.000 3.57 0.00 40.25 2.59
383 384 2.128507 GGAAGACTCGGCTCCGGAT 61.129 63.158 3.57 0.00 40.25 4.18
384 385 2.754658 GGAAGACTCGGCTCCGGA 60.755 66.667 2.93 2.93 40.25 5.14
385 386 2.356818 GATGGAAGACTCGGCTCCGG 62.357 65.000 8.59 0.00 40.25 5.14
386 387 1.066587 GATGGAAGACTCGGCTCCG 59.933 63.158 1.14 1.14 41.35 4.63
387 388 1.066587 CGATGGAAGACTCGGCTCC 59.933 63.158 0.00 0.00 0.00 4.70
388 389 1.066587 CCGATGGAAGACTCGGCTC 59.933 63.158 0.00 0.00 46.87 4.70
389 390 3.211288 CCGATGGAAGACTCGGCT 58.789 61.111 0.00 0.00 46.87 5.52
392 393 1.202313 GGAAGACCGATGGAAGACTCG 60.202 57.143 0.00 0.00 34.73 4.18
393 394 1.825474 TGGAAGACCGATGGAAGACTC 59.175 52.381 0.00 0.00 39.42 3.36
394 395 1.550976 GTGGAAGACCGATGGAAGACT 59.449 52.381 0.00 0.00 39.42 3.24
395 396 1.405661 GGTGGAAGACCGATGGAAGAC 60.406 57.143 0.00 0.00 39.42 3.01
396 397 0.902531 GGTGGAAGACCGATGGAAGA 59.097 55.000 0.00 0.00 39.42 2.87
397 398 3.460648 GGTGGAAGACCGATGGAAG 57.539 57.895 0.00 0.00 39.42 3.46
405 406 0.698818 AGGATGGTTGGTGGAAGACC 59.301 55.000 0.00 0.00 46.37 3.85
406 407 1.826385 CAGGATGGTTGGTGGAAGAC 58.174 55.000 0.00 0.00 0.00 3.01
419 420 1.342819 GAAGGTCTCGGATCCAGGATG 59.657 57.143 13.41 0.00 0.00 3.51
420 421 1.710816 GAAGGTCTCGGATCCAGGAT 58.289 55.000 13.41 0.00 0.00 3.24
421 422 0.397254 GGAAGGTCTCGGATCCAGGA 60.397 60.000 13.41 6.04 32.08 3.86
422 423 0.687757 TGGAAGGTCTCGGATCCAGG 60.688 60.000 13.41 3.45 37.05 4.45
423 424 2.901975 TGGAAGGTCTCGGATCCAG 58.098 57.895 13.41 8.62 37.05 3.86
424 425 0.041238 ACTGGAAGGTCTCGGATCCA 59.959 55.000 13.41 0.00 39.30 3.41
430 431 1.374758 GTGGCACTGGAAGGTCTCG 60.375 63.158 11.13 0.00 39.30 4.04
451 452 0.833287 TGTGCTTGGCTCTCCCTATC 59.167 55.000 0.00 0.00 0.00 2.08
453 454 0.835971 TGTGTGCTTGGCTCTCCCTA 60.836 55.000 0.00 0.00 0.00 3.53
456 457 0.321671 TAGTGTGTGCTTGGCTCTCC 59.678 55.000 0.00 0.00 0.00 3.71
497 499 1.002366 CTCCGATTTCTTGAGTGCGG 58.998 55.000 0.00 0.00 40.06 5.69
498 500 1.996292 TCTCCGATTTCTTGAGTGCG 58.004 50.000 0.00 0.00 0.00 5.34
506 508 1.429463 GCGTGTGTTCTCCGATTTCT 58.571 50.000 0.00 0.00 0.00 2.52
510 512 0.949105 GTTGGCGTGTGTTCTCCGAT 60.949 55.000 0.00 0.00 0.00 4.18
515 517 2.590575 CGGGTTGGCGTGTGTTCT 60.591 61.111 0.00 0.00 0.00 3.01
540 681 3.118454 CTTGGCGTGTGTAGGGCG 61.118 66.667 0.00 0.00 39.80 6.13
550 691 2.100879 GAGGTGGTCAGTCTTGGCGT 62.101 60.000 0.00 0.00 0.00 5.68
551 692 1.374758 GAGGTGGTCAGTCTTGGCG 60.375 63.158 0.00 0.00 0.00 5.69
598 755 0.391661 GCAGACCAAATCCAGCTCGA 60.392 55.000 0.00 0.00 0.00 4.04
666 823 0.523757 GCGTGTTCTCGTCTAGCTCC 60.524 60.000 0.00 0.00 0.00 4.70
713 870 4.736896 GTCGGTGGCGGTGGAGTC 62.737 72.222 0.00 0.00 0.00 3.36
715 872 4.436998 GAGTCGGTGGCGGTGGAG 62.437 72.222 0.00 0.00 0.00 3.86
723 880 3.064987 CTAGGCGTGGAGTCGGTGG 62.065 68.421 0.00 0.00 0.00 4.61
724 881 1.384989 ATCTAGGCGTGGAGTCGGTG 61.385 60.000 0.00 0.00 0.00 4.94
725 882 1.076923 ATCTAGGCGTGGAGTCGGT 60.077 57.895 0.00 0.00 0.00 4.69
726 883 1.101635 TGATCTAGGCGTGGAGTCGG 61.102 60.000 0.00 0.00 0.00 4.79
728 885 0.671251 CCTGATCTAGGCGTGGAGTC 59.329 60.000 0.00 0.00 40.38 3.36
729 886 2.814023 CCTGATCTAGGCGTGGAGT 58.186 57.895 0.00 0.00 40.38 3.85
751 908 2.513204 CCAGCTCCGTGATGCCAG 60.513 66.667 0.00 0.00 0.00 4.85
758 915 1.444553 GTTCTCGTCCAGCTCCGTG 60.445 63.158 0.00 0.00 0.00 4.94
759 916 1.901948 TGTTCTCGTCCAGCTCCGT 60.902 57.895 0.00 0.00 0.00 4.69
760 917 1.444553 GTGTTCTCGTCCAGCTCCG 60.445 63.158 0.00 0.00 0.00 4.63
767 925 0.031721 ACCGAAGTGTGTTCTCGTCC 59.968 55.000 0.00 0.00 0.00 4.79
794 952 6.876789 ACATCTAGATTCATAGACTCGACGAT 59.123 38.462 1.33 0.00 34.68 3.73
852 1010 6.150641 CCAAATCTATACCTCTGCAATCATGG 59.849 42.308 0.00 0.00 0.00 3.66
897 1055 9.025041 CCTTAAAGAAAATACAAACCCATCTCT 57.975 33.333 0.00 0.00 0.00 3.10
916 1074 6.936279 TGAGTAACTGACATCTCCCTTAAAG 58.064 40.000 0.00 0.00 0.00 1.85
920 1078 4.421131 ACTGAGTAACTGACATCTCCCTT 58.579 43.478 0.00 0.00 0.00 3.95
922 1080 4.464597 AGAACTGAGTAACTGACATCTCCC 59.535 45.833 0.00 0.00 0.00 4.30
925 1083 7.361371 CGACTAAGAACTGAGTAACTGACATCT 60.361 40.741 0.00 0.00 0.00 2.90
926 1084 6.743627 CGACTAAGAACTGAGTAACTGACATC 59.256 42.308 0.00 0.00 0.00 3.06
927 1085 6.613233 CGACTAAGAACTGAGTAACTGACAT 58.387 40.000 0.00 0.00 0.00 3.06
928 1086 5.562307 GCGACTAAGAACTGAGTAACTGACA 60.562 44.000 0.00 0.00 0.00 3.58
929 1087 4.852650 GCGACTAAGAACTGAGTAACTGAC 59.147 45.833 0.00 0.00 0.00 3.51
931 1089 5.049398 AGCGACTAAGAACTGAGTAACTG 57.951 43.478 0.00 0.00 0.00 3.16
932 1090 4.142859 CGAGCGACTAAGAACTGAGTAACT 60.143 45.833 0.00 0.00 0.00 2.24
933 1091 4.090034 CGAGCGACTAAGAACTGAGTAAC 58.910 47.826 0.00 0.00 0.00 2.50
934 1092 3.750130 ACGAGCGACTAAGAACTGAGTAA 59.250 43.478 0.00 0.00 0.00 2.24
935 1093 3.332919 ACGAGCGACTAAGAACTGAGTA 58.667 45.455 0.00 0.00 0.00 2.59
936 1094 2.152830 ACGAGCGACTAAGAACTGAGT 58.847 47.619 0.00 0.00 0.00 3.41
937 1095 2.476519 GGACGAGCGACTAAGAACTGAG 60.477 54.545 0.00 0.00 0.00 3.35
938 1096 1.467734 GGACGAGCGACTAAGAACTGA 59.532 52.381 0.00 0.00 0.00 3.41
948 1106 3.245519 GGAAAATCATAAGGACGAGCGAC 59.754 47.826 0.00 0.00 0.00 5.19
953 1111 4.998672 ACAAACGGAAAATCATAAGGACGA 59.001 37.500 0.00 0.00 0.00 4.20
1107 1628 1.282875 GAGCTGCACGGTGGTTTTC 59.717 57.895 10.60 0.00 0.00 2.29
1782 3292 2.409948 ATAGCTTCTGTGCACCCTTC 57.590 50.000 15.69 0.00 34.99 3.46
1788 3298 3.525268 TCATCGAATAGCTTCTGTGCA 57.475 42.857 0.00 0.00 34.99 4.57
1851 3361 2.681976 GCAGTACCCATTGATGAGCACT 60.682 50.000 0.00 0.00 0.00 4.40
1861 3371 1.078708 CGGTTCGGCAGTACCCATT 60.079 57.895 7.05 0.00 34.71 3.16
1875 3385 1.141053 GCATCCTGTATCTTCCCGGTT 59.859 52.381 0.00 0.00 0.00 4.44
2043 3553 2.203195 GCAGCCAGTGGTGTGTCA 60.203 61.111 11.74 0.00 42.04 3.58
2162 3672 6.128035 GCATAACCAGTACATCAATGTGTTCA 60.128 38.462 5.89 0.00 41.89 3.18
2175 3685 4.202245 TCCACTCTTGCATAACCAGTAC 57.798 45.455 0.00 0.00 0.00 2.73
2241 3751 2.234908 AGTCAGTAGGCTTGGCTTGTAG 59.765 50.000 1.22 0.00 0.00 2.74
2286 3796 0.244721 GCAGCTCCCCATTTTCACAC 59.755 55.000 0.00 0.00 0.00 3.82
2302 3812 2.750637 CTGCCCAGCCTCTTGCAG 60.751 66.667 0.00 0.00 44.43 4.41
2304 3814 4.357279 ACCTGCCCAGCCTCTTGC 62.357 66.667 0.00 0.00 41.71 4.01
2486 3996 3.297391 GGCTCAGAAAGGCTATCGG 57.703 57.895 0.00 0.00 46.82 4.18
2596 4106 7.055378 TCACTCTTAGTATCTAACACTCTCCC 58.945 42.308 0.00 0.00 0.00 4.30
2720 4232 9.508567 GGCATCAACTTACTTGAGAAATTTATC 57.491 33.333 5.86 5.86 42.36 1.75
2759 4271 7.546250 TTTCAGAGAAGTTACAGAGGAAGAT 57.454 36.000 0.00 0.00 0.00 2.40
2792 4314 8.836268 ATTGACGGTGTTAATTAGTTTCAGTA 57.164 30.769 0.00 0.00 0.00 2.74
2801 4323 7.334671 TCAATGTGCTATTGACGGTGTTAATTA 59.665 33.333 11.34 0.00 33.55 1.40
2802 4324 6.150307 TCAATGTGCTATTGACGGTGTTAATT 59.850 34.615 11.34 0.00 33.55 1.40
2803 4325 5.645929 TCAATGTGCTATTGACGGTGTTAAT 59.354 36.000 11.34 0.00 33.55 1.40
2804 4326 4.998033 TCAATGTGCTATTGACGGTGTTAA 59.002 37.500 11.34 0.00 33.55 2.01
2893 4415 2.938354 CCAAGCTTGGTGTGGAGAG 58.062 57.895 33.46 8.15 43.43 3.20
2970 4493 4.338964 TGCAACTCACTGTTTTCACATGAT 59.661 37.500 0.00 0.00 36.63 2.45
2983 4506 2.936202 ACCTTGTTCATGCAACTCACT 58.064 42.857 0.00 0.00 35.79 3.41
2986 4509 4.997395 TCTCTAACCTTGTTCATGCAACTC 59.003 41.667 0.00 0.00 35.79 3.01
2987 4510 4.973168 TCTCTAACCTTGTTCATGCAACT 58.027 39.130 0.00 0.00 35.79 3.16
2994 4525 8.602424 TCCTCAAATATTCTCTAACCTTGTTCA 58.398 33.333 0.00 0.00 0.00 3.18
3049 4580 6.578023 ACTCTACACTATTCATCCAGAAAGC 58.422 40.000 0.00 0.00 40.22 3.51
3110 4649 8.660373 CAAATGAGAACTGAATACAGAGTAACC 58.340 37.037 0.00 0.00 46.03 2.85
3323 4862 1.814429 TGTCTTTCCCTTCCCTGACA 58.186 50.000 0.00 0.00 32.91 3.58
3395 4934 7.981789 ACTCGTATCATCATCAACAACAATACT 59.018 33.333 0.00 0.00 0.00 2.12
3468 5010 8.858186 CAGAATAATATACGTGCTTCTGATCAG 58.142 37.037 17.07 17.07 41.16 2.90
3488 5030 1.571955 TGCTGACTGGGAGCAGAATA 58.428 50.000 0.00 0.00 41.56 1.75
3500 5042 0.037139 CAAGAGCTGAGCTGCTGACT 60.037 55.000 13.71 0.00 44.17 3.41
3586 5128 3.815809 TGTTTTACCAGTTCCTCCTGTG 58.184 45.455 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.