Multiple sequence alignment - TraesCS7A01G051600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G051600 chr7A 100.000 2660 0 0 1 2660 24960628 24957969 0.000000e+00 4913.0
1 TraesCS7A01G051600 chr7A 83.978 724 85 14 996 1714 24926081 24925384 0.000000e+00 665.0
2 TraesCS7A01G051600 chr7A 77.739 575 98 18 1037 1593 127910044 127910606 2.550000e-85 326.0
3 TraesCS7A01G051600 chr7A 96.774 31 1 0 1991 2021 24958523 24958493 5.000000e-03 52.8
4 TraesCS7A01G051600 chr7A 96.774 31 1 0 2106 2136 24958638 24958608 5.000000e-03 52.8
5 TraesCS7A01G051600 chr7D 93.791 1514 67 10 413 1916 24501651 24500155 0.000000e+00 2250.0
6 TraesCS7A01G051600 chr7D 84.225 710 81 16 1000 1704 24424641 24423958 0.000000e+00 662.0
7 TraesCS7A01G051600 chr7D 89.504 343 21 8 1980 2317 24499842 24499510 1.140000e-113 420.0
8 TraesCS7A01G051600 chr7D 89.720 321 28 3 1 317 24501969 24501650 3.190000e-109 405.0
9 TraesCS7A01G051600 chr7D 81.435 474 68 12 1248 1717 24468944 24469401 1.160000e-98 370.0
10 TraesCS7A01G051600 chr7D 87.584 298 34 3 1423 1720 24430493 24430199 2.540000e-90 342.0
11 TraesCS7A01G051600 chr7D 88.722 266 28 2 989 1253 24439317 24439581 9.180000e-85 324.0
12 TraesCS7A01G051600 chr7D 77.526 574 101 12 1037 1593 127419036 127418474 1.190000e-83 320.0
13 TraesCS7A01G051600 chr7D 96.774 31 1 0 2106 2136 24499831 24499801 5.000000e-03 52.8
14 TraesCS7A01G051600 chr4A 83.934 722 85 16 988 1704 707251184 707251879 0.000000e+00 662.0
15 TraesCS7A01G051600 chr7B 78.185 573 99 14 1037 1593 88974122 88974684 2.540000e-90 342.0
16 TraesCS7A01G051600 chr7B 83.041 171 29 0 1040 1210 89207080 89206910 3.550000e-34 156.0
17 TraesCS7A01G051600 chr7B 94.737 38 2 0 2514 2551 638444482 638444445 2.860000e-05 60.2
18 TraesCS7A01G051600 chr2B 74.090 714 127 40 1 665 441857842 441858546 9.510000e-60 241.0
19 TraesCS7A01G051600 chr1B 76.026 463 87 14 189 635 418668408 418668862 4.460000e-53 219.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G051600 chr7A 24957969 24960628 2659 True 1672.866667 4913 97.849333 1 2660 3 chr7A.!!$R2 2659
1 TraesCS7A01G051600 chr7A 24925384 24926081 697 True 665.000000 665 83.978000 996 1714 1 chr7A.!!$R1 718
2 TraesCS7A01G051600 chr7A 127910044 127910606 562 False 326.000000 326 77.739000 1037 1593 1 chr7A.!!$F1 556
3 TraesCS7A01G051600 chr7D 24499510 24501969 2459 True 781.950000 2250 92.447250 1 2317 4 chr7D.!!$R4 2316
4 TraesCS7A01G051600 chr7D 24423958 24424641 683 True 662.000000 662 84.225000 1000 1704 1 chr7D.!!$R1 704
5 TraesCS7A01G051600 chr7D 127418474 127419036 562 True 320.000000 320 77.526000 1037 1593 1 chr7D.!!$R3 556
6 TraesCS7A01G051600 chr4A 707251184 707251879 695 False 662.000000 662 83.934000 988 1704 1 chr4A.!!$F1 716
7 TraesCS7A01G051600 chr7B 88974122 88974684 562 False 342.000000 342 78.185000 1037 1593 1 chr7B.!!$F1 556
8 TraesCS7A01G051600 chr2B 441857842 441858546 704 False 241.000000 241 74.090000 1 665 1 chr2B.!!$F1 664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
402 424 0.033405 CAGGTTCTCCTCCGGGTCTA 60.033 60.0 0.0 0.0 43.07 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1724 1783 0.25589 GAGGCATGTACCACACCCAT 59.744 55.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 0.461870 AGCTGCGGCGATGAACATTA 60.462 50.000 12.98 0.00 44.37 1.90
46 47 5.453587 GCGATGAACATTATGAGAAAAGCAC 59.546 40.000 0.00 0.00 0.00 4.40
49 50 6.500684 TGAACATTATGAGAAAAGCACCTC 57.499 37.500 0.00 0.00 0.00 3.85
50 51 6.003326 TGAACATTATGAGAAAAGCACCTCA 58.997 36.000 0.00 0.00 42.78 3.86
121 126 1.745489 CCTACCGAGTTGCTTGGCC 60.745 63.158 0.00 0.00 38.56 5.36
151 156 4.938080 ACTACAGATCCTTGTAATGCTCG 58.062 43.478 0.00 0.00 33.44 5.03
238 260 4.467084 CCCACCGCCACGTATGCT 62.467 66.667 7.54 0.00 0.00 3.79
242 264 2.279918 CCGCCACGTATGCTACCC 60.280 66.667 7.54 0.00 0.00 3.69
266 288 1.001393 CCCTCTGCCGGCCTTTTAA 60.001 57.895 26.77 2.02 0.00 1.52
273 295 1.548269 TGCCGGCCTTTTAATTCTTGG 59.452 47.619 26.77 0.00 0.00 3.61
280 302 6.403049 CGGCCTTTTAATTCTTGGGTATTTT 58.597 36.000 0.00 0.00 0.00 1.82
302 324 1.243902 CCTTTGTGGCCTTCGCTTTA 58.756 50.000 3.32 0.00 34.44 1.85
316 338 2.968006 TCGCTTTAACGCAACGATTTTG 59.032 40.909 4.70 0.00 0.00 2.44
317 339 2.468390 CGCTTTAACGCAACGATTTTGC 60.468 45.455 4.70 0.00 41.71 3.68
318 340 2.160026 GCTTTAACGCAACGATTTTGCC 60.160 45.455 0.00 0.00 42.10 4.52
319 341 1.676057 TTAACGCAACGATTTTGCCG 58.324 45.000 3.49 2.19 42.10 5.69
320 342 0.587285 TAACGCAACGATTTTGCCGT 59.413 45.000 3.49 2.75 42.10 5.68
321 343 0.932585 AACGCAACGATTTTGCCGTG 60.933 50.000 3.49 0.00 42.10 4.94
322 344 1.369930 CGCAACGATTTTGCCGTGT 60.370 52.632 3.49 0.00 42.10 4.49
323 345 1.327292 CGCAACGATTTTGCCGTGTC 61.327 55.000 3.49 0.00 42.10 3.67
324 346 1.327292 GCAACGATTTTGCCGTGTCG 61.327 55.000 0.00 0.00 40.44 4.35
325 347 1.082366 AACGATTTTGCCGTGTCGC 60.082 52.632 0.00 0.00 40.44 5.19
326 348 2.202298 CGATTTTGCCGTGTCGCC 60.202 61.111 0.00 0.00 0.00 5.54
327 349 2.202298 GATTTTGCCGTGTCGCCG 60.202 61.111 0.00 0.00 0.00 6.46
328 350 2.666862 ATTTTGCCGTGTCGCCGA 60.667 55.556 0.00 0.00 0.00 5.54
329 351 2.177654 GATTTTGCCGTGTCGCCGAA 62.178 55.000 0.00 0.00 0.00 4.30
330 352 1.582610 ATTTTGCCGTGTCGCCGAAT 61.583 50.000 0.00 0.00 0.00 3.34
340 362 2.588106 GTGTCGCCGAATTGATTTTTCG 59.412 45.455 0.00 0.00 44.17 3.46
345 367 2.535934 CGAATTGATTTTTCGGGCGA 57.464 45.000 0.00 0.00 41.62 5.54
346 368 2.440501 CGAATTGATTTTTCGGGCGAG 58.559 47.619 0.00 0.00 41.62 5.03
347 369 2.159572 CGAATTGATTTTTCGGGCGAGT 60.160 45.455 0.00 0.00 41.62 4.18
348 370 2.919666 ATTGATTTTTCGGGCGAGTG 57.080 45.000 0.00 0.00 0.00 3.51
349 371 1.600023 TTGATTTTTCGGGCGAGTGT 58.400 45.000 0.00 0.00 0.00 3.55
350 372 0.871722 TGATTTTTCGGGCGAGTGTG 59.128 50.000 0.00 0.00 0.00 3.82
351 373 1.153353 GATTTTTCGGGCGAGTGTGA 58.847 50.000 0.00 0.00 0.00 3.58
352 374 1.737793 GATTTTTCGGGCGAGTGTGAT 59.262 47.619 0.00 0.00 0.00 3.06
353 375 0.871722 TTTTTCGGGCGAGTGTGATG 59.128 50.000 0.00 0.00 0.00 3.07
354 376 1.573829 TTTTCGGGCGAGTGTGATGC 61.574 55.000 0.00 0.00 0.00 3.91
355 377 2.449031 TTTCGGGCGAGTGTGATGCT 62.449 55.000 0.00 0.00 0.00 3.79
356 378 2.835701 TTCGGGCGAGTGTGATGCTC 62.836 60.000 0.00 0.00 0.00 4.26
362 384 3.280920 GAGTGTGATGCTCGGATCC 57.719 57.895 0.00 0.00 0.00 3.36
363 385 0.749649 GAGTGTGATGCTCGGATCCT 59.250 55.000 10.75 0.00 0.00 3.24
364 386 0.749649 AGTGTGATGCTCGGATCCTC 59.250 55.000 10.75 0.08 0.00 3.71
365 387 0.249657 GTGTGATGCTCGGATCCTCC 60.250 60.000 10.75 0.00 0.00 4.30
366 388 0.687427 TGTGATGCTCGGATCCTCCA 60.687 55.000 10.75 4.25 35.91 3.86
367 389 0.249657 GTGATGCTCGGATCCTCCAC 60.250 60.000 10.75 4.95 35.91 4.02
368 390 1.369321 GATGCTCGGATCCTCCACC 59.631 63.158 10.75 0.00 35.91 4.61
369 391 1.383109 ATGCTCGGATCCTCCACCA 60.383 57.895 10.75 0.15 35.91 4.17
370 392 0.765903 ATGCTCGGATCCTCCACCAT 60.766 55.000 10.75 2.60 35.91 3.55
371 393 1.369321 GCTCGGATCCTCCACCATC 59.631 63.158 10.75 0.00 35.91 3.51
372 394 1.118356 GCTCGGATCCTCCACCATCT 61.118 60.000 10.75 0.00 35.91 2.90
373 395 0.965439 CTCGGATCCTCCACCATCTC 59.035 60.000 10.75 0.00 35.91 2.75
374 396 0.470080 TCGGATCCTCCACCATCTCC 60.470 60.000 10.75 0.00 35.91 3.71
375 397 1.810606 CGGATCCTCCACCATCTCCG 61.811 65.000 10.75 0.00 39.58 4.63
376 398 0.760945 GGATCCTCCACCATCTCCGT 60.761 60.000 3.84 0.00 36.28 4.69
377 399 0.676736 GATCCTCCACCATCTCCGTC 59.323 60.000 0.00 0.00 0.00 4.79
378 400 0.263172 ATCCTCCACCATCTCCGTCT 59.737 55.000 0.00 0.00 0.00 4.18
379 401 0.395862 TCCTCCACCATCTCCGTCTC 60.396 60.000 0.00 0.00 0.00 3.36
380 402 0.396417 CCTCCACCATCTCCGTCTCT 60.396 60.000 0.00 0.00 0.00 3.10
381 403 0.743688 CTCCACCATCTCCGTCTCTG 59.256 60.000 0.00 0.00 0.00 3.35
382 404 0.684479 TCCACCATCTCCGTCTCTGG 60.684 60.000 0.00 0.00 34.84 3.86
383 405 1.142748 CACCATCTCCGTCTCTGGC 59.857 63.158 0.00 0.00 31.72 4.85
384 406 1.305297 ACCATCTCCGTCTCTGGCA 60.305 57.895 0.00 0.00 31.72 4.92
385 407 1.326213 ACCATCTCCGTCTCTGGCAG 61.326 60.000 8.58 8.58 31.72 4.85
386 408 1.440893 CATCTCCGTCTCTGGCAGG 59.559 63.158 15.73 5.63 0.00 4.85
387 409 1.000993 ATCTCCGTCTCTGGCAGGT 59.999 57.895 15.73 0.00 0.00 4.00
388 410 0.616111 ATCTCCGTCTCTGGCAGGTT 60.616 55.000 15.73 0.00 0.00 3.50
389 411 1.216710 CTCCGTCTCTGGCAGGTTC 59.783 63.158 15.73 4.30 0.00 3.62
390 412 1.228894 TCCGTCTCTGGCAGGTTCT 60.229 57.895 15.73 0.00 0.00 3.01
391 413 1.216710 CCGTCTCTGGCAGGTTCTC 59.783 63.158 15.73 0.77 0.00 2.87
392 414 1.216710 CGTCTCTGGCAGGTTCTCC 59.783 63.158 15.73 0.00 0.00 3.71
393 415 1.254284 CGTCTCTGGCAGGTTCTCCT 61.254 60.000 15.73 0.00 46.37 3.69
394 416 0.534873 GTCTCTGGCAGGTTCTCCTC 59.465 60.000 15.73 0.00 43.07 3.71
395 417 0.616111 TCTCTGGCAGGTTCTCCTCC 60.616 60.000 15.73 0.00 43.07 4.30
396 418 1.954362 CTCTGGCAGGTTCTCCTCCG 61.954 65.000 15.73 0.00 43.07 4.63
397 419 3.003173 TGGCAGGTTCTCCTCCGG 61.003 66.667 0.00 0.00 43.07 5.14
398 420 3.787001 GGCAGGTTCTCCTCCGGG 61.787 72.222 0.00 0.00 43.07 5.73
399 421 3.003763 GCAGGTTCTCCTCCGGGT 61.004 66.667 0.00 0.00 43.07 5.28
400 422 3.020237 GCAGGTTCTCCTCCGGGTC 62.020 68.421 0.00 0.00 43.07 4.46
401 423 1.305381 CAGGTTCTCCTCCGGGTCT 60.305 63.158 0.00 0.00 43.07 3.85
402 424 0.033405 CAGGTTCTCCTCCGGGTCTA 60.033 60.000 0.00 0.00 43.07 2.59
403 425 0.935194 AGGTTCTCCTCCGGGTCTAT 59.065 55.000 0.00 0.00 40.58 1.98
404 426 1.041437 GGTTCTCCTCCGGGTCTATG 58.959 60.000 0.00 0.00 0.00 2.23
405 427 0.389757 GTTCTCCTCCGGGTCTATGC 59.610 60.000 0.00 0.00 0.00 3.14
406 428 1.107538 TTCTCCTCCGGGTCTATGCG 61.108 60.000 0.00 0.00 0.00 4.73
407 429 1.828660 CTCCTCCGGGTCTATGCGT 60.829 63.158 0.00 0.00 0.00 5.24
408 430 1.797211 CTCCTCCGGGTCTATGCGTC 61.797 65.000 0.00 0.00 0.00 5.19
409 431 2.331805 CTCCGGGTCTATGCGTCG 59.668 66.667 0.00 0.00 0.00 5.12
410 432 3.195591 CTCCGGGTCTATGCGTCGG 62.196 68.421 0.00 0.00 41.80 4.79
411 433 4.944372 CCGGGTCTATGCGTCGGC 62.944 72.222 0.00 0.00 40.52 5.54
412 434 3.900892 CGGGTCTATGCGTCGGCT 61.901 66.667 0.00 0.00 40.82 5.52
416 438 1.433879 GTCTATGCGTCGGCTGAGT 59.566 57.895 0.00 0.00 40.82 3.41
443 465 4.345547 GGAAGAAGAGAGTAGGGTATTGGG 59.654 50.000 0.00 0.00 0.00 4.12
453 475 0.979187 GGGTATTGGGTGGAGACCGA 60.979 60.000 0.00 0.00 44.23 4.69
478 500 4.720273 GGGATGGAAGAAGAAAGTAGGGTA 59.280 45.833 0.00 0.00 0.00 3.69
488 510 1.375551 AAGTAGGGTATTTTGCCGCG 58.624 50.000 0.00 0.00 0.00 6.46
489 511 0.463116 AGTAGGGTATTTTGCCGCGG 60.463 55.000 24.05 24.05 0.00 6.46
503 525 2.822255 GCGGAAATAGTGCGGCCA 60.822 61.111 2.24 0.00 42.17 5.36
505 527 2.180204 CGGAAATAGTGCGGCCAGG 61.180 63.158 2.24 0.00 37.43 4.45
515 537 0.887387 TGCGGCCAGGTACAAAAGTC 60.887 55.000 2.24 0.00 0.00 3.01
522 544 0.323957 AGGTACAAAAGTCCGGGCTC 59.676 55.000 10.20 0.00 0.00 4.70
552 574 3.661648 GGTGGGCATGGGGTGTCT 61.662 66.667 0.00 0.00 31.47 3.41
569 591 0.888619 TCTGAGACCTACGTGGCTTG 59.111 55.000 0.00 0.00 40.22 4.01
576 598 0.670546 CCTACGTGGCTTGTGTCCAG 60.671 60.000 0.00 0.00 33.63 3.86
577 599 0.670546 CTACGTGGCTTGTGTCCAGG 60.671 60.000 0.00 0.00 43.14 4.45
588 610 0.955919 GTGTCCAGGCTCCGGAAAAG 60.956 60.000 5.23 0.00 33.29 2.27
590 612 2.224159 TCCAGGCTCCGGAAAAGCT 61.224 57.895 5.23 0.00 39.75 3.74
593 615 2.438614 GGCTCCGGAAAAGCTCCC 60.439 66.667 5.23 0.00 41.87 4.30
595 617 1.002011 GCTCCGGAAAAGCTCCCTT 60.002 57.895 5.23 0.00 41.87 3.95
597 619 0.324943 CTCCGGAAAAGCTCCCTTGA 59.675 55.000 5.23 0.00 41.87 3.02
598 620 0.991920 TCCGGAAAAGCTCCCTTGAT 59.008 50.000 0.00 0.00 41.87 2.57
603 625 3.005791 CGGAAAAGCTCCCTTGATTTTGT 59.994 43.478 0.00 0.00 41.87 2.83
606 628 5.466728 GGAAAAGCTCCCTTGATTTTGTTTC 59.533 40.000 0.00 0.00 38.44 2.78
640 662 4.988716 TGTGGTCCGGACGGCTCT 62.989 66.667 27.68 0.00 34.68 4.09
642 664 4.988716 TGGTCCGGACGGCTCTGT 62.989 66.667 27.68 0.00 34.68 3.41
647 669 3.374402 CGGACGGCTCTGTGGACT 61.374 66.667 0.00 0.00 0.00 3.85
656 678 1.406614 GCTCTGTGGACTGATTGGAGG 60.407 57.143 0.00 0.00 0.00 4.30
666 688 1.002624 GATTGGAGGCGGTGTTGGA 60.003 57.895 0.00 0.00 0.00 3.53
672 694 4.410400 GGCGGTGTTGGAGGAGGG 62.410 72.222 0.00 0.00 0.00 4.30
674 696 2.982130 CGGTGTTGGAGGAGGGAG 59.018 66.667 0.00 0.00 0.00 4.30
675 697 1.609501 CGGTGTTGGAGGAGGGAGA 60.610 63.158 0.00 0.00 0.00 3.71
676 698 1.608717 CGGTGTTGGAGGAGGGAGAG 61.609 65.000 0.00 0.00 0.00 3.20
677 699 0.252284 GGTGTTGGAGGAGGGAGAGA 60.252 60.000 0.00 0.00 0.00 3.10
678 700 1.190643 GTGTTGGAGGAGGGAGAGAG 58.809 60.000 0.00 0.00 0.00 3.20
679 701 1.084866 TGTTGGAGGAGGGAGAGAGA 58.915 55.000 0.00 0.00 0.00 3.10
680 702 1.006519 TGTTGGAGGAGGGAGAGAGAG 59.993 57.143 0.00 0.00 0.00 3.20
681 703 1.006639 GTTGGAGGAGGGAGAGAGAGT 59.993 57.143 0.00 0.00 0.00 3.24
696 718 2.843730 AGAGAGTGAGAGTGCCTCTAGA 59.156 50.000 4.89 0.00 41.35 2.43
713 735 2.850695 AGAAGGTACTCCCTCCGATT 57.149 50.000 0.00 0.00 45.47 3.34
724 746 4.177026 CTCCCTCCGATTCATAATAAGCG 58.823 47.826 0.00 0.00 37.96 4.68
754 776 9.569122 TAGTTTGAACTAAGGTTGAATTAAGCT 57.431 29.630 1.25 0.00 43.12 3.74
769 791 8.722342 TGAATTAAGCTTAGTTTAAAACTGCG 57.278 30.769 14.61 0.00 42.84 5.18
789 811 0.179004 ACACTTGGCCGTTGGATCAA 60.179 50.000 0.00 0.00 0.00 2.57
797 819 2.359900 GCCGTTGGATCAAGATCTGTT 58.640 47.619 9.69 0.00 37.92 3.16
799 821 2.679837 CCGTTGGATCAAGATCTGTTGG 59.320 50.000 9.69 4.38 37.92 3.77
865 887 6.407074 GCCTAGTCGCTCCCATAAATACATAT 60.407 42.308 0.00 0.00 0.00 1.78
872 894 2.612212 CCCATAAATACATATCGCGGGC 59.388 50.000 6.13 0.00 0.00 6.13
934 956 1.814394 TGCCACGAACGTAGTACATCT 59.186 47.619 0.38 0.00 45.00 2.90
961 983 2.736144 TAACGATCGTTGGCTCAAGT 57.264 45.000 36.88 15.15 38.92 3.16
962 984 1.878953 AACGATCGTTGGCTCAAGTT 58.121 45.000 31.27 4.19 36.91 2.66
963 985 2.736144 ACGATCGTTGGCTCAAGTTA 57.264 45.000 16.60 0.00 0.00 2.24
985 1007 7.605309 AGTTATTACTAGCAAGTACACCAAACC 59.395 37.037 0.00 0.00 37.94 3.27
994 1016 5.175859 CAAGTACACCAAACCTACATCGAT 58.824 41.667 0.00 0.00 0.00 3.59
1016 1038 3.797353 GATGGCCGAGCAGGGGAA 61.797 66.667 0.00 0.00 41.48 3.97
1090 1112 3.153270 TTAGCGTGCGTGGTCACCA 62.153 57.895 0.00 0.00 33.57 4.17
1738 1797 2.704065 GCTAGGTATGGGTGTGGTACAT 59.296 50.000 0.00 0.00 44.52 2.29
1766 1825 4.093472 AGACTGTAGTAGGCTCGATGAT 57.907 45.455 0.00 0.00 42.87 2.45
1785 1844 2.248140 CGTGCACGTTTGATGCGT 59.752 55.556 30.50 0.00 46.49 5.24
1846 1915 3.560481 TCTGATTCTCTACCGTGTCGATC 59.440 47.826 0.00 0.00 0.00 3.69
1857 1926 0.985549 GTGTCGATCGAGTTGTGAGC 59.014 55.000 20.09 4.51 0.00 4.26
1951 2044 5.873146 GGGATTACCTACTCTTAGTGCTT 57.127 43.478 0.00 0.00 35.85 3.91
1952 2045 6.973460 GGGATTACCTACTCTTAGTGCTTA 57.027 41.667 0.00 0.00 35.85 3.09
1953 2046 7.541916 GGGATTACCTACTCTTAGTGCTTAT 57.458 40.000 0.00 0.00 35.85 1.73
1954 2047 7.964624 GGGATTACCTACTCTTAGTGCTTATT 58.035 38.462 0.00 0.00 35.85 1.40
1955 2048 7.873505 GGGATTACCTACTCTTAGTGCTTATTG 59.126 40.741 0.00 0.00 35.85 1.90
1956 2049 7.385478 GGATTACCTACTCTTAGTGCTTATTGC 59.615 40.741 0.00 0.00 43.25 3.56
1972 2065 6.846350 GCTTATTGCAGAGAACAACTATTGT 58.154 36.000 0.00 0.00 43.38 2.71
1973 2066 6.963805 GCTTATTGCAGAGAACAACTATTGTC 59.036 38.462 0.00 0.00 41.77 3.18
1974 2067 5.886960 ATTGCAGAGAACAACTATTGTCC 57.113 39.130 0.00 0.00 44.59 4.02
1975 2068 4.350368 TGCAGAGAACAACTATTGTCCA 57.650 40.909 0.00 0.00 44.59 4.02
1976 2069 4.713553 TGCAGAGAACAACTATTGTCCAA 58.286 39.130 0.00 0.00 44.59 3.53
1977 2070 5.316167 TGCAGAGAACAACTATTGTCCAAT 58.684 37.500 0.00 0.00 44.59 3.16
1978 2071 5.769662 TGCAGAGAACAACTATTGTCCAATT 59.230 36.000 0.00 0.00 44.59 2.32
2115 2433 7.820044 TTGTCGGCAAAATATTTAATCCAAC 57.180 32.000 0.00 0.08 0.00 3.77
2116 2434 6.030849 TGTCGGCAAAATATTTAATCCAACG 58.969 36.000 0.01 0.96 0.00 4.10
2117 2435 6.031471 GTCGGCAAAATATTTAATCCAACGT 58.969 36.000 0.01 0.00 0.00 3.99
2118 2436 6.528774 GTCGGCAAAATATTTAATCCAACGTT 59.471 34.615 0.01 0.00 0.00 3.99
2120 2438 8.242053 TCGGCAAAATATTTAATCCAACGTTTA 58.758 29.630 0.00 0.00 0.00 2.01
2121 2439 8.315341 CGGCAAAATATTTAATCCAACGTTTAC 58.685 33.333 0.00 0.00 0.00 2.01
2122 2440 8.597227 GGCAAAATATTTAATCCAACGTTTACC 58.403 33.333 0.00 0.00 0.00 2.85
2123 2441 9.141400 GCAAAATATTTAATCCAACGTTTACCA 57.859 29.630 0.00 0.00 0.00 3.25
2130 2448 8.618702 TTTAATCCAACGTTTACCACAATAGA 57.381 30.769 0.00 0.00 0.00 1.98
2131 2449 6.490566 AATCCAACGTTTACCACAATAGAC 57.509 37.500 0.00 0.00 0.00 2.59
2132 2450 4.958509 TCCAACGTTTACCACAATAGACA 58.041 39.130 0.00 0.00 0.00 3.41
2133 2451 5.366460 TCCAACGTTTACCACAATAGACAA 58.634 37.500 0.00 0.00 0.00 3.18
2232 2554 7.696453 GCTACACGCTAAAATTCATACACATTT 59.304 33.333 0.00 0.00 35.14 2.32
2233 2555 9.554724 CTACACGCTAAAATTCATACACATTTT 57.445 29.630 0.00 0.00 36.69 1.82
2234 2556 8.810652 ACACGCTAAAATTCATACACATTTTT 57.189 26.923 0.00 0.00 34.94 1.94
2317 2639 0.400213 TTCTGCCACCCGTCAGAAAT 59.600 50.000 2.57 0.00 43.79 2.17
2318 2640 1.271856 TCTGCCACCCGTCAGAAATA 58.728 50.000 0.00 0.00 36.50 1.40
2319 2641 1.626321 TCTGCCACCCGTCAGAAATAA 59.374 47.619 0.00 0.00 36.50 1.40
2320 2642 2.238646 TCTGCCACCCGTCAGAAATAAT 59.761 45.455 0.00 0.00 36.50 1.28
2321 2643 3.016736 CTGCCACCCGTCAGAAATAATT 58.983 45.455 0.00 0.00 32.26 1.40
2322 2644 3.426615 TGCCACCCGTCAGAAATAATTT 58.573 40.909 0.00 0.00 0.00 1.82
2323 2645 3.829601 TGCCACCCGTCAGAAATAATTTT 59.170 39.130 0.00 0.00 0.00 1.82
2324 2646 4.082463 TGCCACCCGTCAGAAATAATTTTC 60.082 41.667 0.00 0.00 41.34 2.29
2325 2647 4.082463 GCCACCCGTCAGAAATAATTTTCA 60.082 41.667 1.74 0.00 43.09 2.69
2326 2648 5.394115 GCCACCCGTCAGAAATAATTTTCAT 60.394 40.000 1.74 0.00 43.09 2.57
2327 2649 6.265577 CCACCCGTCAGAAATAATTTTCATC 58.734 40.000 1.74 0.00 43.09 2.92
2328 2650 6.265577 CACCCGTCAGAAATAATTTTCATCC 58.734 40.000 1.74 0.00 43.09 3.51
2329 2651 5.359860 ACCCGTCAGAAATAATTTTCATCCC 59.640 40.000 1.74 0.00 43.09 3.85
2330 2652 5.221244 CCCGTCAGAAATAATTTTCATCCCC 60.221 44.000 1.74 0.00 43.09 4.81
2331 2653 5.221244 CCGTCAGAAATAATTTTCATCCCCC 60.221 44.000 1.74 0.00 43.09 5.40
2332 2654 5.594317 CGTCAGAAATAATTTTCATCCCCCT 59.406 40.000 1.74 0.00 43.09 4.79
2333 2655 6.770785 CGTCAGAAATAATTTTCATCCCCCTA 59.229 38.462 1.74 0.00 43.09 3.53
2334 2656 7.284489 CGTCAGAAATAATTTTCATCCCCCTAA 59.716 37.037 1.74 0.00 43.09 2.69
2335 2657 8.977412 GTCAGAAATAATTTTCATCCCCCTAAA 58.023 33.333 1.74 0.00 43.09 1.85
2336 2658 9.728100 TCAGAAATAATTTTCATCCCCCTAAAT 57.272 29.630 1.74 0.00 43.09 1.40
2337 2659 9.768662 CAGAAATAATTTTCATCCCCCTAAATG 57.231 33.333 1.74 0.00 43.09 2.32
2338 2660 9.728100 AGAAATAATTTTCATCCCCCTAAATGA 57.272 29.630 1.74 0.00 43.09 2.57
2341 2663 6.752285 AATTTTCATCCCCCTAAATGATGG 57.248 37.500 0.00 0.00 37.17 3.51
2342 2664 5.480058 TTTTCATCCCCCTAAATGATGGA 57.520 39.130 0.00 0.00 37.17 3.41
2343 2665 5.684853 TTTCATCCCCCTAAATGATGGAT 57.315 39.130 0.00 0.00 37.17 3.41
2344 2666 5.684853 TTCATCCCCCTAAATGATGGATT 57.315 39.130 0.00 0.00 37.17 3.01
2345 2667 6.795192 TTCATCCCCCTAAATGATGGATTA 57.205 37.500 0.00 0.00 37.17 1.75
2346 2668 6.392911 TCATCCCCCTAAATGATGGATTAG 57.607 41.667 0.00 0.00 37.17 1.73
2347 2669 6.097753 TCATCCCCCTAAATGATGGATTAGA 58.902 40.000 0.00 0.00 37.17 2.10
2348 2670 5.843019 TCCCCCTAAATGATGGATTAGAC 57.157 43.478 0.00 0.00 32.10 2.59
2349 2671 4.601857 TCCCCCTAAATGATGGATTAGACC 59.398 45.833 0.00 0.00 32.10 3.85
2350 2672 4.603610 CCCCCTAAATGATGGATTAGACCT 59.396 45.833 0.00 0.00 32.10 3.85
2351 2673 5.515534 CCCCCTAAATGATGGATTAGACCTG 60.516 48.000 0.00 0.00 32.10 4.00
2352 2674 5.515534 CCCCTAAATGATGGATTAGACCTGG 60.516 48.000 0.00 0.00 32.10 4.45
2353 2675 5.073691 CCCTAAATGATGGATTAGACCTGGT 59.926 44.000 0.00 0.00 32.10 4.00
2354 2676 6.410853 CCCTAAATGATGGATTAGACCTGGTT 60.411 42.308 0.00 0.00 32.10 3.67
2355 2677 6.488006 CCTAAATGATGGATTAGACCTGGTTG 59.512 42.308 0.00 0.00 32.10 3.77
2356 2678 3.281727 TGATGGATTAGACCTGGTTGC 57.718 47.619 0.00 0.00 0.00 4.17
2357 2679 2.575735 TGATGGATTAGACCTGGTTGCA 59.424 45.455 0.00 0.00 0.00 4.08
2358 2680 2.489938 TGGATTAGACCTGGTTGCAC 57.510 50.000 0.00 0.00 0.00 4.57
2359 2681 1.338674 TGGATTAGACCTGGTTGCACG 60.339 52.381 0.00 0.00 0.00 5.34
2360 2682 1.066430 GGATTAGACCTGGTTGCACGA 60.066 52.381 0.00 0.00 0.00 4.35
2361 2683 2.614481 GGATTAGACCTGGTTGCACGAA 60.614 50.000 0.00 0.00 0.00 3.85
2362 2684 2.623878 TTAGACCTGGTTGCACGAAA 57.376 45.000 0.00 0.00 0.00 3.46
2363 2685 2.851263 TAGACCTGGTTGCACGAAAT 57.149 45.000 0.00 0.00 0.00 2.17
2364 2686 2.851263 AGACCTGGTTGCACGAAATA 57.149 45.000 0.00 0.00 0.00 1.40
2365 2687 2.699954 AGACCTGGTTGCACGAAATAG 58.300 47.619 0.00 0.00 0.00 1.73
2366 2688 2.038557 AGACCTGGTTGCACGAAATAGT 59.961 45.455 0.00 0.00 0.00 2.12
2367 2689 3.259876 AGACCTGGTTGCACGAAATAGTA 59.740 43.478 0.00 0.00 0.00 1.82
2368 2690 3.596214 ACCTGGTTGCACGAAATAGTAG 58.404 45.455 0.00 0.00 0.00 2.57
2369 2691 3.007614 ACCTGGTTGCACGAAATAGTAGT 59.992 43.478 0.00 0.00 0.00 2.73
2370 2692 3.617263 CCTGGTTGCACGAAATAGTAGTC 59.383 47.826 0.00 0.00 0.00 2.59
2371 2693 4.242475 CTGGTTGCACGAAATAGTAGTCA 58.758 43.478 0.00 0.00 0.00 3.41
2372 2694 4.242475 TGGTTGCACGAAATAGTAGTCAG 58.758 43.478 0.00 0.00 0.00 3.51
2373 2695 4.021807 TGGTTGCACGAAATAGTAGTCAGA 60.022 41.667 0.00 0.00 0.00 3.27
2374 2696 4.326548 GGTTGCACGAAATAGTAGTCAGAC 59.673 45.833 0.00 0.00 0.00 3.51
2375 2697 5.162075 GTTGCACGAAATAGTAGTCAGACT 58.838 41.667 8.50 8.50 0.00 3.24
2376 2698 6.320171 GTTGCACGAAATAGTAGTCAGACTA 58.680 40.000 6.15 6.15 36.38 2.59
2377 2699 6.505044 TGCACGAAATAGTAGTCAGACTAA 57.495 37.500 12.12 0.00 35.58 2.24
2378 2700 6.916440 TGCACGAAATAGTAGTCAGACTAAA 58.084 36.000 12.12 4.26 35.58 1.85
2379 2701 7.544622 TGCACGAAATAGTAGTCAGACTAAAT 58.455 34.615 12.12 6.39 35.58 1.40
2380 2702 7.701078 TGCACGAAATAGTAGTCAGACTAAATC 59.299 37.037 12.12 0.36 35.58 2.17
2381 2703 7.167801 GCACGAAATAGTAGTCAGACTAAATCC 59.832 40.741 12.12 0.00 35.58 3.01
2382 2704 7.648510 CACGAAATAGTAGTCAGACTAAATCCC 59.351 40.741 12.12 0.00 35.58 3.85
2383 2705 7.341256 ACGAAATAGTAGTCAGACTAAATCCCA 59.659 37.037 12.12 0.00 35.58 4.37
2384 2706 8.361139 CGAAATAGTAGTCAGACTAAATCCCAT 58.639 37.037 12.12 0.00 35.58 4.00
2390 2712 8.432805 AGTAGTCAGACTAAATCCCATTATTGG 58.567 37.037 12.12 0.00 36.18 3.16
2391 2713 7.213178 AGTCAGACTAAATCCCATTATTGGT 57.787 36.000 0.00 0.00 41.91 3.67
2392 2714 7.643123 AGTCAGACTAAATCCCATTATTGGTT 58.357 34.615 0.00 0.00 41.91 3.67
2393 2715 7.557719 AGTCAGACTAAATCCCATTATTGGTTG 59.442 37.037 0.00 0.00 41.91 3.77
2394 2716 6.833416 TCAGACTAAATCCCATTATTGGTTGG 59.167 38.462 3.08 0.00 41.91 3.77
2395 2717 6.607198 CAGACTAAATCCCATTATTGGTTGGT 59.393 38.462 3.08 0.00 41.91 3.67
2396 2718 6.833933 AGACTAAATCCCATTATTGGTTGGTC 59.166 38.462 11.10 11.10 41.91 4.02
2397 2719 6.498538 ACTAAATCCCATTATTGGTTGGTCA 58.501 36.000 3.08 0.00 41.91 4.02
2398 2720 5.937975 AAATCCCATTATTGGTTGGTCAG 57.062 39.130 3.08 0.00 41.91 3.51
2399 2721 2.733956 TCCCATTATTGGTTGGTCAGC 58.266 47.619 3.08 0.00 41.91 4.26
2400 2722 1.756538 CCCATTATTGGTTGGTCAGCC 59.243 52.381 3.08 0.00 41.91 4.85
2401 2723 2.455557 CCATTATTGGTTGGTCAGCCA 58.544 47.619 2.35 2.35 40.04 4.75
2420 2742 2.271800 CAACTATTGGAGACTCGTGGC 58.728 52.381 0.00 0.00 0.00 5.01
2421 2743 0.824759 ACTATTGGAGACTCGTGGCC 59.175 55.000 0.00 0.00 0.00 5.36
2422 2744 0.824109 CTATTGGAGACTCGTGGCCA 59.176 55.000 0.00 0.00 0.00 5.36
2423 2745 0.824109 TATTGGAGACTCGTGGCCAG 59.176 55.000 5.11 0.00 0.00 4.85
2424 2746 1.903877 ATTGGAGACTCGTGGCCAGG 61.904 60.000 19.57 19.57 0.00 4.45
2425 2747 2.680352 GGAGACTCGTGGCCAGGA 60.680 66.667 25.73 25.73 0.00 3.86
2426 2748 2.060980 GGAGACTCGTGGCCAGGAT 61.061 63.158 27.35 17.36 0.00 3.24
2427 2749 1.617947 GGAGACTCGTGGCCAGGATT 61.618 60.000 27.35 22.23 0.00 3.01
2428 2750 0.460987 GAGACTCGTGGCCAGGATTG 60.461 60.000 27.35 19.03 0.00 2.67
2429 2751 1.194781 AGACTCGTGGCCAGGATTGT 61.195 55.000 27.35 21.99 0.00 2.71
2430 2752 1.003355 ACTCGTGGCCAGGATTGTG 60.003 57.895 27.35 18.00 0.00 3.33
2431 2753 2.359850 TCGTGGCCAGGATTGTGC 60.360 61.111 23.92 0.00 0.00 4.57
2432 2754 2.360350 CGTGGCCAGGATTGTGCT 60.360 61.111 20.97 0.00 0.00 4.40
2433 2755 1.078497 CGTGGCCAGGATTGTGCTA 60.078 57.895 20.97 0.00 0.00 3.49
2434 2756 0.676466 CGTGGCCAGGATTGTGCTAA 60.676 55.000 20.97 0.00 0.00 3.09
2435 2757 1.098050 GTGGCCAGGATTGTGCTAAG 58.902 55.000 5.11 0.00 0.00 2.18
2436 2758 0.680921 TGGCCAGGATTGTGCTAAGC 60.681 55.000 0.00 0.00 0.00 3.09
2437 2759 0.680921 GGCCAGGATTGTGCTAAGCA 60.681 55.000 0.00 0.00 35.60 3.91
2438 2760 1.396653 GCCAGGATTGTGCTAAGCAT 58.603 50.000 0.00 0.00 41.91 3.79
2439 2761 1.336125 GCCAGGATTGTGCTAAGCATC 59.664 52.381 0.00 0.00 41.91 3.91
2440 2762 1.600957 CCAGGATTGTGCTAAGCATCG 59.399 52.381 0.00 0.00 41.91 3.84
2441 2763 1.600957 CAGGATTGTGCTAAGCATCGG 59.399 52.381 0.00 0.00 41.91 4.18
2442 2764 0.947244 GGATTGTGCTAAGCATCGGG 59.053 55.000 0.00 0.00 41.91 5.14
2443 2765 0.308993 GATTGTGCTAAGCATCGGGC 59.691 55.000 0.00 0.00 41.91 6.13
2452 2774 3.190878 GCATCGGGCAAGTCTTGG 58.809 61.111 14.40 0.00 43.97 3.61
2453 2775 2.409870 GCATCGGGCAAGTCTTGGG 61.410 63.158 14.40 0.00 43.97 4.12
2454 2776 2.044946 ATCGGGCAAGTCTTGGGC 60.045 61.111 14.40 7.26 0.00 5.36
2455 2777 3.645268 ATCGGGCAAGTCTTGGGCC 62.645 63.158 14.40 14.15 46.99 5.80
2458 2780 3.869481 GGCAAGTCTTGGGCCAAA 58.131 55.556 21.28 8.66 46.92 3.28
2459 2781 1.367471 GGCAAGTCTTGGGCCAAAC 59.633 57.895 21.28 19.37 46.92 2.93
2460 2782 1.398958 GGCAAGTCTTGGGCCAAACA 61.399 55.000 21.28 6.96 46.92 2.83
2461 2783 0.249447 GCAAGTCTTGGGCCAAACAC 60.249 55.000 21.28 18.67 0.00 3.32
2462 2784 1.402787 CAAGTCTTGGGCCAAACACT 58.597 50.000 21.28 20.56 0.00 3.55
2463 2785 2.582052 CAAGTCTTGGGCCAAACACTA 58.418 47.619 24.00 2.33 0.00 2.74
2464 2786 2.554032 CAAGTCTTGGGCCAAACACTAG 59.446 50.000 24.00 11.75 0.00 2.57
2465 2787 0.881796 GTCTTGGGCCAAACACTAGC 59.118 55.000 21.28 0.24 0.00 3.42
2466 2788 0.771127 TCTTGGGCCAAACACTAGCT 59.229 50.000 21.28 0.00 0.00 3.32
2467 2789 1.982226 TCTTGGGCCAAACACTAGCTA 59.018 47.619 21.28 0.00 0.00 3.32
2468 2790 2.084546 CTTGGGCCAAACACTAGCTAC 58.915 52.381 21.28 0.00 0.00 3.58
2469 2791 1.060729 TGGGCCAAACACTAGCTACA 58.939 50.000 2.13 0.00 0.00 2.74
2470 2792 1.003118 TGGGCCAAACACTAGCTACAG 59.997 52.381 2.13 0.00 0.00 2.74
2471 2793 1.003233 GGGCCAAACACTAGCTACAGT 59.997 52.381 4.39 0.00 0.00 3.55
2475 2797 3.306502 GCCAAACACTAGCTACAGTGGTA 60.307 47.826 18.57 0.00 45.75 3.25
2476 2798 4.801581 GCCAAACACTAGCTACAGTGGTAA 60.802 45.833 18.57 0.00 45.75 2.85
2477 2799 5.302360 CCAAACACTAGCTACAGTGGTAAA 58.698 41.667 18.57 0.00 45.75 2.01
2478 2800 5.178809 CCAAACACTAGCTACAGTGGTAAAC 59.821 44.000 18.57 0.00 45.75 2.01
2479 2801 5.803237 AACACTAGCTACAGTGGTAAACT 57.197 39.130 18.57 0.00 44.65 2.66
2480 2802 5.780984 AACACTAGCTACAGTGGTAAACTC 58.219 41.667 18.57 0.00 44.65 3.01
2481 2803 5.303589 AACACTAGCTACAGTGGTAAACTCA 59.696 40.000 18.57 0.00 44.65 3.41
2482 2804 5.162075 CACTAGCTACAGTGGTAAACTCAC 58.838 45.833 8.54 0.00 41.88 3.51
2483 2805 5.047943 CACTAGCTACAGTGGTAAACTCACT 60.048 44.000 8.54 0.00 45.29 3.41
2484 2806 6.150641 CACTAGCTACAGTGGTAAACTCACTA 59.849 42.308 8.54 0.00 42.87 2.74
2485 2807 5.388408 AGCTACAGTGGTAAACTCACTAC 57.612 43.478 0.00 0.00 42.87 2.73
2486 2808 4.831155 AGCTACAGTGGTAAACTCACTACA 59.169 41.667 0.00 0.00 42.87 2.74
2487 2809 5.047943 AGCTACAGTGGTAAACTCACTACAG 60.048 44.000 0.00 0.00 42.87 2.74
2488 2810 5.278858 GCTACAGTGGTAAACTCACTACAGT 60.279 44.000 0.00 0.00 42.87 3.55
2489 2811 6.072286 GCTACAGTGGTAAACTCACTACAGTA 60.072 42.308 0.00 0.00 42.87 2.74
2490 2812 6.081872 ACAGTGGTAAACTCACTACAGTAC 57.918 41.667 0.00 0.00 42.87 2.73
2491 2813 5.832060 ACAGTGGTAAACTCACTACAGTACT 59.168 40.000 0.00 0.00 42.87 2.73
2492 2814 6.150318 CAGTGGTAAACTCACTACAGTACTG 58.850 44.000 21.44 21.44 42.87 2.74
2493 2815 5.243283 AGTGGTAAACTCACTACAGTACTGG 59.757 44.000 26.12 12.24 42.91 4.00
2494 2816 5.242393 GTGGTAAACTCACTACAGTACTGGA 59.758 44.000 26.12 17.96 30.81 3.86
2495 2817 5.834742 TGGTAAACTCACTACAGTACTGGAA 59.165 40.000 26.12 13.14 34.19 3.53
2496 2818 6.015688 TGGTAAACTCACTACAGTACTGGAAG 60.016 42.308 26.12 22.74 42.29 3.46
2497 2819 4.522722 AACTCACTACAGTACTGGAAGC 57.477 45.455 26.12 0.00 37.60 3.86
2498 2820 3.497332 ACTCACTACAGTACTGGAAGCA 58.503 45.455 26.12 12.08 37.60 3.91
2499 2821 3.895656 ACTCACTACAGTACTGGAAGCAA 59.104 43.478 26.12 12.98 37.60 3.91
2500 2822 4.528596 ACTCACTACAGTACTGGAAGCAAT 59.471 41.667 26.12 6.49 37.60 3.56
2501 2823 5.012148 ACTCACTACAGTACTGGAAGCAATT 59.988 40.000 26.12 5.75 37.60 2.32
2502 2824 5.865085 TCACTACAGTACTGGAAGCAATTT 58.135 37.500 26.12 5.03 37.60 1.82
2503 2825 6.999950 TCACTACAGTACTGGAAGCAATTTA 58.000 36.000 26.12 5.93 37.60 1.40
2504 2826 7.620880 TCACTACAGTACTGGAAGCAATTTAT 58.379 34.615 26.12 3.80 37.60 1.40
2505 2827 7.764443 TCACTACAGTACTGGAAGCAATTTATC 59.236 37.037 26.12 0.00 37.60 1.75
2506 2828 7.011482 CACTACAGTACTGGAAGCAATTTATCC 59.989 40.741 26.12 0.00 37.60 2.59
2507 2829 6.067217 ACAGTACTGGAAGCAATTTATCCT 57.933 37.500 26.12 0.00 37.60 3.24
2508 2830 6.116126 ACAGTACTGGAAGCAATTTATCCTC 58.884 40.000 26.12 0.00 37.60 3.71
2509 2831 6.115446 CAGTACTGGAAGCAATTTATCCTCA 58.885 40.000 15.49 0.00 37.60 3.86
2510 2832 6.769822 CAGTACTGGAAGCAATTTATCCTCAT 59.230 38.462 15.49 0.00 37.60 2.90
2511 2833 6.769822 AGTACTGGAAGCAATTTATCCTCATG 59.230 38.462 0.00 0.00 37.60 3.07
2512 2834 5.759059 ACTGGAAGCAATTTATCCTCATGA 58.241 37.500 0.00 0.00 37.60 3.07
2513 2835 5.591877 ACTGGAAGCAATTTATCCTCATGAC 59.408 40.000 0.00 0.00 37.60 3.06
2514 2836 4.889409 TGGAAGCAATTTATCCTCATGACC 59.111 41.667 0.00 0.00 34.24 4.02
2515 2837 4.279420 GGAAGCAATTTATCCTCATGACCC 59.721 45.833 0.00 0.00 0.00 4.46
2516 2838 4.524802 AGCAATTTATCCTCATGACCCA 57.475 40.909 0.00 0.00 0.00 4.51
2517 2839 4.467769 AGCAATTTATCCTCATGACCCAG 58.532 43.478 0.00 0.00 0.00 4.45
2518 2840 3.571401 GCAATTTATCCTCATGACCCAGG 59.429 47.826 0.00 0.00 0.00 4.45
2519 2841 3.515602 ATTTATCCTCATGACCCAGGC 57.484 47.619 0.00 0.00 0.00 4.85
2520 2842 1.140312 TTATCCTCATGACCCAGGCC 58.860 55.000 0.00 0.00 0.00 5.19
2521 2843 0.030195 TATCCTCATGACCCAGGCCA 60.030 55.000 5.01 0.00 0.00 5.36
2522 2844 0.700269 ATCCTCATGACCCAGGCCAT 60.700 55.000 5.01 0.00 0.00 4.40
2523 2845 1.152819 CCTCATGACCCAGGCCATG 60.153 63.158 5.01 6.64 40.97 3.66
2550 2872 3.890674 GCCTTGGGCTTGTCTACG 58.109 61.111 0.80 0.00 46.69 3.51
2551 2873 1.003718 GCCTTGGGCTTGTCTACGT 60.004 57.895 0.80 0.00 46.69 3.57
2552 2874 1.019805 GCCTTGGGCTTGTCTACGTC 61.020 60.000 0.00 0.00 46.69 4.34
2553 2875 0.391263 CCTTGGGCTTGTCTACGTCC 60.391 60.000 0.00 0.00 0.00 4.79
2554 2876 0.608640 CTTGGGCTTGTCTACGTCCT 59.391 55.000 0.00 0.00 0.00 3.85
2555 2877 0.320374 TTGGGCTTGTCTACGTCCTG 59.680 55.000 0.00 0.00 0.00 3.86
2556 2878 0.541063 TGGGCTTGTCTACGTCCTGA 60.541 55.000 0.00 0.00 0.00 3.86
2557 2879 0.824759 GGGCTTGTCTACGTCCTGAT 59.175 55.000 0.00 0.00 0.00 2.90
2558 2880 1.207329 GGGCTTGTCTACGTCCTGATT 59.793 52.381 0.00 0.00 0.00 2.57
2559 2881 2.271800 GGCTTGTCTACGTCCTGATTG 58.728 52.381 0.00 0.00 0.00 2.67
2560 2882 2.271800 GCTTGTCTACGTCCTGATTGG 58.728 52.381 0.00 0.00 37.10 3.16
2561 2883 2.094182 GCTTGTCTACGTCCTGATTGGA 60.094 50.000 0.00 0.00 43.86 3.53
2573 2895 5.011090 TCCTGATTGGAGATAAACGACTG 57.989 43.478 0.00 0.00 40.56 3.51
2574 2896 4.122776 CCTGATTGGAGATAAACGACTGG 58.877 47.826 0.00 0.00 38.35 4.00
2575 2897 4.383118 CCTGATTGGAGATAAACGACTGGT 60.383 45.833 0.00 0.00 38.35 4.00
2576 2898 4.755411 TGATTGGAGATAAACGACTGGTC 58.245 43.478 0.00 0.00 0.00 4.02
2585 2907 2.651361 CGACTGGTCGTGGAAGCT 59.349 61.111 14.05 0.00 46.99 3.74
2586 2908 1.734477 CGACTGGTCGTGGAAGCTG 60.734 63.158 14.05 0.00 46.99 4.24
2587 2909 1.666011 GACTGGTCGTGGAAGCTGA 59.334 57.895 0.00 0.00 0.00 4.26
2588 2910 0.667792 GACTGGTCGTGGAAGCTGAC 60.668 60.000 0.00 0.00 0.00 3.51
2589 2911 1.115930 ACTGGTCGTGGAAGCTGACT 61.116 55.000 0.00 0.00 33.21 3.41
2590 2912 0.888619 CTGGTCGTGGAAGCTGACTA 59.111 55.000 0.00 0.00 33.21 2.59
2591 2913 1.478510 CTGGTCGTGGAAGCTGACTAT 59.521 52.381 0.00 0.00 33.21 2.12
2592 2914 1.204704 TGGTCGTGGAAGCTGACTATG 59.795 52.381 0.00 0.00 33.21 2.23
2593 2915 1.471676 GGTCGTGGAAGCTGACTATGG 60.472 57.143 0.00 0.00 33.21 2.74
2594 2916 1.204941 GTCGTGGAAGCTGACTATGGT 59.795 52.381 0.00 0.00 0.00 3.55
2595 2917 2.426024 GTCGTGGAAGCTGACTATGGTA 59.574 50.000 0.00 0.00 0.00 3.25
2596 2918 3.068307 GTCGTGGAAGCTGACTATGGTAT 59.932 47.826 0.00 0.00 0.00 2.73
2597 2919 3.318275 TCGTGGAAGCTGACTATGGTATC 59.682 47.826 0.00 0.00 0.00 2.24
2598 2920 3.068165 CGTGGAAGCTGACTATGGTATCA 59.932 47.826 0.00 0.00 0.00 2.15
2599 2921 4.262207 CGTGGAAGCTGACTATGGTATCAT 60.262 45.833 0.00 0.00 37.40 2.45
2600 2922 5.233988 GTGGAAGCTGACTATGGTATCATC 58.766 45.833 0.00 0.00 34.96 2.92
2601 2923 5.011533 GTGGAAGCTGACTATGGTATCATCT 59.988 44.000 0.00 0.00 34.96 2.90
2602 2924 6.209589 GTGGAAGCTGACTATGGTATCATCTA 59.790 42.308 0.00 0.00 34.96 1.98
2603 2925 6.956435 TGGAAGCTGACTATGGTATCATCTAT 59.044 38.462 0.00 0.00 34.96 1.98
2604 2926 7.123397 TGGAAGCTGACTATGGTATCATCTATC 59.877 40.741 0.00 0.00 34.96 2.08
2605 2927 6.691754 AGCTGACTATGGTATCATCTATCG 57.308 41.667 0.00 0.00 34.96 2.92
2606 2928 6.418946 AGCTGACTATGGTATCATCTATCGA 58.581 40.000 0.00 0.00 34.96 3.59
2607 2929 7.059788 AGCTGACTATGGTATCATCTATCGAT 58.940 38.462 2.16 2.16 34.96 3.59
2608 2930 8.214364 AGCTGACTATGGTATCATCTATCGATA 58.786 37.037 4.78 4.78 34.96 2.92
2609 2931 9.008965 GCTGACTATGGTATCATCTATCGATAT 57.991 37.037 5.40 0.00 34.96 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 87 4.986587 TCCACGACAACCGACGCG 62.987 66.667 3.53 3.53 41.76 6.01
121 126 5.312120 ACAAGGATCTGTAGTTCTACACG 57.688 43.478 8.38 6.03 0.00 4.49
151 156 2.906897 CATACACCGCCATGGCCC 60.907 66.667 30.79 5.10 43.94 5.80
166 171 0.662619 CATATTTGCCGACCGTGCAT 59.337 50.000 0.00 0.00 38.76 3.96
204 226 2.741092 GCTTCCTGGTCACGGACA 59.259 61.111 6.41 0.00 33.68 4.02
238 260 4.175337 GCAGAGGGCATGCGGGTA 62.175 66.667 12.44 0.00 43.97 3.69
263 285 6.844097 AAGGCGAAAATACCCAAGAATTAA 57.156 33.333 0.00 0.00 0.00 1.40
266 288 4.526650 ACAAAGGCGAAAATACCCAAGAAT 59.473 37.500 0.00 0.00 0.00 2.40
302 324 0.932585 CACGGCAAAATCGTTGCGTT 60.933 50.000 5.08 0.00 45.78 4.84
317 339 0.446222 AAATCAATTCGGCGACACGG 59.554 50.000 10.16 0.00 0.00 4.94
318 340 2.241259 AAAATCAATTCGGCGACACG 57.759 45.000 10.16 0.00 0.00 4.49
319 341 2.588106 CGAAAAATCAATTCGGCGACAC 59.412 45.455 10.16 0.00 44.36 3.67
320 342 2.845486 CGAAAAATCAATTCGGCGACA 58.155 42.857 10.16 0.97 44.36 4.35
326 348 2.159572 ACTCGCCCGAAAAATCAATTCG 60.160 45.455 1.93 1.93 46.86 3.34
327 349 3.171277 CACTCGCCCGAAAAATCAATTC 58.829 45.455 0.00 0.00 0.00 2.17
328 350 2.556622 ACACTCGCCCGAAAAATCAATT 59.443 40.909 0.00 0.00 0.00 2.32
329 351 2.095263 CACACTCGCCCGAAAAATCAAT 60.095 45.455 0.00 0.00 0.00 2.57
330 352 1.265635 CACACTCGCCCGAAAAATCAA 59.734 47.619 0.00 0.00 0.00 2.57
344 366 0.749649 AGGATCCGAGCATCACACTC 59.250 55.000 5.98 0.00 33.17 3.51
345 367 0.749649 GAGGATCCGAGCATCACACT 59.250 55.000 5.98 0.00 33.17 3.55
346 368 3.280920 GAGGATCCGAGCATCACAC 57.719 57.895 5.98 0.00 33.17 3.82
358 380 0.676736 GACGGAGATGGTGGAGGATC 59.323 60.000 0.00 0.00 0.00 3.36
359 381 0.263172 AGACGGAGATGGTGGAGGAT 59.737 55.000 0.00 0.00 0.00 3.24
360 382 0.395862 GAGACGGAGATGGTGGAGGA 60.396 60.000 0.00 0.00 0.00 3.71
361 383 0.396417 AGAGACGGAGATGGTGGAGG 60.396 60.000 0.00 0.00 0.00 4.30
362 384 0.743688 CAGAGACGGAGATGGTGGAG 59.256 60.000 0.00 0.00 0.00 3.86
363 385 0.684479 CCAGAGACGGAGATGGTGGA 60.684 60.000 0.00 0.00 0.00 4.02
364 386 1.819229 CCAGAGACGGAGATGGTGG 59.181 63.158 0.00 0.00 0.00 4.61
365 387 1.142748 GCCAGAGACGGAGATGGTG 59.857 63.158 0.00 0.00 35.17 4.17
366 388 1.305297 TGCCAGAGACGGAGATGGT 60.305 57.895 0.00 0.00 35.17 3.55
367 389 1.440893 CTGCCAGAGACGGAGATGG 59.559 63.158 0.00 0.00 35.84 3.51
368 390 1.326213 ACCTGCCAGAGACGGAGATG 61.326 60.000 0.00 0.00 0.00 2.90
369 391 0.616111 AACCTGCCAGAGACGGAGAT 60.616 55.000 0.00 0.00 0.00 2.75
370 392 1.228894 AACCTGCCAGAGACGGAGA 60.229 57.895 0.00 0.00 0.00 3.71
371 393 1.216710 GAACCTGCCAGAGACGGAG 59.783 63.158 0.00 0.00 0.00 4.63
372 394 1.228894 AGAACCTGCCAGAGACGGA 60.229 57.895 0.00 0.00 0.00 4.69
373 395 1.216710 GAGAACCTGCCAGAGACGG 59.783 63.158 0.00 0.00 0.00 4.79
374 396 1.216710 GGAGAACCTGCCAGAGACG 59.783 63.158 0.00 0.00 0.00 4.18
375 397 2.677508 AGGAGAACCTGCCAGAGAC 58.322 57.895 0.00 0.00 45.92 3.36
392 414 2.331805 CGACGCATAGACCCGGAG 59.668 66.667 0.73 0.00 0.00 4.63
393 415 3.214123 CCGACGCATAGACCCGGA 61.214 66.667 0.73 0.00 42.49 5.14
394 416 4.944372 GCCGACGCATAGACCCGG 62.944 72.222 0.00 0.00 42.74 5.73
395 417 3.900892 AGCCGACGCATAGACCCG 61.901 66.667 0.00 0.00 37.52 5.28
396 418 2.279517 CAGCCGACGCATAGACCC 60.280 66.667 0.00 0.00 37.52 4.46
397 419 1.299468 CTCAGCCGACGCATAGACC 60.299 63.158 0.00 0.00 37.52 3.85
398 420 0.867753 CACTCAGCCGACGCATAGAC 60.868 60.000 0.00 0.00 37.52 2.59
399 421 1.029947 TCACTCAGCCGACGCATAGA 61.030 55.000 0.00 0.00 37.52 1.98
400 422 0.593518 CTCACTCAGCCGACGCATAG 60.594 60.000 0.00 0.00 37.52 2.23
401 423 1.433471 CTCACTCAGCCGACGCATA 59.567 57.895 0.00 0.00 37.52 3.14
402 424 2.182791 CTCACTCAGCCGACGCAT 59.817 61.111 0.00 0.00 37.52 4.73
403 425 4.056125 CCTCACTCAGCCGACGCA 62.056 66.667 0.00 0.00 37.52 5.24
404 426 4.803426 CCCTCACTCAGCCGACGC 62.803 72.222 0.00 0.00 0.00 5.19
405 427 2.549611 CTTCCCTCACTCAGCCGACG 62.550 65.000 0.00 0.00 0.00 5.12
406 428 1.216710 CTTCCCTCACTCAGCCGAC 59.783 63.158 0.00 0.00 0.00 4.79
407 429 0.541998 TTCTTCCCTCACTCAGCCGA 60.542 55.000 0.00 0.00 0.00 5.54
408 430 0.108424 CTTCTTCCCTCACTCAGCCG 60.108 60.000 0.00 0.00 0.00 5.52
409 431 1.206849 CTCTTCTTCCCTCACTCAGCC 59.793 57.143 0.00 0.00 0.00 4.85
410 432 2.166254 CTCTCTTCTTCCCTCACTCAGC 59.834 54.545 0.00 0.00 0.00 4.26
411 433 3.430453 ACTCTCTTCTTCCCTCACTCAG 58.570 50.000 0.00 0.00 0.00 3.35
412 434 3.534357 ACTCTCTTCTTCCCTCACTCA 57.466 47.619 0.00 0.00 0.00 3.41
416 438 2.655407 ACCCTACTCTCTTCTTCCCTCA 59.345 50.000 0.00 0.00 0.00 3.86
443 465 0.976073 TCCATCCCTTCGGTCTCCAC 60.976 60.000 0.00 0.00 0.00 4.02
453 475 4.228438 CCCTACTTTCTTCTTCCATCCCTT 59.772 45.833 0.00 0.00 0.00 3.95
478 500 1.469079 GCACTATTTCCGCGGCAAAAT 60.469 47.619 23.51 23.43 0.00 1.82
488 510 0.179468 TACCTGGCCGCACTATTTCC 59.821 55.000 0.00 0.00 0.00 3.13
489 511 1.296727 GTACCTGGCCGCACTATTTC 58.703 55.000 0.00 0.00 0.00 2.17
500 522 0.958876 CCCGGACTTTTGTACCTGGC 60.959 60.000 0.73 0.00 0.00 4.85
502 524 0.036306 AGCCCGGACTTTTGTACCTG 59.964 55.000 0.73 0.00 0.00 4.00
503 525 0.323957 GAGCCCGGACTTTTGTACCT 59.676 55.000 0.73 0.00 0.00 3.08
505 527 1.017701 CGGAGCCCGGACTTTTGTAC 61.018 60.000 0.73 0.00 44.15 2.90
522 544 1.873270 GCCCACCAAAAGTAAGGCGG 61.873 60.000 0.00 0.00 37.35 6.13
526 548 1.550072 CCCATGCCCACCAAAAGTAAG 59.450 52.381 0.00 0.00 0.00 2.34
530 552 1.536174 ACCCCATGCCCACCAAAAG 60.536 57.895 0.00 0.00 0.00 2.27
552 574 0.317160 CACAAGCCACGTAGGTCTCA 59.683 55.000 0.00 0.00 40.61 3.27
569 591 0.955919 CTTTTCCGGAGCCTGGACAC 60.956 60.000 3.34 0.00 34.56 3.67
588 610 2.926586 GCCGAAACAAAATCAAGGGAGC 60.927 50.000 0.00 0.00 0.00 4.70
590 612 2.593026 AGCCGAAACAAAATCAAGGGA 58.407 42.857 0.00 0.00 0.00 4.20
593 615 3.803778 AGCAAAGCCGAAACAAAATCAAG 59.196 39.130 0.00 0.00 0.00 3.02
595 617 3.122297 CAGCAAAGCCGAAACAAAATCA 58.878 40.909 0.00 0.00 0.00 2.57
597 619 3.451141 TCAGCAAAGCCGAAACAAAAT 57.549 38.095 0.00 0.00 0.00 1.82
598 620 2.949451 TCAGCAAAGCCGAAACAAAA 57.051 40.000 0.00 0.00 0.00 2.44
603 625 4.033817 CACAATTTTTCAGCAAAGCCGAAA 59.966 37.500 0.00 0.00 0.00 3.46
606 628 2.221517 CCACAATTTTTCAGCAAAGCCG 59.778 45.455 0.00 0.00 0.00 5.52
640 662 1.296392 CGCCTCCAATCAGTCCACA 59.704 57.895 0.00 0.00 0.00 4.17
642 664 1.918293 ACCGCCTCCAATCAGTCCA 60.918 57.895 0.00 0.00 0.00 4.02
647 669 1.303236 CCAACACCGCCTCCAATCA 60.303 57.895 0.00 0.00 0.00 2.57
656 678 3.316573 CTCCCTCCTCCAACACCGC 62.317 68.421 0.00 0.00 0.00 5.68
666 688 1.846439 CTCTCACTCTCTCTCCCTCCT 59.154 57.143 0.00 0.00 0.00 3.69
672 694 2.128771 AGGCACTCTCACTCTCTCTC 57.871 55.000 0.00 0.00 0.00 3.20
752 774 5.091910 AGTGTCGCAGTTTTAAACTAAGC 57.908 39.130 10.21 9.68 40.46 3.09
754 776 5.731126 GCCAAGTGTCGCAGTTTTAAACTAA 60.731 40.000 10.21 0.00 40.46 2.24
769 791 0.605319 TGATCCAACGGCCAAGTGTC 60.605 55.000 2.24 0.00 0.00 3.67
789 811 1.649321 TGCTCTCCACCAACAGATCT 58.351 50.000 0.00 0.00 0.00 2.75
797 819 1.228245 GCCACTTTGCTCTCCACCA 60.228 57.895 0.00 0.00 0.00 4.17
799 821 0.250467 TCAGCCACTTTGCTCTCCAC 60.250 55.000 0.00 0.00 40.32 4.02
872 894 2.606725 GTGAATGATGGAGAGAAGCACG 59.393 50.000 0.00 0.00 0.00 5.34
934 956 5.297527 TGAGCCAACGATCGTTATAACTAGA 59.702 40.000 31.27 13.56 36.46 2.43
961 983 7.682628 AGGTTTGGTGTACTTGCTAGTAATAA 58.317 34.615 9.66 1.19 38.55 1.40
962 984 7.248743 AGGTTTGGTGTACTTGCTAGTAATA 57.751 36.000 9.66 0.01 38.55 0.98
963 985 6.123045 AGGTTTGGTGTACTTGCTAGTAAT 57.877 37.500 9.66 0.00 38.55 1.89
985 1007 3.378427 TCGGCCATCTGATATCGATGTAG 59.622 47.826 23.61 17.66 37.22 2.74
994 1016 1.475169 CCCTGCTCGGCCATCTGATA 61.475 60.000 2.24 0.00 0.00 2.15
1016 1038 1.007271 CACCAGCTCGTCGTCTTGT 60.007 57.895 0.00 0.00 0.00 3.16
1071 1093 2.380410 GGTGACCACGCACGCTAAG 61.380 63.158 0.00 0.00 39.66 2.18
1223 1245 0.390472 CCTGAGGACGAACTTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
1432 1470 1.392710 CGCATCGGTAGGTCCTCCTT 61.393 60.000 0.00 0.00 42.12 3.36
1621 1680 0.884704 TCCAACTTGTCGAAGCAGGC 60.885 55.000 0.00 0.00 31.68 4.85
1718 1777 3.494398 GCATGTACCACACCCATACCTAG 60.494 52.174 0.00 0.00 0.00 3.02
1720 1779 1.211949 GCATGTACCACACCCATACCT 59.788 52.381 0.00 0.00 0.00 3.08
1721 1780 1.675552 GCATGTACCACACCCATACC 58.324 55.000 0.00 0.00 0.00 2.73
1722 1781 1.211949 AGGCATGTACCACACCCATAC 59.788 52.381 0.00 0.00 0.00 2.39
1723 1782 1.488812 GAGGCATGTACCACACCCATA 59.511 52.381 0.00 0.00 0.00 2.74
1724 1783 0.255890 GAGGCATGTACCACACCCAT 59.744 55.000 0.00 0.00 0.00 4.00
1725 1784 0.840288 AGAGGCATGTACCACACCCA 60.840 55.000 0.00 0.00 0.00 4.51
1726 1785 1.139058 CTAGAGGCATGTACCACACCC 59.861 57.143 0.00 0.00 0.00 4.61
1766 1825 2.942879 GCATCAAACGTGCACGGA 59.057 55.556 39.21 27.88 44.95 4.69
1785 1844 2.032054 GCGCAAATACTCAGCATAGCAA 59.968 45.455 0.30 0.00 0.00 3.91
1926 2019 4.501743 GCACTAAGAGTAGGTAATCCCTGC 60.502 50.000 0.00 0.00 45.81 4.85
1927 2020 4.896482 AGCACTAAGAGTAGGTAATCCCTG 59.104 45.833 0.00 0.00 45.81 4.45
1929 2022 5.873146 AAGCACTAAGAGTAGGTAATCCC 57.127 43.478 0.00 0.00 0.00 3.85
1930 2023 7.385478 GCAATAAGCACTAAGAGTAGGTAATCC 59.615 40.741 0.00 0.00 44.79 3.01
1931 2024 8.300495 GCAATAAGCACTAAGAGTAGGTAATC 57.700 38.462 0.00 0.00 44.79 1.75
1946 2039 7.573843 ACAATAGTTGTTCTCTGCAATAAGCAC 60.574 37.037 0.00 0.00 45.32 4.40
1948 2041 6.846350 ACAATAGTTGTTCTCTGCAATAAGC 58.154 36.000 0.00 0.00 42.22 3.09
1949 2042 7.119699 TGGACAATAGTTGTTCTCTGCAATAAG 59.880 37.037 3.07 0.00 45.52 1.73
1950 2043 6.939730 TGGACAATAGTTGTTCTCTGCAATAA 59.060 34.615 3.07 0.00 45.52 1.40
1951 2044 6.472016 TGGACAATAGTTGTTCTCTGCAATA 58.528 36.000 3.07 0.00 45.52 1.90
1952 2045 5.316167 TGGACAATAGTTGTTCTCTGCAAT 58.684 37.500 3.07 0.00 45.52 3.56
1953 2046 4.713553 TGGACAATAGTTGTTCTCTGCAA 58.286 39.130 3.07 0.00 45.52 4.08
1954 2047 4.350368 TGGACAATAGTTGTTCTCTGCA 57.650 40.909 3.07 0.00 45.52 4.41
1955 2048 5.886960 ATTGGACAATAGTTGTTCTCTGC 57.113 39.130 3.07 0.00 45.52 4.26
1956 2049 7.115378 GCAAAATTGGACAATAGTTGTTCTCTG 59.885 37.037 16.34 0.82 45.52 3.35
1957 2050 7.147976 GCAAAATTGGACAATAGTTGTTCTCT 58.852 34.615 16.34 0.00 45.52 3.10
1958 2051 6.922957 TGCAAAATTGGACAATAGTTGTTCTC 59.077 34.615 16.34 6.55 45.52 2.87
1959 2052 6.815089 TGCAAAATTGGACAATAGTTGTTCT 58.185 32.000 16.34 0.00 45.52 3.01
1960 2053 7.010923 TGTTGCAAAATTGGACAATAGTTGTTC 59.989 33.333 0.00 0.00 45.52 3.18
1961 2054 6.820656 TGTTGCAAAATTGGACAATAGTTGTT 59.179 30.769 0.00 0.40 45.52 2.83
1963 2056 6.841443 TGTTGCAAAATTGGACAATAGTTG 57.159 33.333 0.00 13.12 33.00 3.16
1964 2057 6.482973 CCTTGTTGCAAAATTGGACAATAGTT 59.517 34.615 0.00 0.00 0.00 2.24
1965 2058 5.990996 CCTTGTTGCAAAATTGGACAATAGT 59.009 36.000 0.00 0.00 0.00 2.12
1966 2059 5.990996 ACCTTGTTGCAAAATTGGACAATAG 59.009 36.000 14.03 5.41 0.00 1.73
1967 2060 5.923204 ACCTTGTTGCAAAATTGGACAATA 58.077 33.333 14.03 0.00 0.00 1.90
1968 2061 4.779696 ACCTTGTTGCAAAATTGGACAAT 58.220 34.783 14.03 0.00 0.00 2.71
1969 2062 4.213564 ACCTTGTTGCAAAATTGGACAA 57.786 36.364 14.03 6.88 0.00 3.18
1970 2063 3.902881 ACCTTGTTGCAAAATTGGACA 57.097 38.095 14.03 0.00 0.00 4.02
1971 2064 6.670077 TTAAACCTTGTTGCAAAATTGGAC 57.330 33.333 14.03 0.00 0.00 4.02
1972 2065 6.484977 GGATTAAACCTTGTTGCAAAATTGGA 59.515 34.615 14.03 0.00 0.00 3.53
1973 2066 6.261826 TGGATTAAACCTTGTTGCAAAATTGG 59.738 34.615 0.00 4.06 0.00 3.16
1974 2067 7.256756 TGGATTAAACCTTGTTGCAAAATTG 57.743 32.000 0.00 0.00 0.00 2.32
1975 2068 7.466590 CGTTGGATTAAACCTTGTTGCAAAATT 60.467 33.333 0.00 0.00 0.00 1.82
1976 2069 6.018343 CGTTGGATTAAACCTTGTTGCAAAAT 60.018 34.615 0.00 0.00 0.00 1.82
1977 2070 5.292101 CGTTGGATTAAACCTTGTTGCAAAA 59.708 36.000 0.00 0.00 0.00 2.44
1978 2071 4.806247 CGTTGGATTAAACCTTGTTGCAAA 59.194 37.500 0.00 0.00 0.00 3.68
2072 2390 8.134895 GCCGACAAAATATGATTTTTAGGATGA 58.865 33.333 11.15 0.00 0.00 2.92
2096 2414 8.597227 GGTAAACGTTGGATTAAATATTTTGCC 58.403 33.333 5.91 6.39 0.00 4.52
2109 2427 5.553123 TGTCTATTGTGGTAAACGTTGGAT 58.447 37.500 0.00 0.00 0.00 3.41
2111 2429 5.467399 TCTTGTCTATTGTGGTAAACGTTGG 59.533 40.000 0.00 0.00 0.00 3.77
2112 2430 6.202188 ACTCTTGTCTATTGTGGTAAACGTTG 59.798 38.462 0.00 0.00 0.00 4.10
2113 2431 6.285990 ACTCTTGTCTATTGTGGTAAACGTT 58.714 36.000 0.00 0.00 0.00 3.99
2115 2433 6.780706 AACTCTTGTCTATTGTGGTAAACG 57.219 37.500 0.00 0.00 0.00 3.60
2116 2434 9.233232 CAAAAACTCTTGTCTATTGTGGTAAAC 57.767 33.333 0.00 0.00 0.00 2.01
2117 2435 8.962679 ACAAAAACTCTTGTCTATTGTGGTAAA 58.037 29.630 0.00 0.00 34.37 2.01
2118 2436 8.514330 ACAAAAACTCTTGTCTATTGTGGTAA 57.486 30.769 0.00 0.00 34.37 2.85
2120 2438 7.404671 AACAAAAACTCTTGTCTATTGTGGT 57.595 32.000 0.00 0.00 38.59 4.16
2121 2439 8.594687 CAAAACAAAAACTCTTGTCTATTGTGG 58.405 33.333 0.00 0.00 38.59 4.17
2122 2440 8.110002 GCAAAACAAAAACTCTTGTCTATTGTG 58.890 33.333 0.00 0.00 38.59 3.33
2123 2441 7.816995 TGCAAAACAAAAACTCTTGTCTATTGT 59.183 29.630 0.00 0.00 38.59 2.71
2124 2442 8.183830 TGCAAAACAAAAACTCTTGTCTATTG 57.816 30.769 0.00 0.00 38.59 1.90
2126 2444 7.816995 TGTTGCAAAACAAAAACTCTTGTCTAT 59.183 29.630 0.00 0.00 40.82 1.98
2130 2448 6.610741 TTGTTGCAAAACAAAAACTCTTGT 57.389 29.167 0.00 0.00 40.82 3.16
2131 2449 7.691877 GGTATTGTTGCAAAACAAAAACTCTTG 59.308 33.333 7.98 0.00 44.70 3.02
2132 2450 7.389053 TGGTATTGTTGCAAAACAAAAACTCTT 59.611 29.630 7.98 0.00 44.70 2.85
2133 2451 6.876257 TGGTATTGTTGCAAAACAAAAACTCT 59.124 30.769 7.98 0.00 44.70 3.24
2190 2512 7.192676 GCGTGTAGCTAACAATTGTTTAATG 57.807 36.000 27.66 16.19 40.63 1.90
2293 2615 2.238646 TCTGACGGGTGGCAGAATTAAT 59.761 45.455 0.00 0.00 38.14 1.40
2317 2639 7.600093 TCCATCATTTAGGGGGATGAAAATTA 58.400 34.615 0.00 0.00 40.61 1.40
2318 2640 6.451714 TCCATCATTTAGGGGGATGAAAATT 58.548 36.000 0.00 0.00 40.61 1.82
2319 2641 6.041910 TCCATCATTTAGGGGGATGAAAAT 57.958 37.500 0.00 0.00 40.61 1.82
2320 2642 5.480058 TCCATCATTTAGGGGGATGAAAA 57.520 39.130 0.00 0.00 40.61 2.29
2321 2643 5.684853 ATCCATCATTTAGGGGGATGAAA 57.315 39.130 0.00 0.00 40.61 2.69
2322 2644 5.684853 AATCCATCATTTAGGGGGATGAA 57.315 39.130 0.00 0.00 40.61 2.57
2323 2645 6.012508 GTCTAATCCATCATTTAGGGGGATGA 60.013 42.308 0.00 0.00 40.61 2.92
2324 2646 6.183347 GTCTAATCCATCATTTAGGGGGATG 58.817 44.000 0.00 0.00 38.33 3.51
2325 2647 5.254032 GGTCTAATCCATCATTTAGGGGGAT 59.746 44.000 0.00 0.00 39.97 3.85
2326 2648 4.601857 GGTCTAATCCATCATTTAGGGGGA 59.398 45.833 0.00 0.00 0.00 4.81
2327 2649 4.603610 AGGTCTAATCCATCATTTAGGGGG 59.396 45.833 0.00 0.00 0.00 5.40
2328 2650 5.515534 CCAGGTCTAATCCATCATTTAGGGG 60.516 48.000 0.00 0.00 0.00 4.79
2329 2651 5.073691 ACCAGGTCTAATCCATCATTTAGGG 59.926 44.000 0.00 0.00 0.00 3.53
2330 2652 6.192970 ACCAGGTCTAATCCATCATTTAGG 57.807 41.667 0.00 0.00 0.00 2.69
2331 2653 6.016777 GCAACCAGGTCTAATCCATCATTTAG 60.017 42.308 0.00 0.00 0.00 1.85
2332 2654 5.827797 GCAACCAGGTCTAATCCATCATTTA 59.172 40.000 0.00 0.00 0.00 1.40
2333 2655 4.646492 GCAACCAGGTCTAATCCATCATTT 59.354 41.667 0.00 0.00 0.00 2.32
2334 2656 4.210331 GCAACCAGGTCTAATCCATCATT 58.790 43.478 0.00 0.00 0.00 2.57
2335 2657 3.202818 TGCAACCAGGTCTAATCCATCAT 59.797 43.478 0.00 0.00 0.00 2.45
2336 2658 2.575735 TGCAACCAGGTCTAATCCATCA 59.424 45.455 0.00 0.00 0.00 3.07
2337 2659 2.945668 GTGCAACCAGGTCTAATCCATC 59.054 50.000 0.00 0.00 0.00 3.51
2338 2660 2.680805 CGTGCAACCAGGTCTAATCCAT 60.681 50.000 0.00 0.00 0.00 3.41
2339 2661 1.338674 CGTGCAACCAGGTCTAATCCA 60.339 52.381 0.00 0.00 0.00 3.41
2340 2662 1.066430 TCGTGCAACCAGGTCTAATCC 60.066 52.381 0.00 0.00 0.00 3.01
2341 2663 2.380084 TCGTGCAACCAGGTCTAATC 57.620 50.000 0.00 0.00 0.00 1.75
2342 2664 2.851263 TTCGTGCAACCAGGTCTAAT 57.149 45.000 0.00 0.00 0.00 1.73
2343 2665 2.623878 TTTCGTGCAACCAGGTCTAA 57.376 45.000 0.00 0.00 0.00 2.10
2344 2666 2.851263 ATTTCGTGCAACCAGGTCTA 57.149 45.000 0.00 0.00 0.00 2.59
2345 2667 2.038557 ACTATTTCGTGCAACCAGGTCT 59.961 45.455 0.00 0.00 0.00 3.85
2346 2668 2.423577 ACTATTTCGTGCAACCAGGTC 58.576 47.619 0.00 0.00 0.00 3.85
2347 2669 2.561478 ACTATTTCGTGCAACCAGGT 57.439 45.000 0.00 0.00 0.00 4.00
2348 2670 3.596214 ACTACTATTTCGTGCAACCAGG 58.404 45.455 0.00 0.00 0.00 4.45
2349 2671 4.242475 TGACTACTATTTCGTGCAACCAG 58.758 43.478 0.00 0.00 0.00 4.00
2350 2672 4.021807 TCTGACTACTATTTCGTGCAACCA 60.022 41.667 0.00 0.00 0.00 3.67
2351 2673 4.326548 GTCTGACTACTATTTCGTGCAACC 59.673 45.833 0.00 0.00 0.00 3.77
2352 2674 5.162075 AGTCTGACTACTATTTCGTGCAAC 58.838 41.667 8.91 0.00 0.00 4.17
2353 2675 5.386958 AGTCTGACTACTATTTCGTGCAA 57.613 39.130 8.91 0.00 0.00 4.08
2354 2676 6.505044 TTAGTCTGACTACTATTTCGTGCA 57.495 37.500 16.74 0.00 32.16 4.57
2355 2677 7.167801 GGATTTAGTCTGACTACTATTTCGTGC 59.832 40.741 16.74 2.20 32.16 5.34
2356 2678 7.648510 GGGATTTAGTCTGACTACTATTTCGTG 59.351 40.741 16.74 0.00 32.16 4.35
2357 2679 7.341256 TGGGATTTAGTCTGACTACTATTTCGT 59.659 37.037 16.74 0.00 32.16 3.85
2358 2680 7.713750 TGGGATTTAGTCTGACTACTATTTCG 58.286 38.462 16.74 0.00 32.16 3.46
2364 2686 8.432805 CCAATAATGGGATTTAGTCTGACTACT 58.567 37.037 16.74 7.78 43.51 2.57
2365 2687 8.608844 CCAATAATGGGATTTAGTCTGACTAC 57.391 38.462 16.74 6.25 43.51 2.73
2374 2696 9.299397 GGCTGACCAACCAATAATGGGATTTAG 62.299 44.444 0.98 0.00 43.27 1.85
2375 2697 7.592923 GGCTGACCAACCAATAATGGGATTTA 61.593 42.308 0.98 0.00 43.27 1.40
2376 2698 6.861439 GGCTGACCAACCAATAATGGGATTT 61.861 44.000 0.98 0.00 43.27 2.17
2377 2699 5.422645 GGCTGACCAACCAATAATGGGATT 61.423 45.833 0.98 0.00 43.27 3.01
2378 2700 3.945520 GGCTGACCAACCAATAATGGGAT 60.946 47.826 0.98 0.00 43.27 3.85
2379 2701 2.622977 GGCTGACCAACCAATAATGGGA 60.623 50.000 0.98 0.00 43.27 4.37
2380 2702 1.756538 GGCTGACCAACCAATAATGGG 59.243 52.381 0.98 0.00 43.27 4.00
2400 2722 2.271800 GCCACGAGTCTCCAATAGTTG 58.728 52.381 0.00 0.00 0.00 3.16
2401 2723 1.207329 GGCCACGAGTCTCCAATAGTT 59.793 52.381 0.00 0.00 0.00 2.24
2402 2724 0.824759 GGCCACGAGTCTCCAATAGT 59.175 55.000 0.00 0.00 0.00 2.12
2403 2725 0.824109 TGGCCACGAGTCTCCAATAG 59.176 55.000 0.00 0.00 0.00 1.73
2404 2726 0.824109 CTGGCCACGAGTCTCCAATA 59.176 55.000 0.00 0.00 0.00 1.90
2405 2727 1.599047 CTGGCCACGAGTCTCCAAT 59.401 57.895 0.00 0.00 0.00 3.16
2406 2728 2.583441 CCTGGCCACGAGTCTCCAA 61.583 63.158 0.00 0.00 0.00 3.53
2407 2729 2.805313 ATCCTGGCCACGAGTCTCCA 62.805 60.000 0.00 0.00 0.00 3.86
2408 2730 1.617947 AATCCTGGCCACGAGTCTCC 61.618 60.000 0.00 0.00 0.00 3.71
2409 2731 0.460987 CAATCCTGGCCACGAGTCTC 60.461 60.000 0.00 0.00 0.00 3.36
2410 2732 1.194781 ACAATCCTGGCCACGAGTCT 61.195 55.000 0.00 0.00 0.00 3.24
2411 2733 1.021390 CACAATCCTGGCCACGAGTC 61.021 60.000 0.00 0.00 0.00 3.36
2412 2734 1.003355 CACAATCCTGGCCACGAGT 60.003 57.895 0.00 0.00 0.00 4.18
2413 2735 2.401766 GCACAATCCTGGCCACGAG 61.402 63.158 0.00 0.00 0.00 4.18
2414 2736 1.549243 TAGCACAATCCTGGCCACGA 61.549 55.000 0.00 3.41 0.00 4.35
2415 2737 0.676466 TTAGCACAATCCTGGCCACG 60.676 55.000 0.00 0.00 0.00 4.94
2416 2738 1.098050 CTTAGCACAATCCTGGCCAC 58.902 55.000 0.00 0.00 0.00 5.01
2417 2739 0.680921 GCTTAGCACAATCCTGGCCA 60.681 55.000 4.71 4.71 0.00 5.36
2418 2740 0.680921 TGCTTAGCACAATCCTGGCC 60.681 55.000 1.39 0.00 31.71 5.36
2419 2741 1.336125 GATGCTTAGCACAATCCTGGC 59.664 52.381 9.82 0.00 43.04 4.85
2420 2742 1.600957 CGATGCTTAGCACAATCCTGG 59.399 52.381 9.82 0.00 43.04 4.45
2421 2743 1.600957 CCGATGCTTAGCACAATCCTG 59.399 52.381 9.82 0.00 43.04 3.86
2422 2744 1.475751 CCCGATGCTTAGCACAATCCT 60.476 52.381 9.82 0.00 43.04 3.24
2423 2745 0.947244 CCCGATGCTTAGCACAATCC 59.053 55.000 9.82 0.00 43.04 3.01
2424 2746 0.308993 GCCCGATGCTTAGCACAATC 59.691 55.000 9.82 2.24 43.04 2.67
2425 2747 0.394216 TGCCCGATGCTTAGCACAAT 60.394 50.000 9.82 0.00 43.04 2.71
2426 2748 0.607762 TTGCCCGATGCTTAGCACAA 60.608 50.000 9.82 6.05 43.04 3.33
2427 2749 1.002746 TTGCCCGATGCTTAGCACA 60.003 52.632 9.82 0.00 43.04 4.57
2428 2750 1.026718 ACTTGCCCGATGCTTAGCAC 61.027 55.000 9.82 2.80 43.04 4.40
2429 2751 0.744414 GACTTGCCCGATGCTTAGCA 60.744 55.000 10.09 10.09 44.86 3.49
2430 2752 0.462759 AGACTTGCCCGATGCTTAGC 60.463 55.000 0.00 0.00 42.00 3.09
2431 2753 1.667724 CAAGACTTGCCCGATGCTTAG 59.332 52.381 1.43 0.00 42.00 2.18
2432 2754 1.678728 CCAAGACTTGCCCGATGCTTA 60.679 52.381 9.85 0.00 42.00 3.09
2433 2755 0.962356 CCAAGACTTGCCCGATGCTT 60.962 55.000 9.85 0.00 42.00 3.91
2434 2756 1.377725 CCAAGACTTGCCCGATGCT 60.378 57.895 9.85 0.00 42.00 3.79
2435 2757 2.409870 CCCAAGACTTGCCCGATGC 61.410 63.158 9.85 0.00 41.77 3.91
2436 2758 2.409870 GCCCAAGACTTGCCCGATG 61.410 63.158 9.85 0.00 0.00 3.84
2437 2759 2.044946 GCCCAAGACTTGCCCGAT 60.045 61.111 9.85 0.00 0.00 4.18
2438 2760 4.344865 GGCCCAAGACTTGCCCGA 62.345 66.667 9.85 0.00 39.30 5.14
2439 2761 4.659172 TGGCCCAAGACTTGCCCG 62.659 66.667 9.85 0.70 44.72 6.13
2440 2762 1.836604 TTTGGCCCAAGACTTGCCC 60.837 57.895 9.85 11.97 44.72 5.36
2441 2763 1.367471 GTTTGGCCCAAGACTTGCC 59.633 57.895 9.85 9.47 45.56 4.52
2442 2764 0.249447 GTGTTTGGCCCAAGACTTGC 60.249 55.000 9.85 0.00 0.00 4.01
2443 2765 1.402787 AGTGTTTGGCCCAAGACTTG 58.597 50.000 13.11 8.31 0.00 3.16
2444 2766 2.863809 CTAGTGTTTGGCCCAAGACTT 58.136 47.619 22.36 8.82 0.00 3.01
2445 2767 1.545651 GCTAGTGTTTGGCCCAAGACT 60.546 52.381 21.17 21.17 0.00 3.24
2446 2768 0.881796 GCTAGTGTTTGGCCCAAGAC 59.118 55.000 8.69 8.69 0.00 3.01
2447 2769 0.771127 AGCTAGTGTTTGGCCCAAGA 59.229 50.000 0.00 0.00 0.00 3.02
2448 2770 2.084546 GTAGCTAGTGTTTGGCCCAAG 58.915 52.381 0.00 0.00 0.00 3.61
2449 2771 1.422024 TGTAGCTAGTGTTTGGCCCAA 59.578 47.619 0.00 0.00 0.00 4.12
2450 2772 1.003118 CTGTAGCTAGTGTTTGGCCCA 59.997 52.381 0.00 0.00 0.00 5.36
2451 2773 1.003233 ACTGTAGCTAGTGTTTGGCCC 59.997 52.381 0.00 0.00 0.00 5.80
2452 2774 2.076863 CACTGTAGCTAGTGTTTGGCC 58.923 52.381 8.27 0.00 42.38 5.36
2453 2775 2.076863 CCACTGTAGCTAGTGTTTGGC 58.923 52.381 14.15 0.00 45.12 4.52
2454 2776 3.402628 ACCACTGTAGCTAGTGTTTGG 57.597 47.619 14.15 9.67 45.12 3.28
2455 2777 5.989777 AGTTTACCACTGTAGCTAGTGTTTG 59.010 40.000 14.15 3.58 45.12 2.93
2456 2778 6.170846 AGTTTACCACTGTAGCTAGTGTTT 57.829 37.500 14.15 4.99 45.12 2.83
2457 2779 5.303589 TGAGTTTACCACTGTAGCTAGTGTT 59.696 40.000 14.15 4.20 45.12 3.32
2458 2780 4.831155 TGAGTTTACCACTGTAGCTAGTGT 59.169 41.667 14.15 4.60 45.12 3.55
2459 2781 5.047943 AGTGAGTTTACCACTGTAGCTAGTG 60.048 44.000 9.34 9.34 45.93 2.74
2460 2782 5.078256 AGTGAGTTTACCACTGTAGCTAGT 58.922 41.667 0.00 0.00 42.68 2.57
2461 2783 5.646577 AGTGAGTTTACCACTGTAGCTAG 57.353 43.478 0.00 0.00 42.68 3.42
2462 2784 6.005823 TGTAGTGAGTTTACCACTGTAGCTA 58.994 40.000 0.00 0.00 43.90 3.32
2463 2785 4.831155 TGTAGTGAGTTTACCACTGTAGCT 59.169 41.667 0.00 0.00 43.90 3.32
2464 2786 5.130292 TGTAGTGAGTTTACCACTGTAGC 57.870 43.478 0.00 0.00 43.90 3.58
2465 2787 6.328641 ACTGTAGTGAGTTTACCACTGTAG 57.671 41.667 0.00 0.00 43.90 2.74
2466 2788 7.000472 AGTACTGTAGTGAGTTTACCACTGTA 59.000 38.462 0.00 0.00 43.90 2.74
2467 2789 5.832060 AGTACTGTAGTGAGTTTACCACTGT 59.168 40.000 0.00 0.00 43.90 3.55
2468 2790 6.150318 CAGTACTGTAGTGAGTTTACCACTG 58.850 44.000 15.06 1.00 43.90 3.66
2469 2791 5.243283 CCAGTACTGTAGTGAGTTTACCACT 59.757 44.000 21.18 0.00 45.75 4.00
2470 2792 5.242393 TCCAGTACTGTAGTGAGTTTACCAC 59.758 44.000 21.18 0.00 34.89 4.16
2471 2793 5.387788 TCCAGTACTGTAGTGAGTTTACCA 58.612 41.667 21.18 0.00 0.00 3.25
2472 2794 5.972107 TCCAGTACTGTAGTGAGTTTACC 57.028 43.478 21.18 0.00 0.00 2.85
2473 2795 5.862860 GCTTCCAGTACTGTAGTGAGTTTAC 59.137 44.000 21.18 4.92 0.00 2.01
2474 2796 5.537295 TGCTTCCAGTACTGTAGTGAGTTTA 59.463 40.000 21.18 4.95 0.00 2.01
2475 2797 4.344102 TGCTTCCAGTACTGTAGTGAGTTT 59.656 41.667 21.18 0.00 0.00 2.66
2476 2798 3.895656 TGCTTCCAGTACTGTAGTGAGTT 59.104 43.478 21.18 0.00 0.00 3.01
2477 2799 3.497332 TGCTTCCAGTACTGTAGTGAGT 58.503 45.455 21.18 0.00 0.00 3.41
2478 2800 4.521130 TTGCTTCCAGTACTGTAGTGAG 57.479 45.455 21.18 13.56 0.00 3.51
2479 2801 5.483685 AATTGCTTCCAGTACTGTAGTGA 57.516 39.130 21.18 8.65 0.00 3.41
2480 2802 7.011482 GGATAAATTGCTTCCAGTACTGTAGTG 59.989 40.741 21.18 14.38 0.00 2.74
2481 2803 7.048512 GGATAAATTGCTTCCAGTACTGTAGT 58.951 38.462 21.18 5.18 0.00 2.73
2482 2804 7.275920 AGGATAAATTGCTTCCAGTACTGTAG 58.724 38.462 21.18 17.51 31.65 2.74
2483 2805 7.093068 TGAGGATAAATTGCTTCCAGTACTGTA 60.093 37.037 21.18 2.56 31.65 2.74
2484 2806 6.067217 AGGATAAATTGCTTCCAGTACTGT 57.933 37.500 21.18 2.28 31.65 3.55
2485 2807 6.115446 TGAGGATAAATTGCTTCCAGTACTG 58.885 40.000 16.34 16.34 31.65 2.74
2486 2808 6.313519 TGAGGATAAATTGCTTCCAGTACT 57.686 37.500 0.00 0.00 31.65 2.73
2487 2809 6.767902 TCATGAGGATAAATTGCTTCCAGTAC 59.232 38.462 0.00 0.00 31.65 2.73
2488 2810 6.767902 GTCATGAGGATAAATTGCTTCCAGTA 59.232 38.462 0.00 0.00 31.65 2.74
2489 2811 5.591877 GTCATGAGGATAAATTGCTTCCAGT 59.408 40.000 0.00 0.00 31.65 4.00
2490 2812 5.009410 GGTCATGAGGATAAATTGCTTCCAG 59.991 44.000 0.00 0.00 31.65 3.86
2491 2813 4.889409 GGTCATGAGGATAAATTGCTTCCA 59.111 41.667 0.00 0.00 31.65 3.53
2492 2814 4.279420 GGGTCATGAGGATAAATTGCTTCC 59.721 45.833 0.00 0.00 0.00 3.46
2493 2815 4.889409 TGGGTCATGAGGATAAATTGCTTC 59.111 41.667 0.00 0.00 0.00 3.86
2494 2816 4.870636 TGGGTCATGAGGATAAATTGCTT 58.129 39.130 0.00 0.00 0.00 3.91
2495 2817 4.467769 CTGGGTCATGAGGATAAATTGCT 58.532 43.478 0.00 0.00 0.00 3.91
2496 2818 3.571401 CCTGGGTCATGAGGATAAATTGC 59.429 47.826 0.00 0.00 0.00 3.56
2497 2819 3.571401 GCCTGGGTCATGAGGATAAATTG 59.429 47.826 0.00 0.00 0.00 2.32
2498 2820 3.437052 GGCCTGGGTCATGAGGATAAATT 60.437 47.826 0.00 0.00 0.00 1.82
2499 2821 2.108952 GGCCTGGGTCATGAGGATAAAT 59.891 50.000 0.00 0.00 0.00 1.40
2500 2822 1.494721 GGCCTGGGTCATGAGGATAAA 59.505 52.381 0.00 0.00 0.00 1.40
2501 2823 1.140312 GGCCTGGGTCATGAGGATAA 58.860 55.000 0.00 0.00 0.00 1.75
2502 2824 0.030195 TGGCCTGGGTCATGAGGATA 60.030 55.000 3.32 0.00 0.00 2.59
2503 2825 0.700269 ATGGCCTGGGTCATGAGGAT 60.700 55.000 3.32 0.00 39.19 3.24
2504 2826 1.308128 ATGGCCTGGGTCATGAGGA 60.308 57.895 3.32 0.00 39.19 3.71
2505 2827 3.339042 ATGGCCTGGGTCATGAGG 58.661 61.111 3.32 0.00 39.19 3.86
2534 2856 0.391263 GGACGTAGACAAGCCCAAGG 60.391 60.000 0.00 0.00 0.00 3.61
2535 2857 0.608640 AGGACGTAGACAAGCCCAAG 59.391 55.000 0.00 0.00 0.00 3.61
2536 2858 0.320374 CAGGACGTAGACAAGCCCAA 59.680 55.000 0.00 0.00 0.00 4.12
2537 2859 0.541063 TCAGGACGTAGACAAGCCCA 60.541 55.000 0.00 0.00 0.00 5.36
2538 2860 0.824759 ATCAGGACGTAGACAAGCCC 59.175 55.000 0.00 0.00 0.00 5.19
2539 2861 2.271800 CAATCAGGACGTAGACAAGCC 58.728 52.381 0.00 0.00 0.00 4.35
2540 2862 2.094182 TCCAATCAGGACGTAGACAAGC 60.094 50.000 0.00 0.00 43.07 4.01
2541 2863 3.444034 TCTCCAATCAGGACGTAGACAAG 59.556 47.826 0.00 0.00 43.07 3.16
2542 2864 3.427573 TCTCCAATCAGGACGTAGACAA 58.572 45.455 0.00 0.00 43.07 3.18
2543 2865 3.081710 TCTCCAATCAGGACGTAGACA 57.918 47.619 0.00 0.00 43.07 3.41
2544 2866 5.769484 TTATCTCCAATCAGGACGTAGAC 57.231 43.478 0.00 0.00 43.07 2.59
2545 2867 5.220989 CGTTTATCTCCAATCAGGACGTAGA 60.221 44.000 0.00 0.00 43.07 2.59
2546 2868 4.976731 CGTTTATCTCCAATCAGGACGTAG 59.023 45.833 0.00 0.00 43.07 3.51
2547 2869 4.641541 TCGTTTATCTCCAATCAGGACGTA 59.358 41.667 0.00 0.00 43.07 3.57
2548 2870 3.446161 TCGTTTATCTCCAATCAGGACGT 59.554 43.478 0.00 0.00 43.07 4.34
2549 2871 3.797256 GTCGTTTATCTCCAATCAGGACG 59.203 47.826 0.00 0.00 43.07 4.79
2550 2872 4.806247 CAGTCGTTTATCTCCAATCAGGAC 59.194 45.833 0.00 0.00 43.07 3.85
2551 2873 4.141937 CCAGTCGTTTATCTCCAATCAGGA 60.142 45.833 0.00 0.00 46.75 3.86
2552 2874 4.122776 CCAGTCGTTTATCTCCAATCAGG 58.877 47.826 0.00 0.00 39.47 3.86
2553 2875 4.759782 ACCAGTCGTTTATCTCCAATCAG 58.240 43.478 0.00 0.00 0.00 2.90
2554 2876 4.676986 CGACCAGTCGTTTATCTCCAATCA 60.677 45.833 11.94 0.00 46.99 2.57
2555 2877 3.797256 CGACCAGTCGTTTATCTCCAATC 59.203 47.826 11.94 0.00 46.99 2.67
2556 2878 3.782046 CGACCAGTCGTTTATCTCCAAT 58.218 45.455 11.94 0.00 46.99 3.16
2557 2879 3.226346 CGACCAGTCGTTTATCTCCAA 57.774 47.619 11.94 0.00 46.99 3.53
2558 2880 2.933495 CGACCAGTCGTTTATCTCCA 57.067 50.000 11.94 0.00 46.99 3.86
2569 2891 0.667792 GTCAGCTTCCACGACCAGTC 60.668 60.000 0.00 0.00 0.00 3.51
2570 2892 1.115930 AGTCAGCTTCCACGACCAGT 61.116 55.000 0.00 0.00 0.00 4.00
2571 2893 0.888619 TAGTCAGCTTCCACGACCAG 59.111 55.000 0.00 0.00 0.00 4.00
2572 2894 1.204704 CATAGTCAGCTTCCACGACCA 59.795 52.381 0.00 0.00 0.00 4.02
2573 2895 1.471676 CCATAGTCAGCTTCCACGACC 60.472 57.143 0.00 0.00 0.00 4.79
2574 2896 1.204941 ACCATAGTCAGCTTCCACGAC 59.795 52.381 0.00 0.00 0.00 4.34
2575 2897 1.557099 ACCATAGTCAGCTTCCACGA 58.443 50.000 0.00 0.00 0.00 4.35
2576 2898 3.068165 TGATACCATAGTCAGCTTCCACG 59.932 47.826 0.00 0.00 0.00 4.94
2577 2899 4.672587 TGATACCATAGTCAGCTTCCAC 57.327 45.455 0.00 0.00 0.00 4.02
2578 2900 5.150715 AGATGATACCATAGTCAGCTTCCA 58.849 41.667 0.00 0.00 37.81 3.53
2579 2901 5.736951 AGATGATACCATAGTCAGCTTCC 57.263 43.478 0.00 0.00 37.81 3.46
2580 2902 7.066404 TCGATAGATGATACCATAGTCAGCTTC 59.934 40.741 0.00 0.00 41.02 3.86
2581 2903 6.887002 TCGATAGATGATACCATAGTCAGCTT 59.113 38.462 0.00 0.00 41.02 3.74
2582 2904 6.418946 TCGATAGATGATACCATAGTCAGCT 58.581 40.000 0.00 0.00 42.96 4.24
2583 2905 6.685527 TCGATAGATGATACCATAGTCAGC 57.314 41.667 0.00 0.00 42.67 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.