Multiple sequence alignment - TraesCS7A01G051400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G051400 chr7A 100.000 2639 0 0 1 2639 24927076 24924438 0.000000e+00 4874.0
1 TraesCS7A01G051400 chr7A 83.978 724 85 14 996 1693 24959633 24958915 0.000000e+00 665.0
2 TraesCS7A01G051400 chr7A 79.574 563 89 15 1037 1574 127910044 127910605 1.920000e-101 379.0
3 TraesCS7A01G051400 chr7A 87.129 101 12 1 2377 2477 128004790 128004691 2.150000e-21 113.0
4 TraesCS7A01G051400 chr7A 83.908 87 11 3 2380 2465 116003823 116003907 2.180000e-11 80.5
5 TraesCS7A01G051400 chr7D 90.065 1530 100 31 837 2342 24424815 24423314 0.000000e+00 1936.0
6 TraesCS7A01G051400 chr7D 88.543 707 55 10 1248 1935 24468944 24469643 0.000000e+00 833.0
7 TraesCS7A01G051400 chr7D 82.812 832 95 26 990 1780 24501087 24500263 0.000000e+00 701.0
8 TraesCS7A01G051400 chr7D 90.805 435 26 5 1336 1762 24430562 24430134 1.060000e-158 569.0
9 TraesCS7A01G051400 chr7D 90.353 425 28 8 837 1253 24439162 24439581 1.790000e-151 545.0
10 TraesCS7A01G051400 chr7D 87.654 405 40 5 1939 2342 24485580 24485975 1.850000e-126 462.0
11 TraesCS7A01G051400 chr7D 79.787 564 86 16 1037 1574 127419036 127418475 4.120000e-103 385.0
12 TraesCS7A01G051400 chr7D 93.617 141 9 0 1784 1924 24429150 24429010 7.400000e-51 211.0
13 TraesCS7A01G051400 chr7D 83.505 97 16 0 2381 2477 553062842 553062938 1.010000e-14 91.6
14 TraesCS7A01G051400 chr4A 93.146 963 60 5 736 1697 707250937 707251894 0.000000e+00 1408.0
15 TraesCS7A01G051400 chr4A 89.771 655 54 8 1697 2342 707251937 707252587 0.000000e+00 826.0
16 TraesCS7A01G051400 chr4A 87.172 647 57 8 95 736 707249617 707250242 0.000000e+00 712.0
17 TraesCS7A01G051400 chr3A 96.154 260 8 1 2381 2638 127298302 127298561 8.730000e-115 424.0
18 TraesCS7A01G051400 chr3A 87.671 73 6 1 672 741 696317552 696317480 6.050000e-12 82.4
19 TraesCS7A01G051400 chr7B 80.674 564 81 17 1037 1574 88974122 88974683 1.890000e-111 412.0
20 TraesCS7A01G051400 chr7B 87.448 239 22 4 2372 2609 150559269 150559038 4.330000e-68 268.0
21 TraesCS7A01G051400 chr7B 89.017 173 19 0 1040 1212 89207080 89206908 5.720000e-52 215.0
22 TraesCS7A01G051400 chr2B 89.057 265 25 2 2376 2639 321741321 321741060 2.530000e-85 326.0
23 TraesCS7A01G051400 chr1B 85.567 97 14 0 2381 2477 679574051 679573955 4.650000e-18 102.0
24 TraesCS7A01G051400 chr2A 85.000 100 13 2 2381 2479 516240952 516241050 1.670000e-17 100.0
25 TraesCS7A01G051400 chr4B 83.810 105 13 4 2376 2478 175866434 175866536 2.160000e-16 97.1
26 TraesCS7A01G051400 chr3B 94.643 56 3 0 672 727 747496962 747497017 1.300000e-13 87.9
27 TraesCS7A01G051400 chr3B 92.857 56 4 0 672 727 744415703 744415648 6.050000e-12 82.4
28 TraesCS7A01G051400 chr3B 85.714 63 9 0 672 734 511062751 511062813 1.700000e-07 67.6
29 TraesCS7A01G051400 chr6A 91.071 56 5 0 672 727 581833559 581833614 2.820000e-10 76.8
30 TraesCS7A01G051400 chr6A 87.931 58 6 1 670 727 586106781 586106837 1.700000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G051400 chr7A 24924438 24927076 2638 True 4874 4874 100.000000 1 2639 1 chr7A.!!$R1 2638
1 TraesCS7A01G051400 chr7A 24958915 24959633 718 True 665 665 83.978000 996 1693 1 chr7A.!!$R2 697
2 TraesCS7A01G051400 chr7A 127910044 127910605 561 False 379 379 79.574000 1037 1574 1 chr7A.!!$F2 537
3 TraesCS7A01G051400 chr7D 24423314 24424815 1501 True 1936 1936 90.065000 837 2342 1 chr7D.!!$R1 1505
4 TraesCS7A01G051400 chr7D 24468944 24469643 699 False 833 833 88.543000 1248 1935 1 chr7D.!!$F2 687
5 TraesCS7A01G051400 chr7D 24500263 24501087 824 True 701 701 82.812000 990 1780 1 chr7D.!!$R2 790
6 TraesCS7A01G051400 chr7D 24429010 24430562 1552 True 390 569 92.211000 1336 1924 2 chr7D.!!$R4 588
7 TraesCS7A01G051400 chr7D 127418475 127419036 561 True 385 385 79.787000 1037 1574 1 chr7D.!!$R3 537
8 TraesCS7A01G051400 chr4A 707249617 707252587 2970 False 982 1408 90.029667 95 2342 3 chr4A.!!$F1 2247
9 TraesCS7A01G051400 chr7B 88974122 88974683 561 False 412 412 80.674000 1037 1574 1 chr7B.!!$F1 537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
73 74 0.041238 CTCCCCTCTCTGTACCACCA 59.959 60.0 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 2558 0.376852 GCAGGCATCGACGCAAATAA 59.623 50.0 5.59 0.0 0.0 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.625649 AAAAGCACCTCTCATCTCCTC 57.374 47.619 0.00 0.00 0.00 3.71
32 33 2.548464 AAGCACCTCTCATCTCCTCT 57.452 50.000 0.00 0.00 0.00 3.69
33 34 2.071778 AGCACCTCTCATCTCCTCTC 57.928 55.000 0.00 0.00 0.00 3.20
34 35 1.570501 AGCACCTCTCATCTCCTCTCT 59.429 52.381 0.00 0.00 0.00 3.10
35 36 1.682854 GCACCTCTCATCTCCTCTCTG 59.317 57.143 0.00 0.00 0.00 3.35
36 37 1.682854 CACCTCTCATCTCCTCTCTGC 59.317 57.143 0.00 0.00 0.00 4.26
37 38 1.287442 ACCTCTCATCTCCTCTCTGCA 59.713 52.381 0.00 0.00 0.00 4.41
38 39 1.682854 CCTCTCATCTCCTCTCTGCAC 59.317 57.143 0.00 0.00 0.00 4.57
39 40 1.682854 CTCTCATCTCCTCTCTGCACC 59.317 57.143 0.00 0.00 0.00 5.01
40 41 0.752054 CTCATCTCCTCTCTGCACCC 59.248 60.000 0.00 0.00 0.00 4.61
41 42 0.041684 TCATCTCCTCTCTGCACCCA 59.958 55.000 0.00 0.00 0.00 4.51
42 43 0.177604 CATCTCCTCTCTGCACCCAC 59.822 60.000 0.00 0.00 0.00 4.61
43 44 0.980231 ATCTCCTCTCTGCACCCACC 60.980 60.000 0.00 0.00 0.00 4.61
44 45 2.607750 TCCTCTCTGCACCCACCC 60.608 66.667 0.00 0.00 0.00 4.61
45 46 4.087892 CCTCTCTGCACCCACCCG 62.088 72.222 0.00 0.00 0.00 5.28
46 47 4.767255 CTCTCTGCACCCACCCGC 62.767 72.222 0.00 0.00 0.00 6.13
56 57 4.410400 CCACCCGCCTTGGTCCTC 62.410 72.222 0.00 0.00 36.12 3.71
57 58 4.410400 CACCCGCCTTGGTCCTCC 62.410 72.222 0.00 0.00 36.12 4.30
61 62 3.787001 CGCCTTGGTCCTCCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
62 63 2.285743 GCCTTGGTCCTCCCCTCT 60.286 66.667 0.00 0.00 0.00 3.69
63 64 2.371259 GCCTTGGTCCTCCCCTCTC 61.371 68.421 0.00 0.00 0.00 3.20
64 65 1.394151 CCTTGGTCCTCCCCTCTCT 59.606 63.158 0.00 0.00 0.00 3.10
65 66 0.980231 CCTTGGTCCTCCCCTCTCTG 60.980 65.000 0.00 0.00 0.00 3.35
66 67 0.252467 CTTGGTCCTCCCCTCTCTGT 60.252 60.000 0.00 0.00 0.00 3.41
67 68 1.007238 CTTGGTCCTCCCCTCTCTGTA 59.993 57.143 0.00 0.00 0.00 2.74
68 69 0.335361 TGGTCCTCCCCTCTCTGTAC 59.665 60.000 0.00 0.00 0.00 2.90
69 70 0.397394 GGTCCTCCCCTCTCTGTACC 60.397 65.000 0.00 0.00 0.00 3.34
70 71 0.335361 GTCCTCCCCTCTCTGTACCA 59.665 60.000 0.00 0.00 0.00 3.25
71 72 0.335361 TCCTCCCCTCTCTGTACCAC 59.665 60.000 0.00 0.00 0.00 4.16
72 73 0.688087 CCTCCCCTCTCTGTACCACC 60.688 65.000 0.00 0.00 0.00 4.61
73 74 0.041238 CTCCCCTCTCTGTACCACCA 59.959 60.000 0.00 0.00 0.00 4.17
74 75 0.716591 TCCCCTCTCTGTACCACCAT 59.283 55.000 0.00 0.00 0.00 3.55
75 76 1.123928 CCCCTCTCTGTACCACCATC 58.876 60.000 0.00 0.00 0.00 3.51
76 77 1.622449 CCCCTCTCTGTACCACCATCA 60.622 57.143 0.00 0.00 0.00 3.07
77 78 2.402564 CCCTCTCTGTACCACCATCAT 58.597 52.381 0.00 0.00 0.00 2.45
78 79 2.774234 CCCTCTCTGTACCACCATCATT 59.226 50.000 0.00 0.00 0.00 2.57
79 80 3.432749 CCCTCTCTGTACCACCATCATTG 60.433 52.174 0.00 0.00 0.00 2.82
80 81 3.201290 CTCTCTGTACCACCATCATTGC 58.799 50.000 0.00 0.00 0.00 3.56
81 82 2.571202 TCTCTGTACCACCATCATTGCA 59.429 45.455 0.00 0.00 0.00 4.08
82 83 2.679837 CTCTGTACCACCATCATTGCAC 59.320 50.000 0.00 0.00 0.00 4.57
83 84 1.745087 CTGTACCACCATCATTGCACC 59.255 52.381 0.00 0.00 0.00 5.01
84 85 1.102978 GTACCACCATCATTGCACCC 58.897 55.000 0.00 0.00 0.00 4.61
85 86 0.701147 TACCACCATCATTGCACCCA 59.299 50.000 0.00 0.00 0.00 4.51
86 87 0.899717 ACCACCATCATTGCACCCAC 60.900 55.000 0.00 0.00 0.00 4.61
87 88 1.606885 CCACCATCATTGCACCCACC 61.607 60.000 0.00 0.00 0.00 4.61
88 89 1.305213 ACCATCATTGCACCCACCC 60.305 57.895 0.00 0.00 0.00 4.61
89 90 1.305129 CCATCATTGCACCCACCCA 60.305 57.895 0.00 0.00 0.00 4.51
90 91 1.606885 CCATCATTGCACCCACCCAC 61.607 60.000 0.00 0.00 0.00 4.61
91 92 1.305213 ATCATTGCACCCACCCACC 60.305 57.895 0.00 0.00 0.00 4.61
92 93 2.803593 ATCATTGCACCCACCCACCC 62.804 60.000 0.00 0.00 0.00 4.61
93 94 4.315264 ATTGCACCCACCCACCCC 62.315 66.667 0.00 0.00 0.00 4.95
96 97 4.233558 GCACCCACCCACCCCTTT 62.234 66.667 0.00 0.00 0.00 3.11
97 98 2.117423 CACCCACCCACCCCTTTC 59.883 66.667 0.00 0.00 0.00 2.62
98 99 3.190391 ACCCACCCACCCCTTTCC 61.190 66.667 0.00 0.00 0.00 3.13
99 100 2.863988 CCCACCCACCCCTTTCCT 60.864 66.667 0.00 0.00 0.00 3.36
104 105 0.187606 ACCCACCCCTTTCCTTGTTC 59.812 55.000 0.00 0.00 0.00 3.18
108 109 0.554305 ACCCCTTTCCTTGTTCCGTT 59.446 50.000 0.00 0.00 0.00 4.44
118 119 0.453793 TTGTTCCGTTGGTGTGCTTG 59.546 50.000 0.00 0.00 0.00 4.01
124 125 0.588730 CGTTGGTGTGCTTGTCGTTG 60.589 55.000 0.00 0.00 0.00 4.10
134 135 0.247736 CTTGTCGTTGGAGGAGGGAG 59.752 60.000 0.00 0.00 0.00 4.30
136 137 1.185618 TGTCGTTGGAGGAGGGAGTG 61.186 60.000 0.00 0.00 0.00 3.51
165 166 0.600557 ATCTCCGTCGGATCATCTGC 59.399 55.000 15.81 0.00 0.00 4.26
169 170 1.138859 TCCGTCGGATCATCTGCAATT 59.861 47.619 10.71 0.00 0.00 2.32
171 172 1.190984 CGTCGGATCATCTGCAATTCG 59.809 52.381 0.00 0.00 0.00 3.34
176 177 3.123116 CGGATCATCTGCAATTCGATCAG 59.877 47.826 13.79 8.33 35.29 2.90
182 183 8.837788 ATCATCTGCAATTCGATCAGTATTAA 57.162 30.769 0.00 0.00 0.00 1.40
187 188 9.541143 TCTGCAATTCGATCAGTATTAATTACA 57.459 29.630 0.00 0.00 32.87 2.41
235 236 4.778534 TCGTGGTCTTCGAAGTTTCTAT 57.221 40.909 23.85 0.00 34.36 1.98
297 301 1.299165 CTTGTAGATCGGGGTCGCG 60.299 63.158 0.00 0.00 36.13 5.87
309 313 4.388499 GTCGCGGGCCTTTCCTGA 62.388 66.667 6.13 0.00 44.37 3.86
330 334 0.877649 CTGCATCGATGACTTCCCGG 60.878 60.000 29.20 10.90 0.00 5.73
342 346 2.168728 GACTTCCCGGTCATAGCTTCTT 59.831 50.000 0.00 0.00 36.35 2.52
345 349 2.184533 TCCCGGTCATAGCTTCTTCAA 58.815 47.619 0.00 0.00 0.00 2.69
368 372 9.748708 TCAAGATCCTGAATTTAAACAAGTTTG 57.251 29.630 8.37 0.00 34.23 2.93
369 373 8.490355 CAAGATCCTGAATTTAAACAAGTTTGC 58.510 33.333 8.37 0.00 34.23 3.68
370 374 7.955918 AGATCCTGAATTTAAACAAGTTTGCT 58.044 30.769 8.37 0.00 34.23 3.91
371 375 8.084684 AGATCCTGAATTTAAACAAGTTTGCTC 58.915 33.333 8.37 1.23 34.23 4.26
374 378 6.760770 CCTGAATTTAAACAAGTTTGCTCCAA 59.239 34.615 8.37 0.00 34.23 3.53
375 379 7.442062 CCTGAATTTAAACAAGTTTGCTCCAAT 59.558 33.333 8.37 0.00 34.23 3.16
377 381 7.984050 TGAATTTAAACAAGTTTGCTCCAATGA 59.016 29.630 8.37 0.00 34.23 2.57
379 383 4.326504 AAACAAGTTTGCTCCAATGAGG 57.673 40.909 0.00 0.00 39.14 3.86
382 386 0.962356 AGTTTGCTCCAATGAGGCGG 60.962 55.000 0.00 0.00 39.14 6.13
383 387 0.960364 GTTTGCTCCAATGAGGCGGA 60.960 55.000 0.00 0.00 39.14 5.54
448 452 2.909006 TGGATGCAGGAAGAAGAAGACT 59.091 45.455 0.00 0.00 0.00 3.24
455 459 4.759183 GCAGGAAGAAGAAGACTTTGTCAT 59.241 41.667 0.46 0.00 36.39 3.06
502 506 7.276658 TGCTATGTTTTTGTAAAGGTGTGTTTG 59.723 33.333 0.00 0.00 0.00 2.93
546 550 0.882927 TCACCTTTGACCCTTTCGCG 60.883 55.000 0.00 0.00 0.00 5.87
548 552 0.179040 ACCTTTGACCCTTTCGCGAA 60.179 50.000 19.38 19.38 0.00 4.70
549 553 0.948678 CCTTTGACCCTTTCGCGAAA 59.051 50.000 30.47 30.47 0.00 3.46
553 557 4.320641 CCTTTGACCCTTTCGCGAAAAATA 60.321 41.667 31.68 12.95 0.00 1.40
591 595 2.350738 CCAAACGGGGCATCAAGTT 58.649 52.632 0.00 0.00 0.00 2.66
599 603 3.829601 ACGGGGCATCAAGTTAAATTTCA 59.170 39.130 0.00 0.00 0.00 2.69
603 607 6.128580 CGGGGCATCAAGTTAAATTTCAAAAG 60.129 38.462 0.00 0.00 0.00 2.27
621 625 7.416154 TCAAAAGACAATAGTGGACTAAACG 57.584 36.000 0.00 0.00 31.39 3.60
675 679 0.674895 ACTCTCGTGGCTGCATTTCC 60.675 55.000 0.50 0.00 0.00 3.13
694 700 2.091720 TCCAAGGGCATCATACTTGCAT 60.092 45.455 0.00 0.00 41.95 3.96
700 706 4.467082 AGGGCATCATACTTGCATTTGAAA 59.533 37.500 0.00 0.00 41.95 2.69
748 1449 2.501723 ACGAATATGTTGGAGCTGACCT 59.498 45.455 0.00 0.00 0.00 3.85
749 1450 2.868583 CGAATATGTTGGAGCTGACCTG 59.131 50.000 0.00 0.00 0.00 4.00
752 1453 2.664402 ATGTTGGAGCTGACCTGTTT 57.336 45.000 0.00 0.00 0.00 2.83
758 1459 2.024414 GGAGCTGACCTGTTTGTTTGT 58.976 47.619 0.00 0.00 0.00 2.83
762 1463 2.163412 GCTGACCTGTTTGTTTGTGTCA 59.837 45.455 0.00 0.00 0.00 3.58
764 1465 3.417101 TGACCTGTTTGTTTGTGTCAGT 58.583 40.909 0.00 0.00 0.00 3.41
772 1473 0.730265 GTTTGTGTCAGTGCGTTGGA 59.270 50.000 0.00 0.00 0.00 3.53
774 1475 1.092921 TTGTGTCAGTGCGTTGGACC 61.093 55.000 0.00 0.00 0.00 4.46
775 1476 2.279851 TGTCAGTGCGTTGGACCG 60.280 61.111 0.00 0.00 0.00 4.79
786 1487 2.796735 GCGTTGGACCGTGATTTTTGTT 60.797 45.455 0.00 0.00 0.00 2.83
788 1489 3.040099 GTTGGACCGTGATTTTTGTTCG 58.960 45.455 0.00 0.00 0.00 3.95
793 1494 4.671964 GGACCGTGATTTTTGTTCGTTTAC 59.328 41.667 0.00 0.00 0.00 2.01
795 1496 5.267776 ACCGTGATTTTTGTTCGTTTACAG 58.732 37.500 0.00 0.00 0.00 2.74
809 1510 9.275398 TGTTCGTTTACAGTTAAACTAATGGAT 57.725 29.630 5.90 0.00 43.44 3.41
812 1513 7.388224 TCGTTTACAGTTAAACTAATGGATGCA 59.612 33.333 0.00 0.00 43.44 3.96
829 1530 4.276926 GGATGCAGACAGATAAAATGGGTC 59.723 45.833 0.00 0.00 0.00 4.46
844 1545 1.448893 GGTCGCCGCATTGGAGTTA 60.449 57.895 0.00 0.00 42.00 2.24
878 1579 6.398918 ACTTGCTGGTAGTGTATTCTACTTG 58.601 40.000 0.00 0.00 39.85 3.16
942 1648 1.535462 CCACGAACACAAAGGTCCATC 59.465 52.381 0.00 0.00 0.00 3.51
966 1672 2.579207 GCTCATTAGCCAGTACACGA 57.421 50.000 0.00 0.00 43.40 4.35
978 1684 0.247185 GTACACGATTCCCCGACCAA 59.753 55.000 0.00 0.00 0.00 3.67
979 1685 0.975135 TACACGATTCCCCGACCAAA 59.025 50.000 0.00 0.00 0.00 3.28
982 1688 1.816224 CACGATTCCCCGACCAAAAAT 59.184 47.619 0.00 0.00 0.00 1.82
984 1690 3.440872 CACGATTCCCCGACCAAAAATAA 59.559 43.478 0.00 0.00 0.00 1.40
985 1691 3.692593 ACGATTCCCCGACCAAAAATAAG 59.307 43.478 0.00 0.00 0.00 1.73
986 1692 3.692593 CGATTCCCCGACCAAAAATAAGT 59.307 43.478 0.00 0.00 0.00 2.24
1021 1735 4.479993 CCGAGCAGGGGAGCAAGG 62.480 72.222 0.00 0.00 36.85 3.61
1119 1833 2.434185 GCAGTGATCGTTCGGGCA 60.434 61.111 0.00 0.00 0.00 5.36
1197 1911 1.092348 CTGTCGACTACATCCCGTCA 58.908 55.000 17.92 0.00 37.50 4.35
1234 1948 1.292541 GTCGTGGTCTTCAGGGTCC 59.707 63.158 0.00 0.00 32.53 4.46
1432 2173 2.764128 GGGAGGACCTGCCGATGA 60.764 66.667 17.31 0.00 43.43 2.92
1444 2185 2.202557 CGATGAGGTACGTGCGCA 60.203 61.111 5.66 5.66 0.00 6.09
1623 2388 1.664649 CTTCGACAAGCTGGACGCA 60.665 57.895 8.17 0.00 42.61 5.24
1695 2509 3.103080 AGCTAGCTTGGTACCTACTGT 57.897 47.619 12.68 0.00 0.00 3.55
1696 2510 4.246712 AGCTAGCTTGGTACCTACTGTA 57.753 45.455 12.68 0.00 0.00 2.74
1729 2557 7.966753 TGTAAACTGTATTGTAGTAAGCTCGAG 59.033 37.037 8.45 8.45 0.00 4.04
1730 2558 6.512342 AACTGTATTGTAGTAAGCTCGAGT 57.488 37.500 15.13 0.00 0.00 4.18
1731 2559 6.512342 ACTGTATTGTAGTAAGCTCGAGTT 57.488 37.500 15.13 4.78 0.00 3.01
1732 2560 7.621428 ACTGTATTGTAGTAAGCTCGAGTTA 57.379 36.000 15.13 8.63 0.00 2.24
1733 2561 8.223177 ACTGTATTGTAGTAAGCTCGAGTTAT 57.777 34.615 15.13 3.16 0.00 1.89
1734 2562 8.684520 ACTGTATTGTAGTAAGCTCGAGTTATT 58.315 33.333 15.13 9.35 0.00 1.40
1735 2563 9.517609 CTGTATTGTAGTAAGCTCGAGTTATTT 57.482 33.333 15.13 6.58 0.00 1.40
1736 2564 9.297586 TGTATTGTAGTAAGCTCGAGTTATTTG 57.702 33.333 15.13 0.00 0.00 2.32
1737 2565 6.642683 TTGTAGTAAGCTCGAGTTATTTGC 57.357 37.500 15.13 7.54 0.00 3.68
1740 2572 3.858238 AGTAAGCTCGAGTTATTTGCGTC 59.142 43.478 15.13 0.00 0.00 5.19
1802 3597 4.380628 GCAGTGCAGCAGCGTGAC 62.381 66.667 11.09 0.00 46.23 3.67
1876 3673 2.423185 TCTTTGTTGCAGTGAACACCAG 59.577 45.455 0.00 1.78 35.56 4.00
1905 3702 4.877251 GGTGTAATAAGTTGCAATCGGGTA 59.123 41.667 0.59 0.00 31.62 3.69
1937 3734 4.641541 TGTTTAGCATGACTGATGGGATTG 59.358 41.667 0.00 0.00 31.99 2.67
1941 3738 3.117625 AGCATGACTGATGGGATTGATGT 60.118 43.478 0.00 0.00 31.99 3.06
1958 3755 1.119684 TGTATCATGGGTCCCACGAG 58.880 55.000 14.57 6.63 35.80 4.18
1967 3764 2.372504 TGGGTCCCACGAGTGATAAAAA 59.627 45.455 6.47 0.00 0.00 1.94
2005 3802 6.603201 TGGCAAAATAATTGTTCACCCAAAAA 59.397 30.769 0.00 0.00 0.00 1.94
2053 3850 8.941977 CATTGTTAAGCAGTACTACACCAATTA 58.058 33.333 0.00 0.00 0.00 1.40
2081 3879 9.260002 GGTTTTGTGAATGATTGATGTTTACTT 57.740 29.630 0.00 0.00 0.00 2.24
2342 4142 7.309990 GGCATTGGCATTTCATGTATAATAGGT 60.310 37.037 5.17 0.00 43.71 3.08
2343 4143 7.543172 GCATTGGCATTTCATGTATAATAGGTG 59.457 37.037 0.00 0.00 40.72 4.00
2344 4144 8.795513 CATTGGCATTTCATGTATAATAGGTGA 58.204 33.333 0.00 0.00 0.00 4.02
2345 4145 8.759481 TTGGCATTTCATGTATAATAGGTGAA 57.241 30.769 0.00 0.00 0.00 3.18
2346 4146 8.938801 TGGCATTTCATGTATAATAGGTGAAT 57.061 30.769 0.00 0.00 0.00 2.57
2347 4147 9.365906 TGGCATTTCATGTATAATAGGTGAATT 57.634 29.630 0.00 0.00 0.00 2.17
2356 4156 8.360325 TGTATAATAGGTGAATTACTTGCACG 57.640 34.615 0.00 0.00 33.48 5.34
2357 4157 8.198778 TGTATAATAGGTGAATTACTTGCACGA 58.801 33.333 0.00 0.00 33.48 4.35
2358 4158 9.204570 GTATAATAGGTGAATTACTTGCACGAT 57.795 33.333 0.00 0.00 33.48 3.73
2359 4159 5.991328 ATAGGTGAATTACTTGCACGATG 57.009 39.130 0.00 0.00 33.48 3.84
2360 4160 3.009723 AGGTGAATTACTTGCACGATGG 58.990 45.455 0.00 0.00 33.48 3.51
2361 4161 2.097466 GGTGAATTACTTGCACGATGGG 59.903 50.000 0.00 0.00 33.48 4.00
2362 4162 2.747446 GTGAATTACTTGCACGATGGGT 59.253 45.455 0.00 0.00 0.00 4.51
2363 4163 3.190535 GTGAATTACTTGCACGATGGGTT 59.809 43.478 0.00 0.00 0.00 4.11
2364 4164 3.823873 TGAATTACTTGCACGATGGGTTT 59.176 39.130 0.00 0.00 0.00 3.27
2365 4165 5.004448 TGAATTACTTGCACGATGGGTTTA 58.996 37.500 0.00 0.00 0.00 2.01
2366 4166 5.123186 TGAATTACTTGCACGATGGGTTTAG 59.877 40.000 0.00 0.00 0.00 1.85
2367 4167 1.821216 ACTTGCACGATGGGTTTAGG 58.179 50.000 0.00 0.00 0.00 2.69
2368 4168 1.094785 CTTGCACGATGGGTTTAGGG 58.905 55.000 0.00 0.00 0.00 3.53
2369 4169 0.402504 TTGCACGATGGGTTTAGGGT 59.597 50.000 0.00 0.00 0.00 4.34
2370 4170 0.035820 TGCACGATGGGTTTAGGGTC 60.036 55.000 0.00 0.00 0.00 4.46
2371 4171 0.252197 GCACGATGGGTTTAGGGTCT 59.748 55.000 0.00 0.00 0.00 3.85
2372 4172 1.483415 GCACGATGGGTTTAGGGTCTA 59.517 52.381 0.00 0.00 0.00 2.59
2373 4173 2.104281 GCACGATGGGTTTAGGGTCTAT 59.896 50.000 0.00 0.00 0.00 1.98
2374 4174 3.728845 CACGATGGGTTTAGGGTCTATG 58.271 50.000 0.00 0.00 0.00 2.23
2375 4175 2.104281 ACGATGGGTTTAGGGTCTATGC 59.896 50.000 0.00 0.00 0.00 3.14
2376 4176 2.368875 CGATGGGTTTAGGGTCTATGCT 59.631 50.000 0.00 0.00 0.00 3.79
2377 4177 3.576982 CGATGGGTTTAGGGTCTATGCTA 59.423 47.826 0.00 0.00 0.00 3.49
2378 4178 4.223032 CGATGGGTTTAGGGTCTATGCTAT 59.777 45.833 0.00 0.00 0.00 2.97
2379 4179 5.421056 CGATGGGTTTAGGGTCTATGCTATA 59.579 44.000 0.00 0.00 0.00 1.31
2380 4180 6.622427 ATGGGTTTAGGGTCTATGCTATAC 57.378 41.667 0.00 0.00 0.00 1.47
2381 4181 4.525487 TGGGTTTAGGGTCTATGCTATACG 59.475 45.833 0.00 0.00 0.00 3.06
2382 4182 4.768968 GGGTTTAGGGTCTATGCTATACGA 59.231 45.833 0.00 0.00 0.00 3.43
2383 4183 5.244626 GGGTTTAGGGTCTATGCTATACGAA 59.755 44.000 0.00 0.00 0.00 3.85
2384 4184 6.239402 GGGTTTAGGGTCTATGCTATACGAAA 60.239 42.308 0.00 0.00 0.00 3.46
2385 4185 7.384477 GGTTTAGGGTCTATGCTATACGAAAT 58.616 38.462 0.00 0.00 0.00 2.17
2386 4186 7.876582 GGTTTAGGGTCTATGCTATACGAAATT 59.123 37.037 0.00 0.00 0.00 1.82
2387 4187 8.709646 GTTTAGGGTCTATGCTATACGAAATTG 58.290 37.037 0.00 0.00 0.00 2.32
2388 4188 5.238583 AGGGTCTATGCTATACGAAATTGC 58.761 41.667 0.00 0.00 0.00 3.56
2389 4189 4.994852 GGGTCTATGCTATACGAAATTGCA 59.005 41.667 12.01 12.01 38.05 4.08
2390 4190 5.643777 GGGTCTATGCTATACGAAATTGCAT 59.356 40.000 20.41 20.41 44.93 3.96
2391 4191 6.816640 GGGTCTATGCTATACGAAATTGCATA 59.183 38.462 20.44 20.44 43.09 3.14
2395 4195 6.974932 ATGCTATACGAAATTGCATAGGAG 57.025 37.500 17.24 0.00 41.75 3.69
2396 4196 4.690748 TGCTATACGAAATTGCATAGGAGC 59.309 41.667 7.31 0.00 0.00 4.70
2397 4197 4.690748 GCTATACGAAATTGCATAGGAGCA 59.309 41.667 0.00 0.00 43.99 4.26
2398 4198 5.389935 GCTATACGAAATTGCATAGGAGCAC 60.390 44.000 0.00 0.00 45.61 4.40
2399 4199 2.991250 ACGAAATTGCATAGGAGCACT 58.009 42.857 0.00 0.00 45.61 4.40
2400 4200 2.939103 ACGAAATTGCATAGGAGCACTC 59.061 45.455 0.00 0.00 45.61 3.51
2401 4201 2.033407 CGAAATTGCATAGGAGCACTCG 60.033 50.000 0.00 0.00 45.61 4.18
2402 4202 1.959042 AATTGCATAGGAGCACTCGG 58.041 50.000 0.00 0.00 45.61 4.63
2403 4203 0.533755 ATTGCATAGGAGCACTCGGC 60.534 55.000 0.00 0.00 45.61 5.54
2421 4221 4.778143 GACGCTGCCCACCGGAAT 62.778 66.667 9.46 0.00 0.00 3.01
2422 4222 4.778143 ACGCTGCCCACCGGAATC 62.778 66.667 9.46 0.00 0.00 2.52
2424 4224 4.115199 GCTGCCCACCGGAATCCT 62.115 66.667 9.46 0.00 0.00 3.24
2425 4225 2.124570 CTGCCCACCGGAATCCTG 60.125 66.667 9.46 0.00 0.00 3.86
2426 4226 4.424711 TGCCCACCGGAATCCTGC 62.425 66.667 9.46 2.03 0.00 4.85
2428 4228 4.506255 CCCACCGGAATCCTGCCC 62.506 72.222 9.46 0.00 0.00 5.36
2429 4229 3.727258 CCACCGGAATCCTGCCCA 61.727 66.667 9.46 0.00 0.00 5.36
2430 4230 2.438434 CACCGGAATCCTGCCCAC 60.438 66.667 9.46 0.00 0.00 4.61
2431 4231 3.728373 ACCGGAATCCTGCCCACC 61.728 66.667 9.46 0.00 0.00 4.61
2432 4232 4.506255 CCGGAATCCTGCCCACCC 62.506 72.222 0.00 0.00 0.00 4.61
2433 4233 3.727258 CGGAATCCTGCCCACCCA 61.727 66.667 0.00 0.00 0.00 4.51
2434 4234 2.043953 GGAATCCTGCCCACCCAC 60.044 66.667 0.00 0.00 0.00 4.61
2435 4235 2.616458 GGAATCCTGCCCACCCACT 61.616 63.158 0.00 0.00 0.00 4.00
2436 4236 1.384191 GAATCCTGCCCACCCACTT 59.616 57.895 0.00 0.00 0.00 3.16
2437 4237 0.967380 GAATCCTGCCCACCCACTTG 60.967 60.000 0.00 0.00 0.00 3.16
2438 4238 1.729267 AATCCTGCCCACCCACTTGT 61.729 55.000 0.00 0.00 0.00 3.16
2439 4239 2.142292 ATCCTGCCCACCCACTTGTC 62.142 60.000 0.00 0.00 0.00 3.18
2440 4240 2.833913 CCTGCCCACCCACTTGTCT 61.834 63.158 0.00 0.00 0.00 3.41
2441 4241 1.302832 CTGCCCACCCACTTGTCTC 60.303 63.158 0.00 0.00 0.00 3.36
2442 4242 2.358737 GCCCACCCACTTGTCTCG 60.359 66.667 0.00 0.00 0.00 4.04
2443 4243 2.347490 CCCACCCACTTGTCTCGG 59.653 66.667 0.00 0.00 0.00 4.63
2444 4244 2.347490 CCACCCACTTGTCTCGGG 59.653 66.667 0.00 0.00 46.22 5.14
2445 4245 2.214216 CCACCCACTTGTCTCGGGA 61.214 63.158 0.00 0.00 43.21 5.14
2446 4246 1.553690 CCACCCACTTGTCTCGGGAT 61.554 60.000 0.00 0.00 43.21 3.85
2447 4247 0.108138 CACCCACTTGTCTCGGGATC 60.108 60.000 0.00 0.00 43.21 3.36
2448 4248 0.252284 ACCCACTTGTCTCGGGATCT 60.252 55.000 0.00 0.00 43.21 2.75
2449 4249 0.176680 CCCACTTGTCTCGGGATCTG 59.823 60.000 0.00 0.00 43.21 2.90
2450 4250 0.460987 CCACTTGTCTCGGGATCTGC 60.461 60.000 0.00 0.00 0.00 4.26
2451 4251 0.247460 CACTTGTCTCGGGATCTGCA 59.753 55.000 0.00 0.00 0.00 4.41
2452 4252 0.976641 ACTTGTCTCGGGATCTGCAA 59.023 50.000 0.00 0.00 0.00 4.08
2453 4253 1.556911 ACTTGTCTCGGGATCTGCAAT 59.443 47.619 0.00 0.00 0.00 3.56
2454 4254 2.208431 CTTGTCTCGGGATCTGCAATC 58.792 52.381 0.00 0.00 0.00 2.67
2455 4255 1.194218 TGTCTCGGGATCTGCAATCA 58.806 50.000 0.00 0.00 0.00 2.57
2456 4256 1.134699 TGTCTCGGGATCTGCAATCAC 60.135 52.381 0.00 6.25 0.00 3.06
2457 4257 1.137872 GTCTCGGGATCTGCAATCACT 59.862 52.381 0.00 0.00 0.00 3.41
2458 4258 2.362397 GTCTCGGGATCTGCAATCACTA 59.638 50.000 0.00 0.00 0.00 2.74
2459 4259 3.006323 GTCTCGGGATCTGCAATCACTAT 59.994 47.826 0.00 0.00 0.00 2.12
2460 4260 4.218635 GTCTCGGGATCTGCAATCACTATA 59.781 45.833 0.00 0.00 0.00 1.31
2461 4261 5.019470 TCTCGGGATCTGCAATCACTATAT 58.981 41.667 8.74 0.00 0.00 0.86
2462 4262 5.481824 TCTCGGGATCTGCAATCACTATATT 59.518 40.000 8.74 0.00 0.00 1.28
2463 4263 6.663523 TCTCGGGATCTGCAATCACTATATTA 59.336 38.462 8.74 0.00 0.00 0.98
2464 4264 6.867550 TCGGGATCTGCAATCACTATATTAG 58.132 40.000 8.74 0.00 0.00 1.73
2465 4265 5.521735 CGGGATCTGCAATCACTATATTAGC 59.478 44.000 8.74 0.00 0.00 3.09
2466 4266 5.819901 GGGATCTGCAATCACTATATTAGCC 59.180 44.000 9.92 0.00 0.00 3.93
2467 4267 6.409704 GGATCTGCAATCACTATATTAGCCA 58.590 40.000 9.92 0.00 0.00 4.75
2468 4268 6.314896 GGATCTGCAATCACTATATTAGCCAC 59.685 42.308 9.92 0.00 0.00 5.01
2469 4269 6.173427 TCTGCAATCACTATATTAGCCACA 57.827 37.500 0.00 0.00 0.00 4.17
2470 4270 5.991606 TCTGCAATCACTATATTAGCCACAC 59.008 40.000 0.00 0.00 0.00 3.82
2471 4271 5.063204 TGCAATCACTATATTAGCCACACC 58.937 41.667 0.00 0.00 0.00 4.16
2472 4272 4.152402 GCAATCACTATATTAGCCACACCG 59.848 45.833 0.00 0.00 0.00 4.94
2473 4273 5.297547 CAATCACTATATTAGCCACACCGT 58.702 41.667 0.00 0.00 0.00 4.83
2474 4274 6.452242 CAATCACTATATTAGCCACACCGTA 58.548 40.000 0.00 0.00 0.00 4.02
2475 4275 6.852420 ATCACTATATTAGCCACACCGTAT 57.148 37.500 0.00 0.00 0.00 3.06
2476 4276 6.659745 TCACTATATTAGCCACACCGTATT 57.340 37.500 0.00 0.00 0.00 1.89
2477 4277 6.684686 TCACTATATTAGCCACACCGTATTC 58.315 40.000 0.00 0.00 0.00 1.75
2478 4278 6.492429 TCACTATATTAGCCACACCGTATTCT 59.508 38.462 0.00 0.00 0.00 2.40
2479 4279 6.807230 CACTATATTAGCCACACCGTATTCTC 59.193 42.308 0.00 0.00 0.00 2.87
2480 4280 5.801531 ATATTAGCCACACCGTATTCTCA 57.198 39.130 0.00 0.00 0.00 3.27
2481 4281 4.689612 ATTAGCCACACCGTATTCTCAT 57.310 40.909 0.00 0.00 0.00 2.90
2482 4282 4.481368 TTAGCCACACCGTATTCTCATT 57.519 40.909 0.00 0.00 0.00 2.57
2483 4283 3.350219 AGCCACACCGTATTCTCATTT 57.650 42.857 0.00 0.00 0.00 2.32
2484 4284 3.009723 AGCCACACCGTATTCTCATTTG 58.990 45.455 0.00 0.00 0.00 2.32
2485 4285 2.477863 GCCACACCGTATTCTCATTTGC 60.478 50.000 0.00 0.00 0.00 3.68
2486 4286 3.009723 CCACACCGTATTCTCATTTGCT 58.990 45.455 0.00 0.00 0.00 3.91
2487 4287 3.440173 CCACACCGTATTCTCATTTGCTT 59.560 43.478 0.00 0.00 0.00 3.91
2488 4288 4.082787 CCACACCGTATTCTCATTTGCTTT 60.083 41.667 0.00 0.00 0.00 3.51
2489 4289 5.460646 CACACCGTATTCTCATTTGCTTTT 58.539 37.500 0.00 0.00 0.00 2.27
2490 4290 5.343058 CACACCGTATTCTCATTTGCTTTTG 59.657 40.000 0.00 0.00 0.00 2.44
2491 4291 4.858692 CACCGTATTCTCATTTGCTTTTGG 59.141 41.667 0.00 0.00 0.00 3.28
2492 4292 3.859386 CCGTATTCTCATTTGCTTTTGGC 59.141 43.478 0.00 0.00 42.22 4.52
2493 4293 4.380867 CCGTATTCTCATTTGCTTTTGGCT 60.381 41.667 0.00 0.00 42.39 4.75
2494 4294 4.795278 CGTATTCTCATTTGCTTTTGGCTC 59.205 41.667 0.00 0.00 42.39 4.70
2495 4295 2.995466 TCTCATTTGCTTTTGGCTCG 57.005 45.000 0.00 0.00 42.39 5.03
2496 4296 2.229792 TCTCATTTGCTTTTGGCTCGT 58.770 42.857 0.00 0.00 42.39 4.18
2497 4297 3.407698 TCTCATTTGCTTTTGGCTCGTA 58.592 40.909 0.00 0.00 42.39 3.43
2498 4298 4.009675 TCTCATTTGCTTTTGGCTCGTAT 58.990 39.130 0.00 0.00 42.39 3.06
2499 4299 4.094887 TCTCATTTGCTTTTGGCTCGTATC 59.905 41.667 0.00 0.00 42.39 2.24
2500 4300 4.009675 TCATTTGCTTTTGGCTCGTATCT 58.990 39.130 0.00 0.00 42.39 1.98
2501 4301 3.829886 TTTGCTTTTGGCTCGTATCTG 57.170 42.857 0.00 0.00 42.39 2.90
2502 4302 2.472695 TGCTTTTGGCTCGTATCTGT 57.527 45.000 0.00 0.00 42.39 3.41
2503 4303 2.346803 TGCTTTTGGCTCGTATCTGTC 58.653 47.619 0.00 0.00 42.39 3.51
2504 4304 1.666189 GCTTTTGGCTCGTATCTGTCC 59.334 52.381 0.00 0.00 38.06 4.02
2505 4305 2.678190 GCTTTTGGCTCGTATCTGTCCT 60.678 50.000 0.00 0.00 38.06 3.85
2506 4306 3.430374 GCTTTTGGCTCGTATCTGTCCTA 60.430 47.826 0.00 0.00 38.06 2.94
2507 4307 4.755411 CTTTTGGCTCGTATCTGTCCTAA 58.245 43.478 0.00 0.00 0.00 2.69
2508 4308 4.811969 TTTGGCTCGTATCTGTCCTAAA 57.188 40.909 0.00 0.00 0.00 1.85
2509 4309 4.386867 TTGGCTCGTATCTGTCCTAAAG 57.613 45.455 0.00 0.00 0.00 1.85
2510 4310 3.362706 TGGCTCGTATCTGTCCTAAAGT 58.637 45.455 0.00 0.00 0.00 2.66
2511 4311 3.380637 TGGCTCGTATCTGTCCTAAAGTC 59.619 47.826 0.00 0.00 0.00 3.01
2512 4312 3.243468 GGCTCGTATCTGTCCTAAAGTCC 60.243 52.174 0.00 0.00 0.00 3.85
2513 4313 3.380637 GCTCGTATCTGTCCTAAAGTCCA 59.619 47.826 0.00 0.00 0.00 4.02
2514 4314 4.734108 GCTCGTATCTGTCCTAAAGTCCAC 60.734 50.000 0.00 0.00 0.00 4.02
2515 4315 3.376234 TCGTATCTGTCCTAAAGTCCACG 59.624 47.826 0.00 0.00 0.00 4.94
2516 4316 2.674796 ATCTGTCCTAAAGTCCACGC 57.325 50.000 0.00 0.00 0.00 5.34
2517 4317 0.242825 TCTGTCCTAAAGTCCACGCG 59.757 55.000 3.53 3.53 0.00 6.01
2518 4318 0.038526 CTGTCCTAAAGTCCACGCGT 60.039 55.000 5.58 5.58 0.00 6.01
2519 4319 0.390124 TGTCCTAAAGTCCACGCGTT 59.610 50.000 10.22 0.00 0.00 4.84
2520 4320 1.202557 TGTCCTAAAGTCCACGCGTTT 60.203 47.619 10.22 3.10 0.00 3.60
2521 4321 1.458445 GTCCTAAAGTCCACGCGTTTC 59.542 52.381 10.22 2.55 0.00 2.78
2522 4322 1.342174 TCCTAAAGTCCACGCGTTTCT 59.658 47.619 10.22 5.28 0.00 2.52
2523 4323 1.459592 CCTAAAGTCCACGCGTTTCTG 59.540 52.381 10.22 0.00 0.00 3.02
2524 4324 2.132762 CTAAAGTCCACGCGTTTCTGT 58.867 47.619 10.22 6.00 0.00 3.41
2525 4325 1.375551 AAAGTCCACGCGTTTCTGTT 58.624 45.000 10.22 0.00 0.00 3.16
2526 4326 0.935196 AAGTCCACGCGTTTCTGTTC 59.065 50.000 10.22 0.00 0.00 3.18
2527 4327 0.878961 AGTCCACGCGTTTCTGTTCC 60.879 55.000 10.22 0.00 0.00 3.62
2528 4328 1.595929 TCCACGCGTTTCTGTTCCC 60.596 57.895 10.22 0.00 0.00 3.97
2529 4329 1.890041 CCACGCGTTTCTGTTCCCA 60.890 57.895 10.22 0.00 0.00 4.37
2530 4330 1.278637 CACGCGTTTCTGTTCCCAC 59.721 57.895 10.22 0.00 0.00 4.61
2531 4331 1.153329 ACGCGTTTCTGTTCCCACA 60.153 52.632 5.58 0.00 0.00 4.17
2539 4339 2.621763 CTGTTCCCACAGTGTCTGC 58.378 57.895 0.00 0.00 44.96 4.26
2540 4340 0.107456 CTGTTCCCACAGTGTCTGCT 59.893 55.000 0.00 0.00 44.96 4.24
2541 4341 0.546122 TGTTCCCACAGTGTCTGCTT 59.454 50.000 0.00 0.00 34.37 3.91
2542 4342 1.230324 GTTCCCACAGTGTCTGCTTC 58.770 55.000 0.00 0.00 34.37 3.86
2543 4343 1.131638 TTCCCACAGTGTCTGCTTCT 58.868 50.000 0.00 0.00 34.37 2.85
2544 4344 1.131638 TCCCACAGTGTCTGCTTCTT 58.868 50.000 0.00 0.00 34.37 2.52
2545 4345 1.070758 TCCCACAGTGTCTGCTTCTTC 59.929 52.381 0.00 0.00 34.37 2.87
2546 4346 1.071385 CCCACAGTGTCTGCTTCTTCT 59.929 52.381 0.00 0.00 34.37 2.85
2547 4347 2.300152 CCCACAGTGTCTGCTTCTTCTA 59.700 50.000 0.00 0.00 34.37 2.10
2548 4348 3.055530 CCCACAGTGTCTGCTTCTTCTAT 60.056 47.826 0.00 0.00 34.37 1.98
2549 4349 4.564406 CCCACAGTGTCTGCTTCTTCTATT 60.564 45.833 0.00 0.00 34.37 1.73
2550 4350 4.629200 CCACAGTGTCTGCTTCTTCTATTC 59.371 45.833 0.00 0.00 34.37 1.75
2551 4351 4.325741 CACAGTGTCTGCTTCTTCTATTCG 59.674 45.833 0.00 0.00 34.37 3.34
2552 4352 4.218635 ACAGTGTCTGCTTCTTCTATTCGA 59.781 41.667 0.00 0.00 34.37 3.71
2553 4353 4.560819 CAGTGTCTGCTTCTTCTATTCGAC 59.439 45.833 0.00 0.00 0.00 4.20
2554 4354 4.218635 AGTGTCTGCTTCTTCTATTCGACA 59.781 41.667 0.00 0.00 0.00 4.35
2555 4355 4.560819 GTGTCTGCTTCTTCTATTCGACAG 59.439 45.833 0.00 0.00 31.64 3.51
2556 4356 3.549873 GTCTGCTTCTTCTATTCGACAGC 59.450 47.826 0.00 0.00 0.00 4.40
2557 4357 3.193479 TCTGCTTCTTCTATTCGACAGCA 59.807 43.478 0.00 0.00 0.00 4.41
2558 4358 3.254060 TGCTTCTTCTATTCGACAGCAC 58.746 45.455 0.00 0.00 0.00 4.40
2559 4359 2.280183 GCTTCTTCTATTCGACAGCACG 59.720 50.000 0.00 0.00 0.00 5.34
2560 4360 3.759418 CTTCTTCTATTCGACAGCACGA 58.241 45.455 0.00 0.00 40.55 4.35
2561 4361 3.406728 TCTTCTATTCGACAGCACGAG 57.593 47.619 0.00 0.00 43.04 4.18
2562 4362 1.849219 CTTCTATTCGACAGCACGAGC 59.151 52.381 0.00 0.00 43.04 5.03
2573 4373 2.906047 GCACGAGCTCAACTCAACT 58.094 52.632 15.40 0.00 46.63 3.16
2574 4374 2.065993 GCACGAGCTCAACTCAACTA 57.934 50.000 15.40 0.00 46.63 2.24
2575 4375 2.404215 GCACGAGCTCAACTCAACTAA 58.596 47.619 15.40 0.00 46.63 2.24
2576 4376 2.155924 GCACGAGCTCAACTCAACTAAC 59.844 50.000 15.40 0.00 46.63 2.34
2577 4377 3.381045 CACGAGCTCAACTCAACTAACA 58.619 45.455 15.40 0.00 46.63 2.41
2578 4378 3.182572 CACGAGCTCAACTCAACTAACAC 59.817 47.826 15.40 0.00 46.63 3.32
2579 4379 2.731976 CGAGCTCAACTCAACTAACACC 59.268 50.000 15.40 0.00 46.63 4.16
2580 4380 3.067833 GAGCTCAACTCAACTAACACCC 58.932 50.000 9.40 0.00 45.49 4.61
2581 4381 1.798813 GCTCAACTCAACTAACACCCG 59.201 52.381 0.00 0.00 0.00 5.28
2582 4382 1.798813 CTCAACTCAACTAACACCCGC 59.201 52.381 0.00 0.00 0.00 6.13
2583 4383 0.872388 CAACTCAACTAACACCCGCC 59.128 55.000 0.00 0.00 0.00 6.13
2584 4384 0.470766 AACTCAACTAACACCCGCCA 59.529 50.000 0.00 0.00 0.00 5.69
2585 4385 0.470766 ACTCAACTAACACCCGCCAA 59.529 50.000 0.00 0.00 0.00 4.52
2586 4386 0.872388 CTCAACTAACACCCGCCAAC 59.128 55.000 0.00 0.00 0.00 3.77
2587 4387 0.535553 TCAACTAACACCCGCCAACC 60.536 55.000 0.00 0.00 0.00 3.77
2588 4388 0.820074 CAACTAACACCCGCCAACCA 60.820 55.000 0.00 0.00 0.00 3.67
2589 4389 0.820482 AACTAACACCCGCCAACCAC 60.820 55.000 0.00 0.00 0.00 4.16
2590 4390 1.969589 CTAACACCCGCCAACCACC 60.970 63.158 0.00 0.00 0.00 4.61
2591 4391 2.406002 CTAACACCCGCCAACCACCT 62.406 60.000 0.00 0.00 0.00 4.00
2592 4392 1.126329 TAACACCCGCCAACCACCTA 61.126 55.000 0.00 0.00 0.00 3.08
2593 4393 1.997256 AACACCCGCCAACCACCTAA 61.997 55.000 0.00 0.00 0.00 2.69
2594 4394 1.969589 CACCCGCCAACCACCTAAC 60.970 63.158 0.00 0.00 0.00 2.34
2595 4395 2.151388 ACCCGCCAACCACCTAACT 61.151 57.895 0.00 0.00 0.00 2.24
2596 4396 1.376812 CCCGCCAACCACCTAACTC 60.377 63.158 0.00 0.00 0.00 3.01
2597 4397 1.373435 CCGCCAACCACCTAACTCA 59.627 57.895 0.00 0.00 0.00 3.41
2598 4398 0.673644 CCGCCAACCACCTAACTCAG 60.674 60.000 0.00 0.00 0.00 3.35
2599 4399 0.034896 CGCCAACCACCTAACTCAGT 59.965 55.000 0.00 0.00 0.00 3.41
2600 4400 1.542547 CGCCAACCACCTAACTCAGTT 60.543 52.381 0.00 0.00 0.00 3.16
2601 4401 2.289195 CGCCAACCACCTAACTCAGTTA 60.289 50.000 0.00 0.00 0.00 2.24
2602 4402 3.746940 GCCAACCACCTAACTCAGTTAA 58.253 45.455 0.00 0.00 0.00 2.01
2603 4403 4.139038 GCCAACCACCTAACTCAGTTAAA 58.861 43.478 0.00 0.00 0.00 1.52
2604 4404 4.765339 GCCAACCACCTAACTCAGTTAAAT 59.235 41.667 0.00 0.00 0.00 1.40
2605 4405 5.335661 GCCAACCACCTAACTCAGTTAAATG 60.336 44.000 0.00 0.00 0.00 2.32
2606 4406 5.335661 CCAACCACCTAACTCAGTTAAATGC 60.336 44.000 0.00 0.00 0.00 3.56
2607 4407 4.980573 ACCACCTAACTCAGTTAAATGCA 58.019 39.130 0.00 0.00 0.00 3.96
2608 4408 4.760204 ACCACCTAACTCAGTTAAATGCAC 59.240 41.667 0.00 0.00 0.00 4.57
2609 4409 5.003804 CCACCTAACTCAGTTAAATGCACT 58.996 41.667 0.00 0.00 0.00 4.40
2610 4410 5.106555 CCACCTAACTCAGTTAAATGCACTG 60.107 44.000 0.00 0.00 42.74 3.66
2611 4411 5.700832 CACCTAACTCAGTTAAATGCACTGA 59.299 40.000 0.00 4.15 46.81 3.41
2627 4427 3.291584 CACTGATGCTACTAGTCCTCCA 58.708 50.000 0.00 0.00 0.00 3.86
2628 4428 3.701542 CACTGATGCTACTAGTCCTCCAA 59.298 47.826 0.00 0.00 0.00 3.53
2629 4429 3.702045 ACTGATGCTACTAGTCCTCCAAC 59.298 47.826 0.00 0.00 0.00 3.77
2630 4430 2.688446 TGATGCTACTAGTCCTCCAACG 59.312 50.000 0.00 0.00 0.00 4.10
2631 4431 1.471119 TGCTACTAGTCCTCCAACGG 58.529 55.000 0.00 0.00 0.00 4.44
2632 4432 1.272313 TGCTACTAGTCCTCCAACGGT 60.272 52.381 0.00 0.00 0.00 4.83
2633 4433 1.404748 GCTACTAGTCCTCCAACGGTC 59.595 57.143 0.00 0.00 0.00 4.79
2634 4434 2.022934 CTACTAGTCCTCCAACGGTCC 58.977 57.143 0.00 0.00 0.00 4.46
2635 4435 0.614134 ACTAGTCCTCCAACGGTCCC 60.614 60.000 0.00 0.00 0.00 4.46
2636 4436 1.305549 TAGTCCTCCAACGGTCCCC 60.306 63.158 0.00 0.00 0.00 4.81
2637 4437 1.807771 TAGTCCTCCAACGGTCCCCT 61.808 60.000 0.00 0.00 0.00 4.79
2638 4438 2.284405 TCCTCCAACGGTCCCCTC 60.284 66.667 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.586618 AGAGGAGATGAGAGGTGCTTTTT 59.413 43.478 0.00 0.00 0.00 1.94
11 12 3.180507 AGAGGAGATGAGAGGTGCTTTT 58.819 45.455 0.00 0.00 0.00 2.27
12 13 2.765699 GAGAGGAGATGAGAGGTGCTTT 59.234 50.000 0.00 0.00 0.00 3.51
13 14 2.024080 AGAGAGGAGATGAGAGGTGCTT 60.024 50.000 0.00 0.00 0.00 3.91
14 15 1.570501 AGAGAGGAGATGAGAGGTGCT 59.429 52.381 0.00 0.00 0.00 4.40
15 16 1.682854 CAGAGAGGAGATGAGAGGTGC 59.317 57.143 0.00 0.00 0.00 5.01
16 17 1.682854 GCAGAGAGGAGATGAGAGGTG 59.317 57.143 0.00 0.00 0.00 4.00
17 18 1.287442 TGCAGAGAGGAGATGAGAGGT 59.713 52.381 0.00 0.00 0.00 3.85
18 19 1.682854 GTGCAGAGAGGAGATGAGAGG 59.317 57.143 0.00 0.00 0.00 3.69
19 20 1.682854 GGTGCAGAGAGGAGATGAGAG 59.317 57.143 0.00 0.00 0.00 3.20
20 21 1.687682 GGGTGCAGAGAGGAGATGAGA 60.688 57.143 0.00 0.00 0.00 3.27
21 22 0.752054 GGGTGCAGAGAGGAGATGAG 59.248 60.000 0.00 0.00 0.00 2.90
22 23 0.041684 TGGGTGCAGAGAGGAGATGA 59.958 55.000 0.00 0.00 0.00 2.92
23 24 0.177604 GTGGGTGCAGAGAGGAGATG 59.822 60.000 0.00 0.00 0.00 2.90
24 25 0.980231 GGTGGGTGCAGAGAGGAGAT 60.980 60.000 0.00 0.00 0.00 2.75
25 26 1.610673 GGTGGGTGCAGAGAGGAGA 60.611 63.158 0.00 0.00 0.00 3.71
26 27 2.664081 GGGTGGGTGCAGAGAGGAG 61.664 68.421 0.00 0.00 0.00 3.69
27 28 2.607750 GGGTGGGTGCAGAGAGGA 60.608 66.667 0.00 0.00 0.00 3.71
28 29 4.087892 CGGGTGGGTGCAGAGAGG 62.088 72.222 0.00 0.00 0.00 3.69
29 30 4.767255 GCGGGTGGGTGCAGAGAG 62.767 72.222 0.00 0.00 0.00 3.20
39 40 4.410400 GAGGACCAAGGCGGGTGG 62.410 72.222 8.65 6.02 42.53 4.61
40 41 4.410400 GGAGGACCAAGGCGGGTG 62.410 72.222 8.65 0.00 42.53 4.61
44 45 3.787001 GAGGGGAGGACCAAGGCG 61.787 72.222 0.00 0.00 42.91 5.52
45 46 2.285743 AGAGGGGAGGACCAAGGC 60.286 66.667 0.00 0.00 42.91 4.35
46 47 0.980231 CAGAGAGGGGAGGACCAAGG 60.980 65.000 0.00 0.00 42.91 3.61
47 48 0.252467 ACAGAGAGGGGAGGACCAAG 60.252 60.000 0.00 0.00 42.91 3.61
48 49 1.089978 TACAGAGAGGGGAGGACCAA 58.910 55.000 0.00 0.00 42.91 3.67
49 50 0.335361 GTACAGAGAGGGGAGGACCA 59.665 60.000 0.00 0.00 42.91 4.02
50 51 0.397394 GGTACAGAGAGGGGAGGACC 60.397 65.000 0.00 0.00 39.11 4.46
51 52 0.335361 TGGTACAGAGAGGGGAGGAC 59.665 60.000 0.00 0.00 0.00 3.85
52 53 0.335361 GTGGTACAGAGAGGGGAGGA 59.665 60.000 0.00 0.00 41.80 3.71
53 54 0.688087 GGTGGTACAGAGAGGGGAGG 60.688 65.000 0.00 0.00 41.80 4.30
54 55 0.041238 TGGTGGTACAGAGAGGGGAG 59.959 60.000 0.00 0.00 41.80 4.30
55 56 0.716591 ATGGTGGTACAGAGAGGGGA 59.283 55.000 0.00 0.00 41.80 4.81
56 57 1.123928 GATGGTGGTACAGAGAGGGG 58.876 60.000 0.00 0.00 41.80 4.79
57 58 1.866015 TGATGGTGGTACAGAGAGGG 58.134 55.000 0.00 0.00 41.80 4.30
58 59 3.801698 CAATGATGGTGGTACAGAGAGG 58.198 50.000 0.00 0.00 41.80 3.69
59 60 3.201290 GCAATGATGGTGGTACAGAGAG 58.799 50.000 0.00 0.00 41.80 3.20
60 61 2.571202 TGCAATGATGGTGGTACAGAGA 59.429 45.455 0.00 0.00 41.80 3.10
61 62 2.679837 GTGCAATGATGGTGGTACAGAG 59.320 50.000 0.00 0.00 41.80 3.35
62 63 2.617788 GGTGCAATGATGGTGGTACAGA 60.618 50.000 0.00 0.00 41.80 3.41
63 64 1.745087 GGTGCAATGATGGTGGTACAG 59.255 52.381 0.00 0.00 41.80 2.74
64 65 1.615651 GGGTGCAATGATGGTGGTACA 60.616 52.381 0.00 0.00 0.00 2.90
65 66 1.102978 GGGTGCAATGATGGTGGTAC 58.897 55.000 0.00 0.00 0.00 3.34
66 67 0.701147 TGGGTGCAATGATGGTGGTA 59.299 50.000 0.00 0.00 0.00 3.25
67 68 0.899717 GTGGGTGCAATGATGGTGGT 60.900 55.000 0.00 0.00 0.00 4.16
68 69 1.606885 GGTGGGTGCAATGATGGTGG 61.607 60.000 0.00 0.00 0.00 4.61
69 70 1.606885 GGGTGGGTGCAATGATGGTG 61.607 60.000 0.00 0.00 0.00 4.17
70 71 1.305213 GGGTGGGTGCAATGATGGT 60.305 57.895 0.00 0.00 0.00 3.55
71 72 1.305129 TGGGTGGGTGCAATGATGG 60.305 57.895 0.00 0.00 0.00 3.51
72 73 1.606885 GGTGGGTGGGTGCAATGATG 61.607 60.000 0.00 0.00 0.00 3.07
73 74 1.305213 GGTGGGTGGGTGCAATGAT 60.305 57.895 0.00 0.00 0.00 2.45
74 75 2.117206 GGTGGGTGGGTGCAATGA 59.883 61.111 0.00 0.00 0.00 2.57
75 76 2.996734 GGGTGGGTGGGTGCAATG 60.997 66.667 0.00 0.00 0.00 2.82
76 77 4.315264 GGGGTGGGTGGGTGCAAT 62.315 66.667 0.00 0.00 0.00 3.56
79 80 4.233558 AAAGGGGTGGGTGGGTGC 62.234 66.667 0.00 0.00 0.00 5.01
80 81 2.117423 GAAAGGGGTGGGTGGGTG 59.883 66.667 0.00 0.00 0.00 4.61
81 82 3.190391 GGAAAGGGGTGGGTGGGT 61.190 66.667 0.00 0.00 0.00 4.51
82 83 2.478803 AAGGAAAGGGGTGGGTGGG 61.479 63.158 0.00 0.00 0.00 4.61
83 84 1.228862 CAAGGAAAGGGGTGGGTGG 60.229 63.158 0.00 0.00 0.00 4.61
84 85 0.105709 AACAAGGAAAGGGGTGGGTG 60.106 55.000 0.00 0.00 0.00 4.61
85 86 0.187606 GAACAAGGAAAGGGGTGGGT 59.812 55.000 0.00 0.00 0.00 4.51
86 87 0.541998 GGAACAAGGAAAGGGGTGGG 60.542 60.000 0.00 0.00 0.00 4.61
87 88 0.893727 CGGAACAAGGAAAGGGGTGG 60.894 60.000 0.00 0.00 0.00 4.61
88 89 0.179001 ACGGAACAAGGAAAGGGGTG 60.179 55.000 0.00 0.00 0.00 4.61
89 90 0.554305 AACGGAACAAGGAAAGGGGT 59.446 50.000 0.00 0.00 0.00 4.95
90 91 0.958822 CAACGGAACAAGGAAAGGGG 59.041 55.000 0.00 0.00 0.00 4.79
91 92 0.958822 CCAACGGAACAAGGAAAGGG 59.041 55.000 0.00 0.00 0.00 3.95
92 93 1.336755 CACCAACGGAACAAGGAAAGG 59.663 52.381 0.00 0.00 0.00 3.11
93 94 2.021457 ACACCAACGGAACAAGGAAAG 58.979 47.619 0.00 0.00 0.00 2.62
94 95 1.746220 CACACCAACGGAACAAGGAAA 59.254 47.619 0.00 0.00 0.00 3.13
95 96 1.384525 CACACCAACGGAACAAGGAA 58.615 50.000 0.00 0.00 0.00 3.36
96 97 1.098712 GCACACCAACGGAACAAGGA 61.099 55.000 0.00 0.00 0.00 3.36
97 98 1.101049 AGCACACCAACGGAACAAGG 61.101 55.000 0.00 0.00 0.00 3.61
98 99 0.738389 AAGCACACCAACGGAACAAG 59.262 50.000 0.00 0.00 0.00 3.16
99 100 0.453793 CAAGCACACCAACGGAACAA 59.546 50.000 0.00 0.00 0.00 2.83
104 105 1.711060 AACGACAAGCACACCAACGG 61.711 55.000 0.00 0.00 0.00 4.44
108 109 0.813610 CTCCAACGACAAGCACACCA 60.814 55.000 0.00 0.00 0.00 4.17
118 119 1.592223 CACTCCCTCCTCCAACGAC 59.408 63.158 0.00 0.00 0.00 4.34
124 125 2.569218 TACTCCGCACTCCCTCCTCC 62.569 65.000 0.00 0.00 0.00 4.30
169 170 8.304596 GGATCCACTGTAATTAATACTGATCGA 58.695 37.037 6.95 0.00 37.03 3.59
171 172 9.950496 ATGGATCCACTGTAATTAATACTGATC 57.050 33.333 18.99 0.00 37.03 2.92
176 177 9.349713 TCCAAATGGATCCACTGTAATTAATAC 57.650 33.333 18.99 0.00 39.78 1.89
250 253 5.969423 TGTCGTCCCGTAGAAGAAAATATT 58.031 37.500 0.00 0.00 34.60 1.28
253 256 3.947910 TGTCGTCCCGTAGAAGAAAAT 57.052 42.857 0.00 0.00 34.60 1.82
280 283 2.777972 CCGCGACCCCGATCTACAA 61.778 63.158 8.23 0.00 38.22 2.41
297 301 0.106318 ATGCAGATCAGGAAAGGCCC 60.106 55.000 0.00 0.00 37.37 5.80
300 304 2.609427 TCGATGCAGATCAGGAAAGG 57.391 50.000 0.00 0.00 0.00 3.11
303 307 2.697229 AGTCATCGATGCAGATCAGGAA 59.303 45.455 20.81 0.00 0.00 3.36
309 313 1.269988 CGGGAAGTCATCGATGCAGAT 60.270 52.381 20.81 6.53 0.00 2.90
330 334 5.911752 TCAGGATCTTGAAGAAGCTATGAC 58.088 41.667 4.83 0.00 0.00 3.06
336 340 8.299570 TGTTTAAATTCAGGATCTTGAAGAAGC 58.700 33.333 22.73 17.66 40.16 3.86
342 346 9.748708 CAAACTTGTTTAAATTCAGGATCTTGA 57.251 29.630 2.91 2.91 0.00 3.02
345 349 7.955918 AGCAAACTTGTTTAAATTCAGGATCT 58.044 30.769 0.00 0.00 0.00 2.75
367 371 2.586245 CTCCGCCTCATTGGAGCA 59.414 61.111 0.00 0.00 44.83 4.26
388 392 2.635229 ATAGCTTGACGCCGCCTCTG 62.635 60.000 0.00 0.00 40.39 3.35
389 393 2.427245 ATAGCTTGACGCCGCCTCT 61.427 57.895 0.00 0.00 40.39 3.69
390 394 2.107141 ATAGCTTGACGCCGCCTC 59.893 61.111 0.00 0.00 40.39 4.70
391 395 2.202932 CATAGCTTGACGCCGCCT 60.203 61.111 0.00 0.00 40.39 5.52
392 396 3.941836 GCATAGCTTGACGCCGCC 61.942 66.667 0.00 0.00 40.39 6.13
393 397 2.875786 GAGCATAGCTTGACGCCGC 61.876 63.158 0.00 0.00 39.88 6.53
394 398 1.519234 TGAGCATAGCTTGACGCCG 60.519 57.895 0.00 0.00 39.88 6.46
395 399 1.756375 CGTGAGCATAGCTTGACGCC 61.756 60.000 10.24 0.00 39.88 5.68
396 400 1.633171 CGTGAGCATAGCTTGACGC 59.367 57.895 10.24 0.00 39.88 5.19
397 401 1.756375 GCCGTGAGCATAGCTTGACG 61.756 60.000 14.03 14.03 39.88 4.35
398 402 2.009888 GCCGTGAGCATAGCTTGAC 58.990 57.895 0.00 0.00 39.88 3.18
399 403 4.521075 GCCGTGAGCATAGCTTGA 57.479 55.556 0.00 0.00 39.88 3.02
473 477 7.437862 ACACACCTTTACAAAAACATAGCATTG 59.562 33.333 0.00 0.00 0.00 2.82
478 482 8.696410 ACAAACACACCTTTACAAAAACATAG 57.304 30.769 0.00 0.00 0.00 2.23
483 487 9.194271 GTCTTTACAAACACACCTTTACAAAAA 57.806 29.630 0.00 0.00 0.00 1.94
553 557 8.640291 CGTTTGGCGTATGTTTGTTATTTATTT 58.360 29.630 0.00 0.00 35.54 1.40
576 580 4.282195 TGAAATTTAACTTGATGCCCCGTT 59.718 37.500 0.00 0.00 0.00 4.44
632 636 7.232941 AGTGTAAGTCAAAAAGAGAGCCTAGTA 59.767 37.037 0.00 0.00 0.00 1.82
638 642 5.117897 CGAGAGTGTAAGTCAAAAAGAGAGC 59.882 44.000 0.00 0.00 39.29 4.09
675 679 4.116961 CAAATGCAAGTATGATGCCCTTG 58.883 43.478 0.00 0.00 43.16 3.61
700 706 8.389979 AGGGAGTGATGATGTATGATGATTAT 57.610 34.615 0.00 0.00 0.00 1.28
716 722 4.443457 CCAACATATTCGTGAGGGAGTGAT 60.443 45.833 0.00 0.00 0.00 3.06
722 728 2.158900 AGCTCCAACATATTCGTGAGGG 60.159 50.000 0.00 0.00 0.00 4.30
748 1449 1.537638 ACGCACTGACACAAACAAACA 59.462 42.857 0.00 0.00 0.00 2.83
749 1450 2.256445 ACGCACTGACACAAACAAAC 57.744 45.000 0.00 0.00 0.00 2.93
752 1453 0.449786 CCAACGCACTGACACAAACA 59.550 50.000 0.00 0.00 0.00 2.83
758 1459 2.279851 CGGTCCAACGCACTGACA 60.280 61.111 0.00 0.00 0.00 3.58
762 1463 0.534203 AAATCACGGTCCAACGCACT 60.534 50.000 0.00 0.00 37.37 4.40
764 1465 1.025812 AAAAATCACGGTCCAACGCA 58.974 45.000 0.00 0.00 37.37 5.24
772 1473 5.163733 ACTGTAAACGAACAAAAATCACGGT 60.164 36.000 0.00 0.00 0.00 4.83
774 1475 6.784068 AACTGTAAACGAACAAAAATCACG 57.216 33.333 0.00 0.00 0.00 4.35
775 1476 9.875660 GTTTAACTGTAAACGAACAAAAATCAC 57.124 29.630 0.00 0.00 39.69 3.06
788 1489 8.726988 TCTGCATCCATTAGTTTAACTGTAAAC 58.273 33.333 8.00 1.89 46.43 2.01
793 1494 6.595326 TCTGTCTGCATCCATTAGTTTAACTG 59.405 38.462 8.00 0.00 0.00 3.16
795 1496 6.985188 TCTGTCTGCATCCATTAGTTTAAC 57.015 37.500 0.00 0.00 0.00 2.01
804 1505 4.831155 CCCATTTTATCTGTCTGCATCCAT 59.169 41.667 0.00 0.00 0.00 3.41
809 1510 3.270027 CGACCCATTTTATCTGTCTGCA 58.730 45.455 0.00 0.00 0.00 4.41
812 1513 2.741878 CGGCGACCCATTTTATCTGTCT 60.742 50.000 0.00 0.00 0.00 3.41
829 1530 2.709475 GCTAACTCCAATGCGGCG 59.291 61.111 0.51 0.51 33.14 6.46
844 1545 1.228675 CCAGCAAGTTCCTTGGGCT 60.229 57.895 6.15 0.00 41.31 5.19
896 1597 2.657143 AGAGAGATCCACTTCCGGTAC 58.343 52.381 0.00 0.00 0.00 3.34
966 1672 7.147794 GGATTTACTTATTTTTGGTCGGGGAAT 60.148 37.037 0.00 0.00 0.00 3.01
1119 1833 2.665000 CGGAGCATCACCACCACT 59.335 61.111 0.00 0.00 36.25 4.00
1234 1948 1.303643 GGTTGTTGGCCCTGAGGAG 60.304 63.158 0.00 0.00 33.47 3.69
1328 2069 0.523546 CAGGTCGAACTCGGTGATCG 60.524 60.000 0.00 3.73 41.43 3.69
1623 2388 2.135903 TTGATCACACATGGGCCGGT 62.136 55.000 1.90 0.00 0.00 5.28
1722 2550 1.135489 TCGACGCAAATAACTCGAGCT 60.135 47.619 13.61 2.05 31.71 4.09
1729 2557 1.856014 GCAGGCATCGACGCAAATAAC 60.856 52.381 5.59 0.00 0.00 1.89
1730 2558 0.376852 GCAGGCATCGACGCAAATAA 59.623 50.000 5.59 0.00 0.00 1.40
1731 2559 1.436195 GGCAGGCATCGACGCAAATA 61.436 55.000 5.59 0.00 0.00 1.40
1732 2560 2.764314 GGCAGGCATCGACGCAAAT 61.764 57.895 5.59 0.00 0.00 2.32
1733 2561 3.430862 GGCAGGCATCGACGCAAA 61.431 61.111 5.59 0.00 0.00 3.68
1734 2562 3.974835 ATGGCAGGCATCGACGCAA 62.975 57.895 5.59 0.00 0.00 4.85
1735 2563 4.471908 ATGGCAGGCATCGACGCA 62.472 61.111 5.59 0.00 0.00 5.24
1736 2564 3.945434 CATGGCAGGCATCGACGC 61.945 66.667 6.47 0.00 0.00 5.19
1737 2565 3.945434 GCATGGCAGGCATCGACG 61.945 66.667 20.53 0.00 0.00 5.12
1802 3597 6.090898 GCAGGCAGGTAAATATATGTTCGTAG 59.909 42.308 0.00 0.00 0.00 3.51
1809 3606 3.935203 CTCGGCAGGCAGGTAAATATATG 59.065 47.826 0.00 0.00 0.00 1.78
1876 3673 6.632834 CGATTGCAACTTATTACACCAATAGC 59.367 38.462 0.00 0.00 30.75 2.97
1937 3734 1.691976 TCGTGGGACCCATGATACATC 59.308 52.381 28.68 7.35 43.70 3.06
1941 3738 1.119684 CACTCGTGGGACCCATGATA 58.880 55.000 31.56 14.04 46.79 2.15
2009 3806 7.537596 AACAATGTATCCACAGGAAAATTCA 57.462 32.000 0.00 0.00 38.30 2.57
2019 3816 6.707290 AGTACTGCTTAACAATGTATCCACA 58.293 36.000 0.00 0.00 39.52 4.17
2031 3828 7.916552 CCATAATTGGTGTAGTACTGCTTAAC 58.083 38.462 12.42 2.19 38.30 2.01
2053 3850 9.206870 GTAAACATCAATCATTCACAAAACCAT 57.793 29.630 0.00 0.00 0.00 3.55
2105 3903 3.644966 TTATTCAGCCTTTGTCCGGAT 57.355 42.857 7.81 0.00 0.00 4.18
2107 3905 2.817258 TGTTTATTCAGCCTTTGTCCGG 59.183 45.455 0.00 0.00 0.00 5.14
2231 4030 9.949174 GTCAAATATTGTTTTTGGCAGATTTTT 57.051 25.926 0.00 0.00 38.30 1.94
2237 4037 6.523676 AACGTCAAATATTGTTTTTGGCAG 57.476 33.333 0.00 0.00 38.32 4.85
2298 4098 6.183360 CCAATGCCTACATAATTGTGCTACAA 60.183 38.462 1.57 4.56 37.82 2.41
2342 4142 3.066291 ACCCATCGTGCAAGTAATTCA 57.934 42.857 0.00 0.00 0.00 2.57
2343 4143 4.434713 AAACCCATCGTGCAAGTAATTC 57.565 40.909 0.00 0.00 0.00 2.17
2344 4144 4.398044 CCTAAACCCATCGTGCAAGTAATT 59.602 41.667 0.00 0.00 0.00 1.40
2345 4145 3.945285 CCTAAACCCATCGTGCAAGTAAT 59.055 43.478 0.00 0.00 0.00 1.89
2346 4146 3.340034 CCTAAACCCATCGTGCAAGTAA 58.660 45.455 0.00 0.00 0.00 2.24
2347 4147 2.355310 CCCTAAACCCATCGTGCAAGTA 60.355 50.000 0.00 0.00 0.00 2.24
2348 4148 1.613255 CCCTAAACCCATCGTGCAAGT 60.613 52.381 0.00 0.00 0.00 3.16
2349 4149 1.094785 CCCTAAACCCATCGTGCAAG 58.905 55.000 0.00 0.00 0.00 4.01
2350 4150 0.402504 ACCCTAAACCCATCGTGCAA 59.597 50.000 0.00 0.00 0.00 4.08
2351 4151 0.035820 GACCCTAAACCCATCGTGCA 60.036 55.000 0.00 0.00 0.00 4.57
2352 4152 0.252197 AGACCCTAAACCCATCGTGC 59.748 55.000 0.00 0.00 0.00 5.34
2353 4153 3.728845 CATAGACCCTAAACCCATCGTG 58.271 50.000 0.00 0.00 0.00 4.35
2354 4154 2.104281 GCATAGACCCTAAACCCATCGT 59.896 50.000 0.00 0.00 0.00 3.73
2355 4155 2.368875 AGCATAGACCCTAAACCCATCG 59.631 50.000 0.00 0.00 0.00 3.84
2356 4156 5.763876 ATAGCATAGACCCTAAACCCATC 57.236 43.478 0.00 0.00 0.00 3.51
2357 4157 5.187186 CGTATAGCATAGACCCTAAACCCAT 59.813 44.000 0.00 0.00 26.27 4.00
2358 4158 4.525487 CGTATAGCATAGACCCTAAACCCA 59.475 45.833 0.00 0.00 26.27 4.51
2359 4159 4.768968 TCGTATAGCATAGACCCTAAACCC 59.231 45.833 0.00 0.00 26.27 4.11
2360 4160 5.972107 TCGTATAGCATAGACCCTAAACC 57.028 43.478 0.00 0.00 26.27 3.27
2361 4161 8.709646 CAATTTCGTATAGCATAGACCCTAAAC 58.290 37.037 0.00 0.00 26.27 2.01
2362 4162 7.386848 GCAATTTCGTATAGCATAGACCCTAAA 59.613 37.037 0.00 0.00 26.27 1.85
2363 4163 6.872020 GCAATTTCGTATAGCATAGACCCTAA 59.128 38.462 0.00 0.00 26.27 2.69
2364 4164 6.014925 TGCAATTTCGTATAGCATAGACCCTA 60.015 38.462 0.00 0.00 26.27 3.53
2365 4165 5.221641 TGCAATTTCGTATAGCATAGACCCT 60.222 40.000 0.00 0.00 26.27 4.34
2366 4166 4.994852 TGCAATTTCGTATAGCATAGACCC 59.005 41.667 0.00 0.00 26.27 4.46
2367 4167 6.727824 ATGCAATTTCGTATAGCATAGACC 57.272 37.500 0.00 0.00 43.45 3.85
2371 4171 6.535150 GCTCCTATGCAATTTCGTATAGCATA 59.465 38.462 0.00 0.00 43.45 3.14
2372 4172 5.352569 GCTCCTATGCAATTTCGTATAGCAT 59.647 40.000 0.00 0.00 46.53 3.79
2373 4173 4.690748 GCTCCTATGCAATTTCGTATAGCA 59.309 41.667 0.00 0.00 39.79 3.49
2374 4174 4.690748 TGCTCCTATGCAATTTCGTATAGC 59.309 41.667 0.00 5.44 40.29 2.97
2375 4175 5.928839 AGTGCTCCTATGCAATTTCGTATAG 59.071 40.000 0.00 0.00 45.12 1.31
2376 4176 5.853936 AGTGCTCCTATGCAATTTCGTATA 58.146 37.500 0.00 0.00 45.12 1.47
2377 4177 4.708177 AGTGCTCCTATGCAATTTCGTAT 58.292 39.130 0.00 0.00 45.12 3.06
2378 4178 4.119862 GAGTGCTCCTATGCAATTTCGTA 58.880 43.478 0.00 0.00 45.12 3.43
2379 4179 2.939103 GAGTGCTCCTATGCAATTTCGT 59.061 45.455 0.00 0.00 45.12 3.85
2380 4180 2.033407 CGAGTGCTCCTATGCAATTTCG 60.033 50.000 0.00 0.00 45.12 3.46
2381 4181 2.289002 CCGAGTGCTCCTATGCAATTTC 59.711 50.000 0.00 0.00 45.12 2.17
2382 4182 2.292267 CCGAGTGCTCCTATGCAATTT 58.708 47.619 0.00 0.00 45.12 1.82
2383 4183 1.959042 CCGAGTGCTCCTATGCAATT 58.041 50.000 0.00 0.00 45.12 2.32
2384 4184 0.533755 GCCGAGTGCTCCTATGCAAT 60.534 55.000 0.00 0.00 45.12 3.56
2385 4185 1.153369 GCCGAGTGCTCCTATGCAA 60.153 57.895 0.00 0.00 45.12 4.08
2386 4186 2.501128 GCCGAGTGCTCCTATGCA 59.499 61.111 0.00 0.00 41.05 3.96
2387 4187 2.659897 CGCCGAGTGCTCCTATGC 60.660 66.667 0.00 0.00 38.05 3.14
2388 4188 1.299468 GTCGCCGAGTGCTCCTATG 60.299 63.158 0.00 0.00 38.05 2.23
2389 4189 2.835705 CGTCGCCGAGTGCTCCTAT 61.836 63.158 0.00 0.00 38.05 2.57
2390 4190 3.506096 CGTCGCCGAGTGCTCCTA 61.506 66.667 0.00 0.00 38.05 2.94
2407 4207 4.115199 AGGATTCCGGTGGGCAGC 62.115 66.667 0.00 0.00 0.00 5.25
2408 4208 2.124570 CAGGATTCCGGTGGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
2409 4209 4.424711 GCAGGATTCCGGTGGGCA 62.425 66.667 0.00 0.00 0.00 5.36
2411 4211 4.506255 GGGCAGGATTCCGGTGGG 62.506 72.222 0.00 0.00 0.00 4.61
2412 4212 3.727258 TGGGCAGGATTCCGGTGG 61.727 66.667 0.00 0.00 0.00 4.61
2413 4213 2.438434 GTGGGCAGGATTCCGGTG 60.438 66.667 0.00 0.00 0.00 4.94
2414 4214 3.728373 GGTGGGCAGGATTCCGGT 61.728 66.667 0.00 0.00 0.00 5.28
2415 4215 4.506255 GGGTGGGCAGGATTCCGG 62.506 72.222 0.00 0.00 0.00 5.14
2416 4216 3.727258 TGGGTGGGCAGGATTCCG 61.727 66.667 0.00 0.00 0.00 4.30
2417 4217 2.043953 GTGGGTGGGCAGGATTCC 60.044 66.667 0.00 0.00 0.00 3.01
2418 4218 0.967380 CAAGTGGGTGGGCAGGATTC 60.967 60.000 0.00 0.00 0.00 2.52
2419 4219 1.077265 CAAGTGGGTGGGCAGGATT 59.923 57.895 0.00 0.00 0.00 3.01
2420 4220 2.142292 GACAAGTGGGTGGGCAGGAT 62.142 60.000 0.00 0.00 0.00 3.24
2421 4221 2.776526 ACAAGTGGGTGGGCAGGA 60.777 61.111 0.00 0.00 0.00 3.86
2422 4222 2.282462 GACAAGTGGGTGGGCAGG 60.282 66.667 0.00 0.00 0.00 4.85
2423 4223 1.302832 GAGACAAGTGGGTGGGCAG 60.303 63.158 0.00 0.00 0.00 4.85
2424 4224 2.836154 GAGACAAGTGGGTGGGCA 59.164 61.111 0.00 0.00 0.00 5.36
2425 4225 2.358737 CGAGACAAGTGGGTGGGC 60.359 66.667 0.00 0.00 0.00 5.36
2426 4226 2.347490 CCGAGACAAGTGGGTGGG 59.653 66.667 0.00 0.00 0.00 4.61
2427 4227 1.553690 ATCCCGAGACAAGTGGGTGG 61.554 60.000 0.00 0.00 43.75 4.61
2428 4228 0.108138 GATCCCGAGACAAGTGGGTG 60.108 60.000 0.00 0.00 43.75 4.61
2429 4229 0.252284 AGATCCCGAGACAAGTGGGT 60.252 55.000 0.00 0.00 43.75 4.51
2430 4230 0.176680 CAGATCCCGAGACAAGTGGG 59.823 60.000 0.00 0.00 44.75 4.61
2431 4231 0.460987 GCAGATCCCGAGACAAGTGG 60.461 60.000 0.00 0.00 0.00 4.00
2432 4232 0.247460 TGCAGATCCCGAGACAAGTG 59.753 55.000 0.00 0.00 0.00 3.16
2433 4233 0.976641 TTGCAGATCCCGAGACAAGT 59.023 50.000 0.00 0.00 0.00 3.16
2434 4234 2.208431 GATTGCAGATCCCGAGACAAG 58.792 52.381 0.00 0.00 0.00 3.16
2435 4235 1.554617 TGATTGCAGATCCCGAGACAA 59.445 47.619 6.47 0.00 0.00 3.18
2436 4236 1.134699 GTGATTGCAGATCCCGAGACA 60.135 52.381 6.47 0.00 0.00 3.41
2437 4237 1.137872 AGTGATTGCAGATCCCGAGAC 59.862 52.381 6.47 0.00 0.00 3.36
2438 4238 1.489481 AGTGATTGCAGATCCCGAGA 58.511 50.000 6.47 0.00 0.00 4.04
2439 4239 3.674528 ATAGTGATTGCAGATCCCGAG 57.325 47.619 6.47 0.00 0.00 4.63
2440 4240 5.745312 AATATAGTGATTGCAGATCCCGA 57.255 39.130 6.47 0.00 0.00 5.14
2441 4241 5.521735 GCTAATATAGTGATTGCAGATCCCG 59.478 44.000 6.47 0.00 0.00 5.14
2442 4242 5.819901 GGCTAATATAGTGATTGCAGATCCC 59.180 44.000 6.47 0.00 0.00 3.85
2443 4243 6.314896 GTGGCTAATATAGTGATTGCAGATCC 59.685 42.308 6.47 0.00 0.00 3.36
2444 4244 6.875726 TGTGGCTAATATAGTGATTGCAGATC 59.124 38.462 0.00 0.00 0.00 2.75
2445 4245 6.652481 GTGTGGCTAATATAGTGATTGCAGAT 59.348 38.462 0.00 0.00 0.00 2.90
2446 4246 5.991606 GTGTGGCTAATATAGTGATTGCAGA 59.008 40.000 0.00 0.00 0.00 4.26
2447 4247 5.180117 GGTGTGGCTAATATAGTGATTGCAG 59.820 44.000 0.00 0.00 0.00 4.41
2448 4248 5.063204 GGTGTGGCTAATATAGTGATTGCA 58.937 41.667 0.00 0.00 0.00 4.08
2449 4249 4.152402 CGGTGTGGCTAATATAGTGATTGC 59.848 45.833 0.00 0.00 0.00 3.56
2450 4250 5.297547 ACGGTGTGGCTAATATAGTGATTG 58.702 41.667 0.00 0.00 0.00 2.67
2451 4251 5.546621 ACGGTGTGGCTAATATAGTGATT 57.453 39.130 0.00 0.00 0.00 2.57
2452 4252 6.852420 ATACGGTGTGGCTAATATAGTGAT 57.148 37.500 0.00 0.00 0.00 3.06
2453 4253 6.492429 AGAATACGGTGTGGCTAATATAGTGA 59.508 38.462 0.00 0.00 0.00 3.41
2454 4254 6.688578 AGAATACGGTGTGGCTAATATAGTG 58.311 40.000 0.00 0.00 0.00 2.74
2455 4255 6.492429 TGAGAATACGGTGTGGCTAATATAGT 59.508 38.462 0.00 0.00 0.00 2.12
2456 4256 6.920817 TGAGAATACGGTGTGGCTAATATAG 58.079 40.000 0.00 0.00 0.00 1.31
2457 4257 6.904463 TGAGAATACGGTGTGGCTAATATA 57.096 37.500 0.00 0.00 0.00 0.86
2458 4258 5.801531 TGAGAATACGGTGTGGCTAATAT 57.198 39.130 0.00 0.00 0.00 1.28
2459 4259 5.801531 ATGAGAATACGGTGTGGCTAATA 57.198 39.130 0.00 0.00 0.00 0.98
2460 4260 4.689612 ATGAGAATACGGTGTGGCTAAT 57.310 40.909 0.00 0.00 0.00 1.73
2461 4261 4.481368 AATGAGAATACGGTGTGGCTAA 57.519 40.909 0.00 0.00 0.00 3.09
2462 4262 4.188462 CAAATGAGAATACGGTGTGGCTA 58.812 43.478 0.00 0.00 0.00 3.93
2463 4263 3.009723 CAAATGAGAATACGGTGTGGCT 58.990 45.455 0.00 0.00 0.00 4.75
2464 4264 2.477863 GCAAATGAGAATACGGTGTGGC 60.478 50.000 0.00 0.00 0.00 5.01
2465 4265 3.009723 AGCAAATGAGAATACGGTGTGG 58.990 45.455 0.00 0.00 0.00 4.17
2466 4266 4.685169 AAGCAAATGAGAATACGGTGTG 57.315 40.909 0.00 0.00 0.00 3.82
2467 4267 5.460646 CAAAAGCAAATGAGAATACGGTGT 58.539 37.500 0.00 0.00 0.00 4.16
2468 4268 4.858692 CCAAAAGCAAATGAGAATACGGTG 59.141 41.667 0.00 0.00 0.00 4.94
2469 4269 4.618227 GCCAAAAGCAAATGAGAATACGGT 60.618 41.667 0.00 0.00 42.97 4.83
2470 4270 3.859386 GCCAAAAGCAAATGAGAATACGG 59.141 43.478 0.00 0.00 42.97 4.02
2484 4284 1.666189 GGACAGATACGAGCCAAAAGC 59.334 52.381 0.00 0.00 44.25 3.51
2485 4285 3.252974 AGGACAGATACGAGCCAAAAG 57.747 47.619 0.00 0.00 0.00 2.27
2486 4286 4.811969 TTAGGACAGATACGAGCCAAAA 57.188 40.909 0.00 0.00 0.00 2.44
2487 4287 4.222145 ACTTTAGGACAGATACGAGCCAAA 59.778 41.667 0.00 0.00 0.00 3.28
2488 4288 3.767673 ACTTTAGGACAGATACGAGCCAA 59.232 43.478 0.00 0.00 0.00 4.52
2489 4289 3.362706 ACTTTAGGACAGATACGAGCCA 58.637 45.455 0.00 0.00 0.00 4.75
2490 4290 3.243468 GGACTTTAGGACAGATACGAGCC 60.243 52.174 0.00 0.00 0.00 4.70
2491 4291 3.380637 TGGACTTTAGGACAGATACGAGC 59.619 47.826 0.00 0.00 0.00 5.03
2492 4292 4.496010 CGTGGACTTTAGGACAGATACGAG 60.496 50.000 0.00 0.00 0.00 4.18
2493 4293 3.376234 CGTGGACTTTAGGACAGATACGA 59.624 47.826 0.00 0.00 0.00 3.43
2494 4294 3.692576 CGTGGACTTTAGGACAGATACG 58.307 50.000 0.00 0.00 0.00 3.06
2495 4295 3.445857 GCGTGGACTTTAGGACAGATAC 58.554 50.000 0.00 0.00 0.00 2.24
2496 4296 2.098607 CGCGTGGACTTTAGGACAGATA 59.901 50.000 0.00 0.00 0.00 1.98
2497 4297 1.135083 CGCGTGGACTTTAGGACAGAT 60.135 52.381 0.00 0.00 0.00 2.90
2498 4298 0.242825 CGCGTGGACTTTAGGACAGA 59.757 55.000 0.00 0.00 0.00 3.41
2499 4299 0.038526 ACGCGTGGACTTTAGGACAG 60.039 55.000 12.93 0.00 0.00 3.51
2500 4300 0.390124 AACGCGTGGACTTTAGGACA 59.610 50.000 14.98 0.00 0.00 4.02
2501 4301 1.458445 GAAACGCGTGGACTTTAGGAC 59.542 52.381 14.98 0.00 0.00 3.85
2502 4302 1.342174 AGAAACGCGTGGACTTTAGGA 59.658 47.619 14.98 0.00 0.00 2.94
2503 4303 1.459592 CAGAAACGCGTGGACTTTAGG 59.540 52.381 14.98 0.00 0.00 2.69
2504 4304 2.132762 ACAGAAACGCGTGGACTTTAG 58.867 47.619 14.98 2.53 0.00 1.85
2505 4305 2.228138 ACAGAAACGCGTGGACTTTA 57.772 45.000 14.98 0.00 0.00 1.85
2506 4306 1.329599 GAACAGAAACGCGTGGACTTT 59.670 47.619 14.98 1.52 0.00 2.66
2507 4307 0.935196 GAACAGAAACGCGTGGACTT 59.065 50.000 14.98 2.02 0.00 3.01
2508 4308 0.878961 GGAACAGAAACGCGTGGACT 60.879 55.000 14.98 10.05 0.00 3.85
2509 4309 1.568025 GGAACAGAAACGCGTGGAC 59.432 57.895 14.98 7.56 0.00 4.02
2510 4310 1.595929 GGGAACAGAAACGCGTGGA 60.596 57.895 14.98 0.00 0.00 4.02
2511 4311 1.890041 TGGGAACAGAAACGCGTGG 60.890 57.895 14.98 5.64 35.01 4.94
2512 4312 1.278637 GTGGGAACAGAAACGCGTG 59.721 57.895 14.98 1.74 44.46 5.34
2513 4313 1.153329 TGTGGGAACAGAAACGCGT 60.153 52.632 5.58 5.58 44.46 6.01
2514 4314 1.157870 ACTGTGGGAACAGAAACGCG 61.158 55.000 12.57 3.53 44.46 6.01
2515 4315 0.307760 CACTGTGGGAACAGAAACGC 59.692 55.000 12.57 0.00 44.46 4.84
2516 4316 1.597663 GACACTGTGGGAACAGAAACG 59.402 52.381 13.09 1.48 44.46 3.60
2517 4317 2.614057 CAGACACTGTGGGAACAGAAAC 59.386 50.000 13.09 3.62 44.46 2.78
2518 4318 2.917933 CAGACACTGTGGGAACAGAAA 58.082 47.619 13.09 0.00 44.46 2.52
2519 4319 1.475034 GCAGACACTGTGGGAACAGAA 60.475 52.381 13.09 0.00 44.46 3.02
2520 4320 0.106708 GCAGACACTGTGGGAACAGA 59.893 55.000 13.09 0.00 44.46 3.41
2521 4321 0.107456 AGCAGACACTGTGGGAACAG 59.893 55.000 13.09 4.36 44.46 3.16
2522 4322 0.546122 AAGCAGACACTGTGGGAACA 59.454 50.000 13.09 0.00 33.43 3.18
2523 4323 1.202698 AGAAGCAGACACTGTGGGAAC 60.203 52.381 13.09 0.00 33.43 3.62
2524 4324 1.131638 AGAAGCAGACACTGTGGGAA 58.868 50.000 13.09 0.00 33.43 3.97
2525 4325 1.070758 GAAGAAGCAGACACTGTGGGA 59.929 52.381 13.09 0.00 33.43 4.37
2526 4326 1.071385 AGAAGAAGCAGACACTGTGGG 59.929 52.381 13.09 2.53 33.43 4.61
2527 4327 2.540265 AGAAGAAGCAGACACTGTGG 57.460 50.000 13.09 0.00 33.43 4.17
2528 4328 4.325741 CGAATAGAAGAAGCAGACACTGTG 59.674 45.833 6.19 6.19 33.43 3.66
2529 4329 4.218635 TCGAATAGAAGAAGCAGACACTGT 59.781 41.667 0.00 0.00 33.43 3.55
2530 4330 4.560819 GTCGAATAGAAGAAGCAGACACTG 59.439 45.833 0.00 0.00 34.12 3.66
2531 4331 4.218635 TGTCGAATAGAAGAAGCAGACACT 59.781 41.667 0.00 0.00 33.20 3.55
2532 4332 4.486090 TGTCGAATAGAAGAAGCAGACAC 58.514 43.478 0.00 0.00 33.20 3.67
2533 4333 4.738124 CTGTCGAATAGAAGAAGCAGACA 58.262 43.478 0.00 0.00 36.21 3.41
2534 4334 3.549873 GCTGTCGAATAGAAGAAGCAGAC 59.450 47.826 2.35 0.00 34.23 3.51
2535 4335 3.193479 TGCTGTCGAATAGAAGAAGCAGA 59.807 43.478 2.35 0.00 37.24 4.26
2536 4336 3.305629 GTGCTGTCGAATAGAAGAAGCAG 59.694 47.826 2.35 0.00 40.47 4.24
2537 4337 3.254060 GTGCTGTCGAATAGAAGAAGCA 58.746 45.455 2.35 0.00 38.76 3.91
2538 4338 2.280183 CGTGCTGTCGAATAGAAGAAGC 59.720 50.000 2.35 0.00 34.49 3.86
2539 4339 3.759418 TCGTGCTGTCGAATAGAAGAAG 58.241 45.455 2.35 0.00 36.89 2.85
2540 4340 3.759418 CTCGTGCTGTCGAATAGAAGAA 58.241 45.455 2.35 0.00 39.34 2.52
2541 4341 2.478031 GCTCGTGCTGTCGAATAGAAGA 60.478 50.000 1.41 0.00 39.34 2.87
2542 4342 1.849219 GCTCGTGCTGTCGAATAGAAG 59.151 52.381 1.41 0.00 39.34 2.85
2543 4343 1.909376 GCTCGTGCTGTCGAATAGAA 58.091 50.000 1.41 0.00 39.34 2.10
2544 4344 3.624305 GCTCGTGCTGTCGAATAGA 57.376 52.632 1.41 0.00 39.34 1.98
2559 4359 3.067833 GGGTGTTAGTTGAGTTGAGCTC 58.932 50.000 6.82 6.82 44.36 4.09
2560 4360 2.548067 CGGGTGTTAGTTGAGTTGAGCT 60.548 50.000 0.00 0.00 0.00 4.09
2561 4361 1.798813 CGGGTGTTAGTTGAGTTGAGC 59.201 52.381 0.00 0.00 0.00 4.26
2562 4362 1.798813 GCGGGTGTTAGTTGAGTTGAG 59.201 52.381 0.00 0.00 0.00 3.02
2563 4363 1.541670 GGCGGGTGTTAGTTGAGTTGA 60.542 52.381 0.00 0.00 0.00 3.18
2564 4364 0.872388 GGCGGGTGTTAGTTGAGTTG 59.128 55.000 0.00 0.00 0.00 3.16
2565 4365 0.470766 TGGCGGGTGTTAGTTGAGTT 59.529 50.000 0.00 0.00 0.00 3.01
2566 4366 0.470766 TTGGCGGGTGTTAGTTGAGT 59.529 50.000 0.00 0.00 0.00 3.41
2567 4367 0.872388 GTTGGCGGGTGTTAGTTGAG 59.128 55.000 0.00 0.00 0.00 3.02
2568 4368 0.535553 GGTTGGCGGGTGTTAGTTGA 60.536 55.000 0.00 0.00 0.00 3.18
2569 4369 0.820074 TGGTTGGCGGGTGTTAGTTG 60.820 55.000 0.00 0.00 0.00 3.16
2570 4370 0.820482 GTGGTTGGCGGGTGTTAGTT 60.820 55.000 0.00 0.00 0.00 2.24
2571 4371 1.228033 GTGGTTGGCGGGTGTTAGT 60.228 57.895 0.00 0.00 0.00 2.24
2572 4372 1.969589 GGTGGTTGGCGGGTGTTAG 60.970 63.158 0.00 0.00 0.00 2.34
2573 4373 1.126329 TAGGTGGTTGGCGGGTGTTA 61.126 55.000 0.00 0.00 0.00 2.41
2574 4374 1.997256 TTAGGTGGTTGGCGGGTGTT 61.997 55.000 0.00 0.00 0.00 3.32
2575 4375 2.453812 TTAGGTGGTTGGCGGGTGT 61.454 57.895 0.00 0.00 0.00 4.16
2576 4376 1.969589 GTTAGGTGGTTGGCGGGTG 60.970 63.158 0.00 0.00 0.00 4.61
2577 4377 2.120737 GAGTTAGGTGGTTGGCGGGT 62.121 60.000 0.00 0.00 0.00 5.28
2578 4378 1.376812 GAGTTAGGTGGTTGGCGGG 60.377 63.158 0.00 0.00 0.00 6.13
2579 4379 0.673644 CTGAGTTAGGTGGTTGGCGG 60.674 60.000 0.00 0.00 0.00 6.13
2580 4380 0.034896 ACTGAGTTAGGTGGTTGGCG 59.965 55.000 0.00 0.00 0.00 5.69
2581 4381 2.271944 AACTGAGTTAGGTGGTTGGC 57.728 50.000 0.00 0.00 0.00 4.52
2582 4382 5.335661 GCATTTAACTGAGTTAGGTGGTTGG 60.336 44.000 15.85 2.00 29.41 3.77
2583 4383 5.240623 TGCATTTAACTGAGTTAGGTGGTTG 59.759 40.000 15.85 7.21 29.41 3.77
2584 4384 5.240844 GTGCATTTAACTGAGTTAGGTGGTT 59.759 40.000 15.85 0.00 29.41 3.67
2585 4385 4.760204 GTGCATTTAACTGAGTTAGGTGGT 59.240 41.667 15.85 0.00 29.41 4.16
2586 4386 5.003804 AGTGCATTTAACTGAGTTAGGTGG 58.996 41.667 15.85 6.26 29.41 4.61
2587 4387 5.700832 TCAGTGCATTTAACTGAGTTAGGTG 59.299 40.000 5.10 9.32 46.96 4.00
2588 4388 5.865085 TCAGTGCATTTAACTGAGTTAGGT 58.135 37.500 5.10 0.00 46.96 3.08
2606 4406 3.291584 TGGAGGACTAGTAGCATCAGTG 58.708 50.000 0.00 0.00 0.00 3.66
2607 4407 3.671740 TGGAGGACTAGTAGCATCAGT 57.328 47.619 0.00 0.00 0.00 3.41
2608 4408 3.243234 CGTTGGAGGACTAGTAGCATCAG 60.243 52.174 0.00 0.00 0.00 2.90
2609 4409 2.688446 CGTTGGAGGACTAGTAGCATCA 59.312 50.000 0.00 0.00 0.00 3.07
2610 4410 2.034812 CCGTTGGAGGACTAGTAGCATC 59.965 54.545 0.00 0.00 0.00 3.91
2611 4411 2.032620 CCGTTGGAGGACTAGTAGCAT 58.967 52.381 0.00 0.00 0.00 3.79
2612 4412 1.272313 ACCGTTGGAGGACTAGTAGCA 60.272 52.381 0.00 0.00 34.73 3.49
2613 4413 1.404748 GACCGTTGGAGGACTAGTAGC 59.595 57.143 0.00 0.00 34.73 3.58
2614 4414 2.022934 GGACCGTTGGAGGACTAGTAG 58.977 57.143 0.00 0.00 34.73 2.57
2615 4415 1.341383 GGGACCGTTGGAGGACTAGTA 60.341 57.143 0.00 0.00 34.73 1.82
2616 4416 0.614134 GGGACCGTTGGAGGACTAGT 60.614 60.000 0.00 0.00 34.73 2.57
2617 4417 1.328430 GGGGACCGTTGGAGGACTAG 61.328 65.000 0.00 0.00 40.86 2.57
2618 4418 1.305549 GGGGACCGTTGGAGGACTA 60.306 63.158 0.00 0.00 40.86 2.59
2619 4419 2.606826 GGGGACCGTTGGAGGACT 60.607 66.667 0.00 0.00 40.86 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.