Multiple sequence alignment - TraesCS7A01G051300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G051300 chr7A 100.000 3519 0 0 1 3519 24861661 24858143 0.000000e+00 6499.0
1 TraesCS7A01G051300 chr7A 90.944 1800 124 23 881 2658 24992945 24994727 0.000000e+00 2385.0
2 TraesCS7A01G051300 chr7A 87.637 1278 94 31 844 2102 43444985 43446217 0.000000e+00 1426.0
3 TraesCS7A01G051300 chr7A 97.587 829 17 3 2693 3519 675336138 675336965 0.000000e+00 1417.0
4 TraesCS7A01G051300 chr7A 86.561 945 69 27 1044 1969 43467714 43468619 0.000000e+00 989.0
5 TraesCS7A01G051300 chr7A 82.074 887 145 8 1640 2519 128149630 128148751 0.000000e+00 745.0
6 TraesCS7A01G051300 chr7A 89.791 382 25 3 3138 3519 19068875 19069242 8.840000e-131 477.0
7 TraesCS7A01G051300 chr7A 95.833 288 12 0 381 668 647308213 647307926 1.910000e-127 466.0
8 TraesCS7A01G051300 chr7A 89.773 176 16 1 211 384 686164268 686164093 1.270000e-54 224.0
9 TraesCS7A01G051300 chr7A 88.202 178 7 3 209 384 16165199 16165364 2.140000e-47 200.0
10 TraesCS7A01G051300 chr7A 81.395 215 18 12 844 1047 45680896 45681099 4.700000e-34 156.0
11 TraesCS7A01G051300 chr7A 90.179 112 11 0 2547 2658 43446275 43446386 2.830000e-31 147.0
12 TraesCS7A01G051300 chr7A 85.950 121 16 1 212 331 429869623 429869503 1.030000e-25 128.0
13 TraesCS7A01G051300 chr7A 86.957 92 7 4 2572 2658 43479092 43479183 8.040000e-17 99.0
14 TraesCS7A01G051300 chr7A 85.185 81 12 0 2425 2505 25710231 25710311 2.250000e-12 84.2
15 TraesCS7A01G051300 chrUn 89.939 1799 135 30 881 2659 90141245 90139473 0.000000e+00 2278.0
16 TraesCS7A01G051300 chrUn 81.395 215 18 14 844 1047 331997108 331996905 4.700000e-34 156.0
17 TraesCS7A01G051300 chrUn 81.395 215 18 12 844 1047 375431682 375431885 4.700000e-34 156.0
18 TraesCS7A01G051300 chr7D 94.705 1303 47 8 1405 2698 24371320 24370031 0.000000e+00 2004.0
19 TraesCS7A01G051300 chr7D 86.940 1317 83 34 844 2125 43481880 43483142 0.000000e+00 1397.0
20 TraesCS7A01G051300 chr7D 95.040 504 17 2 844 1347 24371813 24371318 0.000000e+00 785.0
21 TraesCS7A01G051300 chr7D 81.138 896 152 9 1640 2519 127342369 127341475 0.000000e+00 702.0
22 TraesCS7A01G051300 chr7D 81.967 183 30 3 205 384 29677059 29677241 6.080000e-33 152.0
23 TraesCS7A01G051300 chr7D 91.667 84 7 0 2575 2658 43483472 43483555 2.220000e-22 117.0
24 TraesCS7A01G051300 chr7D 90.196 51 5 0 212 262 229801501 229801551 2.270000e-07 67.6
25 TraesCS7A01G051300 chr5A 97.708 829 14 5 2693 3519 552306388 552307213 0.000000e+00 1421.0
26 TraesCS7A01G051300 chr5A 95.848 289 12 0 380 668 637058114 637058402 5.320000e-128 468.0
27 TraesCS7A01G051300 chr5A 95.819 287 12 0 381 667 383894540 383894826 6.880000e-127 464.0
28 TraesCS7A01G051300 chr6D 91.067 806 57 5 2715 3519 431049060 431049851 0.000000e+00 1075.0
29 TraesCS7A01G051300 chr7B 81.486 902 144 14 1637 2519 89001762 89002659 0.000000e+00 719.0
30 TraesCS7A01G051300 chr4A 96.474 312 11 0 1281 1592 707236409 707236098 1.870000e-142 516.0
31 TraesCS7A01G051300 chr4A 87.755 441 24 6 844 1280 707238176 707237762 4.080000e-134 488.0
32 TraesCS7A01G051300 chr4A 94.295 298 14 2 379 673 619765764 619765467 1.490000e-123 453.0
33 TraesCS7A01G051300 chr4A 87.857 140 14 2 1 140 707238780 707238644 1.010000e-35 161.0
34 TraesCS7A01G051300 chr1A 96.875 288 9 0 378 665 41902547 41902260 1.900000e-132 483.0
35 TraesCS7A01G051300 chr1A 94.295 298 15 2 372 668 491146382 491146086 4.140000e-124 455.0
36 TraesCS7A01G051300 chr5B 89.791 382 25 3 3138 3519 237119030 237119397 8.840000e-131 477.0
37 TraesCS7A01G051300 chr5B 95.819 287 12 0 381 667 439263993 439263707 6.880000e-127 464.0
38 TraesCS7A01G051300 chr5B 79.429 175 28 6 211 383 137671082 137671250 2.220000e-22 117.0
39 TraesCS7A01G051300 chr2A 89.791 382 25 3 3138 3519 3787239 3787606 8.840000e-131 477.0
40 TraesCS7A01G051300 chr2A 94.613 297 15 1 372 668 191928093 191927798 3.200000e-125 459.0
41 TraesCS7A01G051300 chr2A 82.390 159 23 3 224 379 701863085 701862929 2.200000e-27 134.0
42 TraesCS7A01G051300 chr6A 95.890 292 11 1 375 665 564393092 564392801 4.110000e-129 472.0
43 TraesCS7A01G051300 chr3B 88.321 137 12 2 250 384 39578922 39578788 1.010000e-35 161.0
44 TraesCS7A01G051300 chr2D 83.240 179 23 2 209 384 209024509 209024683 1.310000e-34 158.0
45 TraesCS7A01G051300 chr2D 81.111 180 26 7 212 384 569306955 569306777 1.700000e-28 137.0
46 TraesCS7A01G051300 chr4B 88.462 130 14 1 213 341 396492332 396492203 4.700000e-34 156.0
47 TraesCS7A01G051300 chr1B 82.778 180 26 4 209 384 94513236 94513414 4.700000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G051300 chr7A 24858143 24861661 3518 True 6499.000000 6499 100.000000 1 3519 1 chr7A.!!$R1 3518
1 TraesCS7A01G051300 chr7A 24992945 24994727 1782 False 2385.000000 2385 90.944000 881 2658 1 chr7A.!!$F3 1777
2 TraesCS7A01G051300 chr7A 675336138 675336965 827 False 1417.000000 1417 97.587000 2693 3519 1 chr7A.!!$F8 826
3 TraesCS7A01G051300 chr7A 43467714 43468619 905 False 989.000000 989 86.561000 1044 1969 1 chr7A.!!$F5 925
4 TraesCS7A01G051300 chr7A 43444985 43446386 1401 False 786.500000 1426 88.908000 844 2658 2 chr7A.!!$F9 1814
5 TraesCS7A01G051300 chr7A 128148751 128149630 879 True 745.000000 745 82.074000 1640 2519 1 chr7A.!!$R2 879
6 TraesCS7A01G051300 chrUn 90139473 90141245 1772 True 2278.000000 2278 89.939000 881 2659 1 chrUn.!!$R1 1778
7 TraesCS7A01G051300 chr7D 24370031 24371813 1782 True 1394.500000 2004 94.872500 844 2698 2 chr7D.!!$R2 1854
8 TraesCS7A01G051300 chr7D 43481880 43483555 1675 False 757.000000 1397 89.303500 844 2658 2 chr7D.!!$F3 1814
9 TraesCS7A01G051300 chr7D 127341475 127342369 894 True 702.000000 702 81.138000 1640 2519 1 chr7D.!!$R1 879
10 TraesCS7A01G051300 chr5A 552306388 552307213 825 False 1421.000000 1421 97.708000 2693 3519 1 chr5A.!!$F2 826
11 TraesCS7A01G051300 chr6D 431049060 431049851 791 False 1075.000000 1075 91.067000 2715 3519 1 chr6D.!!$F1 804
12 TraesCS7A01G051300 chr7B 89001762 89002659 897 False 719.000000 719 81.486000 1637 2519 1 chr7B.!!$F1 882
13 TraesCS7A01G051300 chr4A 707236098 707238780 2682 True 388.333333 516 90.695333 1 1592 3 chr4A.!!$R2 1591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 249 0.034477 ACCGTGGCTATTGGGAAAGG 60.034 55.0 0.00 0.0 0.0 3.11 F
214 251 0.034477 CGTGGCTATTGGGAAAGGGT 60.034 55.0 0.00 0.0 0.0 4.34 F
876 1132 0.179076 TCCACACGATGCATGGCTAG 60.179 55.0 2.46 0.0 33.2 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1117 1384 1.130054 TTGAGGCCAGAGCAGAAGGT 61.130 55.000 5.01 0.0 42.56 3.50 R
1147 1414 1.269413 GCATCAATGGCTGCATGTACC 60.269 52.381 0.50 0.0 38.28 3.34 R
2804 4843 0.045778 AGGGGGCACTGGTACCTTAT 59.954 55.000 14.36 0.0 0.00 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.238942 AGAGCAACATGACACGAACA 57.761 45.000 0.00 0.00 0.00 3.18
23 24 1.597195 GAGCAACATGACACGAACACA 59.403 47.619 0.00 0.00 0.00 3.72
29 30 1.716050 CATGACACGAACACAGAGACG 59.284 52.381 0.00 0.00 0.00 4.18
32 33 0.311165 ACACGAACACAGAGACGAGG 59.689 55.000 0.00 0.00 0.00 4.63
34 35 0.822532 ACGAACACAGAGACGAGGGT 60.823 55.000 0.00 0.00 0.00 4.34
39 40 3.088789 ACACAGAGACGAGGGTAGAAT 57.911 47.619 0.00 0.00 0.00 2.40
57 58 1.109920 ATGGTCGATAGCGCTGTCCT 61.110 55.000 25.90 5.97 37.46 3.85
76 77 4.700037 GATGAGGCTCGTCGTCAG 57.300 61.111 20.15 0.00 42.13 3.51
89 90 0.677288 TCGTCAGGAACACGTTGGAT 59.323 50.000 0.00 0.00 38.45 3.41
130 131 2.677971 CGACATCGCCTACAAAGGG 58.322 57.895 0.00 0.00 43.87 3.95
157 194 0.950836 CAACCACCACTCGCATTCAA 59.049 50.000 0.00 0.00 0.00 2.69
158 195 0.951558 AACCACCACTCGCATTCAAC 59.048 50.000 0.00 0.00 0.00 3.18
159 196 0.179032 ACCACCACTCGCATTCAACA 60.179 50.000 0.00 0.00 0.00 3.33
160 197 0.518636 CCACCACTCGCATTCAACAG 59.481 55.000 0.00 0.00 0.00 3.16
161 198 1.511850 CACCACTCGCATTCAACAGA 58.488 50.000 0.00 0.00 0.00 3.41
162 199 1.462283 CACCACTCGCATTCAACAGAG 59.538 52.381 0.00 0.00 36.83 3.35
163 200 0.445436 CCACTCGCATTCAACAGAGC 59.555 55.000 0.00 0.00 34.31 4.09
164 201 1.436600 CACTCGCATTCAACAGAGCT 58.563 50.000 0.00 0.00 34.31 4.09
165 202 1.392853 CACTCGCATTCAACAGAGCTC 59.607 52.381 5.27 5.27 34.31 4.09
166 203 0.644331 CTCGCATTCAACAGAGCTCG 59.356 55.000 8.37 6.04 0.00 5.03
167 204 0.243636 TCGCATTCAACAGAGCTCGA 59.756 50.000 8.37 0.00 0.00 4.04
168 205 1.070821 CGCATTCAACAGAGCTCGAA 58.929 50.000 8.37 6.15 0.00 3.71
169 206 1.201855 CGCATTCAACAGAGCTCGAAC 60.202 52.381 8.37 0.00 0.00 3.95
170 207 2.072298 GCATTCAACAGAGCTCGAACT 58.928 47.619 8.37 0.00 0.00 3.01
171 208 2.159734 GCATTCAACAGAGCTCGAACTG 60.160 50.000 8.37 3.41 39.65 3.16
172 209 2.154854 TTCAACAGAGCTCGAACTGG 57.845 50.000 8.37 0.00 38.30 4.00
173 210 1.328279 TCAACAGAGCTCGAACTGGA 58.672 50.000 8.37 0.00 38.30 3.86
182 219 0.669625 CTCGAACTGGAAACGGGGAC 60.670 60.000 0.00 0.00 42.76 4.46
212 249 0.034477 ACCGTGGCTATTGGGAAAGG 60.034 55.000 0.00 0.00 0.00 3.11
213 250 0.751643 CCGTGGCTATTGGGAAAGGG 60.752 60.000 0.00 0.00 0.00 3.95
214 251 0.034477 CGTGGCTATTGGGAAAGGGT 60.034 55.000 0.00 0.00 0.00 4.34
215 252 1.474330 GTGGCTATTGGGAAAGGGTG 58.526 55.000 0.00 0.00 0.00 4.61
216 253 1.080638 TGGCTATTGGGAAAGGGTGT 58.919 50.000 0.00 0.00 0.00 4.16
217 254 1.272425 TGGCTATTGGGAAAGGGTGTG 60.272 52.381 0.00 0.00 0.00 3.82
218 255 1.272480 GGCTATTGGGAAAGGGTGTGT 60.272 52.381 0.00 0.00 0.00 3.72
219 256 2.092323 GCTATTGGGAAAGGGTGTGTC 58.908 52.381 0.00 0.00 0.00 3.67
220 257 2.290960 GCTATTGGGAAAGGGTGTGTCT 60.291 50.000 0.00 0.00 0.00 3.41
221 258 3.054655 GCTATTGGGAAAGGGTGTGTCTA 60.055 47.826 0.00 0.00 0.00 2.59
222 259 3.721087 ATTGGGAAAGGGTGTGTCTAG 57.279 47.619 0.00 0.00 0.00 2.43
223 260 2.409064 TGGGAAAGGGTGTGTCTAGA 57.591 50.000 0.00 0.00 0.00 2.43
224 261 2.915869 TGGGAAAGGGTGTGTCTAGAT 58.084 47.619 0.00 0.00 0.00 1.98
225 262 2.571653 TGGGAAAGGGTGTGTCTAGATG 59.428 50.000 0.00 0.00 0.00 2.90
226 263 2.572104 GGGAAAGGGTGTGTCTAGATGT 59.428 50.000 0.00 0.00 0.00 3.06
227 264 3.009143 GGGAAAGGGTGTGTCTAGATGTT 59.991 47.826 0.00 0.00 0.00 2.71
228 265 4.224370 GGGAAAGGGTGTGTCTAGATGTTA 59.776 45.833 0.00 0.00 0.00 2.41
229 266 5.420409 GGAAAGGGTGTGTCTAGATGTTAG 58.580 45.833 0.00 0.00 0.00 2.34
230 267 5.046520 GGAAAGGGTGTGTCTAGATGTTAGT 60.047 44.000 0.00 0.00 0.00 2.24
231 268 5.662674 AAGGGTGTGTCTAGATGTTAGTC 57.337 43.478 0.00 0.00 0.00 2.59
232 269 3.695060 AGGGTGTGTCTAGATGTTAGTCG 59.305 47.826 0.00 0.00 0.00 4.18
233 270 3.693085 GGGTGTGTCTAGATGTTAGTCGA 59.307 47.826 0.00 0.00 0.00 4.20
234 271 4.438472 GGGTGTGTCTAGATGTTAGTCGAC 60.438 50.000 7.70 7.70 0.00 4.20
235 272 4.395542 GGTGTGTCTAGATGTTAGTCGACT 59.604 45.833 23.66 23.66 0.00 4.18
236 273 5.325494 GTGTGTCTAGATGTTAGTCGACTG 58.675 45.833 28.12 8.61 0.00 3.51
237 274 5.121925 GTGTGTCTAGATGTTAGTCGACTGA 59.878 44.000 28.12 17.78 0.00 3.41
238 275 5.351740 TGTGTCTAGATGTTAGTCGACTGAG 59.648 44.000 28.12 12.44 0.00 3.35
239 276 5.581479 GTGTCTAGATGTTAGTCGACTGAGA 59.419 44.000 28.12 18.96 0.00 3.27
240 277 5.581479 TGTCTAGATGTTAGTCGACTGAGAC 59.419 44.000 28.12 22.89 41.23 3.36
260 297 4.086706 ACTTAACCAAGTCCCAGTCAAG 57.913 45.455 0.00 0.00 41.25 3.02
261 298 3.458487 ACTTAACCAAGTCCCAGTCAAGT 59.542 43.478 0.00 0.00 41.25 3.16
262 299 2.348411 AACCAAGTCCCAGTCAAGTG 57.652 50.000 0.00 0.00 0.00 3.16
263 300 1.507140 ACCAAGTCCCAGTCAAGTGA 58.493 50.000 0.00 0.00 0.00 3.41
264 301 2.057922 ACCAAGTCCCAGTCAAGTGAT 58.942 47.619 0.00 0.00 0.00 3.06
265 302 3.248024 ACCAAGTCCCAGTCAAGTGATA 58.752 45.455 0.00 0.00 0.00 2.15
266 303 3.261897 ACCAAGTCCCAGTCAAGTGATAG 59.738 47.826 0.00 0.00 0.00 2.08
267 304 3.261897 CCAAGTCCCAGTCAAGTGATAGT 59.738 47.826 0.00 0.00 0.00 2.12
268 305 4.248859 CAAGTCCCAGTCAAGTGATAGTG 58.751 47.826 0.00 0.00 0.00 2.74
269 306 3.511477 AGTCCCAGTCAAGTGATAGTGT 58.489 45.455 0.00 0.00 0.00 3.55
270 307 4.673968 AGTCCCAGTCAAGTGATAGTGTA 58.326 43.478 0.00 0.00 0.00 2.90
271 308 5.273208 AGTCCCAGTCAAGTGATAGTGTAT 58.727 41.667 0.00 0.00 0.00 2.29
272 309 6.432581 AGTCCCAGTCAAGTGATAGTGTATA 58.567 40.000 0.00 0.00 0.00 1.47
273 310 7.069986 AGTCCCAGTCAAGTGATAGTGTATAT 58.930 38.462 0.00 0.00 0.00 0.86
274 311 7.014711 AGTCCCAGTCAAGTGATAGTGTATATG 59.985 40.741 0.00 0.00 0.00 1.78
275 312 6.267699 TCCCAGTCAAGTGATAGTGTATATGG 59.732 42.308 0.00 0.00 0.00 2.74
276 313 6.267699 CCCAGTCAAGTGATAGTGTATATGGA 59.732 42.308 0.00 0.00 0.00 3.41
277 314 7.202001 CCCAGTCAAGTGATAGTGTATATGGAA 60.202 40.741 0.00 0.00 0.00 3.53
278 315 8.204160 CCAGTCAAGTGATAGTGTATATGGAAA 58.796 37.037 0.00 0.00 0.00 3.13
279 316 9.254133 CAGTCAAGTGATAGTGTATATGGAAAG 57.746 37.037 0.00 0.00 0.00 2.62
280 317 9.201989 AGTCAAGTGATAGTGTATATGGAAAGA 57.798 33.333 0.00 0.00 0.00 2.52
281 318 9.817809 GTCAAGTGATAGTGTATATGGAAAGAA 57.182 33.333 0.00 0.00 0.00 2.52
298 335 8.546597 TGGAAAGAAAAAGGAAAACTGAAAAG 57.453 30.769 0.00 0.00 0.00 2.27
299 336 8.371699 TGGAAAGAAAAAGGAAAACTGAAAAGA 58.628 29.630 0.00 0.00 0.00 2.52
300 337 9.214957 GGAAAGAAAAAGGAAAACTGAAAAGAA 57.785 29.630 0.00 0.00 0.00 2.52
328 365 9.502145 TTTTTGTACGAATCTCAATGCAATATC 57.498 29.630 0.00 0.00 0.00 1.63
329 366 7.784633 TTGTACGAATCTCAATGCAATATCA 57.215 32.000 0.00 0.00 0.00 2.15
330 367 7.784633 TGTACGAATCTCAATGCAATATCAA 57.215 32.000 0.00 0.00 0.00 2.57
331 368 8.382030 TGTACGAATCTCAATGCAATATCAAT 57.618 30.769 0.00 0.00 0.00 2.57
332 369 8.284693 TGTACGAATCTCAATGCAATATCAATG 58.715 33.333 0.00 0.00 0.00 2.82
333 370 6.675026 ACGAATCTCAATGCAATATCAATGG 58.325 36.000 0.00 0.00 0.00 3.16
334 371 6.487668 ACGAATCTCAATGCAATATCAATGGA 59.512 34.615 0.00 0.00 0.00 3.41
335 372 7.013559 ACGAATCTCAATGCAATATCAATGGAA 59.986 33.333 0.00 0.00 0.00 3.53
336 373 8.027189 CGAATCTCAATGCAATATCAATGGAAT 58.973 33.333 0.00 0.00 0.00 3.01
339 376 8.694581 TCTCAATGCAATATCAATGGAATACA 57.305 30.769 0.00 0.00 0.00 2.29
340 377 9.134055 TCTCAATGCAATATCAATGGAATACAA 57.866 29.630 0.00 0.00 0.00 2.41
341 378 9.188588 CTCAATGCAATATCAATGGAATACAAC 57.811 33.333 0.00 0.00 0.00 3.32
342 379 8.693625 TCAATGCAATATCAATGGAATACAACA 58.306 29.630 0.00 0.00 0.00 3.33
343 380 9.483916 CAATGCAATATCAATGGAATACAACAT 57.516 29.630 0.00 0.00 0.00 2.71
344 381 9.701098 AATGCAATATCAATGGAATACAACATC 57.299 29.630 0.00 0.00 0.00 3.06
345 382 7.361894 TGCAATATCAATGGAATACAACATCG 58.638 34.615 0.00 0.00 0.00 3.84
346 383 7.228308 TGCAATATCAATGGAATACAACATCGA 59.772 33.333 0.00 0.00 0.00 3.59
347 384 7.535258 GCAATATCAATGGAATACAACATCGAC 59.465 37.037 0.00 0.00 0.00 4.20
348 385 8.777413 CAATATCAATGGAATACAACATCGACT 58.223 33.333 0.00 0.00 0.00 4.18
349 386 6.609237 ATCAATGGAATACAACATCGACTG 57.391 37.500 0.00 0.00 0.00 3.51
350 387 5.729510 TCAATGGAATACAACATCGACTGA 58.270 37.500 0.00 0.00 0.00 3.41
351 388 6.169800 TCAATGGAATACAACATCGACTGAA 58.830 36.000 0.00 0.00 0.00 3.02
352 389 6.652900 TCAATGGAATACAACATCGACTGAAA 59.347 34.615 0.00 0.00 0.00 2.69
353 390 5.856126 TGGAATACAACATCGACTGAAAC 57.144 39.130 0.00 0.00 0.00 2.78
354 391 5.301555 TGGAATACAACATCGACTGAAACA 58.698 37.500 0.00 0.00 0.00 2.83
355 392 5.937540 TGGAATACAACATCGACTGAAACAT 59.062 36.000 0.00 0.00 0.00 2.71
356 393 7.100409 TGGAATACAACATCGACTGAAACATA 58.900 34.615 0.00 0.00 0.00 2.29
357 394 7.604545 TGGAATACAACATCGACTGAAACATAA 59.395 33.333 0.00 0.00 0.00 1.90
358 395 8.612619 GGAATACAACATCGACTGAAACATAAT 58.387 33.333 0.00 0.00 0.00 1.28
359 396 9.425893 GAATACAACATCGACTGAAACATAATG 57.574 33.333 0.00 0.00 0.00 1.90
360 397 8.716646 ATACAACATCGACTGAAACATAATGA 57.283 30.769 0.00 0.00 0.00 2.57
361 398 7.433708 ACAACATCGACTGAAACATAATGAA 57.566 32.000 0.00 0.00 0.00 2.57
362 399 7.521529 ACAACATCGACTGAAACATAATGAAG 58.478 34.615 0.00 0.00 0.00 3.02
363 400 7.173218 ACAACATCGACTGAAACATAATGAAGT 59.827 33.333 0.00 0.00 0.00 3.01
364 401 7.295952 ACATCGACTGAAACATAATGAAGTC 57.704 36.000 0.00 0.00 0.00 3.01
365 402 7.099764 ACATCGACTGAAACATAATGAAGTCT 58.900 34.615 0.00 0.00 33.49 3.24
366 403 8.251026 ACATCGACTGAAACATAATGAAGTCTA 58.749 33.333 0.00 0.00 33.49 2.59
367 404 9.087424 CATCGACTGAAACATAATGAAGTCTAA 57.913 33.333 0.00 0.00 33.49 2.10
368 405 8.689251 TCGACTGAAACATAATGAAGTCTAAG 57.311 34.615 0.00 0.00 33.49 2.18
369 406 8.304596 TCGACTGAAACATAATGAAGTCTAAGT 58.695 33.333 0.00 0.00 33.49 2.24
370 407 8.587950 CGACTGAAACATAATGAAGTCTAAGTC 58.412 37.037 0.00 0.00 33.49 3.01
371 408 8.467402 ACTGAAACATAATGAAGTCTAAGTCG 57.533 34.615 0.00 0.00 0.00 4.18
372 409 8.304596 ACTGAAACATAATGAAGTCTAAGTCGA 58.695 33.333 0.00 0.00 0.00 4.20
373 410 8.462143 TGAAACATAATGAAGTCTAAGTCGAC 57.538 34.615 7.70 7.70 0.00 4.20
374 411 8.304596 TGAAACATAATGAAGTCTAAGTCGACT 58.695 33.333 13.58 13.58 45.73 4.18
375 412 8.467402 AAACATAATGAAGTCTAAGTCGACTG 57.533 34.615 20.85 7.79 43.14 3.51
376 413 7.392494 ACATAATGAAGTCTAAGTCGACTGA 57.608 36.000 20.85 11.31 43.14 3.41
377 414 7.476667 ACATAATGAAGTCTAAGTCGACTGAG 58.523 38.462 22.32 22.32 43.14 3.35
378 415 7.337184 ACATAATGAAGTCTAAGTCGACTGAGA 59.663 37.037 26.12 26.12 43.14 3.27
388 425 2.713877 GTCGACTGAGACTTAGAGGGT 58.286 52.381 8.70 0.00 38.09 4.34
389 426 2.420722 GTCGACTGAGACTTAGAGGGTG 59.579 54.545 8.70 0.00 38.09 4.61
390 427 2.040012 TCGACTGAGACTTAGAGGGTGT 59.960 50.000 0.47 0.00 0.00 4.16
391 428 2.820787 CGACTGAGACTTAGAGGGTGTT 59.179 50.000 0.47 0.00 0.00 3.32
392 429 3.256136 CGACTGAGACTTAGAGGGTGTTT 59.744 47.826 0.47 0.00 0.00 2.83
393 430 4.561105 GACTGAGACTTAGAGGGTGTTTG 58.439 47.826 0.47 0.00 0.00 2.93
394 431 3.967987 ACTGAGACTTAGAGGGTGTTTGT 59.032 43.478 0.47 0.00 0.00 2.83
395 432 4.409247 ACTGAGACTTAGAGGGTGTTTGTT 59.591 41.667 0.47 0.00 0.00 2.83
396 433 5.104485 ACTGAGACTTAGAGGGTGTTTGTTT 60.104 40.000 0.47 0.00 0.00 2.83
397 434 5.365619 TGAGACTTAGAGGGTGTTTGTTTC 58.634 41.667 0.00 0.00 0.00 2.78
398 435 4.715713 AGACTTAGAGGGTGTTTGTTTCC 58.284 43.478 0.00 0.00 0.00 3.13
399 436 4.165372 AGACTTAGAGGGTGTTTGTTTCCA 59.835 41.667 0.00 0.00 0.00 3.53
400 437 4.461198 ACTTAGAGGGTGTTTGTTTCCAG 58.539 43.478 0.00 0.00 0.00 3.86
401 438 2.364972 AGAGGGTGTTTGTTTCCAGG 57.635 50.000 0.00 0.00 0.00 4.45
402 439 1.133482 AGAGGGTGTTTGTTTCCAGGG 60.133 52.381 0.00 0.00 0.00 4.45
403 440 0.930726 AGGGTGTTTGTTTCCAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
404 441 1.037493 GGGTGTTTGTTTCCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
405 442 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
406 443 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
407 444 3.558033 GGTGTTTGTTTCCAGGGACTTA 58.442 45.455 0.00 0.00 34.60 2.24
408 445 4.149598 GGTGTTTGTTTCCAGGGACTTAT 58.850 43.478 0.00 0.00 34.60 1.73
409 446 4.587262 GGTGTTTGTTTCCAGGGACTTATT 59.413 41.667 0.00 0.00 34.60 1.40
410 447 5.508994 GGTGTTTGTTTCCAGGGACTTATTG 60.509 44.000 0.00 0.00 34.60 1.90
411 448 4.586841 TGTTTGTTTCCAGGGACTTATTGG 59.413 41.667 0.00 0.00 34.60 3.16
412 449 4.463050 TTGTTTCCAGGGACTTATTGGT 57.537 40.909 0.00 0.00 34.60 3.67
413 450 4.028993 TGTTTCCAGGGACTTATTGGTC 57.971 45.455 0.00 0.00 34.60 4.02
414 451 3.655777 TGTTTCCAGGGACTTATTGGTCT 59.344 43.478 0.00 0.00 34.60 3.85
415 452 4.847512 TGTTTCCAGGGACTTATTGGTCTA 59.152 41.667 0.00 0.00 34.60 2.59
416 453 5.045869 TGTTTCCAGGGACTTATTGGTCTAG 60.046 44.000 0.00 0.00 34.60 2.43
417 454 3.654273 TCCAGGGACTTATTGGTCTAGG 58.346 50.000 0.00 0.00 34.60 3.02
418 455 2.706190 CCAGGGACTTATTGGTCTAGGG 59.294 54.545 0.00 0.00 34.60 3.53
419 456 3.632645 CCAGGGACTTATTGGTCTAGGGA 60.633 52.174 0.00 0.00 34.60 4.20
420 457 3.388350 CAGGGACTTATTGGTCTAGGGAC 59.612 52.174 0.00 0.00 38.10 4.46
421 458 3.275228 AGGGACTTATTGGTCTAGGGACT 59.725 47.826 0.00 0.00 37.88 3.85
422 459 4.038633 GGGACTTATTGGTCTAGGGACTT 58.961 47.826 0.00 0.00 41.82 3.01
423 460 5.042827 AGGGACTTATTGGTCTAGGGACTTA 60.043 44.000 0.00 0.00 37.88 2.24
424 461 5.664457 GGGACTTATTGGTCTAGGGACTTAA 59.336 44.000 0.00 0.00 41.82 1.85
425 462 6.157471 GGGACTTATTGGTCTAGGGACTTAAA 59.843 42.308 0.00 0.00 41.82 1.52
426 463 7.147355 GGGACTTATTGGTCTAGGGACTTAAAT 60.147 40.741 0.00 0.00 41.82 1.40
427 464 8.931568 GGACTTATTGGTCTAGGGACTTAAATA 58.068 37.037 0.00 0.00 41.82 1.40
453 490 9.661954 AAGTCTCTATAAGTCCCATCTAAATCA 57.338 33.333 0.00 0.00 0.00 2.57
454 491 9.661954 AGTCTCTATAAGTCCCATCTAAATCAA 57.338 33.333 0.00 0.00 0.00 2.57
459 496 9.277783 CTATAAGTCCCATCTAAATCAAACAGG 57.722 37.037 0.00 0.00 0.00 4.00
460 497 5.779241 AGTCCCATCTAAATCAAACAGGA 57.221 39.130 0.00 0.00 0.00 3.86
461 498 5.749462 AGTCCCATCTAAATCAAACAGGAG 58.251 41.667 0.00 0.00 0.00 3.69
462 499 4.884164 GTCCCATCTAAATCAAACAGGAGG 59.116 45.833 0.00 0.00 0.00 4.30
463 500 4.079787 TCCCATCTAAATCAAACAGGAGGG 60.080 45.833 0.00 0.00 0.00 4.30
464 501 4.079787 CCCATCTAAATCAAACAGGAGGGA 60.080 45.833 0.00 0.00 33.23 4.20
465 502 4.884164 CCATCTAAATCAAACAGGAGGGAC 59.116 45.833 0.00 0.00 0.00 4.46
467 504 5.843019 TCTAAATCAAACAGGAGGGACTT 57.157 39.130 0.00 0.00 41.55 3.01
468 505 6.945636 TCTAAATCAAACAGGAGGGACTTA 57.054 37.500 0.00 0.00 41.55 2.24
469 506 7.510675 TCTAAATCAAACAGGAGGGACTTAT 57.489 36.000 0.00 0.00 41.55 1.73
470 507 8.618240 TCTAAATCAAACAGGAGGGACTTATA 57.382 34.615 0.00 0.00 41.55 0.98
471 508 9.053472 TCTAAATCAAACAGGAGGGACTTATAA 57.947 33.333 0.00 0.00 41.55 0.98
472 509 9.331282 CTAAATCAAACAGGAGGGACTTATAAG 57.669 37.037 11.05 11.05 41.55 1.73
473 510 5.693769 TCAAACAGGAGGGACTTATAAGG 57.306 43.478 16.73 0.00 41.55 2.69
474 511 5.347124 TCAAACAGGAGGGACTTATAAGGA 58.653 41.667 16.73 0.00 41.55 3.36
475 512 5.189145 TCAAACAGGAGGGACTTATAAGGAC 59.811 44.000 16.73 9.80 41.55 3.85
476 513 4.628661 ACAGGAGGGACTTATAAGGACT 57.371 45.455 16.73 10.75 41.55 3.85
477 514 4.961585 ACAGGAGGGACTTATAAGGACTT 58.038 43.478 16.73 5.36 41.55 3.01
478 515 6.101274 ACAGGAGGGACTTATAAGGACTTA 57.899 41.667 16.73 0.00 41.55 2.24
479 516 6.509386 ACAGGAGGGACTTATAAGGACTTAA 58.491 40.000 16.73 0.00 41.55 1.85
480 517 6.964086 ACAGGAGGGACTTATAAGGACTTAAA 59.036 38.462 16.73 0.00 41.55 1.52
481 518 7.125963 ACAGGAGGGACTTATAAGGACTTAAAG 59.874 40.741 16.73 4.02 41.55 1.85
482 519 7.125963 CAGGAGGGACTTATAAGGACTTAAAGT 59.874 40.741 16.73 14.02 41.55 2.66
483 520 7.125963 AGGAGGGACTTATAAGGACTTAAAGTG 59.874 40.741 16.73 4.81 41.55 3.16
484 521 7.196637 AGGGACTTATAAGGACTTAAAGTGG 57.803 40.000 16.73 0.00 27.25 4.00
485 522 6.734281 AGGGACTTATAAGGACTTAAAGTGGT 59.266 38.462 16.73 0.00 27.25 4.16
486 523 7.046652 GGGACTTATAAGGACTTAAAGTGGTC 58.953 42.308 16.73 1.46 32.26 4.02
487 524 7.310858 GGGACTTATAAGGACTTAAAGTGGTCA 60.311 40.741 16.73 0.00 32.26 4.02
488 525 8.265764 GGACTTATAAGGACTTAAAGTGGTCAT 58.734 37.037 16.73 0.00 32.26 3.06
489 526 9.668497 GACTTATAAGGACTTAAAGTGGTCATT 57.332 33.333 16.73 0.00 39.31 2.57
492 529 7.703058 ATAAGGACTTAAAGTGGTCATTTGG 57.297 36.000 0.00 0.00 37.57 3.28
493 530 4.407365 AGGACTTAAAGTGGTCATTTGGG 58.593 43.478 0.00 0.00 34.49 4.12
494 531 4.105697 AGGACTTAAAGTGGTCATTTGGGA 59.894 41.667 0.00 0.00 34.49 4.37
495 532 4.217767 GGACTTAAAGTGGTCATTTGGGAC 59.782 45.833 0.00 0.00 37.06 4.46
496 533 5.061721 ACTTAAAGTGGTCATTTGGGACT 57.938 39.130 0.00 0.00 37.91 3.85
497 534 5.454966 ACTTAAAGTGGTCATTTGGGACTT 58.545 37.500 0.00 0.00 37.91 3.01
498 535 6.607019 ACTTAAAGTGGTCATTTGGGACTTA 58.393 36.000 0.00 0.00 37.91 2.24
499 536 7.238710 ACTTAAAGTGGTCATTTGGGACTTAT 58.761 34.615 0.00 0.00 37.91 1.73
500 537 5.982890 AAAGTGGTCATTTGGGACTTATG 57.017 39.130 0.00 0.00 37.91 1.90
501 538 4.927267 AGTGGTCATTTGGGACTTATGA 57.073 40.909 0.00 0.00 37.91 2.15
502 539 5.255397 AGTGGTCATTTGGGACTTATGAA 57.745 39.130 0.00 0.00 37.91 2.57
503 540 5.640147 AGTGGTCATTTGGGACTTATGAAA 58.360 37.500 0.00 0.00 37.91 2.69
504 541 6.256053 AGTGGTCATTTGGGACTTATGAAAT 58.744 36.000 0.00 0.00 37.91 2.17
505 542 7.410174 AGTGGTCATTTGGGACTTATGAAATA 58.590 34.615 0.00 0.00 37.91 1.40
506 543 7.893302 AGTGGTCATTTGGGACTTATGAAATAA 59.107 33.333 0.00 0.00 37.24 1.40
522 559 6.935240 TGAAATAAGACTCTCAAGAAGGGA 57.065 37.500 0.00 0.00 0.00 4.20
523 560 6.702329 TGAAATAAGACTCTCAAGAAGGGAC 58.298 40.000 0.00 0.00 0.00 4.46
543 580 7.602868 AGGGACTTATAGGGACTTATAGTTGT 58.397 38.462 0.00 0.00 34.75 3.32
544 581 8.740512 AGGGACTTATAGGGACTTATAGTTGTA 58.259 37.037 0.00 0.00 34.75 2.41
545 582 9.372189 GGGACTTATAGGGACTTATAGTTGTAA 57.628 37.037 0.00 0.00 41.75 2.41
554 591 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
585 622 7.074653 ACTTATAAGTCTCAGGAACCAAACA 57.925 36.000 12.50 0.00 32.86 2.83
586 623 7.162082 ACTTATAAGTCTCAGGAACCAAACAG 58.838 38.462 12.50 0.00 32.86 3.16
587 624 2.938956 AGTCTCAGGAACCAAACAGG 57.061 50.000 0.00 0.00 45.67 4.00
601 638 5.959618 CCAAACAGGTAGGGACTTTTTAG 57.040 43.478 0.00 0.00 41.75 1.85
602 639 4.765339 CCAAACAGGTAGGGACTTTTTAGG 59.235 45.833 0.00 0.00 41.75 2.69
603 640 4.652679 AACAGGTAGGGACTTTTTAGGG 57.347 45.455 0.00 0.00 41.75 3.53
604 641 3.878086 ACAGGTAGGGACTTTTTAGGGA 58.122 45.455 0.00 0.00 41.75 4.20
605 642 3.586174 ACAGGTAGGGACTTTTTAGGGAC 59.414 47.826 0.00 0.00 41.75 4.46
606 643 3.844804 CAGGTAGGGACTTTTTAGGGACT 59.155 47.826 0.00 0.00 41.75 3.85
607 644 4.288887 CAGGTAGGGACTTTTTAGGGACTT 59.711 45.833 0.00 0.00 39.49 3.01
608 645 4.288887 AGGTAGGGACTTTTTAGGGACTTG 59.711 45.833 0.00 0.00 39.49 3.16
609 646 3.808834 AGGGACTTTTTAGGGACTTGG 57.191 47.619 0.00 0.00 34.75 3.61
610 647 2.378886 AGGGACTTTTTAGGGACTTGGG 59.621 50.000 0.00 0.00 34.75 4.12
611 648 2.377531 GGGACTTTTTAGGGACTTGGGA 59.622 50.000 0.00 0.00 41.75 4.37
612 649 3.418995 GGACTTTTTAGGGACTTGGGAC 58.581 50.000 0.00 0.00 41.75 4.46
613 650 3.074094 GGACTTTTTAGGGACTTGGGACT 59.926 47.826 0.00 0.00 41.75 3.85
614 651 4.447325 GGACTTTTTAGGGACTTGGGACTT 60.447 45.833 0.00 0.00 41.75 3.01
615 652 5.138276 GACTTTTTAGGGACTTGGGACTTT 58.862 41.667 0.00 0.00 41.75 2.66
616 653 5.525484 ACTTTTTAGGGACTTGGGACTTTT 58.475 37.500 0.00 0.00 41.75 2.27
617 654 6.675565 ACTTTTTAGGGACTTGGGACTTTTA 58.324 36.000 0.00 0.00 41.75 1.52
618 655 7.127405 ACTTTTTAGGGACTTGGGACTTTTAA 58.873 34.615 0.00 0.00 41.75 1.52
619 656 7.287005 ACTTTTTAGGGACTTGGGACTTTTAAG 59.713 37.037 0.00 0.00 41.75 1.85
620 657 5.917545 TTAGGGACTTGGGACTTTTAAGT 57.082 39.130 0.00 0.00 40.66 2.24
621 658 4.808767 AGGGACTTGGGACTTTTAAGTT 57.191 40.909 0.00 0.00 34.84 2.66
622 659 4.470602 AGGGACTTGGGACTTTTAAGTTG 58.529 43.478 0.00 0.00 34.84 3.16
623 660 3.572682 GGGACTTGGGACTTTTAAGTTGG 59.427 47.826 0.00 0.00 39.88 3.77
624 661 3.572682 GGACTTGGGACTTTTAAGTTGGG 59.427 47.826 0.00 0.00 39.88 4.12
625 662 4.466827 GACTTGGGACTTTTAAGTTGGGA 58.533 43.478 0.00 0.00 39.88 4.37
626 663 4.212716 ACTTGGGACTTTTAAGTTGGGAC 58.787 43.478 0.00 0.00 39.88 4.46
627 664 4.079385 ACTTGGGACTTTTAAGTTGGGACT 60.079 41.667 0.00 0.00 39.88 3.85
628 665 5.133153 ACTTGGGACTTTTAAGTTGGGACTA 59.867 40.000 0.00 0.00 39.88 2.59
629 666 5.649970 TGGGACTTTTAAGTTGGGACTAA 57.350 39.130 0.00 0.00 39.88 2.24
630 667 6.015991 TGGGACTTTTAAGTTGGGACTAAA 57.984 37.500 0.00 0.00 39.88 1.85
631 668 6.433441 TGGGACTTTTAAGTTGGGACTAAAA 58.567 36.000 0.00 0.00 39.88 1.52
632 669 6.896307 TGGGACTTTTAAGTTGGGACTAAAAA 59.104 34.615 0.00 0.00 39.88 1.94
655 692 8.950007 AAAAAGTCCTAGGATTTATGAACCAA 57.050 30.769 18.98 0.00 0.00 3.67
656 693 8.950007 AAAAGTCCTAGGATTTATGAACCAAA 57.050 30.769 18.98 0.00 0.00 3.28
657 694 7.939784 AAGTCCTAGGATTTATGAACCAAAC 57.060 36.000 17.39 0.00 0.00 2.93
658 695 7.027874 AGTCCTAGGATTTATGAACCAAACA 57.972 36.000 16.27 0.00 0.00 2.83
659 696 7.112779 AGTCCTAGGATTTATGAACCAAACAG 58.887 38.462 16.27 0.00 0.00 3.16
660 697 6.318900 GTCCTAGGATTTATGAACCAAACAGG 59.681 42.308 16.27 0.00 45.67 4.00
661 698 5.594317 CCTAGGATTTATGAACCAAACAGGG 59.406 44.000 1.05 0.00 43.89 4.45
662 699 3.769300 AGGATTTATGAACCAAACAGGGC 59.231 43.478 0.00 0.00 43.89 5.19
663 700 3.118775 GGATTTATGAACCAAACAGGGCC 60.119 47.826 0.00 0.00 43.89 5.80
664 701 2.990740 TTATGAACCAAACAGGGCCT 57.009 45.000 0.00 0.00 43.89 5.19
665 702 2.990740 TATGAACCAAACAGGGCCTT 57.009 45.000 1.32 0.00 43.89 4.35
666 703 2.990740 ATGAACCAAACAGGGCCTTA 57.009 45.000 1.32 0.00 43.89 2.69
667 704 2.286365 TGAACCAAACAGGGCCTTAG 57.714 50.000 1.32 0.00 43.89 2.18
668 705 0.888619 GAACCAAACAGGGCCTTAGC 59.111 55.000 1.32 0.00 43.89 3.09
669 706 0.187361 AACCAAACAGGGCCTTAGCA 59.813 50.000 1.32 0.00 43.89 3.49
670 707 0.187361 ACCAAACAGGGCCTTAGCAA 59.813 50.000 1.32 0.00 43.89 3.91
671 708 1.337118 CCAAACAGGGCCTTAGCAAA 58.663 50.000 1.32 0.00 42.56 3.68
672 709 1.691434 CCAAACAGGGCCTTAGCAAAA 59.309 47.619 1.32 0.00 42.56 2.44
673 710 2.547855 CCAAACAGGGCCTTAGCAAAAC 60.548 50.000 1.32 0.00 42.56 2.43
674 711 2.365293 CAAACAGGGCCTTAGCAAAACT 59.635 45.455 1.32 0.00 42.56 2.66
675 712 1.620822 ACAGGGCCTTAGCAAAACTG 58.379 50.000 1.32 0.00 42.56 3.16
676 713 1.144913 ACAGGGCCTTAGCAAAACTGA 59.855 47.619 1.32 0.00 42.56 3.41
677 714 2.225117 ACAGGGCCTTAGCAAAACTGAT 60.225 45.455 1.32 0.00 42.56 2.90
678 715 2.827921 CAGGGCCTTAGCAAAACTGATT 59.172 45.455 1.32 0.00 42.56 2.57
679 716 2.827921 AGGGCCTTAGCAAAACTGATTG 59.172 45.455 0.00 0.00 42.56 2.67
680 717 2.094026 GGGCCTTAGCAAAACTGATTGG 60.094 50.000 0.84 0.00 42.56 3.16
681 718 2.094026 GGCCTTAGCAAAACTGATTGGG 60.094 50.000 0.00 0.00 42.56 4.12
682 719 2.825532 GCCTTAGCAAAACTGATTGGGA 59.174 45.455 0.00 0.00 39.53 4.37
683 720 3.258123 GCCTTAGCAAAACTGATTGGGAA 59.742 43.478 0.00 0.00 39.53 3.97
684 721 4.262420 GCCTTAGCAAAACTGATTGGGAAA 60.262 41.667 0.00 0.00 39.53 3.13
685 722 5.473039 CCTTAGCAAAACTGATTGGGAAAG 58.527 41.667 0.00 0.00 0.00 2.62
689 726 3.557686 GCAAAACTGATTGGGAAAGCCAT 60.558 43.478 0.00 0.00 35.15 4.40
714 751 4.142038 ACAACTTGGGTACTCAATTGACC 58.858 43.478 24.86 5.11 0.00 4.02
754 791 9.478768 TGTAAAATCAACATCTACACGTAGAAA 57.521 29.630 10.78 0.00 44.44 2.52
761 798 4.798907 ACATCTACACGTAGAAATCTTGCG 59.201 41.667 10.78 5.83 44.44 4.85
764 801 0.989164 CACGTAGAAATCTTGCGCGA 59.011 50.000 12.10 0.00 0.00 5.87
784 821 2.353376 GCGCGCACACACAAACAT 60.353 55.556 29.10 0.00 0.00 2.71
785 822 1.943693 GCGCGCACACACAAACATT 60.944 52.632 29.10 0.00 0.00 2.71
786 823 1.838754 CGCGCACACACAAACATTG 59.161 52.632 8.75 0.00 0.00 2.82
787 824 0.865218 CGCGCACACACAAACATTGT 60.865 50.000 8.75 0.00 46.75 2.71
788 825 1.276415 GCGCACACACAAACATTGTT 58.724 45.000 0.30 0.00 43.23 2.83
789 826 1.658095 GCGCACACACAAACATTGTTT 59.342 42.857 8.97 8.97 43.23 2.83
790 827 2.854777 GCGCACACACAAACATTGTTTA 59.145 40.909 14.13 0.00 43.23 2.01
793 830 5.386933 GCGCACACACAAACATTGTTTATAC 60.387 40.000 14.13 0.87 43.23 1.47
794 831 5.164330 CGCACACACAAACATTGTTTATACG 60.164 40.000 14.13 5.30 43.23 3.06
795 832 5.683743 GCACACACAAACATTGTTTATACGT 59.316 36.000 14.13 5.90 43.23 3.57
796 833 6.129561 GCACACACAAACATTGTTTATACGTC 60.130 38.462 14.13 0.00 43.23 4.34
798 835 7.111455 CACACACAAACATTGTTTATACGTCAG 59.889 37.037 14.13 2.98 43.23 3.51
799 836 6.086241 CACACAAACATTGTTTATACGTCAGC 59.914 38.462 14.13 0.00 43.23 4.26
800 837 5.567534 CACAAACATTGTTTATACGTCAGCC 59.432 40.000 14.13 0.00 43.23 4.85
801 838 4.957759 AACATTGTTTATACGTCAGCCC 57.042 40.909 0.00 0.00 0.00 5.19
823 1060 5.397447 CCCTTTATCTTGCTGGTGGTATACA 60.397 44.000 5.01 0.00 0.00 2.29
874 1130 1.746615 GTCCACACGATGCATGGCT 60.747 57.895 2.46 0.00 33.20 4.75
875 1131 0.461870 GTCCACACGATGCATGGCTA 60.462 55.000 2.46 0.00 33.20 3.93
876 1132 0.179076 TCCACACGATGCATGGCTAG 60.179 55.000 2.46 0.00 33.20 3.42
877 1133 1.645455 CACACGATGCATGGCTAGC 59.355 57.895 2.46 6.04 0.00 3.42
879 1135 0.392863 ACACGATGCATGGCTAGCAA 60.393 50.000 18.24 5.37 46.27 3.91
880 1136 0.306840 CACGATGCATGGCTAGCAAG 59.693 55.000 18.24 6.49 46.27 4.01
1032 1296 1.332375 CTCGTCGTCATCCTCCTCTTC 59.668 57.143 0.00 0.00 0.00 2.87
1117 1384 3.869481 GGCACTTGGAGCCCAAAA 58.131 55.556 7.87 0.00 46.50 2.44
1147 1414 0.974010 TGGCCTCAAGGGTACGTAGG 60.974 60.000 3.32 0.00 37.43 3.18
1187 1461 1.935873 CAAATCGATCAGCGTCCATGT 59.064 47.619 0.00 0.00 41.80 3.21
1191 1482 0.786581 CGATCAGCGTCCATGTATGC 59.213 55.000 0.00 0.00 34.64 3.14
1197 1488 0.934496 GCGTCCATGTATGCGCTAAA 59.066 50.000 9.73 0.00 45.48 1.85
1204 1495 2.036958 TGTATGCGCTAAACCATGCT 57.963 45.000 9.73 0.00 0.00 3.79
1213 1504 3.485877 CGCTAAACCATGCTAGCTTGTTC 60.486 47.826 24.31 9.55 38.72 3.18
1642 3336 3.998672 TTCGACCCCAGCACGTCC 61.999 66.667 0.00 0.00 0.00 4.79
1843 3561 2.736995 CGCAGCTTTCGGTTCGGA 60.737 61.111 0.00 0.00 0.00 4.55
1972 3699 0.970937 CCTTCTCCTACTGCGTCCCA 60.971 60.000 0.00 0.00 0.00 4.37
2194 3952 3.857854 GTCATCACGCAGCTGCCG 61.858 66.667 32.07 26.91 37.91 5.69
2404 4162 2.268920 GGATGCCTCGCCTTCACA 59.731 61.111 0.00 0.00 0.00 3.58
2541 4299 1.105167 TCGTCGGCGACATAATCCCT 61.105 55.000 35.62 0.00 42.81 4.20
2681 4719 5.181056 CCAGTAATAATCATGCGGCATTGTA 59.819 40.000 13.81 6.13 0.00 2.41
2695 4733 2.163613 GCATTGTAGTTGTAGGGGTTGC 59.836 50.000 0.00 0.00 0.00 4.17
2698 4736 2.331166 TGTAGTTGTAGGGGTTGCTCA 58.669 47.619 0.00 0.00 0.00 4.26
2736 4774 2.294791 CCGGGAACAACAATTTACTGCA 59.705 45.455 0.00 0.00 0.00 4.41
2804 4843 2.564771 CTCTGTGGTTCTTGAACAGCA 58.435 47.619 14.38 10.91 40.89 4.41
2829 4868 0.909610 TACCAGTGCCCCCTCTTCAG 60.910 60.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.716050 CGTCTCTGTGTTCGTGTCATG 59.284 52.381 0.00 0.00 0.00 3.07
10 11 1.607148 TCGTCTCTGTGTTCGTGTCAT 59.393 47.619 0.00 0.00 0.00 3.06
21 22 2.291670 ACCATTCTACCCTCGTCTCTGT 60.292 50.000 0.00 0.00 0.00 3.41
23 24 2.657143 GACCATTCTACCCTCGTCTCT 58.343 52.381 0.00 0.00 0.00 3.10
29 30 2.095161 CGCTATCGACCATTCTACCCTC 60.095 54.545 0.00 0.00 38.10 4.30
32 33 1.269998 AGCGCTATCGACCATTCTACC 59.730 52.381 8.99 0.00 38.10 3.18
34 35 1.954382 ACAGCGCTATCGACCATTCTA 59.046 47.619 10.99 0.00 38.10 2.10
39 40 1.725557 GAGGACAGCGCTATCGACCA 61.726 60.000 10.99 0.00 38.10 4.02
57 58 1.706287 CTGACGACGAGCCTCATCGA 61.706 60.000 17.86 0.00 45.56 3.59
67 68 0.593008 CAACGTGTTCCTGACGACGA 60.593 55.000 0.00 0.00 39.21 4.20
68 69 1.545614 CCAACGTGTTCCTGACGACG 61.546 60.000 0.00 0.00 39.21 5.12
69 70 0.249155 TCCAACGTGTTCCTGACGAC 60.249 55.000 0.00 0.00 39.21 4.34
70 71 0.677288 ATCCAACGTGTTCCTGACGA 59.323 50.000 0.00 0.00 39.21 4.20
123 124 1.272760 TGGTTGTTGTCACCCCTTTGT 60.273 47.619 0.00 0.00 0.00 2.83
146 183 1.719600 GAGCTCTGTTGAATGCGAGT 58.280 50.000 6.43 0.00 0.00 4.18
157 194 1.603172 CGTTTCCAGTTCGAGCTCTGT 60.603 52.381 12.85 0.00 0.00 3.41
158 195 1.063806 CGTTTCCAGTTCGAGCTCTG 58.936 55.000 12.85 5.69 0.00 3.35
159 196 0.038159 CCGTTTCCAGTTCGAGCTCT 60.038 55.000 12.85 0.00 0.00 4.09
160 197 1.014564 CCCGTTTCCAGTTCGAGCTC 61.015 60.000 2.73 2.73 0.00 4.09
161 198 1.004918 CCCGTTTCCAGTTCGAGCT 60.005 57.895 0.00 0.00 0.00 4.09
162 199 2.033194 CCCCGTTTCCAGTTCGAGC 61.033 63.158 0.00 0.00 0.00 5.03
163 200 0.669625 GTCCCCGTTTCCAGTTCGAG 60.670 60.000 0.00 0.00 0.00 4.04
164 201 1.368579 GTCCCCGTTTCCAGTTCGA 59.631 57.895 0.00 0.00 0.00 3.71
165 202 2.025418 CGTCCCCGTTTCCAGTTCG 61.025 63.158 0.00 0.00 0.00 3.95
166 203 2.322830 GCGTCCCCGTTTCCAGTTC 61.323 63.158 0.00 0.00 36.15 3.01
167 204 2.281276 GCGTCCCCGTTTCCAGTT 60.281 61.111 0.00 0.00 36.15 3.16
168 205 4.324991 GGCGTCCCCGTTTCCAGT 62.325 66.667 0.00 0.00 36.15 4.00
212 249 4.395542 AGTCGACTAACATCTAGACACACC 59.604 45.833 18.46 0.00 0.00 4.16
213 250 5.121925 TCAGTCGACTAACATCTAGACACAC 59.878 44.000 19.57 0.00 0.00 3.82
214 251 5.243207 TCAGTCGACTAACATCTAGACACA 58.757 41.667 19.57 0.00 0.00 3.72
215 252 5.581479 TCTCAGTCGACTAACATCTAGACAC 59.419 44.000 19.57 0.00 0.00 3.67
216 253 5.581479 GTCTCAGTCGACTAACATCTAGACA 59.419 44.000 19.57 0.00 32.03 3.41
217 254 5.813672 AGTCTCAGTCGACTAACATCTAGAC 59.186 44.000 19.57 18.94 42.19 2.59
218 255 5.979993 AGTCTCAGTCGACTAACATCTAGA 58.020 41.667 19.57 7.76 42.19 2.43
219 256 6.671614 AAGTCTCAGTCGACTAACATCTAG 57.328 41.667 19.57 3.12 43.14 2.43
220 257 7.065563 GGTTAAGTCTCAGTCGACTAACATCTA 59.934 40.741 19.57 3.73 43.14 1.98
221 258 6.127952 GGTTAAGTCTCAGTCGACTAACATCT 60.128 42.308 19.57 10.27 43.14 2.90
222 259 6.028987 GGTTAAGTCTCAGTCGACTAACATC 58.971 44.000 19.57 8.15 43.14 3.06
223 260 5.475909 TGGTTAAGTCTCAGTCGACTAACAT 59.524 40.000 19.57 12.03 43.14 2.71
224 261 4.823442 TGGTTAAGTCTCAGTCGACTAACA 59.177 41.667 19.57 6.01 43.14 2.41
225 262 5.368256 TGGTTAAGTCTCAGTCGACTAAC 57.632 43.478 19.57 16.21 43.14 2.34
226 263 5.533903 ACTTGGTTAAGTCTCAGTCGACTAA 59.466 40.000 19.57 1.94 43.53 2.24
227 264 5.068636 ACTTGGTTAAGTCTCAGTCGACTA 58.931 41.667 19.57 0.00 43.53 2.59
228 265 3.890147 ACTTGGTTAAGTCTCAGTCGACT 59.110 43.478 13.58 13.58 43.53 4.18
229 266 4.240175 ACTTGGTTAAGTCTCAGTCGAC 57.760 45.455 7.70 7.70 43.53 4.20
240 277 3.815401 CACTTGACTGGGACTTGGTTAAG 59.185 47.826 0.00 0.00 39.86 1.85
241 278 3.456644 TCACTTGACTGGGACTTGGTTAA 59.543 43.478 0.00 0.00 0.00 2.01
242 279 3.042682 TCACTTGACTGGGACTTGGTTA 58.957 45.455 0.00 0.00 0.00 2.85
243 280 1.843851 TCACTTGACTGGGACTTGGTT 59.156 47.619 0.00 0.00 0.00 3.67
244 281 1.507140 TCACTTGACTGGGACTTGGT 58.493 50.000 0.00 0.00 0.00 3.67
245 282 2.867109 ATCACTTGACTGGGACTTGG 57.133 50.000 0.00 0.00 0.00 3.61
246 283 4.248859 CACTATCACTTGACTGGGACTTG 58.751 47.826 0.00 0.00 0.00 3.16
247 284 3.904339 ACACTATCACTTGACTGGGACTT 59.096 43.478 0.00 0.00 0.00 3.01
248 285 3.511477 ACACTATCACTTGACTGGGACT 58.489 45.455 0.00 0.00 0.00 3.85
249 286 3.963428 ACACTATCACTTGACTGGGAC 57.037 47.619 0.00 0.00 0.00 4.46
250 287 6.267699 CCATATACACTATCACTTGACTGGGA 59.732 42.308 0.00 0.00 0.00 4.37
251 288 6.267699 TCCATATACACTATCACTTGACTGGG 59.732 42.308 0.00 0.00 0.00 4.45
252 289 7.290110 TCCATATACACTATCACTTGACTGG 57.710 40.000 0.00 0.00 0.00 4.00
253 290 9.254133 CTTTCCATATACACTATCACTTGACTG 57.746 37.037 0.00 0.00 0.00 3.51
254 291 9.201989 TCTTTCCATATACACTATCACTTGACT 57.798 33.333 0.00 0.00 0.00 3.41
255 292 9.817809 TTCTTTCCATATACACTATCACTTGAC 57.182 33.333 0.00 0.00 0.00 3.18
272 309 9.166173 CTTTTCAGTTTTCCTTTTTCTTTCCAT 57.834 29.630 0.00 0.00 0.00 3.41
273 310 8.371699 TCTTTTCAGTTTTCCTTTTTCTTTCCA 58.628 29.630 0.00 0.00 0.00 3.53
274 311 8.771920 TCTTTTCAGTTTTCCTTTTTCTTTCC 57.228 30.769 0.00 0.00 0.00 3.13
302 339 9.502145 GATATTGCATTGAGATTCGTACAAAAA 57.498 29.630 0.00 0.00 0.00 1.94
303 340 8.672815 TGATATTGCATTGAGATTCGTACAAAA 58.327 29.630 0.00 0.00 0.00 2.44
304 341 8.207521 TGATATTGCATTGAGATTCGTACAAA 57.792 30.769 0.00 0.00 0.00 2.83
305 342 7.784633 TGATATTGCATTGAGATTCGTACAA 57.215 32.000 0.00 0.00 0.00 2.41
306 343 7.784633 TTGATATTGCATTGAGATTCGTACA 57.215 32.000 0.00 0.00 0.00 2.90
307 344 7.747799 CCATTGATATTGCATTGAGATTCGTAC 59.252 37.037 0.00 0.00 0.00 3.67
308 345 7.661027 TCCATTGATATTGCATTGAGATTCGTA 59.339 33.333 0.00 0.00 0.00 3.43
309 346 6.487668 TCCATTGATATTGCATTGAGATTCGT 59.512 34.615 0.00 0.00 0.00 3.85
310 347 6.905578 TCCATTGATATTGCATTGAGATTCG 58.094 36.000 0.00 0.00 0.00 3.34
313 350 9.304335 TGTATTCCATTGATATTGCATTGAGAT 57.696 29.630 0.00 0.00 0.00 2.75
314 351 8.694581 TGTATTCCATTGATATTGCATTGAGA 57.305 30.769 0.00 0.00 0.00 3.27
315 352 9.188588 GTTGTATTCCATTGATATTGCATTGAG 57.811 33.333 0.00 0.00 0.00 3.02
316 353 8.693625 TGTTGTATTCCATTGATATTGCATTGA 58.306 29.630 0.00 0.00 0.00 2.57
317 354 8.874744 TGTTGTATTCCATTGATATTGCATTG 57.125 30.769 0.00 0.00 0.00 2.82
318 355 9.701098 GATGTTGTATTCCATTGATATTGCATT 57.299 29.630 0.00 0.00 0.00 3.56
319 356 8.024865 CGATGTTGTATTCCATTGATATTGCAT 58.975 33.333 0.00 0.00 0.00 3.96
320 357 7.228308 TCGATGTTGTATTCCATTGATATTGCA 59.772 33.333 0.00 0.00 0.00 4.08
321 358 7.535258 GTCGATGTTGTATTCCATTGATATTGC 59.465 37.037 0.00 0.00 34.76 3.56
322 359 8.777413 AGTCGATGTTGTATTCCATTGATATTG 58.223 33.333 0.00 0.00 34.76 1.90
323 360 8.777413 CAGTCGATGTTGTATTCCATTGATATT 58.223 33.333 0.00 0.00 34.76 1.28
324 361 8.150296 TCAGTCGATGTTGTATTCCATTGATAT 58.850 33.333 0.00 0.00 34.76 1.63
325 362 7.496747 TCAGTCGATGTTGTATTCCATTGATA 58.503 34.615 0.00 0.00 34.76 2.15
326 363 6.348498 TCAGTCGATGTTGTATTCCATTGAT 58.652 36.000 0.00 0.00 34.76 2.57
327 364 5.729510 TCAGTCGATGTTGTATTCCATTGA 58.270 37.500 0.00 0.00 0.00 2.57
328 365 6.421377 TTCAGTCGATGTTGTATTCCATTG 57.579 37.500 0.00 0.00 0.00 2.82
329 366 6.429692 TGTTTCAGTCGATGTTGTATTCCATT 59.570 34.615 0.00 0.00 0.00 3.16
330 367 5.937540 TGTTTCAGTCGATGTTGTATTCCAT 59.062 36.000 0.00 0.00 0.00 3.41
331 368 5.301555 TGTTTCAGTCGATGTTGTATTCCA 58.698 37.500 0.00 0.00 0.00 3.53
332 369 5.856126 TGTTTCAGTCGATGTTGTATTCC 57.144 39.130 0.00 0.00 0.00 3.01
333 370 9.425893 CATTATGTTTCAGTCGATGTTGTATTC 57.574 33.333 0.00 0.00 0.00 1.75
334 371 9.161629 TCATTATGTTTCAGTCGATGTTGTATT 57.838 29.630 0.00 0.00 0.00 1.89
335 372 8.716646 TCATTATGTTTCAGTCGATGTTGTAT 57.283 30.769 0.00 0.00 0.00 2.29
336 373 8.541133 TTCATTATGTTTCAGTCGATGTTGTA 57.459 30.769 0.00 0.00 0.00 2.41
337 374 7.173218 ACTTCATTATGTTTCAGTCGATGTTGT 59.827 33.333 0.00 0.00 0.00 3.32
338 375 7.521529 ACTTCATTATGTTTCAGTCGATGTTG 58.478 34.615 0.00 0.00 0.00 3.33
339 376 7.604164 AGACTTCATTATGTTTCAGTCGATGTT 59.396 33.333 0.00 0.00 36.56 2.71
340 377 7.099764 AGACTTCATTATGTTTCAGTCGATGT 58.900 34.615 0.00 0.00 36.56 3.06
341 378 7.531280 AGACTTCATTATGTTTCAGTCGATG 57.469 36.000 0.00 0.00 36.56 3.84
342 379 9.307121 CTTAGACTTCATTATGTTTCAGTCGAT 57.693 33.333 0.00 0.00 36.56 3.59
343 380 8.304596 ACTTAGACTTCATTATGTTTCAGTCGA 58.695 33.333 0.00 0.00 36.56 4.20
344 381 8.467402 ACTTAGACTTCATTATGTTTCAGTCG 57.533 34.615 0.00 0.00 36.56 4.18
345 382 8.587950 CGACTTAGACTTCATTATGTTTCAGTC 58.412 37.037 0.00 1.19 0.00 3.51
346 383 8.304596 TCGACTTAGACTTCATTATGTTTCAGT 58.695 33.333 0.00 0.00 0.00 3.41
347 384 8.587950 GTCGACTTAGACTTCATTATGTTTCAG 58.412 37.037 8.70 0.00 38.09 3.02
348 385 8.462143 GTCGACTTAGACTTCATTATGTTTCA 57.538 34.615 8.70 0.00 38.09 2.69
367 404 2.306512 ACCCTCTAAGTCTCAGTCGACT 59.693 50.000 13.58 13.58 45.73 4.18
368 405 2.420722 CACCCTCTAAGTCTCAGTCGAC 59.579 54.545 7.70 7.70 0.00 4.20
369 406 2.040012 ACACCCTCTAAGTCTCAGTCGA 59.960 50.000 0.00 0.00 0.00 4.20
370 407 2.438411 ACACCCTCTAAGTCTCAGTCG 58.562 52.381 0.00 0.00 0.00 4.18
371 408 4.039366 ACAAACACCCTCTAAGTCTCAGTC 59.961 45.833 0.00 0.00 0.00 3.51
372 409 3.967987 ACAAACACCCTCTAAGTCTCAGT 59.032 43.478 0.00 0.00 0.00 3.41
373 410 4.608948 ACAAACACCCTCTAAGTCTCAG 57.391 45.455 0.00 0.00 0.00 3.35
374 411 5.365619 GAAACAAACACCCTCTAAGTCTCA 58.634 41.667 0.00 0.00 0.00 3.27
375 412 4.755629 GGAAACAAACACCCTCTAAGTCTC 59.244 45.833 0.00 0.00 0.00 3.36
376 413 4.165372 TGGAAACAAACACCCTCTAAGTCT 59.835 41.667 0.00 0.00 37.44 3.24
377 414 4.457466 TGGAAACAAACACCCTCTAAGTC 58.543 43.478 0.00 0.00 37.44 3.01
378 415 4.461198 CTGGAAACAAACACCCTCTAAGT 58.539 43.478 0.00 0.00 42.06 2.24
379 416 3.821033 CCTGGAAACAAACACCCTCTAAG 59.179 47.826 0.00 0.00 42.06 2.18
380 417 3.435890 CCCTGGAAACAAACACCCTCTAA 60.436 47.826 0.00 0.00 42.06 2.10
381 418 2.107552 CCCTGGAAACAAACACCCTCTA 59.892 50.000 0.00 0.00 42.06 2.43
382 419 1.133482 CCCTGGAAACAAACACCCTCT 60.133 52.381 0.00 0.00 42.06 3.69
383 420 1.133606 TCCCTGGAAACAAACACCCTC 60.134 52.381 0.00 0.00 42.06 4.30
384 421 0.930726 TCCCTGGAAACAAACACCCT 59.069 50.000 0.00 0.00 42.06 4.34
385 422 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
386 423 2.067365 AGTCCCTGGAAACAAACACC 57.933 50.000 0.00 0.00 42.06 4.16
387 424 5.508994 CCAATAAGTCCCTGGAAACAAACAC 60.509 44.000 0.00 0.00 42.06 3.32
388 425 4.586841 CCAATAAGTCCCTGGAAACAAACA 59.413 41.667 0.00 0.00 42.06 2.83
389 426 4.587262 ACCAATAAGTCCCTGGAAACAAAC 59.413 41.667 0.00 0.00 42.06 2.93
390 427 4.810345 ACCAATAAGTCCCTGGAAACAAA 58.190 39.130 0.00 0.00 42.06 2.83
391 428 4.105697 AGACCAATAAGTCCCTGGAAACAA 59.894 41.667 0.00 0.00 37.41 2.83
392 429 3.655777 AGACCAATAAGTCCCTGGAAACA 59.344 43.478 0.00 0.00 37.49 2.83
393 430 4.302559 AGACCAATAAGTCCCTGGAAAC 57.697 45.455 0.00 0.00 37.49 2.78
394 431 4.473559 CCTAGACCAATAAGTCCCTGGAAA 59.526 45.833 0.00 0.00 37.49 3.13
395 432 4.037927 CCTAGACCAATAAGTCCCTGGAA 58.962 47.826 0.00 0.00 37.49 3.53
396 433 3.632645 CCCTAGACCAATAAGTCCCTGGA 60.633 52.174 0.00 0.00 37.49 3.86
397 434 2.706190 CCCTAGACCAATAAGTCCCTGG 59.294 54.545 0.00 0.00 37.49 4.45
398 435 3.388350 GTCCCTAGACCAATAAGTCCCTG 59.612 52.174 0.00 0.00 37.49 4.45
399 436 3.275228 AGTCCCTAGACCAATAAGTCCCT 59.725 47.826 0.00 0.00 44.72 4.20
400 437 3.655384 AGTCCCTAGACCAATAAGTCCC 58.345 50.000 0.00 0.00 44.72 4.46
401 438 6.803366 TTAAGTCCCTAGACCAATAAGTCC 57.197 41.667 0.00 0.00 44.72 3.85
427 464 9.661954 TGATTTAGATGGGACTTATAGAGACTT 57.338 33.333 0.00 0.00 0.00 3.01
428 465 9.661954 TTGATTTAGATGGGACTTATAGAGACT 57.338 33.333 0.00 0.00 0.00 3.24
433 470 9.277783 CCTGTTTGATTTAGATGGGACTTATAG 57.722 37.037 0.00 0.00 0.00 1.31
434 471 8.998814 TCCTGTTTGATTTAGATGGGACTTATA 58.001 33.333 0.00 0.00 0.00 0.98
435 472 7.872138 TCCTGTTTGATTTAGATGGGACTTAT 58.128 34.615 0.00 0.00 0.00 1.73
436 473 7.265599 TCCTGTTTGATTTAGATGGGACTTA 57.734 36.000 0.00 0.00 0.00 2.24
437 474 6.139679 TCCTGTTTGATTTAGATGGGACTT 57.860 37.500 0.00 0.00 0.00 3.01
438 475 5.339530 CCTCCTGTTTGATTTAGATGGGACT 60.340 44.000 0.00 0.00 0.00 3.85
439 476 4.884164 CCTCCTGTTTGATTTAGATGGGAC 59.116 45.833 0.00 0.00 0.00 4.46
440 477 4.079787 CCCTCCTGTTTGATTTAGATGGGA 60.080 45.833 0.00 0.00 31.98 4.37
441 478 4.079787 TCCCTCCTGTTTGATTTAGATGGG 60.080 45.833 0.00 0.00 0.00 4.00
442 479 4.884164 GTCCCTCCTGTTTGATTTAGATGG 59.116 45.833 0.00 0.00 0.00 3.51
443 480 5.749462 AGTCCCTCCTGTTTGATTTAGATG 58.251 41.667 0.00 0.00 0.00 2.90
444 481 6.394345 AAGTCCCTCCTGTTTGATTTAGAT 57.606 37.500 0.00 0.00 0.00 1.98
445 482 5.843019 AAGTCCCTCCTGTTTGATTTAGA 57.157 39.130 0.00 0.00 0.00 2.10
446 483 9.331282 CTTATAAGTCCCTCCTGTTTGATTTAG 57.669 37.037 4.18 0.00 0.00 1.85
447 484 8.272173 CCTTATAAGTCCCTCCTGTTTGATTTA 58.728 37.037 11.50 0.00 0.00 1.40
448 485 7.036863 TCCTTATAAGTCCCTCCTGTTTGATTT 60.037 37.037 11.50 0.00 0.00 2.17
449 486 6.447084 TCCTTATAAGTCCCTCCTGTTTGATT 59.553 38.462 11.50 0.00 0.00 2.57
450 487 5.970640 TCCTTATAAGTCCCTCCTGTTTGAT 59.029 40.000 11.50 0.00 0.00 2.57
451 488 5.189145 GTCCTTATAAGTCCCTCCTGTTTGA 59.811 44.000 11.50 0.00 0.00 2.69
452 489 5.189934 AGTCCTTATAAGTCCCTCCTGTTTG 59.810 44.000 11.50 0.00 0.00 2.93
453 490 5.351405 AGTCCTTATAAGTCCCTCCTGTTT 58.649 41.667 11.50 0.00 0.00 2.83
454 491 4.961585 AGTCCTTATAAGTCCCTCCTGTT 58.038 43.478 11.50 0.00 0.00 3.16
455 492 4.628661 AGTCCTTATAAGTCCCTCCTGT 57.371 45.455 11.50 0.00 0.00 4.00
456 493 7.125963 ACTTTAAGTCCTTATAAGTCCCTCCTG 59.874 40.741 11.50 0.00 29.26 3.86
457 494 7.125963 CACTTTAAGTCCTTATAAGTCCCTCCT 59.874 40.741 11.50 0.00 31.03 3.69
458 495 7.273712 CACTTTAAGTCCTTATAAGTCCCTCC 58.726 42.308 11.50 0.00 31.03 4.30
459 496 7.092979 ACCACTTTAAGTCCTTATAAGTCCCTC 60.093 40.741 11.50 0.00 31.03 4.30
460 497 6.734281 ACCACTTTAAGTCCTTATAAGTCCCT 59.266 38.462 11.50 1.51 31.03 4.20
461 498 6.955364 ACCACTTTAAGTCCTTATAAGTCCC 58.045 40.000 11.50 0.00 31.03 4.46
462 499 7.618137 TGACCACTTTAAGTCCTTATAAGTCC 58.382 38.462 11.50 1.62 31.03 3.85
463 500 9.668497 AATGACCACTTTAAGTCCTTATAAGTC 57.332 33.333 11.50 4.58 31.03 3.01
466 503 9.238368 CCAAATGACCACTTTAAGTCCTTATAA 57.762 33.333 0.00 0.00 31.76 0.98
467 504 7.832187 CCCAAATGACCACTTTAAGTCCTTATA 59.168 37.037 0.00 0.00 31.76 0.98
468 505 6.663523 CCCAAATGACCACTTTAAGTCCTTAT 59.336 38.462 0.00 0.00 31.76 1.73
469 506 6.007703 CCCAAATGACCACTTTAAGTCCTTA 58.992 40.000 0.00 0.00 31.76 2.69
470 507 4.832823 CCCAAATGACCACTTTAAGTCCTT 59.167 41.667 0.00 0.00 31.76 3.36
471 508 4.105697 TCCCAAATGACCACTTTAAGTCCT 59.894 41.667 0.00 0.00 31.76 3.85
472 509 4.217767 GTCCCAAATGACCACTTTAAGTCC 59.782 45.833 0.00 0.00 31.76 3.85
473 510 5.070685 AGTCCCAAATGACCACTTTAAGTC 58.929 41.667 0.00 0.00 35.83 3.01
474 511 5.061721 AGTCCCAAATGACCACTTTAAGT 57.938 39.130 0.00 0.00 35.83 2.24
475 512 7.393234 TCATAAGTCCCAAATGACCACTTTAAG 59.607 37.037 0.00 0.00 35.83 1.85
476 513 7.235079 TCATAAGTCCCAAATGACCACTTTAA 58.765 34.615 0.00 0.00 35.83 1.52
477 514 6.785076 TCATAAGTCCCAAATGACCACTTTA 58.215 36.000 0.00 0.00 35.83 1.85
478 515 5.640147 TCATAAGTCCCAAATGACCACTTT 58.360 37.500 0.00 0.00 35.83 2.66
479 516 5.255397 TCATAAGTCCCAAATGACCACTT 57.745 39.130 0.00 0.00 35.83 3.16
480 517 4.927267 TCATAAGTCCCAAATGACCACT 57.073 40.909 0.00 0.00 35.83 4.00
481 518 5.975693 TTTCATAAGTCCCAAATGACCAC 57.024 39.130 0.00 0.00 35.83 4.16
482 519 8.112822 TCTTATTTCATAAGTCCCAAATGACCA 58.887 33.333 3.93 0.00 42.21 4.02
483 520 8.406297 GTCTTATTTCATAAGTCCCAAATGACC 58.594 37.037 3.93 0.00 42.21 4.02
484 521 9.178758 AGTCTTATTTCATAAGTCCCAAATGAC 57.821 33.333 3.93 0.00 42.21 3.06
485 522 9.396022 GAGTCTTATTTCATAAGTCCCAAATGA 57.604 33.333 3.93 0.00 42.21 2.57
486 523 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
487 524 9.620259 GAGAGTCTTATTTCATAAGTCCCAAAT 57.380 33.333 0.00 0.00 42.21 2.32
488 525 8.602424 TGAGAGTCTTATTTCATAAGTCCCAAA 58.398 33.333 0.00 0.00 42.21 3.28
489 526 8.146053 TGAGAGTCTTATTTCATAAGTCCCAA 57.854 34.615 0.00 0.00 42.21 4.12
490 527 7.733773 TGAGAGTCTTATTTCATAAGTCCCA 57.266 36.000 0.00 0.00 42.21 4.37
491 528 8.478877 TCTTGAGAGTCTTATTTCATAAGTCCC 58.521 37.037 0.00 0.00 42.21 4.46
492 529 9.877178 TTCTTGAGAGTCTTATTTCATAAGTCC 57.123 33.333 0.00 0.00 42.21 3.85
494 531 9.883142 CCTTCTTGAGAGTCTTATTTCATAAGT 57.117 33.333 0.00 0.00 42.21 2.24
495 532 9.323985 CCCTTCTTGAGAGTCTTATTTCATAAG 57.676 37.037 0.00 0.00 42.78 1.73
496 533 9.046846 TCCCTTCTTGAGAGTCTTATTTCATAA 57.953 33.333 0.00 0.00 0.00 1.90
497 534 8.478877 GTCCCTTCTTGAGAGTCTTATTTCATA 58.521 37.037 0.00 0.00 0.00 2.15
498 535 7.181845 AGTCCCTTCTTGAGAGTCTTATTTCAT 59.818 37.037 0.00 0.00 0.00 2.57
499 536 6.498651 AGTCCCTTCTTGAGAGTCTTATTTCA 59.501 38.462 0.00 0.00 0.00 2.69
500 537 6.941857 AGTCCCTTCTTGAGAGTCTTATTTC 58.058 40.000 0.00 0.00 0.00 2.17
501 538 6.943899 AGTCCCTTCTTGAGAGTCTTATTT 57.056 37.500 0.00 0.00 0.00 1.40
502 539 6.943899 AAGTCCCTTCTTGAGAGTCTTATT 57.056 37.500 0.00 0.00 0.00 1.40
503 540 9.362151 CTATAAGTCCCTTCTTGAGAGTCTTAT 57.638 37.037 0.00 0.00 32.14 1.73
504 541 7.780745 CCTATAAGTCCCTTCTTGAGAGTCTTA 59.219 40.741 0.00 0.00 0.00 2.10
505 542 6.609616 CCTATAAGTCCCTTCTTGAGAGTCTT 59.390 42.308 0.00 0.00 0.00 3.01
506 543 6.133356 CCTATAAGTCCCTTCTTGAGAGTCT 58.867 44.000 0.00 0.00 0.00 3.24
507 544 5.303333 CCCTATAAGTCCCTTCTTGAGAGTC 59.697 48.000 0.00 0.00 0.00 3.36
508 545 5.043281 TCCCTATAAGTCCCTTCTTGAGAGT 60.043 44.000 0.00 0.00 0.00 3.24
509 546 5.303333 GTCCCTATAAGTCCCTTCTTGAGAG 59.697 48.000 0.00 0.00 0.00 3.20
510 547 5.043281 AGTCCCTATAAGTCCCTTCTTGAGA 60.043 44.000 0.00 0.00 0.00 3.27
511 548 5.212745 AGTCCCTATAAGTCCCTTCTTGAG 58.787 45.833 0.00 0.00 0.00 3.02
512 549 5.222278 AGTCCCTATAAGTCCCTTCTTGA 57.778 43.478 0.00 0.00 0.00 3.02
513 550 5.959583 AAGTCCCTATAAGTCCCTTCTTG 57.040 43.478 0.00 0.00 0.00 3.02
514 551 8.521301 ACTATAAGTCCCTATAAGTCCCTTCTT 58.479 37.037 0.00 0.00 0.00 2.52
515 552 8.071235 ACTATAAGTCCCTATAAGTCCCTTCT 57.929 38.462 0.00 0.00 0.00 2.85
516 553 8.586744 CAACTATAAGTCCCTATAAGTCCCTTC 58.413 40.741 0.00 0.00 0.00 3.46
517 554 8.072480 ACAACTATAAGTCCCTATAAGTCCCTT 58.928 37.037 0.00 0.00 0.00 3.95
518 555 7.602868 ACAACTATAAGTCCCTATAAGTCCCT 58.397 38.462 0.00 0.00 0.00 4.20
519 556 7.852550 ACAACTATAAGTCCCTATAAGTCCC 57.147 40.000 0.00 0.00 0.00 4.46
528 565 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
561 598 7.074653 TGTTTGGTTCCTGAGACTTATAAGT 57.925 36.000 18.05 18.05 43.16 2.24
562 599 6.595716 CCTGTTTGGTTCCTGAGACTTATAAG 59.404 42.308 11.05 11.05 0.00 1.73
563 600 6.472887 CCTGTTTGGTTCCTGAGACTTATAA 58.527 40.000 0.00 0.00 0.00 0.98
564 601 6.049955 CCTGTTTGGTTCCTGAGACTTATA 57.950 41.667 0.00 0.00 0.00 0.98
565 602 4.911390 CCTGTTTGGTTCCTGAGACTTAT 58.089 43.478 0.00 0.00 0.00 1.73
566 603 4.351874 CCTGTTTGGTTCCTGAGACTTA 57.648 45.455 0.00 0.00 0.00 2.24
567 604 3.214696 CCTGTTTGGTTCCTGAGACTT 57.785 47.619 0.00 0.00 0.00 3.01
568 605 2.938956 CCTGTTTGGTTCCTGAGACT 57.061 50.000 0.00 0.00 0.00 3.24
579 616 4.765339 CCTAAAAAGTCCCTACCTGTTTGG 59.235 45.833 0.00 0.00 42.93 3.28
580 617 4.765339 CCCTAAAAAGTCCCTACCTGTTTG 59.235 45.833 0.00 0.00 0.00 2.93
581 618 4.666431 TCCCTAAAAAGTCCCTACCTGTTT 59.334 41.667 0.00 0.00 0.00 2.83
582 619 4.042560 GTCCCTAAAAAGTCCCTACCTGTT 59.957 45.833 0.00 0.00 0.00 3.16
583 620 3.586174 GTCCCTAAAAAGTCCCTACCTGT 59.414 47.826 0.00 0.00 0.00 4.00
584 621 3.844804 AGTCCCTAAAAAGTCCCTACCTG 59.155 47.826 0.00 0.00 0.00 4.00
585 622 4.157668 AGTCCCTAAAAAGTCCCTACCT 57.842 45.455 0.00 0.00 0.00 3.08
586 623 4.567116 CCAAGTCCCTAAAAAGTCCCTACC 60.567 50.000 0.00 0.00 0.00 3.18
587 624 4.567116 CCCAAGTCCCTAAAAAGTCCCTAC 60.567 50.000 0.00 0.00 0.00 3.18
588 625 3.590182 CCCAAGTCCCTAAAAAGTCCCTA 59.410 47.826 0.00 0.00 0.00 3.53
589 626 2.378886 CCCAAGTCCCTAAAAAGTCCCT 59.621 50.000 0.00 0.00 0.00 4.20
590 627 2.377531 TCCCAAGTCCCTAAAAAGTCCC 59.622 50.000 0.00 0.00 0.00 4.46
591 628 3.074094 AGTCCCAAGTCCCTAAAAAGTCC 59.926 47.826 0.00 0.00 0.00 3.85
592 629 4.368565 AGTCCCAAGTCCCTAAAAAGTC 57.631 45.455 0.00 0.00 0.00 3.01
593 630 4.808767 AAGTCCCAAGTCCCTAAAAAGT 57.191 40.909 0.00 0.00 0.00 2.66
594 631 7.287005 ACTTAAAAGTCCCAAGTCCCTAAAAAG 59.713 37.037 0.00 0.00 32.86 2.27
595 632 7.127405 ACTTAAAAGTCCCAAGTCCCTAAAAA 58.873 34.615 0.00 0.00 32.86 1.94
596 633 6.675565 ACTTAAAAGTCCCAAGTCCCTAAAA 58.324 36.000 0.00 0.00 32.86 1.52
597 634 6.270219 ACTTAAAAGTCCCAAGTCCCTAAA 57.730 37.500 0.00 0.00 32.86 1.85
598 635 5.917545 ACTTAAAAGTCCCAAGTCCCTAA 57.082 39.130 0.00 0.00 32.86 2.69
599 636 5.457052 CCAACTTAAAAGTCCCAAGTCCCTA 60.457 44.000 0.00 0.00 38.57 3.53
600 637 4.470602 CAACTTAAAAGTCCCAAGTCCCT 58.529 43.478 0.00 0.00 38.57 4.20
601 638 3.572682 CCAACTTAAAAGTCCCAAGTCCC 59.427 47.826 0.00 0.00 38.57 4.46
602 639 3.572682 CCCAACTTAAAAGTCCCAAGTCC 59.427 47.826 0.00 0.00 38.57 3.85
603 640 4.277672 GTCCCAACTTAAAAGTCCCAAGTC 59.722 45.833 0.00 0.00 38.57 3.01
604 641 4.079385 AGTCCCAACTTAAAAGTCCCAAGT 60.079 41.667 0.00 0.00 38.57 3.16
605 642 4.470602 AGTCCCAACTTAAAAGTCCCAAG 58.529 43.478 0.00 0.00 38.57 3.61
606 643 4.529716 AGTCCCAACTTAAAAGTCCCAA 57.470 40.909 0.00 0.00 38.57 4.12
607 644 5.649970 TTAGTCCCAACTTAAAAGTCCCA 57.350 39.130 0.00 0.00 38.57 4.37
608 645 6.964807 TTTTAGTCCCAACTTAAAAGTCCC 57.035 37.500 0.00 0.00 38.57 4.46
630 667 8.950007 TTGGTTCATAAATCCTAGGACTTTTT 57.050 30.769 15.42 13.54 0.00 1.94
631 668 8.803235 GTTTGGTTCATAAATCCTAGGACTTTT 58.197 33.333 15.42 14.28 0.00 2.27
632 669 7.947890 TGTTTGGTTCATAAATCCTAGGACTTT 59.052 33.333 15.42 16.94 0.00 2.66
633 670 7.466804 TGTTTGGTTCATAAATCCTAGGACTT 58.533 34.615 15.42 12.90 0.00 3.01
634 671 7.027874 TGTTTGGTTCATAAATCCTAGGACT 57.972 36.000 15.42 0.00 0.00 3.85
635 672 6.318900 CCTGTTTGGTTCATAAATCCTAGGAC 59.681 42.308 15.42 0.00 0.00 3.85
636 673 6.423182 CCTGTTTGGTTCATAAATCCTAGGA 58.577 40.000 15.46 15.46 0.00 2.94
637 674 5.594317 CCCTGTTTGGTTCATAAATCCTAGG 59.406 44.000 0.82 0.82 0.00 3.02
638 675 5.067805 GCCCTGTTTGGTTCATAAATCCTAG 59.932 44.000 0.00 0.00 0.00 3.02
639 676 4.953579 GCCCTGTTTGGTTCATAAATCCTA 59.046 41.667 0.00 0.00 0.00 2.94
640 677 3.769300 GCCCTGTTTGGTTCATAAATCCT 59.231 43.478 0.00 0.00 0.00 3.24
641 678 3.118775 GGCCCTGTTTGGTTCATAAATCC 60.119 47.826 0.00 0.00 0.00 3.01
642 679 3.769300 AGGCCCTGTTTGGTTCATAAATC 59.231 43.478 0.00 0.00 0.00 2.17
643 680 3.790126 AGGCCCTGTTTGGTTCATAAAT 58.210 40.909 0.00 0.00 0.00 1.40
644 681 3.252554 AGGCCCTGTTTGGTTCATAAA 57.747 42.857 0.00 0.00 0.00 1.40
645 682 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
646 683 2.990740 AAGGCCCTGTTTGGTTCATA 57.009 45.000 0.00 0.00 0.00 2.15
647 684 2.807676 CTAAGGCCCTGTTTGGTTCAT 58.192 47.619 0.00 0.00 0.00 2.57
648 685 1.821666 GCTAAGGCCCTGTTTGGTTCA 60.822 52.381 0.00 0.00 0.00 3.18
649 686 0.888619 GCTAAGGCCCTGTTTGGTTC 59.111 55.000 0.00 0.00 0.00 3.62
650 687 0.187361 TGCTAAGGCCCTGTTTGGTT 59.813 50.000 0.00 0.00 37.74 3.67
651 688 0.187361 TTGCTAAGGCCCTGTTTGGT 59.813 50.000 0.00 0.00 37.74 3.67
652 689 1.337118 TTTGCTAAGGCCCTGTTTGG 58.663 50.000 0.00 0.00 37.74 3.28
653 690 2.365293 AGTTTTGCTAAGGCCCTGTTTG 59.635 45.455 0.00 0.00 37.74 2.93
654 691 2.365293 CAGTTTTGCTAAGGCCCTGTTT 59.635 45.455 0.00 0.00 37.74 2.83
655 692 1.963515 CAGTTTTGCTAAGGCCCTGTT 59.036 47.619 0.00 0.00 37.74 3.16
656 693 1.144913 TCAGTTTTGCTAAGGCCCTGT 59.855 47.619 0.00 0.00 37.74 4.00
657 694 1.909700 TCAGTTTTGCTAAGGCCCTG 58.090 50.000 0.00 0.00 37.74 4.45
658 695 2.827921 CAATCAGTTTTGCTAAGGCCCT 59.172 45.455 0.00 0.00 37.74 5.19
659 696 2.094026 CCAATCAGTTTTGCTAAGGCCC 60.094 50.000 0.00 0.00 37.74 5.80
660 697 2.094026 CCCAATCAGTTTTGCTAAGGCC 60.094 50.000 0.00 0.00 37.74 5.19
661 698 2.825532 TCCCAATCAGTTTTGCTAAGGC 59.174 45.455 0.00 0.00 39.26 4.35
662 699 5.467035 TTTCCCAATCAGTTTTGCTAAGG 57.533 39.130 0.00 0.00 0.00 2.69
663 700 4.925646 GCTTTCCCAATCAGTTTTGCTAAG 59.074 41.667 0.00 0.00 0.00 2.18
664 701 4.262420 GGCTTTCCCAATCAGTTTTGCTAA 60.262 41.667 0.00 0.00 0.00 3.09
665 702 3.258123 GGCTTTCCCAATCAGTTTTGCTA 59.742 43.478 0.00 0.00 0.00 3.49
666 703 2.037641 GGCTTTCCCAATCAGTTTTGCT 59.962 45.455 0.00 0.00 0.00 3.91
667 704 2.224257 TGGCTTTCCCAATCAGTTTTGC 60.224 45.455 0.00 0.00 41.82 3.68
668 705 3.749665 TGGCTTTCCCAATCAGTTTTG 57.250 42.857 0.00 0.00 41.82 2.44
679 716 2.231235 CCAAGTTGTACATGGCTTTCCC 59.769 50.000 0.00 0.00 29.63 3.97
680 717 2.231235 CCCAAGTTGTACATGGCTTTCC 59.769 50.000 8.27 0.00 35.74 3.13
681 718 2.890945 ACCCAAGTTGTACATGGCTTTC 59.109 45.455 8.27 0.00 35.74 2.62
682 719 2.957474 ACCCAAGTTGTACATGGCTTT 58.043 42.857 8.27 0.00 35.74 3.51
683 720 2.675658 ACCCAAGTTGTACATGGCTT 57.324 45.000 8.27 5.48 35.74 4.35
684 721 2.642807 AGTACCCAAGTTGTACATGGCT 59.357 45.455 8.27 0.00 40.79 4.75
685 722 3.007635 GAGTACCCAAGTTGTACATGGC 58.992 50.000 8.27 0.00 40.79 4.40
689 726 5.761234 GTCAATTGAGTACCCAAGTTGTACA 59.239 40.000 8.80 0.00 40.79 2.90
728 765 9.478768 TTTCTACGTGTAGATGTTGATTTTACA 57.521 29.630 10.34 0.00 41.37 2.41
770 807 5.164330 CGTATAAACAATGTTTGTGTGTGCG 60.164 40.000 20.40 6.97 44.59 5.34
780 817 4.585879 AGGGCTGACGTATAAACAATGTT 58.414 39.130 0.00 0.00 0.00 2.71
782 819 5.560966 AAAGGGCTGACGTATAAACAATG 57.439 39.130 0.00 0.00 0.00 2.82
784 821 6.646267 AGATAAAGGGCTGACGTATAAACAA 58.354 36.000 0.00 0.00 0.00 2.83
785 822 6.229936 AGATAAAGGGCTGACGTATAAACA 57.770 37.500 0.00 0.00 0.00 2.83
786 823 6.511282 GCAAGATAAAGGGCTGACGTATAAAC 60.511 42.308 0.00 0.00 0.00 2.01
787 824 5.526111 GCAAGATAAAGGGCTGACGTATAAA 59.474 40.000 0.00 0.00 0.00 1.40
788 825 5.054477 GCAAGATAAAGGGCTGACGTATAA 58.946 41.667 0.00 0.00 0.00 0.98
789 826 4.344102 AGCAAGATAAAGGGCTGACGTATA 59.656 41.667 0.00 0.00 34.83 1.47
790 827 3.134804 AGCAAGATAAAGGGCTGACGTAT 59.865 43.478 0.00 0.00 34.83 3.06
793 830 2.029838 AGCAAGATAAAGGGCTGACG 57.970 50.000 0.00 0.00 34.83 4.35
798 835 1.106285 CCACCAGCAAGATAAAGGGC 58.894 55.000 0.00 0.00 0.00 5.19
799 836 2.514458 ACCACCAGCAAGATAAAGGG 57.486 50.000 0.00 0.00 0.00 3.95
800 837 5.680619 TGTATACCACCAGCAAGATAAAGG 58.319 41.667 0.00 0.00 0.00 3.11
801 838 6.992123 TGATGTATACCACCAGCAAGATAAAG 59.008 38.462 0.00 0.00 0.00 1.85
874 1130 3.485463 AGTGGTTGTTGCTACTTGCTA 57.515 42.857 0.00 0.00 43.37 3.49
875 1131 2.348411 AGTGGTTGTTGCTACTTGCT 57.652 45.000 0.00 0.00 43.37 3.91
876 1132 2.618709 AGAAGTGGTTGTTGCTACTTGC 59.381 45.455 0.00 0.00 39.68 4.01
877 1133 4.130118 AGAGAAGTGGTTGTTGCTACTTG 58.870 43.478 0.00 0.00 39.68 3.16
878 1134 4.423625 AGAGAAGTGGTTGTTGCTACTT 57.576 40.909 0.00 0.00 41.74 2.24
879 1135 4.423625 AAGAGAAGTGGTTGTTGCTACT 57.576 40.909 0.00 0.00 0.00 2.57
880 1136 5.054477 TGTAAGAGAAGTGGTTGTTGCTAC 58.946 41.667 0.00 0.00 0.00 3.58
1032 1296 2.280628 GCAACGGAGGAACTAATGGAG 58.719 52.381 0.00 0.00 41.55 3.86
1117 1384 1.130054 TTGAGGCCAGAGCAGAAGGT 61.130 55.000 5.01 0.00 42.56 3.50
1147 1414 1.269413 GCATCAATGGCTGCATGTACC 60.269 52.381 0.50 0.00 38.28 3.34
1187 1461 2.143122 GCTAGCATGGTTTAGCGCATA 58.857 47.619 11.47 0.00 33.68 3.14
1191 1482 2.009774 ACAAGCTAGCATGGTTTAGCG 58.990 47.619 22.78 4.14 45.33 4.26
1197 1488 2.185004 AACGAACAAGCTAGCATGGT 57.815 45.000 22.78 17.69 0.00 3.55
1830 3548 1.425428 CTGCATCCGAACCGAAAGC 59.575 57.895 0.00 0.00 0.00 3.51
1834 3552 3.700970 TGGCTGCATCCGAACCGA 61.701 61.111 1.44 0.00 0.00 4.69
2266 4024 3.706373 CAGGTGTCCAGGGTCCCG 61.706 72.222 0.99 0.00 0.00 5.14
2374 4132 2.910360 CATCCCCCGAGCATGACA 59.090 61.111 0.00 0.00 0.00 3.58
2404 4162 3.999285 AGGTCCGAGGAGGTGGCT 61.999 66.667 0.00 0.00 41.99 4.75
2681 4719 2.108250 ACATTGAGCAACCCCTACAACT 59.892 45.455 0.00 0.00 0.00 3.16
2695 4733 4.122776 CGGAGGAAGGAACATACATTGAG 58.877 47.826 0.00 0.00 0.00 3.02
2736 4774 1.340991 CCGTCCCCAACTCAATCCAAT 60.341 52.381 0.00 0.00 0.00 3.16
2804 4843 0.045778 AGGGGGCACTGGTACCTTAT 59.954 55.000 14.36 0.00 0.00 1.73
2904 4943 4.579753 ACAAATTTTCCACATGGCCAAAAG 59.420 37.500 10.96 5.45 34.44 2.27
2945 4984 0.034059 CTCCGAAGTGCCTTGACTGT 59.966 55.000 0.00 0.00 0.00 3.55
3324 5363 7.709613 TCACTAATAATAAAGAACGAGGAAGCC 59.290 37.037 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.