Multiple sequence alignment - TraesCS7A01G050400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G050400 chr7A 100.000 4324 0 0 1 4324 23524432 23520109 0.000000e+00 7986.0
1 TraesCS7A01G050400 chr7A 96.154 2834 69 17 713 3537 23385926 23388728 0.000000e+00 4593.0
2 TraesCS7A01G050400 chr7A 84.810 2291 298 28 1099 3367 23354751 23357013 0.000000e+00 2257.0
3 TraesCS7A01G050400 chr7D 93.866 2853 114 27 713 3537 22943637 22946456 0.000000e+00 4242.0
4 TraesCS7A01G050400 chr7D 95.415 2552 96 11 999 3537 22974896 22972353 0.000000e+00 4045.0
5 TraesCS7A01G050400 chr7D 83.787 2461 307 54 1111 3531 22904421 22906829 0.000000e+00 2250.0
6 TraesCS7A01G050400 chr7D 83.482 224 10 11 726 941 22975098 22974894 2.660000e-42 183.0
7 TraesCS7A01G050400 chr7D 78.626 262 39 14 271 522 22975727 22975473 1.610000e-34 158.0
8 TraesCS7A01G050400 chr7D 91.954 87 2 2 711 797 22978244 22978163 2.730000e-22 117.0
9 TraesCS7A01G050400 chr7D 90.909 88 5 3 613 697 22975271 22975184 9.830000e-22 115.0
10 TraesCS7A01G050400 chrUn 93.968 2669 102 27 999 3637 89917648 89915009 0.000000e+00 3982.0
11 TraesCS7A01G050400 chrUn 93.968 2669 102 27 999 3637 89979660 89982299 0.000000e+00 3982.0
12 TraesCS7A01G050400 chrUn 83.807 352 29 16 3788 4115 89914845 89914498 4.200000e-80 309.0
13 TraesCS7A01G050400 chrUn 83.807 352 29 16 3785 4112 89982460 89982807 4.200000e-80 309.0
14 TraesCS7A01G050400 chrUn 91.781 146 11 1 4112 4256 89989831 89989976 7.330000e-48 202.0
15 TraesCS7A01G050400 chrUn 90.210 143 13 1 4115 4256 89903138 89902996 7.380000e-43 185.0
16 TraesCS7A01G050400 chrUn 83.482 224 10 11 726 941 89917850 89917646 2.660000e-42 183.0
17 TraesCS7A01G050400 chrUn 83.260 227 11 11 723 941 89979455 89979662 2.660000e-42 183.0
18 TraesCS7A01G050400 chrUn 79.151 259 40 12 271 522 89918476 89918225 2.670000e-37 167.0
19 TraesCS7A01G050400 chrUn 90.909 88 5 2 613 697 89918023 89917936 9.830000e-22 115.0
20 TraesCS7A01G050400 chrUn 90.909 88 5 2 613 697 89979285 89979372 9.830000e-22 115.0
21 TraesCS7A01G050400 chrUn 100.000 44 0 0 3713 3756 89914886 89914843 9.970000e-12 82.4
22 TraesCS7A01G050400 chrUn 100.000 44 0 0 3713 3756 89982422 89982465 9.970000e-12 82.4
23 TraesCS7A01G050400 chr4A 94.483 2574 123 11 974 3537 706838810 706836246 0.000000e+00 3949.0
24 TraesCS7A01G050400 chr4A 95.323 2138 84 8 975 3100 706706697 706708830 0.000000e+00 3380.0
25 TraesCS7A01G050400 chr4A 91.633 502 25 6 3113 3613 706708890 706709375 0.000000e+00 678.0
26 TraesCS7A01G050400 chr4A 82.746 284 22 13 660 939 706839080 706838820 1.210000e-55 228.0
27 TraesCS7A01G050400 chr4A 80.734 218 19 12 379 578 706705597 706705809 9.690000e-32 148.0
28 TraesCS7A01G050400 chr4A 96.154 52 2 0 888 939 706706649 706706700 7.700000e-13 86.1
29 TraesCS7A01G050400 chr5D 91.628 1744 112 21 887 2615 361184199 361182475 0.000000e+00 2381.0
30 TraesCS7A01G050400 chr2B 80.195 308 44 13 308 612 561571992 561571699 9.420000e-52 215.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G050400 chr7A 23520109 23524432 4323 True 7986.000 7986 100.000000 1 4324 1 chr7A.!!$R1 4323
1 TraesCS7A01G050400 chr7A 23385926 23388728 2802 False 4593.000 4593 96.154000 713 3537 1 chr7A.!!$F2 2824
2 TraesCS7A01G050400 chr7A 23354751 23357013 2262 False 2257.000 2257 84.810000 1099 3367 1 chr7A.!!$F1 2268
3 TraesCS7A01G050400 chr7D 22943637 22946456 2819 False 4242.000 4242 93.866000 713 3537 1 chr7D.!!$F2 2824
4 TraesCS7A01G050400 chr7D 22904421 22906829 2408 False 2250.000 2250 83.787000 1111 3531 1 chr7D.!!$F1 2420
5 TraesCS7A01G050400 chr7D 22972353 22978244 5891 True 923.600 4045 88.077200 271 3537 5 chr7D.!!$R1 3266
6 TraesCS7A01G050400 chrUn 89979285 89982807 3522 False 934.280 3982 90.388800 613 4112 5 chrUn.!!$F2 3499
7 TraesCS7A01G050400 chrUn 89914498 89918476 3978 True 806.400 3982 88.552833 271 4115 6 chrUn.!!$R2 3844
8 TraesCS7A01G050400 chr4A 706836246 706839080 2834 True 2088.500 3949 88.614500 660 3537 2 chr4A.!!$R1 2877
9 TraesCS7A01G050400 chr4A 706705597 706709375 3778 False 1073.025 3380 90.961000 379 3613 4 chr4A.!!$F1 3234
10 TraesCS7A01G050400 chr5D 361182475 361184199 1724 True 2381.000 2381 91.628000 887 2615 1 chr5D.!!$R1 1728

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
961 3816 0.106719 CGCTCCTCTCCTCTCCTCTT 60.107 60.0 0.00 0.00 0.00 2.85 F
2385 5275 0.798776 GTCCGCTTTGACATGTCTGG 59.201 55.0 25.55 17.97 35.29 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2818 5719 0.403271 ATCAGCAGAGTGCCCAACTT 59.597 50.0 0.00 0.00 46.52 2.66 R
3779 6842 0.034059 CGCTGGTCAGTTCTGAACCT 59.966 55.0 16.48 2.19 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 5.567138 AAAAGAAGTGAGGAAGTGTTGTG 57.433 39.130 0.00 0.00 0.00 3.33
41 42 1.261619 GAAGTGAGGAAGTGTTGTGCG 59.738 52.381 0.00 0.00 0.00 5.34
42 43 0.178068 AGTGAGGAAGTGTTGTGCGT 59.822 50.000 0.00 0.00 0.00 5.24
43 44 1.411246 AGTGAGGAAGTGTTGTGCGTA 59.589 47.619 0.00 0.00 0.00 4.42
44 45 2.037251 AGTGAGGAAGTGTTGTGCGTAT 59.963 45.455 0.00 0.00 0.00 3.06
45 46 3.257375 AGTGAGGAAGTGTTGTGCGTATA 59.743 43.478 0.00 0.00 0.00 1.47
46 47 4.081642 AGTGAGGAAGTGTTGTGCGTATAT 60.082 41.667 0.00 0.00 0.00 0.86
47 48 4.630069 GTGAGGAAGTGTTGTGCGTATATT 59.370 41.667 0.00 0.00 0.00 1.28
48 49 5.808540 GTGAGGAAGTGTTGTGCGTATATTA 59.191 40.000 0.00 0.00 0.00 0.98
49 50 5.808540 TGAGGAAGTGTTGTGCGTATATTAC 59.191 40.000 0.00 0.00 0.00 1.89
50 51 5.974108 AGGAAGTGTTGTGCGTATATTACT 58.026 37.500 0.00 0.00 0.00 2.24
51 52 6.403878 AGGAAGTGTTGTGCGTATATTACTT 58.596 36.000 0.00 0.00 0.00 2.24
52 53 6.534079 AGGAAGTGTTGTGCGTATATTACTTC 59.466 38.462 14.03 14.03 41.02 3.01
53 54 6.657836 AAGTGTTGTGCGTATATTACTTCC 57.342 37.500 0.00 0.00 0.00 3.46
54 55 5.974108 AGTGTTGTGCGTATATTACTTCCT 58.026 37.500 0.00 0.00 0.00 3.36
55 56 6.040878 AGTGTTGTGCGTATATTACTTCCTC 58.959 40.000 0.00 0.00 0.00 3.71
56 57 5.233689 GTGTTGTGCGTATATTACTTCCTCC 59.766 44.000 0.00 0.00 0.00 4.30
58 59 5.864418 TGTGCGTATATTACTTCCTCCTT 57.136 39.130 0.00 0.00 0.00 3.36
59 60 6.229936 TGTGCGTATATTACTTCCTCCTTT 57.770 37.500 0.00 0.00 0.00 3.11
60 61 6.278363 TGTGCGTATATTACTTCCTCCTTTC 58.722 40.000 0.00 0.00 0.00 2.62
61 62 5.695363 GTGCGTATATTACTTCCTCCTTTCC 59.305 44.000 0.00 0.00 0.00 3.13
63 64 6.126997 TGCGTATATTACTTCCTCCTTTCCAA 60.127 38.462 0.00 0.00 0.00 3.53
64 65 6.764560 GCGTATATTACTTCCTCCTTTCCAAA 59.235 38.462 0.00 0.00 0.00 3.28
66 67 9.338622 CGTATATTACTTCCTCCTTTCCAAATT 57.661 33.333 0.00 0.00 0.00 1.82
71 72 5.953571 ACTTCCTCCTTTCCAAATTACAGT 58.046 37.500 0.00 0.00 0.00 3.55
74 75 6.442541 TCCTCCTTTCCAAATTACAGTGTA 57.557 37.500 0.00 0.00 0.00 2.90
75 76 7.027874 TCCTCCTTTCCAAATTACAGTGTAT 57.972 36.000 3.28 0.00 0.00 2.29
77 78 6.884295 CCTCCTTTCCAAATTACAGTGTATGA 59.116 38.462 3.28 0.00 0.00 2.15
80 81 9.308000 TCCTTTCCAAATTACAGTGTATGATTT 57.692 29.630 3.28 5.55 0.00 2.17
81 82 9.927668 CCTTTCCAAATTACAGTGTATGATTTT 57.072 29.630 3.28 0.32 0.00 1.82
95 96 9.846248 AGTGTATGATTTTTCAGAAATGTTAGC 57.154 29.630 0.00 0.00 0.00 3.09
96 97 9.846248 GTGTATGATTTTTCAGAAATGTTAGCT 57.154 29.630 0.00 0.00 0.00 3.32
97 98 9.844790 TGTATGATTTTTCAGAAATGTTAGCTG 57.155 29.630 0.00 0.00 0.00 4.24
98 99 9.294030 GTATGATTTTTCAGAAATGTTAGCTGG 57.706 33.333 0.00 0.00 0.00 4.85
99 100 7.523293 TGATTTTTCAGAAATGTTAGCTGGA 57.477 32.000 0.00 0.00 0.00 3.86
100 101 7.596494 TGATTTTTCAGAAATGTTAGCTGGAG 58.404 34.615 0.00 0.00 0.00 3.86
101 102 7.448161 TGATTTTTCAGAAATGTTAGCTGGAGA 59.552 33.333 0.00 0.00 0.00 3.71
102 103 6.560253 TTTTCAGAAATGTTAGCTGGAGAC 57.440 37.500 0.00 0.00 0.00 3.36
103 104 4.207891 TCAGAAATGTTAGCTGGAGACC 57.792 45.455 0.00 0.00 0.00 3.85
106 107 2.674796 AATGTTAGCTGGAGACCGTC 57.325 50.000 0.00 0.00 0.00 4.79
112 113 2.575993 CTGGAGACCGTCAGCCAG 59.424 66.667 19.82 19.82 41.62 4.85
114 115 2.680352 GGAGACCGTCAGCCAGGA 60.680 66.667 0.40 0.00 0.00 3.86
115 116 2.283529 GGAGACCGTCAGCCAGGAA 61.284 63.158 0.40 0.00 0.00 3.36
117 118 2.435059 GACCGTCAGCCAGGAAGC 60.435 66.667 0.00 0.00 0.00 3.86
118 119 3.959991 GACCGTCAGCCAGGAAGCC 62.960 68.421 0.00 0.00 0.00 4.35
119 120 4.020617 CCGTCAGCCAGGAAGCCA 62.021 66.667 0.00 0.00 0.00 4.75
120 121 2.032528 CGTCAGCCAGGAAGCCAA 59.967 61.111 0.00 0.00 0.00 4.52
121 122 2.328099 CGTCAGCCAGGAAGCCAAC 61.328 63.158 0.00 0.00 0.00 3.77
122 123 1.073897 GTCAGCCAGGAAGCCAACT 59.926 57.895 0.00 0.00 0.00 3.16
123 124 0.957888 GTCAGCCAGGAAGCCAACTC 60.958 60.000 0.00 0.00 0.00 3.01
124 125 1.676967 CAGCCAGGAAGCCAACTCC 60.677 63.158 0.00 0.00 0.00 3.85
125 126 2.156098 AGCCAGGAAGCCAACTCCA 61.156 57.895 0.00 0.00 0.00 3.86
126 127 1.228552 GCCAGGAAGCCAACTCCAA 60.229 57.895 0.00 0.00 0.00 3.53
127 128 1.527433 GCCAGGAAGCCAACTCCAAC 61.527 60.000 0.00 0.00 0.00 3.77
129 130 0.250295 CAGGAAGCCAACTCCAACGA 60.250 55.000 0.00 0.00 0.00 3.85
130 131 0.250338 AGGAAGCCAACTCCAACGAC 60.250 55.000 0.00 0.00 0.00 4.34
132 133 1.228154 AAGCCAACTCCAACGACCC 60.228 57.895 0.00 0.00 0.00 4.46
133 134 2.671963 GCCAACTCCAACGACCCC 60.672 66.667 0.00 0.00 0.00 4.95
134 135 3.157680 CCAACTCCAACGACCCCT 58.842 61.111 0.00 0.00 0.00 4.79
135 136 1.454539 CCAACTCCAACGACCCCTT 59.545 57.895 0.00 0.00 0.00 3.95
136 137 0.179001 CCAACTCCAACGACCCCTTT 60.179 55.000 0.00 0.00 0.00 3.11
137 138 1.687563 CAACTCCAACGACCCCTTTT 58.312 50.000 0.00 0.00 0.00 2.27
138 139 1.607148 CAACTCCAACGACCCCTTTTC 59.393 52.381 0.00 0.00 0.00 2.29
139 140 0.109913 ACTCCAACGACCCCTTTTCC 59.890 55.000 0.00 0.00 0.00 3.13
141 142 0.109723 TCCAACGACCCCTTTTCCTG 59.890 55.000 0.00 0.00 0.00 3.86
142 143 1.524008 CCAACGACCCCTTTTCCTGC 61.524 60.000 0.00 0.00 0.00 4.85
143 144 1.228459 AACGACCCCTTTTCCTGCC 60.228 57.895 0.00 0.00 0.00 4.85
144 145 2.746277 CGACCCCTTTTCCTGCCG 60.746 66.667 0.00 0.00 0.00 5.69
145 146 2.434774 GACCCCTTTTCCTGCCGT 59.565 61.111 0.00 0.00 0.00 5.68
146 147 1.681076 GACCCCTTTTCCTGCCGTA 59.319 57.895 0.00 0.00 0.00 4.02
148 149 1.743995 CCCCTTTTCCTGCCGTACG 60.744 63.158 8.69 8.69 0.00 3.67
150 151 1.017701 CCCTTTTCCTGCCGTACGAC 61.018 60.000 18.76 5.50 0.00 4.34
152 153 1.952266 CTTTTCCTGCCGTACGACGC 61.952 60.000 18.76 13.34 40.91 5.19
153 154 4.764336 TTCCTGCCGTACGACGCG 62.764 66.667 18.76 3.53 40.91 6.01
171 172 1.887707 GCCGCGGTGCTAGCTTTAT 60.888 57.895 28.70 0.00 0.00 1.40
172 173 1.832411 GCCGCGGTGCTAGCTTTATC 61.832 60.000 28.70 0.08 0.00 1.75
173 174 0.249489 CCGCGGTGCTAGCTTTATCT 60.249 55.000 19.50 0.00 0.00 1.98
174 175 0.855349 CGCGGTGCTAGCTTTATCTG 59.145 55.000 17.23 7.44 0.00 2.90
176 177 2.280628 GCGGTGCTAGCTTTATCTGTT 58.719 47.619 17.23 0.00 0.00 3.16
178 179 4.058817 GCGGTGCTAGCTTTATCTGTTAT 58.941 43.478 17.23 0.00 0.00 1.89
180 181 5.007724 GCGGTGCTAGCTTTATCTGTTATTT 59.992 40.000 17.23 0.00 0.00 1.40
181 182 6.458342 GCGGTGCTAGCTTTATCTGTTATTTT 60.458 38.462 17.23 0.00 0.00 1.82
182 183 6.907212 CGGTGCTAGCTTTATCTGTTATTTTG 59.093 38.462 17.23 0.00 0.00 2.44
185 186 9.495754 GTGCTAGCTTTATCTGTTATTTTGAAG 57.504 33.333 17.23 0.00 0.00 3.02
218 219 9.760660 TTGTTTATTTTCGTTTTTCCATTGTTG 57.239 25.926 0.00 0.00 0.00 3.33
219 220 9.151471 TGTTTATTTTCGTTTTTCCATTGTTGA 57.849 25.926 0.00 0.00 0.00 3.18
220 221 9.974750 GTTTATTTTCGTTTTTCCATTGTTGAA 57.025 25.926 0.00 0.00 0.00 2.69
222 223 9.974750 TTATTTTCGTTTTTCCATTGTTGAAAC 57.025 25.926 0.00 0.00 31.78 2.78
223 224 6.410243 TTTCGTTTTTCCATTGTTGAAACC 57.590 33.333 0.00 0.00 31.78 3.27
224 225 5.073311 TCGTTTTTCCATTGTTGAAACCA 57.927 34.783 0.00 0.00 31.78 3.67
226 227 5.932303 TCGTTTTTCCATTGTTGAAACCAAA 59.068 32.000 0.00 0.00 31.78 3.28
227 228 6.426937 TCGTTTTTCCATTGTTGAAACCAAAA 59.573 30.769 0.00 0.00 31.78 2.44
228 229 7.041372 TCGTTTTTCCATTGTTGAAACCAAAAA 60.041 29.630 0.00 0.00 31.78 1.94
229 230 7.752686 CGTTTTTCCATTGTTGAAACCAAAAAT 59.247 29.630 0.00 0.00 33.03 1.82
231 232 9.631452 TTTTTCCATTGTTGAAACCAAAAATTC 57.369 25.926 0.00 0.00 31.00 2.17
232 233 6.934048 TCCATTGTTGAAACCAAAAATTCC 57.066 33.333 0.00 0.00 31.00 3.01
233 234 5.825151 TCCATTGTTGAAACCAAAAATTCCC 59.175 36.000 0.00 0.00 31.00 3.97
234 235 5.277731 CCATTGTTGAAACCAAAAATTCCCG 60.278 40.000 0.00 0.00 31.00 5.14
235 236 4.737855 TGTTGAAACCAAAAATTCCCGA 57.262 36.364 0.00 0.00 0.00 5.14
236 237 5.086104 TGTTGAAACCAAAAATTCCCGAA 57.914 34.783 0.00 0.00 0.00 4.30
238 239 6.116126 TGTTGAAACCAAAAATTCCCGAATT 58.884 32.000 0.00 0.00 42.35 2.17
272 273 5.923733 TTTTTACCCTCACATGTGTGTTT 57.076 34.783 24.63 13.31 45.76 2.83
273 274 5.923733 TTTTACCCTCACATGTGTGTTTT 57.076 34.783 24.63 11.07 45.76 2.43
274 275 5.923733 TTTACCCTCACATGTGTGTTTTT 57.076 34.783 24.63 8.79 45.76 1.94
338 2426 5.670792 TTTTCTTACTTAGAGGATGGCGA 57.329 39.130 0.00 0.00 33.51 5.54
358 2446 7.140705 TGGCGATTTTATTATCAAGAGCATTG 58.859 34.615 0.00 0.00 0.00 2.82
401 2652 9.897744 AACATGGCATATTTTATAAAGACGATG 57.102 29.630 0.00 3.04 0.00 3.84
492 2759 8.652810 ATTGCATTTTTAGTATTGGAAGATGC 57.347 30.769 0.00 0.00 38.20 3.91
497 2764 9.603921 CATTTTTAGTATTGGAAGATGCCATTT 57.396 29.630 0.00 0.00 37.86 2.32
498 2765 9.822185 ATTTTTAGTATTGGAAGATGCCATTTC 57.178 29.630 0.00 0.00 37.86 2.17
508 2775 6.891361 TGGAAGATGCCATTTCTTTATGAAGA 59.109 34.615 0.00 0.00 35.03 2.87
549 2817 7.101054 GGCCATGCATGATTTTTATATGATGT 58.899 34.615 28.31 0.00 0.00 3.06
642 3255 9.581289 TTTGTCATTTCTTCCCTTTTCTATGTA 57.419 29.630 0.00 0.00 0.00 2.29
684 3298 1.062488 AAGACCTGACTTGGGCTGGT 61.062 55.000 1.57 1.57 46.66 4.00
781 3456 2.701163 GATCGATGCGGAGGTGTCCC 62.701 65.000 0.54 0.00 40.20 4.46
782 3457 3.461773 CGATGCGGAGGTGTCCCT 61.462 66.667 0.00 0.00 46.66 4.20
809 3484 2.094182 TCGGGTTAGTGCTTGATCTGAC 60.094 50.000 0.00 0.00 0.00 3.51
851 3532 1.606668 ACTACTCTATCAGCTGCGCTC 59.393 52.381 9.47 0.00 36.40 5.03
860 3541 1.006805 AGCTGCGCTCGATGGATAC 60.007 57.895 9.73 0.00 30.62 2.24
879 3562 6.785466 TGGATACATATATGTGTGTACCCACT 59.215 38.462 25.48 0.00 39.81 4.00
939 3794 2.159599 GGCGTTGCAGAGAAATCAGAAG 60.160 50.000 0.00 0.00 0.00 2.85
940 3795 2.738846 GCGTTGCAGAGAAATCAGAAGA 59.261 45.455 0.00 0.00 0.00 2.87
941 3796 3.424170 GCGTTGCAGAGAAATCAGAAGAC 60.424 47.826 0.00 0.00 0.00 3.01
942 3797 3.124297 CGTTGCAGAGAAATCAGAAGACC 59.876 47.826 0.00 0.00 0.00 3.85
943 3798 2.964740 TGCAGAGAAATCAGAAGACCG 58.035 47.619 0.00 0.00 0.00 4.79
944 3799 1.663135 GCAGAGAAATCAGAAGACCGC 59.337 52.381 0.00 0.00 0.00 5.68
945 3800 2.676463 GCAGAGAAATCAGAAGACCGCT 60.676 50.000 0.00 0.00 0.00 5.52
946 3801 3.186119 CAGAGAAATCAGAAGACCGCTC 58.814 50.000 0.00 0.00 0.00 5.03
947 3802 2.167487 AGAGAAATCAGAAGACCGCTCC 59.833 50.000 0.00 0.00 0.00 4.70
948 3803 2.167487 GAGAAATCAGAAGACCGCTCCT 59.833 50.000 0.00 0.00 0.00 3.69
949 3804 2.167487 AGAAATCAGAAGACCGCTCCTC 59.833 50.000 0.00 0.00 0.00 3.71
950 3805 1.859302 AATCAGAAGACCGCTCCTCT 58.141 50.000 0.00 0.00 0.00 3.69
951 3806 1.398692 ATCAGAAGACCGCTCCTCTC 58.601 55.000 0.00 0.00 0.00 3.20
952 3807 0.681564 TCAGAAGACCGCTCCTCTCC 60.682 60.000 0.00 0.00 0.00 3.71
953 3808 0.682855 CAGAAGACCGCTCCTCTCCT 60.683 60.000 0.00 0.00 0.00 3.69
954 3809 0.395173 AGAAGACCGCTCCTCTCCTC 60.395 60.000 0.00 0.00 0.00 3.71
955 3810 0.395173 GAAGACCGCTCCTCTCCTCT 60.395 60.000 0.00 0.00 0.00 3.69
956 3811 0.395173 AAGACCGCTCCTCTCCTCTC 60.395 60.000 0.00 0.00 0.00 3.20
957 3812 1.826487 GACCGCTCCTCTCCTCTCC 60.826 68.421 0.00 0.00 0.00 3.71
958 3813 2.279037 GACCGCTCCTCTCCTCTCCT 62.279 65.000 0.00 0.00 0.00 3.69
959 3814 1.528309 CCGCTCCTCTCCTCTCCTC 60.528 68.421 0.00 0.00 0.00 3.71
960 3815 1.531748 CGCTCCTCTCCTCTCCTCT 59.468 63.158 0.00 0.00 0.00 3.69
961 3816 0.106719 CGCTCCTCTCCTCTCCTCTT 60.107 60.000 0.00 0.00 0.00 2.85
962 3817 1.402787 GCTCCTCTCCTCTCCTCTTG 58.597 60.000 0.00 0.00 0.00 3.02
963 3818 1.341976 GCTCCTCTCCTCTCCTCTTGT 60.342 57.143 0.00 0.00 0.00 3.16
964 3819 2.888069 GCTCCTCTCCTCTCCTCTTGTT 60.888 54.545 0.00 0.00 0.00 2.83
965 3820 3.440127 CTCCTCTCCTCTCCTCTTGTTT 58.560 50.000 0.00 0.00 0.00 2.83
966 3821 3.169099 TCCTCTCCTCTCCTCTTGTTTG 58.831 50.000 0.00 0.00 0.00 2.93
967 3822 2.235898 CCTCTCCTCTCCTCTTGTTTGG 59.764 54.545 0.00 0.00 0.00 3.28
968 3823 3.169099 CTCTCCTCTCCTCTTGTTTGGA 58.831 50.000 0.00 0.00 0.00 3.53
969 3824 3.774216 CTCTCCTCTCCTCTTGTTTGGAT 59.226 47.826 0.00 0.00 0.00 3.41
970 3825 3.772025 TCTCCTCTCCTCTTGTTTGGATC 59.228 47.826 0.00 0.00 0.00 3.36
971 3826 2.497675 TCCTCTCCTCTTGTTTGGATCG 59.502 50.000 0.00 0.00 0.00 3.69
972 3827 2.497675 CCTCTCCTCTTGTTTGGATCGA 59.502 50.000 0.00 0.00 0.00 3.59
1440 4301 1.948145 GGCAAGCTCATCCTCTTCATG 59.052 52.381 0.00 0.00 0.00 3.07
1443 4304 3.748027 GCAAGCTCATCCTCTTCATGGAT 60.748 47.826 0.00 0.00 44.44 3.41
1813 4686 9.857957 TTGTAGGTTTACTTTTGTAGGTTTTTG 57.142 29.630 0.00 0.00 36.14 2.44
1814 4687 7.975058 TGTAGGTTTACTTTTGTAGGTTTTTGC 59.025 33.333 0.00 0.00 36.14 3.68
1815 4688 6.937392 AGGTTTACTTTTGTAGGTTTTTGCA 58.063 32.000 0.00 0.00 36.14 4.08
2058 4942 9.793259 TCTTTATGAGTAGTCTCCATTTGTTTT 57.207 29.630 0.00 0.00 39.75 2.43
2385 5275 0.798776 GTCCGCTTTGACATGTCTGG 59.201 55.000 25.55 17.97 35.29 3.86
2472 5370 6.024552 TCTTTGCACATGTATTTCTTTCCC 57.975 37.500 0.00 0.00 0.00 3.97
2744 5644 2.268920 GTCAGCTGGAATGGCCGA 59.731 61.111 15.13 0.00 40.66 5.54
2799 5699 5.110814 TGGAAAAGGTATGTGTATCCCAG 57.889 43.478 0.00 0.00 0.00 4.45
2806 5706 3.704566 GGTATGTGTATCCCAGACTGTCA 59.295 47.826 10.88 0.00 0.00 3.58
2840 5741 1.830587 TTGGGCACTCTGCTGATCGT 61.831 55.000 0.00 0.00 44.28 3.73
3209 6174 7.713073 CCTATTAAGAGGTGGATGAAGAAGAAC 59.287 40.741 8.05 0.00 0.00 3.01
3451 6448 8.160342 CACTTGTTGTTCGTACTGTATATTCAC 58.840 37.037 0.00 0.00 0.00 3.18
3469 6466 5.818136 TTCACTATCTGTAGCAAAATGGC 57.182 39.130 0.00 0.00 0.00 4.40
3470 6467 4.199310 TCACTATCTGTAGCAAAATGGCC 58.801 43.478 0.00 0.00 0.00 5.36
3537 6545 7.648112 TGAGATTTATACTTCCTTGATCGAACG 59.352 37.037 0.00 0.00 0.00 3.95
3538 6546 7.713750 AGATTTATACTTCCTTGATCGAACGA 58.286 34.615 0.00 0.00 0.00 3.85
3548 6556 0.739462 GATCGAACGATGTGCCCACA 60.739 55.000 14.33 3.29 46.44 4.17
3562 6570 2.642311 TGCCCACAGATGAAAACCTCTA 59.358 45.455 0.00 0.00 0.00 2.43
3625 6641 1.078567 CCCTGGCTTGAGCTGACTC 60.079 63.158 0.00 0.00 43.76 3.36
3627 6643 0.391395 CCTGGCTTGAGCTGACTCTG 60.391 60.000 0.00 0.00 43.85 3.35
3628 6644 0.321021 CTGGCTTGAGCTGACTCTGT 59.679 55.000 0.00 0.00 43.85 3.41
3629 6645 0.319728 TGGCTTGAGCTGACTCTGTC 59.680 55.000 0.00 0.00 43.85 3.51
3630 6646 0.319728 GGCTTGAGCTGACTCTGTCA 59.680 55.000 0.00 0.37 43.85 3.58
3642 6675 3.084786 GACTCTGTCATTTTCCCCCAAG 58.915 50.000 0.00 0.00 32.09 3.61
3643 6676 1.821136 CTCTGTCATTTTCCCCCAAGC 59.179 52.381 0.00 0.00 0.00 4.01
3645 6678 2.181975 CTGTCATTTTCCCCCAAGCAT 58.818 47.619 0.00 0.00 0.00 3.79
3647 6680 0.903942 TCATTTTCCCCCAAGCATGC 59.096 50.000 10.51 10.51 0.00 4.06
3649 6682 1.210967 CATTTTCCCCCAAGCATGCAT 59.789 47.619 21.98 4.57 0.00 3.96
3650 6683 0.903942 TTTTCCCCCAAGCATGCATC 59.096 50.000 21.98 0.00 0.00 3.91
3651 6684 0.977108 TTTCCCCCAAGCATGCATCC 60.977 55.000 21.98 0.00 0.00 3.51
3652 6685 2.841044 CCCCCAAGCATGCATCCC 60.841 66.667 21.98 0.00 0.00 3.85
3653 6686 2.042741 CCCCAAGCATGCATCCCA 60.043 61.111 21.98 0.00 0.00 4.37
3654 6687 2.428925 CCCCAAGCATGCATCCCAC 61.429 63.158 21.98 0.00 0.00 4.61
3664 6702 0.107410 TGCATCCCACACGTATTCCC 60.107 55.000 0.00 0.00 0.00 3.97
3665 6703 1.157870 GCATCCCACACGTATTCCCG 61.158 60.000 0.00 0.00 0.00 5.14
3671 6709 1.337447 CCACACGTATTCCCGTTGACT 60.337 52.381 0.00 0.00 39.45 3.41
3672 6710 1.990563 CACACGTATTCCCGTTGACTC 59.009 52.381 0.00 0.00 39.45 3.36
3753 6816 5.436175 TGAGTCTTGACACTTGAATCCAAA 58.564 37.500 3.49 0.00 0.00 3.28
3754 6817 5.885352 TGAGTCTTGACACTTGAATCCAAAA 59.115 36.000 3.49 0.00 0.00 2.44
3755 6818 6.136541 AGTCTTGACACTTGAATCCAAAAC 57.863 37.500 3.49 0.00 0.00 2.43
3756 6819 5.067805 AGTCTTGACACTTGAATCCAAAACC 59.932 40.000 3.49 0.00 0.00 3.27
3757 6820 4.340950 TCTTGACACTTGAATCCAAAACCC 59.659 41.667 0.00 0.00 0.00 4.11
3758 6821 2.962421 TGACACTTGAATCCAAAACCCC 59.038 45.455 0.00 0.00 0.00 4.95
3759 6822 1.960689 ACACTTGAATCCAAAACCCCG 59.039 47.619 0.00 0.00 0.00 5.73
3760 6823 0.966179 ACTTGAATCCAAAACCCCGC 59.034 50.000 0.00 0.00 0.00 6.13
3761 6824 0.246360 CTTGAATCCAAAACCCCGCC 59.754 55.000 0.00 0.00 0.00 6.13
3762 6825 1.188871 TTGAATCCAAAACCCCGCCC 61.189 55.000 0.00 0.00 0.00 6.13
3763 6826 1.304962 GAATCCAAAACCCCGCCCT 60.305 57.895 0.00 0.00 0.00 5.19
3764 6827 0.902984 GAATCCAAAACCCCGCCCTT 60.903 55.000 0.00 0.00 0.00 3.95
3765 6828 0.902984 AATCCAAAACCCCGCCCTTC 60.903 55.000 0.00 0.00 0.00 3.46
3766 6829 1.800229 ATCCAAAACCCCGCCCTTCT 61.800 55.000 0.00 0.00 0.00 2.85
3767 6830 1.977009 CCAAAACCCCGCCCTTCTC 60.977 63.158 0.00 0.00 0.00 2.87
3768 6831 1.074951 CAAAACCCCGCCCTTCTCT 59.925 57.895 0.00 0.00 0.00 3.10
3769 6832 0.960861 CAAAACCCCGCCCTTCTCTC 60.961 60.000 0.00 0.00 0.00 3.20
3770 6833 1.134438 AAAACCCCGCCCTTCTCTCT 61.134 55.000 0.00 0.00 0.00 3.10
3771 6834 1.842381 AAACCCCGCCCTTCTCTCTG 61.842 60.000 0.00 0.00 0.00 3.35
3772 6835 3.474570 CCCCGCCCTTCTCTCTGG 61.475 72.222 0.00 0.00 0.00 3.86
3773 6836 4.168291 CCCGCCCTTCTCTCTGGC 62.168 72.222 0.00 0.00 41.85 4.85
3776 6839 4.168291 GCCCTTCTCTCTGGCGGG 62.168 72.222 0.00 0.00 35.08 6.13
3777 6840 3.474570 CCCTTCTCTCTGGCGGGG 61.475 72.222 0.00 0.00 0.00 5.73
3778 6841 3.474570 CCTTCTCTCTGGCGGGGG 61.475 72.222 0.00 0.00 0.00 5.40
3779 6842 2.364317 CTTCTCTCTGGCGGGGGA 60.364 66.667 0.00 0.00 0.00 4.81
3780 6843 2.364317 TTCTCTCTGGCGGGGGAG 60.364 66.667 9.78 9.78 0.00 4.30
3781 6844 3.984186 TTCTCTCTGGCGGGGGAGG 62.984 68.421 14.07 0.00 0.00 4.30
3782 6845 4.787280 CTCTCTGGCGGGGGAGGT 62.787 72.222 0.00 0.00 0.00 3.85
3783 6846 4.332543 TCTCTGGCGGGGGAGGTT 62.333 66.667 0.00 0.00 0.00 3.50
3784 6847 3.787001 CTCTGGCGGGGGAGGTTC 61.787 72.222 0.00 0.00 0.00 3.62
3785 6848 4.649705 TCTGGCGGGGGAGGTTCA 62.650 66.667 0.00 0.00 0.00 3.18
3786 6849 4.101448 CTGGCGGGGGAGGTTCAG 62.101 72.222 0.00 0.00 0.00 3.02
3809 6872 3.651480 GACCAGCGCGTGCACATTC 62.651 63.158 24.79 9.77 46.23 2.67
3810 6873 3.725459 CCAGCGCGTGCACATTCA 61.725 61.111 24.79 0.00 46.23 2.57
3811 6874 2.481919 CAGCGCGTGCACATTCAT 59.518 55.556 24.79 0.00 46.23 2.57
3822 6885 1.170442 CACATTCATGTCTGGCTGCA 58.830 50.000 0.50 0.00 39.39 4.41
3823 6886 1.132453 CACATTCATGTCTGGCTGCAG 59.868 52.381 10.11 10.11 39.39 4.41
3828 6891 3.933048 ATGTCTGGCTGCAGGCACC 62.933 63.158 36.53 28.14 46.12 5.01
3829 6892 4.648626 GTCTGGCTGCAGGCACCA 62.649 66.667 36.53 23.65 46.12 4.17
3842 6907 3.065306 CACCAGTACCCGCCTTGA 58.935 61.111 0.00 0.00 0.00 3.02
3859 6924 2.471815 TGATCCCCCACTATCTCGTT 57.528 50.000 0.00 0.00 0.00 3.85
3862 6927 0.539986 TCCCCCACTATCTCGTTTGC 59.460 55.000 0.00 0.00 0.00 3.68
3863 6928 0.463833 CCCCCACTATCTCGTTTGCC 60.464 60.000 0.00 0.00 0.00 4.52
3866 6937 0.108329 CCACTATCTCGTTTGCCCGT 60.108 55.000 0.00 0.00 0.00 5.28
3870 6941 0.390603 TATCTCGTTTGCCCGTGTGG 60.391 55.000 0.00 0.00 37.09 4.17
3911 6995 3.199946 TCTCCCTGTGTCAAACAACTCTT 59.800 43.478 0.00 0.00 38.67 2.85
3918 7002 4.881273 TGTGTCAAACAACTCTTGCTGTAT 59.119 37.500 0.00 0.00 35.24 2.29
3920 7004 6.710295 TGTGTCAAACAACTCTTGCTGTATAT 59.290 34.615 0.00 0.00 35.24 0.86
3935 7019 4.357325 CTGTATATCTGGGGTCTGGCTAT 58.643 47.826 0.00 0.00 0.00 2.97
3937 7021 6.105122 TGTATATCTGGGGTCTGGCTATAT 57.895 41.667 0.00 0.00 0.00 0.86
3938 7022 5.899547 TGTATATCTGGGGTCTGGCTATATG 59.100 44.000 0.00 0.00 0.00 1.78
3939 7023 1.352083 TCTGGGGTCTGGCTATATGC 58.648 55.000 0.00 0.00 41.94 3.14
3978 7063 0.680061 ATTCCTACCGCCTCCGATTC 59.320 55.000 0.00 0.00 36.29 2.52
3979 7064 1.397390 TTCCTACCGCCTCCGATTCC 61.397 60.000 0.00 0.00 36.29 3.01
4001 7086 3.119029 CCAAATGGGACTGGCTAAATGTG 60.119 47.826 0.00 0.00 40.01 3.21
4006 7091 2.290960 GGGACTGGCTAAATGTGAGGTT 60.291 50.000 0.00 0.00 0.00 3.50
4031 7116 2.741759 AAATGCAATTTGGGTCGGTC 57.258 45.000 0.00 0.00 46.55 4.79
4032 7117 0.525761 AATGCAATTTGGGTCGGTCG 59.474 50.000 0.00 0.00 26.74 4.79
4037 7122 1.463444 CAATTTGGGTCGGTCGAACTC 59.537 52.381 8.35 0.00 31.39 3.01
4038 7123 0.974383 ATTTGGGTCGGTCGAACTCT 59.026 50.000 8.35 0.00 31.39 3.24
4062 7147 1.739466 GAGCCGTCAAATGCAAGATGA 59.261 47.619 0.00 0.00 0.00 2.92
4094 7181 2.095212 GCATCTTGAACCTCCGAAAACC 60.095 50.000 0.00 0.00 0.00 3.27
4095 7182 1.873698 TCTTGAACCTCCGAAAACCG 58.126 50.000 0.00 0.00 38.18 4.44
4100 7187 2.148768 GAACCTCCGAAAACCGTTCAT 58.851 47.619 0.00 0.00 34.36 2.57
4101 7188 2.265589 ACCTCCGAAAACCGTTCATT 57.734 45.000 0.00 0.00 36.31 2.57
4103 7190 3.946606 ACCTCCGAAAACCGTTCATTAT 58.053 40.909 0.00 0.00 36.31 1.28
4112 7199 7.414098 CCGAAAACCGTTCATTATTCATCTTCT 60.414 37.037 0.00 0.00 36.31 2.85
4117 7204 9.613428 AACCGTTCATTATTCATCTTCTATTGA 57.387 29.630 0.00 0.00 0.00 2.57
4118 7205 9.265901 ACCGTTCATTATTCATCTTCTATTGAG 57.734 33.333 0.00 0.00 0.00 3.02
4119 7206 8.715998 CCGTTCATTATTCATCTTCTATTGAGG 58.284 37.037 0.00 0.00 0.00 3.86
4120 7207 9.265901 CGTTCATTATTCATCTTCTATTGAGGT 57.734 33.333 0.00 0.00 0.00 3.85
4122 7209 9.481340 TTCATTATTCATCTTCTATTGAGGTCG 57.519 33.333 0.00 0.00 0.00 4.79
4123 7210 8.860088 TCATTATTCATCTTCTATTGAGGTCGA 58.140 33.333 0.00 0.00 0.00 4.20
4124 7211 9.650539 CATTATTCATCTTCTATTGAGGTCGAT 57.349 33.333 0.00 0.00 0.00 3.59
4125 7212 9.868277 ATTATTCATCTTCTATTGAGGTCGATC 57.132 33.333 0.00 0.00 0.00 3.69
4126 7213 5.363979 TCATCTTCTATTGAGGTCGATCG 57.636 43.478 9.36 9.36 0.00 3.69
4127 7214 4.822350 TCATCTTCTATTGAGGTCGATCGT 59.178 41.667 15.94 0.00 0.00 3.73
4128 7215 5.995897 TCATCTTCTATTGAGGTCGATCGTA 59.004 40.000 15.94 0.00 0.00 3.43
4129 7216 6.655425 TCATCTTCTATTGAGGTCGATCGTAT 59.345 38.462 15.94 1.87 0.00 3.06
4130 7217 6.879276 TCTTCTATTGAGGTCGATCGTATT 57.121 37.500 15.94 1.17 0.00 1.89
4131 7218 7.273320 TCTTCTATTGAGGTCGATCGTATTT 57.727 36.000 15.94 0.00 0.00 1.40
4132 7219 7.361127 TCTTCTATTGAGGTCGATCGTATTTC 58.639 38.462 15.94 9.44 0.00 2.17
4133 7220 6.879276 TCTATTGAGGTCGATCGTATTTCT 57.121 37.500 15.94 6.58 0.00 2.52
4134 7221 7.974482 TCTATTGAGGTCGATCGTATTTCTA 57.026 36.000 15.94 6.63 0.00 2.10
4135 7222 8.563123 TCTATTGAGGTCGATCGTATTTCTAT 57.437 34.615 15.94 12.56 0.00 1.98
4136 7223 9.662947 TCTATTGAGGTCGATCGTATTTCTATA 57.337 33.333 15.94 12.95 0.00 1.31
4161 7248 6.837471 ATATCTAGGGTCCGACATACTTTC 57.163 41.667 0.00 0.00 0.00 2.62
4162 7249 4.246712 TCTAGGGTCCGACATACTTTCT 57.753 45.455 0.00 0.00 0.00 2.52
4163 7250 3.952323 TCTAGGGTCCGACATACTTTCTG 59.048 47.826 0.00 0.00 0.00 3.02
4164 7251 1.831736 AGGGTCCGACATACTTTCTGG 59.168 52.381 0.00 0.00 0.00 3.86
4165 7252 1.829222 GGGTCCGACATACTTTCTGGA 59.171 52.381 0.00 0.00 0.00 3.86
4166 7253 2.418334 GGGTCCGACATACTTTCTGGAC 60.418 54.545 0.00 0.63 43.98 4.02
4167 7254 2.232941 GGTCCGACATACTTTCTGGACA 59.767 50.000 10.94 0.00 45.97 4.02
4168 7255 3.251571 GTCCGACATACTTTCTGGACAC 58.748 50.000 4.42 0.00 44.10 3.67
4169 7256 2.094906 TCCGACATACTTTCTGGACACG 60.095 50.000 0.00 0.00 0.00 4.49
4170 7257 2.352421 CCGACATACTTTCTGGACACGT 60.352 50.000 0.00 0.00 0.00 4.49
4171 7258 2.915463 CGACATACTTTCTGGACACGTC 59.085 50.000 0.00 0.00 0.00 4.34
4172 7259 3.366070 CGACATACTTTCTGGACACGTCT 60.366 47.826 0.00 0.00 0.00 4.18
4173 7260 3.914312 ACATACTTTCTGGACACGTCTG 58.086 45.455 0.00 0.00 0.00 3.51
4174 7261 3.321111 ACATACTTTCTGGACACGTCTGT 59.679 43.478 0.00 0.00 0.00 3.41
4175 7262 2.981859 ACTTTCTGGACACGTCTGTT 57.018 45.000 0.00 0.00 0.00 3.16
4176 7263 2.822764 ACTTTCTGGACACGTCTGTTC 58.177 47.619 0.00 0.00 0.00 3.18
4177 7264 2.431057 ACTTTCTGGACACGTCTGTTCT 59.569 45.455 0.00 0.00 0.00 3.01
4178 7265 2.795175 TTCTGGACACGTCTGTTCTC 57.205 50.000 0.00 0.00 0.00 2.87
4179 7266 0.591659 TCTGGACACGTCTGTTCTCG 59.408 55.000 0.00 0.00 0.00 4.04
4180 7267 0.311165 CTGGACACGTCTGTTCTCGT 59.689 55.000 0.00 0.00 40.99 4.18
4188 7275 3.822996 ACGTCTGTTCTCGTGTTCTATG 58.177 45.455 0.00 0.00 38.85 2.23
4189 7276 3.252701 ACGTCTGTTCTCGTGTTCTATGT 59.747 43.478 0.00 0.00 38.85 2.29
4190 7277 4.227538 CGTCTGTTCTCGTGTTCTATGTT 58.772 43.478 0.00 0.00 0.00 2.71
4191 7278 4.680110 CGTCTGTTCTCGTGTTCTATGTTT 59.320 41.667 0.00 0.00 0.00 2.83
4192 7279 5.854866 CGTCTGTTCTCGTGTTCTATGTTTA 59.145 40.000 0.00 0.00 0.00 2.01
4193 7280 6.361481 CGTCTGTTCTCGTGTTCTATGTTTAA 59.639 38.462 0.00 0.00 0.00 1.52
4194 7281 7.499868 GTCTGTTCTCGTGTTCTATGTTTAAC 58.500 38.462 0.00 0.00 0.00 2.01
4195 7282 7.168637 GTCTGTTCTCGTGTTCTATGTTTAACA 59.831 37.037 0.00 0.00 33.35 2.41
4196 7283 7.870954 TCTGTTCTCGTGTTCTATGTTTAACAT 59.129 33.333 15.22 15.22 42.35 2.71
4197 7284 7.792925 TGTTCTCGTGTTCTATGTTTAACATG 58.207 34.615 19.55 10.19 39.53 3.21
4198 7285 7.439955 TGTTCTCGTGTTCTATGTTTAACATGT 59.560 33.333 19.55 0.00 39.53 3.21
4199 7286 8.918658 GTTCTCGTGTTCTATGTTTAACATGTA 58.081 33.333 19.55 5.59 39.53 2.29
4200 7287 8.456904 TCTCGTGTTCTATGTTTAACATGTAC 57.543 34.615 19.55 14.03 39.53 2.90
4201 7288 7.268186 TCGTGTTCTATGTTTAACATGTACG 57.732 36.000 19.55 18.85 39.53 3.67
4202 7289 7.083230 TCGTGTTCTATGTTTAACATGTACGA 58.917 34.615 19.55 20.34 39.53 3.43
4203 7290 7.594386 TCGTGTTCTATGTTTAACATGTACGAA 59.406 33.333 19.55 13.06 39.53 3.85
4204 7291 8.377681 CGTGTTCTATGTTTAACATGTACGAAT 58.622 33.333 19.55 0.00 39.53 3.34
4205 7292 9.472995 GTGTTCTATGTTTAACATGTACGAATG 57.527 33.333 19.55 0.00 39.53 2.67
4206 7293 8.661257 TGTTCTATGTTTAACATGTACGAATGG 58.339 33.333 19.55 0.00 39.53 3.16
4207 7294 7.241663 TCTATGTTTAACATGTACGAATGGC 57.758 36.000 19.55 0.00 39.53 4.40
4208 7295 4.688511 TGTTTAACATGTACGAATGGCC 57.311 40.909 0.00 0.00 31.46 5.36
4209 7296 3.440872 TGTTTAACATGTACGAATGGCCC 59.559 43.478 0.00 0.00 31.46 5.80
4210 7297 3.351794 TTAACATGTACGAATGGCCCA 57.648 42.857 0.00 0.00 31.46 5.36
4211 7298 1.459450 AACATGTACGAATGGCCCAC 58.541 50.000 0.00 0.00 31.46 4.61
4212 7299 0.393808 ACATGTACGAATGGCCCACC 60.394 55.000 0.00 0.00 31.46 4.61
4213 7300 1.153249 ATGTACGAATGGCCCACCG 60.153 57.895 0.00 2.85 39.70 4.94
4214 7301 1.618876 ATGTACGAATGGCCCACCGA 61.619 55.000 13.40 0.00 39.70 4.69
4215 7302 1.812507 GTACGAATGGCCCACCGAC 60.813 63.158 13.40 4.82 39.70 4.79
4216 7303 1.985662 TACGAATGGCCCACCGACT 60.986 57.895 13.40 0.00 39.70 4.18
4217 7304 1.952102 TACGAATGGCCCACCGACTC 61.952 60.000 13.40 0.00 39.70 3.36
4218 7305 2.668632 GAATGGCCCACCGACTCA 59.331 61.111 0.00 0.00 39.70 3.41
4219 7306 1.745489 GAATGGCCCACCGACTCAC 60.745 63.158 0.00 0.00 39.70 3.51
4220 7307 3.268103 AATGGCCCACCGACTCACC 62.268 63.158 0.00 0.00 39.70 4.02
4244 7331 4.069232 CGCCCGGAGCTGAGTGAA 62.069 66.667 0.73 0.00 40.39 3.18
4245 7332 2.125350 GCCCGGAGCTGAGTGAAG 60.125 66.667 0.73 0.00 38.99 3.02
4246 7333 2.948720 GCCCGGAGCTGAGTGAAGT 61.949 63.158 0.73 0.00 38.99 3.01
4247 7334 1.079543 CCCGGAGCTGAGTGAAGTG 60.080 63.158 0.73 0.00 0.00 3.16
4248 7335 1.536073 CCCGGAGCTGAGTGAAGTGA 61.536 60.000 0.73 0.00 0.00 3.41
4249 7336 0.534412 CCGGAGCTGAGTGAAGTGAT 59.466 55.000 0.00 0.00 0.00 3.06
4250 7337 1.470632 CCGGAGCTGAGTGAAGTGATC 60.471 57.143 0.00 0.00 0.00 2.92
4251 7338 1.796982 CGGAGCTGAGTGAAGTGATCG 60.797 57.143 0.00 0.00 0.00 3.69
4252 7339 1.474478 GGAGCTGAGTGAAGTGATCGA 59.526 52.381 0.00 0.00 0.00 3.59
4253 7340 2.525055 GAGCTGAGTGAAGTGATCGAC 58.475 52.381 0.00 0.00 0.00 4.20
4254 7341 2.163412 GAGCTGAGTGAAGTGATCGACT 59.837 50.000 0.00 0.00 35.94 4.18
4255 7342 2.163412 AGCTGAGTGAAGTGATCGACTC 59.837 50.000 0.00 0.00 37.04 3.36
4256 7343 2.163412 GCTGAGTGAAGTGATCGACTCT 59.837 50.000 0.00 0.00 37.23 3.24
4257 7344 3.366883 GCTGAGTGAAGTGATCGACTCTT 60.367 47.826 0.00 0.00 37.23 2.85
4258 7345 4.165036 CTGAGTGAAGTGATCGACTCTTG 58.835 47.826 0.00 0.00 37.23 3.02
4259 7346 3.057245 TGAGTGAAGTGATCGACTCTTGG 60.057 47.826 0.00 0.00 37.23 3.61
4260 7347 2.232452 AGTGAAGTGATCGACTCTTGGG 59.768 50.000 0.00 0.00 31.73 4.12
4261 7348 2.028930 GTGAAGTGATCGACTCTTGGGT 60.029 50.000 0.00 0.00 31.73 4.51
4262 7349 2.029020 TGAAGTGATCGACTCTTGGGTG 60.029 50.000 0.00 0.00 31.73 4.61
4263 7350 1.924731 AGTGATCGACTCTTGGGTGA 58.075 50.000 0.00 0.00 0.00 4.02
4264 7351 1.546476 AGTGATCGACTCTTGGGTGAC 59.454 52.381 0.00 0.00 0.00 3.67
4265 7352 1.546476 GTGATCGACTCTTGGGTGACT 59.454 52.381 0.00 0.00 0.00 3.41
4266 7353 1.819288 TGATCGACTCTTGGGTGACTC 59.181 52.381 0.00 0.00 0.00 3.36
4267 7354 1.819288 GATCGACTCTTGGGTGACTCA 59.181 52.381 0.00 0.00 0.00 3.41
4268 7355 1.248486 TCGACTCTTGGGTGACTCAG 58.752 55.000 0.00 0.00 0.00 3.35
4269 7356 0.244994 CGACTCTTGGGTGACTCAGG 59.755 60.000 0.00 0.00 0.00 3.86
4270 7357 0.610687 GACTCTTGGGTGACTCAGGG 59.389 60.000 0.00 0.00 0.00 4.45
4271 7358 0.838122 ACTCTTGGGTGACTCAGGGG 60.838 60.000 0.00 0.00 0.00 4.79
4272 7359 0.838122 CTCTTGGGTGACTCAGGGGT 60.838 60.000 0.00 0.00 0.00 4.95
4273 7360 0.490017 TCTTGGGTGACTCAGGGGTA 59.510 55.000 0.00 0.00 0.00 3.69
4274 7361 0.905357 CTTGGGTGACTCAGGGGTAG 59.095 60.000 0.00 0.00 0.00 3.18
4275 7362 0.546747 TTGGGTGACTCAGGGGTAGG 60.547 60.000 0.00 0.00 0.00 3.18
4276 7363 1.080538 GGGTGACTCAGGGGTAGGT 59.919 63.158 0.00 0.00 0.00 3.08
4277 7364 0.337428 GGGTGACTCAGGGGTAGGTA 59.663 60.000 0.00 0.00 0.00 3.08
4278 7365 1.688627 GGGTGACTCAGGGGTAGGTAG 60.689 61.905 0.00 0.00 0.00 3.18
4279 7366 1.688627 GGTGACTCAGGGGTAGGTAGG 60.689 61.905 0.00 0.00 0.00 3.18
4280 7367 0.635009 TGACTCAGGGGTAGGTAGGG 59.365 60.000 0.00 0.00 0.00 3.53
4281 7368 0.635555 GACTCAGGGGTAGGTAGGGT 59.364 60.000 0.00 0.00 0.00 4.34
4282 7369 0.635555 ACTCAGGGGTAGGTAGGGTC 59.364 60.000 0.00 0.00 0.00 4.46
4283 7370 0.105607 CTCAGGGGTAGGTAGGGTCC 60.106 65.000 0.00 0.00 0.00 4.46
4284 7371 1.074699 CAGGGGTAGGTAGGGTCCC 60.075 68.421 0.00 0.00 39.22 4.46
4285 7372 2.123121 GGGGTAGGTAGGGTCCCG 60.123 72.222 0.99 0.00 40.72 5.14
4286 7373 2.692374 GGGTAGGTAGGGTCCCGT 59.308 66.667 0.99 0.00 0.00 5.28
4287 7374 1.002145 GGGTAGGTAGGGTCCCGTT 59.998 63.158 0.99 0.00 0.00 4.44
4288 7375 1.332889 GGGTAGGTAGGGTCCCGTTG 61.333 65.000 0.99 0.00 0.00 4.10
4289 7376 1.519246 GTAGGTAGGGTCCCGTTGC 59.481 63.158 0.99 0.00 0.00 4.17
4290 7377 1.686800 TAGGTAGGGTCCCGTTGCC 60.687 63.158 0.99 0.00 0.00 4.52
4291 7378 4.462280 GGTAGGGTCCCGTTGCCG 62.462 72.222 0.99 0.00 0.00 5.69
4309 7396 3.246112 CCACCACCCCTCCGTGAA 61.246 66.667 0.00 0.00 35.68 3.18
4310 7397 2.347490 CACCACCCCTCCGTGAAG 59.653 66.667 0.00 0.00 35.68 3.02
4311 7398 3.637273 ACCACCCCTCCGTGAAGC 61.637 66.667 0.00 0.00 35.68 3.86
4312 7399 3.322466 CCACCCCTCCGTGAAGCT 61.322 66.667 0.00 0.00 35.68 3.74
4313 7400 2.046892 CACCCCTCCGTGAAGCTG 60.047 66.667 0.00 0.00 35.68 4.24
4314 7401 3.322466 ACCCCTCCGTGAAGCTGG 61.322 66.667 0.00 0.00 0.00 4.85
4315 7402 4.785453 CCCCTCCGTGAAGCTGGC 62.785 72.222 0.00 0.00 0.00 4.85
4317 7404 4.379243 CCTCCGTGAAGCTGGCGT 62.379 66.667 0.00 0.00 0.00 5.68
4318 7405 2.811317 CTCCGTGAAGCTGGCGTC 60.811 66.667 1.80 1.80 0.00 5.19
4319 7406 3.573772 CTCCGTGAAGCTGGCGTCA 62.574 63.158 7.08 7.08 32.43 4.35
4320 7407 3.114616 CCGTGAAGCTGGCGTCAG 61.115 66.667 14.01 14.01 43.64 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.142381 GCACAACACTTCCTCACTTCTTTT 60.142 41.667 0.00 0.00 0.00 2.27
18 19 3.378427 GCACAACACTTCCTCACTTCTTT 59.622 43.478 0.00 0.00 0.00 2.52
19 20 2.945668 GCACAACACTTCCTCACTTCTT 59.054 45.455 0.00 0.00 0.00 2.52
20 21 2.565841 GCACAACACTTCCTCACTTCT 58.434 47.619 0.00 0.00 0.00 2.85
21 22 1.261619 CGCACAACACTTCCTCACTTC 59.738 52.381 0.00 0.00 0.00 3.01
22 23 1.299541 CGCACAACACTTCCTCACTT 58.700 50.000 0.00 0.00 0.00 3.16
23 24 0.178068 ACGCACAACACTTCCTCACT 59.822 50.000 0.00 0.00 0.00 3.41
25 26 2.831685 ATACGCACAACACTTCCTCA 57.168 45.000 0.00 0.00 0.00 3.86
26 27 6.040878 AGTAATATACGCACAACACTTCCTC 58.959 40.000 0.00 0.00 0.00 3.71
27 28 5.974108 AGTAATATACGCACAACACTTCCT 58.026 37.500 0.00 0.00 0.00 3.36
29 30 6.534079 AGGAAGTAATATACGCACAACACTTC 59.466 38.462 0.00 0.00 39.76 3.01
30 31 6.403878 AGGAAGTAATATACGCACAACACTT 58.596 36.000 0.00 0.00 0.00 3.16
32 33 5.233689 GGAGGAAGTAATATACGCACAACAC 59.766 44.000 0.00 0.00 0.00 3.32
33 34 5.128171 AGGAGGAAGTAATATACGCACAACA 59.872 40.000 0.00 0.00 0.00 3.33
36 37 5.864418 AAGGAGGAAGTAATATACGCACA 57.136 39.130 0.00 0.00 0.00 4.57
37 38 5.695363 GGAAAGGAGGAAGTAATATACGCAC 59.305 44.000 0.00 0.00 0.00 5.34
38 39 5.364446 TGGAAAGGAGGAAGTAATATACGCA 59.636 40.000 0.00 0.00 0.00 5.24
39 40 5.850614 TGGAAAGGAGGAAGTAATATACGC 58.149 41.667 0.00 0.00 0.00 4.42
44 45 9.681062 CTGTAATTTGGAAAGGAGGAAGTAATA 57.319 33.333 0.00 0.00 0.00 0.98
45 46 8.170730 ACTGTAATTTGGAAAGGAGGAAGTAAT 58.829 33.333 0.00 0.00 0.00 1.89
46 47 7.447238 CACTGTAATTTGGAAAGGAGGAAGTAA 59.553 37.037 0.00 0.00 0.00 2.24
47 48 6.940298 CACTGTAATTTGGAAAGGAGGAAGTA 59.060 38.462 0.00 0.00 0.00 2.24
48 49 5.770162 CACTGTAATTTGGAAAGGAGGAAGT 59.230 40.000 0.00 0.00 0.00 3.01
49 50 5.770162 ACACTGTAATTTGGAAAGGAGGAAG 59.230 40.000 0.00 0.00 0.00 3.46
50 51 5.701224 ACACTGTAATTTGGAAAGGAGGAA 58.299 37.500 0.00 0.00 0.00 3.36
51 52 5.319043 ACACTGTAATTTGGAAAGGAGGA 57.681 39.130 0.00 0.00 0.00 3.71
52 53 6.884295 TCATACACTGTAATTTGGAAAGGAGG 59.116 38.462 0.00 0.00 0.00 4.30
53 54 7.921786 TCATACACTGTAATTTGGAAAGGAG 57.078 36.000 0.00 0.00 0.00 3.69
54 55 8.877864 AATCATACACTGTAATTTGGAAAGGA 57.122 30.769 0.00 0.00 0.00 3.36
55 56 9.927668 AAAATCATACACTGTAATTTGGAAAGG 57.072 29.630 0.00 0.00 0.00 3.11
69 70 9.846248 GCTAACATTTCTGAAAAATCATACACT 57.154 29.630 6.95 0.00 0.00 3.55
71 72 9.844790 CAGCTAACATTTCTGAAAAATCATACA 57.155 29.630 6.95 0.00 0.00 2.29
74 75 8.125978 TCCAGCTAACATTTCTGAAAAATCAT 57.874 30.769 6.95 0.00 0.00 2.45
75 76 7.448161 TCTCCAGCTAACATTTCTGAAAAATCA 59.552 33.333 6.95 0.00 0.00 2.57
77 78 7.309438 GGTCTCCAGCTAACATTTCTGAAAAAT 60.309 37.037 6.95 0.00 0.00 1.82
80 81 5.003804 GGTCTCCAGCTAACATTTCTGAAA 58.996 41.667 5.15 5.15 0.00 2.69
81 82 4.579869 GGTCTCCAGCTAACATTTCTGAA 58.420 43.478 0.00 0.00 0.00 3.02
82 83 3.368427 CGGTCTCCAGCTAACATTTCTGA 60.368 47.826 0.00 0.00 0.00 3.27
83 84 2.932614 CGGTCTCCAGCTAACATTTCTG 59.067 50.000 0.00 0.00 0.00 3.02
84 85 2.567615 ACGGTCTCCAGCTAACATTTCT 59.432 45.455 0.00 0.00 0.00 2.52
85 86 2.930682 GACGGTCTCCAGCTAACATTTC 59.069 50.000 0.00 0.00 0.00 2.17
87 88 1.899814 TGACGGTCTCCAGCTAACATT 59.100 47.619 9.88 0.00 0.00 2.71
88 89 1.478510 CTGACGGTCTCCAGCTAACAT 59.521 52.381 9.88 0.00 0.00 2.71
95 96 2.575993 CTGGCTGACGGTCTCCAG 59.424 66.667 24.59 24.59 39.95 3.86
96 97 2.997315 CCTGGCTGACGGTCTCCA 60.997 66.667 17.35 17.35 0.00 3.86
97 98 2.232298 CTTCCTGGCTGACGGTCTCC 62.232 65.000 9.88 10.77 0.00 3.71
98 99 1.216710 CTTCCTGGCTGACGGTCTC 59.783 63.158 9.88 1.31 0.00 3.36
99 100 2.948720 GCTTCCTGGCTGACGGTCT 61.949 63.158 9.88 0.00 0.00 3.85
100 101 2.435059 GCTTCCTGGCTGACGGTC 60.435 66.667 0.00 0.00 0.00 4.79
101 102 4.021925 GGCTTCCTGGCTGACGGT 62.022 66.667 0.00 0.00 38.32 4.83
102 103 3.551496 TTGGCTTCCTGGCTGACGG 62.551 63.158 0.00 0.00 42.34 4.79
103 104 2.032528 TTGGCTTCCTGGCTGACG 59.967 61.111 0.00 0.00 42.34 4.35
106 107 1.676967 GGAGTTGGCTTCCTGGCTG 60.677 63.158 0.00 0.00 42.34 4.85
111 112 0.250338 GTCGTTGGAGTTGGCTTCCT 60.250 55.000 5.20 0.00 0.00 3.36
112 113 1.235281 GGTCGTTGGAGTTGGCTTCC 61.235 60.000 0.00 0.00 0.00 3.46
114 115 1.228154 GGGTCGTTGGAGTTGGCTT 60.228 57.895 0.00 0.00 0.00 4.35
115 116 2.430367 GGGTCGTTGGAGTTGGCT 59.570 61.111 0.00 0.00 0.00 4.75
117 118 0.179001 AAAGGGGTCGTTGGAGTTGG 60.179 55.000 0.00 0.00 0.00 3.77
118 119 1.607148 GAAAAGGGGTCGTTGGAGTTG 59.393 52.381 0.00 0.00 0.00 3.16
119 120 1.478105 GGAAAAGGGGTCGTTGGAGTT 60.478 52.381 0.00 0.00 0.00 3.01
120 121 0.109913 GGAAAAGGGGTCGTTGGAGT 59.890 55.000 0.00 0.00 0.00 3.85
121 122 0.400594 AGGAAAAGGGGTCGTTGGAG 59.599 55.000 0.00 0.00 0.00 3.86
122 123 0.109723 CAGGAAAAGGGGTCGTTGGA 59.890 55.000 0.00 0.00 0.00 3.53
123 124 1.524008 GCAGGAAAAGGGGTCGTTGG 61.524 60.000 0.00 0.00 0.00 3.77
124 125 1.524008 GGCAGGAAAAGGGGTCGTTG 61.524 60.000 0.00 0.00 0.00 4.10
125 126 1.228459 GGCAGGAAAAGGGGTCGTT 60.228 57.895 0.00 0.00 0.00 3.85
126 127 2.434774 GGCAGGAAAAGGGGTCGT 59.565 61.111 0.00 0.00 0.00 4.34
127 128 2.175035 TACGGCAGGAAAAGGGGTCG 62.175 60.000 0.00 0.00 0.00 4.79
129 130 1.377612 GTACGGCAGGAAAAGGGGT 59.622 57.895 0.00 0.00 0.00 4.95
130 131 1.743995 CGTACGGCAGGAAAAGGGG 60.744 63.158 7.57 0.00 0.00 4.79
132 133 1.349259 CGTCGTACGGCAGGAAAAGG 61.349 60.000 21.20 0.00 38.08 3.11
133 134 1.952266 GCGTCGTACGGCAGGAAAAG 61.952 60.000 21.20 2.31 42.82 2.27
134 135 2.023223 GCGTCGTACGGCAGGAAAA 61.023 57.895 21.20 0.00 42.82 2.29
135 136 2.431260 GCGTCGTACGGCAGGAAA 60.431 61.111 21.20 0.00 42.82 3.13
136 137 4.764336 CGCGTCGTACGGCAGGAA 62.764 66.667 21.20 0.00 42.82 3.36
153 154 1.832411 GATAAAGCTAGCACCGCGGC 61.832 60.000 28.58 12.97 33.98 6.53
154 155 0.249489 AGATAAAGCTAGCACCGCGG 60.249 55.000 26.86 26.86 0.00 6.46
155 156 0.855349 CAGATAAAGCTAGCACCGCG 59.145 55.000 18.83 0.00 0.00 6.46
156 157 1.941325 ACAGATAAAGCTAGCACCGC 58.059 50.000 18.83 1.94 0.00 5.68
157 158 6.604735 AAATAACAGATAAAGCTAGCACCG 57.395 37.500 18.83 0.17 0.00 4.94
158 159 7.985476 TCAAAATAACAGATAAAGCTAGCACC 58.015 34.615 18.83 0.63 0.00 5.01
159 160 9.495754 CTTCAAAATAACAGATAAAGCTAGCAC 57.504 33.333 18.83 2.79 0.00 4.40
160 161 9.231297 ACTTCAAAATAACAGATAAAGCTAGCA 57.769 29.630 18.83 0.00 0.00 3.49
192 193 9.760660 CAACAATGGAAAAACGAAAATAAACAA 57.239 25.926 0.00 0.00 0.00 2.83
193 194 9.151471 TCAACAATGGAAAAACGAAAATAAACA 57.849 25.926 0.00 0.00 0.00 2.83
194 195 9.974750 TTCAACAATGGAAAAACGAAAATAAAC 57.025 25.926 0.00 0.00 0.00 2.01
196 197 9.974750 GTTTCAACAATGGAAAAACGAAAATAA 57.025 25.926 0.00 0.00 36.14 1.40
197 198 8.604890 GGTTTCAACAATGGAAAAACGAAAATA 58.395 29.630 0.00 0.00 36.14 1.40
198 199 7.119846 TGGTTTCAACAATGGAAAAACGAAAAT 59.880 29.630 0.00 0.00 36.14 1.82
199 200 6.426937 TGGTTTCAACAATGGAAAAACGAAAA 59.573 30.769 0.00 0.00 36.14 2.29
201 202 5.479306 TGGTTTCAACAATGGAAAAACGAA 58.521 33.333 0.00 0.00 36.14 3.85
202 203 5.073311 TGGTTTCAACAATGGAAAAACGA 57.927 34.783 0.00 0.00 36.14 3.85
203 204 5.786401 TTGGTTTCAACAATGGAAAAACG 57.214 34.783 0.00 0.00 36.14 3.60
204 205 8.978564 ATTTTTGGTTTCAACAATGGAAAAAC 57.021 26.923 0.00 0.00 36.14 2.43
205 206 9.631452 GAATTTTTGGTTTCAACAATGGAAAAA 57.369 25.926 0.00 0.00 34.59 1.94
206 207 8.246871 GGAATTTTTGGTTTCAACAATGGAAAA 58.753 29.630 0.00 0.00 34.59 2.29
207 208 7.148000 GGGAATTTTTGGTTTCAACAATGGAAA 60.148 33.333 0.00 0.00 34.59 3.13
208 209 6.319911 GGGAATTTTTGGTTTCAACAATGGAA 59.680 34.615 0.00 0.00 34.59 3.53
209 210 5.825151 GGGAATTTTTGGTTTCAACAATGGA 59.175 36.000 0.00 0.00 34.59 3.41
212 213 5.675538 TCGGGAATTTTTGGTTTCAACAAT 58.324 33.333 0.00 0.00 35.50 2.71
213 214 5.086104 TCGGGAATTTTTGGTTTCAACAA 57.914 34.783 0.00 0.00 31.78 2.83
214 215 4.737855 TCGGGAATTTTTGGTTTCAACA 57.262 36.364 0.00 0.00 31.78 3.33
215 216 6.612247 AATTCGGGAATTTTTGGTTTCAAC 57.388 33.333 0.89 0.00 37.74 3.18
320 2407 8.608844 AATAAAATCGCCATCCTCTAAGTAAG 57.391 34.615 0.00 0.00 0.00 2.34
328 2416 7.625185 GCTCTTGATAATAAAATCGCCATCCTC 60.625 40.741 0.00 0.00 0.00 3.71
333 2421 6.882610 ATGCTCTTGATAATAAAATCGCCA 57.117 33.333 0.00 0.00 0.00 5.69
376 2627 8.514594 CCATCGTCTTTATAAAATATGCCATGT 58.485 33.333 0.00 0.00 0.00 3.21
459 2711 9.736023 CCAATACTAAAAATGCAATCCTCTTAC 57.264 33.333 0.00 0.00 0.00 2.34
479 2731 8.632679 TCATAAAGAAATGGCATCTTCCAATAC 58.367 33.333 0.00 0.00 39.96 1.89
484 2736 7.148018 TGTCTTCATAAAGAAATGGCATCTTCC 60.148 37.037 0.00 0.00 43.04 3.46
524 2792 7.101054 ACATCATATAAAAATCATGCATGGCC 58.899 34.615 25.97 0.00 0.00 5.36
612 3198 7.619965 AGAAAAGGGAAGAAATGACAAACAAA 58.380 30.769 0.00 0.00 0.00 2.83
614 3200 6.790232 AGAAAAGGGAAGAAATGACAAACA 57.210 33.333 0.00 0.00 0.00 2.83
615 3201 8.360390 ACATAGAAAAGGGAAGAAATGACAAAC 58.640 33.333 0.00 0.00 0.00 2.93
616 3202 8.477419 ACATAGAAAAGGGAAGAAATGACAAA 57.523 30.769 0.00 0.00 0.00 2.83
626 3237 5.893824 AGCCCATTTACATAGAAAAGGGAAG 59.106 40.000 12.22 0.00 46.08 3.46
642 3255 1.675219 CAAGCCTTGCAGCCCATTT 59.325 52.632 0.00 0.00 0.00 2.32
684 3298 1.134367 CGATTAGCCAGACGAACCAGA 59.866 52.381 0.00 0.00 0.00 3.86
734 3370 2.665603 GGCTCACTGTCACCTCCC 59.334 66.667 0.00 0.00 0.00 4.30
784 3459 0.242825 TCAAGCACTAACCCGACTCG 59.757 55.000 0.00 0.00 0.00 4.18
789 3464 2.093973 AGTCAGATCAAGCACTAACCCG 60.094 50.000 0.00 0.00 0.00 5.28
795 3470 2.836372 TGATGGAGTCAGATCAAGCACT 59.164 45.455 0.00 0.00 31.80 4.40
809 3484 1.139734 CCACGACTCGGTGATGGAG 59.860 63.158 2.98 0.00 40.38 3.86
851 3532 7.987268 GGTACACACATATATGTATCCATCG 57.013 40.000 17.86 6.78 39.39 3.84
879 3562 2.765689 TTTCTGGCTTTCAAGGGGAA 57.234 45.000 0.00 0.00 0.00 3.97
923 3736 2.932622 GCGGTCTTCTGATTTCTCTGCA 60.933 50.000 0.00 0.00 0.00 4.41
939 3794 1.826487 GGAGAGGAGAGGAGCGGTC 60.826 68.421 5.93 5.93 0.00 4.79
940 3795 2.277404 GGAGAGGAGAGGAGCGGT 59.723 66.667 0.00 0.00 0.00 5.68
941 3796 1.528309 GAGGAGAGGAGAGGAGCGG 60.528 68.421 0.00 0.00 0.00 5.52
942 3797 0.106719 AAGAGGAGAGGAGAGGAGCG 60.107 60.000 0.00 0.00 0.00 5.03
943 3798 1.341976 ACAAGAGGAGAGGAGAGGAGC 60.342 57.143 0.00 0.00 0.00 4.70
944 3799 2.826674 ACAAGAGGAGAGGAGAGGAG 57.173 55.000 0.00 0.00 0.00 3.69
945 3800 3.169099 CAAACAAGAGGAGAGGAGAGGA 58.831 50.000 0.00 0.00 0.00 3.71
946 3801 2.235898 CCAAACAAGAGGAGAGGAGAGG 59.764 54.545 0.00 0.00 0.00 3.69
947 3802 3.169099 TCCAAACAAGAGGAGAGGAGAG 58.831 50.000 0.00 0.00 0.00 3.20
948 3803 3.260269 TCCAAACAAGAGGAGAGGAGA 57.740 47.619 0.00 0.00 0.00 3.71
949 3804 3.430098 CGATCCAAACAAGAGGAGAGGAG 60.430 52.174 0.00 0.00 37.34 3.69
950 3805 2.497675 CGATCCAAACAAGAGGAGAGGA 59.502 50.000 0.00 0.00 37.34 3.71
951 3806 2.497675 TCGATCCAAACAAGAGGAGAGG 59.502 50.000 0.00 0.00 37.34 3.69
952 3807 3.876274 TCGATCCAAACAAGAGGAGAG 57.124 47.619 0.00 0.00 37.34 3.20
953 3808 4.283467 TCTTTCGATCCAAACAAGAGGAGA 59.717 41.667 0.00 0.00 37.34 3.71
954 3809 4.569943 TCTTTCGATCCAAACAAGAGGAG 58.430 43.478 0.00 0.00 37.34 3.69
955 3810 4.283467 TCTCTTTCGATCCAAACAAGAGGA 59.717 41.667 16.69 5.41 40.55 3.71
956 3811 4.569943 TCTCTTTCGATCCAAACAAGAGG 58.430 43.478 16.69 3.67 40.55 3.69
957 3812 5.928839 TCTTCTCTTTCGATCCAAACAAGAG 59.071 40.000 12.51 12.51 41.22 2.85
958 3813 5.853936 TCTTCTCTTTCGATCCAAACAAGA 58.146 37.500 0.00 0.00 0.00 3.02
959 3814 5.928839 TCTCTTCTCTTTCGATCCAAACAAG 59.071 40.000 0.00 0.00 0.00 3.16
960 3815 5.853936 TCTCTTCTCTTTCGATCCAAACAA 58.146 37.500 0.00 0.00 0.00 2.83
961 3816 5.468540 TCTCTTCTCTTTCGATCCAAACA 57.531 39.130 0.00 0.00 0.00 2.83
962 3817 6.159988 TCTTCTCTTCTCTTTCGATCCAAAC 58.840 40.000 0.00 0.00 0.00 2.93
963 3818 6.209589 TCTCTTCTCTTCTCTTTCGATCCAAA 59.790 38.462 0.00 0.00 0.00 3.28
964 3819 5.712446 TCTCTTCTCTTCTCTTTCGATCCAA 59.288 40.000 0.00 0.00 0.00 3.53
965 3820 5.257262 TCTCTTCTCTTCTCTTTCGATCCA 58.743 41.667 0.00 0.00 0.00 3.41
966 3821 5.828299 TCTCTTCTCTTCTCTTTCGATCC 57.172 43.478 0.00 0.00 0.00 3.36
967 3822 7.065803 TCTCTTCTCTTCTCTTCTCTTTCGATC 59.934 40.741 0.00 0.00 0.00 3.69
968 3823 6.884295 TCTCTTCTCTTCTCTTCTCTTTCGAT 59.116 38.462 0.00 0.00 0.00 3.59
969 3824 6.234920 TCTCTTCTCTTCTCTTCTCTTTCGA 58.765 40.000 0.00 0.00 0.00 3.71
970 3825 6.371548 TCTCTCTTCTCTTCTCTTCTCTTTCG 59.628 42.308 0.00 0.00 0.00 3.46
971 3826 7.687941 TCTCTCTTCTCTTCTCTTCTCTTTC 57.312 40.000 0.00 0.00 0.00 2.62
972 3827 7.944554 TCTTCTCTCTTCTCTTCTCTTCTCTTT 59.055 37.037 0.00 0.00 0.00 2.52
1440 4301 3.059120 CGACAATCATGTGCATCTCATCC 60.059 47.826 0.00 0.00 40.74 3.51
1443 4304 2.282407 CCGACAATCATGTGCATCTCA 58.718 47.619 0.00 0.00 40.74 3.27
1811 4684 5.801444 CGACAATTTATTCAAGATGCTGCAA 59.199 36.000 6.36 0.00 0.00 4.08
1813 4686 5.572211 TCGACAATTTATTCAAGATGCTGC 58.428 37.500 0.00 0.00 0.00 5.25
1814 4687 8.624701 AAATCGACAATTTATTCAAGATGCTG 57.375 30.769 0.00 0.00 35.77 4.41
1815 4688 9.079833 CAAAATCGACAATTTATTCAAGATGCT 57.920 29.630 0.00 0.00 36.54 3.79
2062 4946 5.162794 CGAAAGAACATGGCATGATCAAAA 58.837 37.500 32.74 0.00 34.84 2.44
2064 4948 3.758023 ACGAAAGAACATGGCATGATCAA 59.242 39.130 32.74 0.00 34.84 2.57
2067 4952 7.445096 TCATATAACGAAAGAACATGGCATGAT 59.555 33.333 32.74 22.34 0.00 2.45
2472 5370 5.059161 TGTGAGACATGAGAAGGAAGTTTG 58.941 41.667 0.00 0.00 0.00 2.93
2744 5644 3.490761 CCGTGCAGTTTCCATGTTTTCTT 60.491 43.478 0.00 0.00 0.00 2.52
2818 5719 0.403271 ATCAGCAGAGTGCCCAACTT 59.597 50.000 0.00 0.00 46.52 2.66
3451 6448 4.202441 ACAGGCCATTTTGCTACAGATAG 58.798 43.478 5.01 0.00 0.00 2.08
3470 6467 6.677781 TCTCACAAACCTGAAGTTTTACAG 57.322 37.500 0.00 0.00 46.79 2.74
3537 6545 2.094545 GGTTTTCATCTGTGGGCACATC 60.095 50.000 0.00 0.00 41.01 3.06
3538 6546 1.895131 GGTTTTCATCTGTGGGCACAT 59.105 47.619 0.00 0.00 41.01 3.21
3548 6556 7.102346 CAGTCAGTCATTAGAGGTTTTCATCT 58.898 38.462 0.00 0.00 43.60 2.90
3562 6570 4.281941 TCAACTCAGTAGCAGTCAGTCATT 59.718 41.667 0.00 0.00 0.00 2.57
3625 6641 1.631405 TGCTTGGGGGAAAATGACAG 58.369 50.000 0.00 0.00 0.00 3.51
3627 6643 1.405933 GCATGCTTGGGGGAAAATGAC 60.406 52.381 11.37 0.00 0.00 3.06
3628 6644 0.903942 GCATGCTTGGGGGAAAATGA 59.096 50.000 11.37 0.00 0.00 2.57
3629 6645 0.614294 TGCATGCTTGGGGGAAAATG 59.386 50.000 20.33 0.00 0.00 2.32
3630 6646 1.487558 GATGCATGCTTGGGGGAAAAT 59.512 47.619 20.33 0.00 0.00 1.82
3642 6675 1.002468 GAATACGTGTGGGATGCATGC 60.002 52.381 11.82 11.82 0.00 4.06
3643 6676 1.603802 GGAATACGTGTGGGATGCATG 59.396 52.381 2.46 0.00 0.00 4.06
3645 6678 0.107410 GGGAATACGTGTGGGATGCA 60.107 55.000 0.00 0.00 0.00 3.96
3647 6680 0.177141 ACGGGAATACGTGTGGGATG 59.823 55.000 0.00 0.00 46.64 3.51
3649 6682 4.116926 ACGGGAATACGTGTGGGA 57.883 55.556 0.00 0.00 46.64 4.37
3664 6702 2.811317 GGCAGCGGAGAGTCAACG 60.811 66.667 0.00 0.00 0.00 4.10
3665 6703 2.811317 CGGCAGCGGAGAGTCAAC 60.811 66.667 0.00 0.00 0.00 3.18
3685 6723 8.027189 AGCAAAAAGTCGTTTATATTCCCTTTC 58.973 33.333 0.00 0.00 0.00 2.62
3697 6735 0.248866 CGGCCAGCAAAAAGTCGTTT 60.249 50.000 2.24 0.00 0.00 3.60
3753 6816 2.122954 AGAGAGAAGGGCGGGGTT 59.877 61.111 0.00 0.00 0.00 4.11
3754 6817 2.685380 CAGAGAGAAGGGCGGGGT 60.685 66.667 0.00 0.00 0.00 4.95
3755 6818 3.474570 CCAGAGAGAAGGGCGGGG 61.475 72.222 0.00 0.00 0.00 5.73
3756 6819 4.168291 GCCAGAGAGAAGGGCGGG 62.168 72.222 0.00 0.00 38.04 6.13
3759 6822 4.168291 CCCGCCAGAGAGAAGGGC 62.168 72.222 0.00 0.00 44.27 5.19
3760 6823 3.474570 CCCCGCCAGAGAGAAGGG 61.475 72.222 0.00 0.00 41.68 3.95
3761 6824 3.474570 CCCCCGCCAGAGAGAAGG 61.475 72.222 0.00 0.00 0.00 3.46
3762 6825 2.364317 TCCCCCGCCAGAGAGAAG 60.364 66.667 0.00 0.00 0.00 2.85
3763 6826 2.364317 CTCCCCCGCCAGAGAGAA 60.364 66.667 0.00 0.00 31.43 2.87
3764 6827 4.465446 CCTCCCCCGCCAGAGAGA 62.465 72.222 0.00 0.00 31.43 3.10
3765 6828 4.787280 ACCTCCCCCGCCAGAGAG 62.787 72.222 0.00 0.00 31.43 3.20
3766 6829 4.332543 AACCTCCCCCGCCAGAGA 62.333 66.667 0.00 0.00 31.43 3.10
3767 6830 3.787001 GAACCTCCCCCGCCAGAG 61.787 72.222 0.00 0.00 0.00 3.35
3768 6831 4.649705 TGAACCTCCCCCGCCAGA 62.650 66.667 0.00 0.00 0.00 3.86
3769 6832 4.101448 CTGAACCTCCCCCGCCAG 62.101 72.222 0.00 0.00 0.00 4.85
3770 6833 4.649705 TCTGAACCTCCCCCGCCA 62.650 66.667 0.00 0.00 0.00 5.69
3771 6834 3.327404 TTCTGAACCTCCCCCGCC 61.327 66.667 0.00 0.00 0.00 6.13
3772 6835 2.046217 GTTCTGAACCTCCCCCGC 60.046 66.667 9.38 0.00 0.00 6.13
3773 6836 1.192146 TCAGTTCTGAACCTCCCCCG 61.192 60.000 16.48 0.00 0.00 5.73
3774 6837 0.325272 GTCAGTTCTGAACCTCCCCC 59.675 60.000 16.48 0.00 0.00 5.40
3775 6838 0.325272 GGTCAGTTCTGAACCTCCCC 59.675 60.000 16.48 8.33 0.00 4.81
3776 6839 1.002544 CTGGTCAGTTCTGAACCTCCC 59.997 57.143 16.48 13.36 0.00 4.30
3777 6840 1.609320 GCTGGTCAGTTCTGAACCTCC 60.609 57.143 16.48 15.50 0.00 4.30
3778 6841 1.802069 GCTGGTCAGTTCTGAACCTC 58.198 55.000 16.48 7.60 0.00 3.85
3779 6842 0.034059 CGCTGGTCAGTTCTGAACCT 59.966 55.000 16.48 2.19 0.00 3.50
3780 6843 1.569479 GCGCTGGTCAGTTCTGAACC 61.569 60.000 16.48 12.69 0.00 3.62
3781 6844 1.862806 GCGCTGGTCAGTTCTGAAC 59.137 57.895 12.54 12.54 0.00 3.18
3782 6845 1.664649 CGCGCTGGTCAGTTCTGAA 60.665 57.895 5.56 0.00 0.00 3.02
3783 6846 2.049156 CGCGCTGGTCAGTTCTGA 60.049 61.111 5.56 0.00 0.00 3.27
3784 6847 2.356313 ACGCGCTGGTCAGTTCTG 60.356 61.111 5.73 0.00 0.00 3.02
3785 6848 2.356313 CACGCGCTGGTCAGTTCT 60.356 61.111 5.73 0.00 0.00 3.01
3786 6849 4.077188 GCACGCGCTGGTCAGTTC 62.077 66.667 5.73 0.00 34.30 3.01
3809 6872 2.360726 TGCCTGCAGCCAGACATG 60.361 61.111 8.66 0.00 41.77 3.21
3810 6873 2.360852 GTGCCTGCAGCCAGACAT 60.361 61.111 8.66 0.00 41.77 3.06
3811 6874 4.648626 GGTGCCTGCAGCCAGACA 62.649 66.667 8.66 0.00 41.77 3.41
3826 6889 1.623542 GGATCAAGGCGGGTACTGGT 61.624 60.000 0.00 0.00 33.56 4.00
3828 6891 1.146263 GGGATCAAGGCGGGTACTG 59.854 63.158 0.00 0.00 38.10 2.74
3829 6892 2.070650 GGGGATCAAGGCGGGTACT 61.071 63.158 0.00 0.00 0.00 2.73
3842 6907 1.141053 GCAAACGAGATAGTGGGGGAT 59.859 52.381 0.00 0.00 0.00 3.85
3863 6928 1.374758 GAGAGAACAGCCCACACGG 60.375 63.158 0.00 0.00 0.00 4.94
3866 6937 0.178921 AGAGGAGAGAACAGCCCACA 60.179 55.000 0.00 0.00 0.00 4.17
3870 6941 0.325203 AGGGAGAGGAGAGAACAGCC 60.325 60.000 0.00 0.00 0.00 4.85
3875 6946 0.930726 GGGAGAGGGAGAGGAGAGAA 59.069 60.000 0.00 0.00 0.00 2.87
3911 6995 2.329267 CCAGACCCCAGATATACAGCA 58.671 52.381 0.00 0.00 0.00 4.41
3918 7002 3.107601 GCATATAGCCAGACCCCAGATA 58.892 50.000 0.00 0.00 37.23 1.98
3920 7004 1.352083 GCATATAGCCAGACCCCAGA 58.648 55.000 0.00 0.00 37.23 3.86
3935 7019 4.580167 GCATATTTTCAGTCACCTGGCATA 59.420 41.667 0.00 0.00 39.31 3.14
3937 7021 2.754552 GCATATTTTCAGTCACCTGGCA 59.245 45.455 0.00 0.00 39.31 4.92
3938 7022 2.754552 TGCATATTTTCAGTCACCTGGC 59.245 45.455 0.00 0.00 39.31 4.85
3939 7023 5.450965 GGAATGCATATTTTCAGTCACCTGG 60.451 44.000 0.00 0.00 39.31 4.45
3979 7064 3.099141 ACATTTAGCCAGTCCCATTTGG 58.901 45.455 0.00 0.00 37.53 3.28
4001 7086 7.158697 ACCCAAATTGCATTTTTAGTAACCTC 58.841 34.615 3.87 0.00 0.00 3.85
4006 7091 5.244178 ACCGACCCAAATTGCATTTTTAGTA 59.756 36.000 3.87 0.00 0.00 1.82
4031 7116 2.561733 TGACGGCTCATAAGAGTTCG 57.438 50.000 9.90 9.90 44.00 3.95
4032 7117 4.494855 GCATTTGACGGCTCATAAGAGTTC 60.495 45.833 0.00 0.00 44.00 3.01
4037 7122 3.374988 TCTTGCATTTGACGGCTCATAAG 59.625 43.478 0.00 0.00 0.00 1.73
4038 7123 3.342719 TCTTGCATTTGACGGCTCATAA 58.657 40.909 0.00 0.00 0.00 1.90
4080 7167 1.585297 TGAACGGTTTTCGGAGGTTC 58.415 50.000 0.00 0.00 44.45 3.62
4094 7181 9.265901 ACCTCAATAGAAGATGAATAATGAACG 57.734 33.333 0.00 0.00 0.00 3.95
4100 7187 8.023706 CGATCGACCTCAATAGAAGATGAATAA 58.976 37.037 10.26 0.00 0.00 1.40
4101 7188 7.175119 ACGATCGACCTCAATAGAAGATGAATA 59.825 37.037 24.34 0.00 0.00 1.75
4103 7190 5.299531 ACGATCGACCTCAATAGAAGATGAA 59.700 40.000 24.34 0.00 0.00 2.57
4135 7222 9.624373 GAAAGTATGTCGGACCCTAGATATATA 57.376 37.037 5.55 0.00 0.00 0.86
4136 7223 8.337739 AGAAAGTATGTCGGACCCTAGATATAT 58.662 37.037 5.55 0.00 0.00 0.86
4137 7224 7.610692 CAGAAAGTATGTCGGACCCTAGATATA 59.389 40.741 5.55 0.00 0.00 0.86
4138 7225 6.434652 CAGAAAGTATGTCGGACCCTAGATAT 59.565 42.308 5.55 0.00 0.00 1.63
4139 7226 5.768662 CAGAAAGTATGTCGGACCCTAGATA 59.231 44.000 5.55 0.00 0.00 1.98
4140 7227 4.585162 CAGAAAGTATGTCGGACCCTAGAT 59.415 45.833 5.55 0.00 0.00 1.98
4141 7228 3.952323 CAGAAAGTATGTCGGACCCTAGA 59.048 47.826 5.55 0.00 0.00 2.43
4142 7229 3.068307 CCAGAAAGTATGTCGGACCCTAG 59.932 52.174 5.55 0.00 0.00 3.02
4143 7230 3.028850 CCAGAAAGTATGTCGGACCCTA 58.971 50.000 5.55 0.00 0.00 3.53
4144 7231 1.831736 CCAGAAAGTATGTCGGACCCT 59.168 52.381 5.55 0.00 0.00 4.34
4145 7232 1.829222 TCCAGAAAGTATGTCGGACCC 59.171 52.381 5.55 0.00 0.00 4.46
4146 7233 2.232941 TGTCCAGAAAGTATGTCGGACC 59.767 50.000 5.55 0.00 41.92 4.46
4147 7234 3.251571 GTGTCCAGAAAGTATGTCGGAC 58.748 50.000 0.00 0.00 42.50 4.79
4148 7235 2.094906 CGTGTCCAGAAAGTATGTCGGA 60.095 50.000 0.00 0.00 0.00 4.55
4149 7236 2.259618 CGTGTCCAGAAAGTATGTCGG 58.740 52.381 0.00 0.00 0.00 4.79
4150 7237 2.915463 GACGTGTCCAGAAAGTATGTCG 59.085 50.000 0.00 0.00 0.00 4.35
4151 7238 3.921021 CAGACGTGTCCAGAAAGTATGTC 59.079 47.826 0.00 0.00 0.00 3.06
4152 7239 3.321111 ACAGACGTGTCCAGAAAGTATGT 59.679 43.478 0.00 0.00 33.21 2.29
4153 7240 3.914312 ACAGACGTGTCCAGAAAGTATG 58.086 45.455 0.00 0.00 26.76 2.39
4154 7241 4.281182 AGAACAGACGTGTCCAGAAAGTAT 59.719 41.667 0.00 0.00 35.08 2.12
4155 7242 3.635373 AGAACAGACGTGTCCAGAAAGTA 59.365 43.478 0.00 0.00 35.08 2.24
4156 7243 2.431057 AGAACAGACGTGTCCAGAAAGT 59.569 45.455 0.00 0.00 35.08 2.66
4157 7244 3.053455 GAGAACAGACGTGTCCAGAAAG 58.947 50.000 0.00 0.00 35.08 2.62
4158 7245 2.543031 CGAGAACAGACGTGTCCAGAAA 60.543 50.000 0.00 0.00 35.08 2.52
4159 7246 1.001706 CGAGAACAGACGTGTCCAGAA 60.002 52.381 0.00 0.00 35.08 3.02
4160 7247 0.591659 CGAGAACAGACGTGTCCAGA 59.408 55.000 0.00 0.00 35.08 3.86
4161 7248 0.311165 ACGAGAACAGACGTGTCCAG 59.689 55.000 0.00 0.00 41.17 3.86
4162 7249 2.411535 ACGAGAACAGACGTGTCCA 58.588 52.632 0.00 0.00 41.17 4.02
4167 7254 3.252701 ACATAGAACACGAGAACAGACGT 59.747 43.478 0.00 0.00 43.50 4.34
4168 7255 3.822996 ACATAGAACACGAGAACAGACG 58.177 45.455 0.00 0.00 0.00 4.18
4169 7256 7.168637 TGTTAAACATAGAACACGAGAACAGAC 59.831 37.037 0.00 0.00 30.72 3.51
4170 7257 7.204604 TGTTAAACATAGAACACGAGAACAGA 58.795 34.615 0.00 0.00 30.72 3.41
4171 7258 7.402811 TGTTAAACATAGAACACGAGAACAG 57.597 36.000 0.00 0.00 30.72 3.16
4172 7259 7.439955 ACATGTTAAACATAGAACACGAGAACA 59.560 33.333 0.00 0.00 36.53 3.18
4173 7260 7.793902 ACATGTTAAACATAGAACACGAGAAC 58.206 34.615 0.00 0.00 36.53 3.01
4174 7261 7.956420 ACATGTTAAACATAGAACACGAGAA 57.044 32.000 0.00 0.00 36.53 2.87
4175 7262 7.271868 CGTACATGTTAAACATAGAACACGAGA 59.728 37.037 2.30 0.00 36.53 4.04
4176 7263 7.271868 TCGTACATGTTAAACATAGAACACGAG 59.728 37.037 2.30 0.00 36.53 4.18
4177 7264 7.083230 TCGTACATGTTAAACATAGAACACGA 58.917 34.615 2.30 5.57 36.53 4.35
4178 7265 7.268186 TCGTACATGTTAAACATAGAACACG 57.732 36.000 2.30 2.91 36.53 4.49
4179 7266 9.472995 CATTCGTACATGTTAAACATAGAACAC 57.527 33.333 2.30 0.00 36.53 3.32
4180 7267 8.661257 CCATTCGTACATGTTAAACATAGAACA 58.339 33.333 2.30 0.00 36.53 3.18
4181 7268 7.638683 GCCATTCGTACATGTTAAACATAGAAC 59.361 37.037 2.30 0.00 36.53 3.01
4182 7269 7.201661 GGCCATTCGTACATGTTAAACATAGAA 60.202 37.037 2.30 0.00 36.53 2.10
4183 7270 6.259167 GGCCATTCGTACATGTTAAACATAGA 59.741 38.462 2.30 0.00 36.53 1.98
4184 7271 6.427150 GGCCATTCGTACATGTTAAACATAG 58.573 40.000 2.30 0.00 36.53 2.23
4185 7272 5.297278 GGGCCATTCGTACATGTTAAACATA 59.703 40.000 2.30 0.00 36.53 2.29
4186 7273 4.097286 GGGCCATTCGTACATGTTAAACAT 59.903 41.667 2.30 0.00 39.91 2.71
4187 7274 3.440872 GGGCCATTCGTACATGTTAAACA 59.559 43.478 2.30 0.00 0.00 2.83
4188 7275 3.440872 TGGGCCATTCGTACATGTTAAAC 59.559 43.478 0.00 0.00 0.00 2.01
4189 7276 3.440872 GTGGGCCATTCGTACATGTTAAA 59.559 43.478 10.70 0.00 0.00 1.52
4190 7277 3.011119 GTGGGCCATTCGTACATGTTAA 58.989 45.455 10.70 0.00 0.00 2.01
4191 7278 2.634600 GTGGGCCATTCGTACATGTTA 58.365 47.619 10.70 0.00 0.00 2.41
4192 7279 1.459450 GTGGGCCATTCGTACATGTT 58.541 50.000 10.70 0.00 0.00 2.71
4193 7280 0.393808 GGTGGGCCATTCGTACATGT 60.394 55.000 10.70 2.69 34.09 3.21
4194 7281 1.436195 CGGTGGGCCATTCGTACATG 61.436 60.000 10.70 0.00 34.09 3.21
4195 7282 1.153249 CGGTGGGCCATTCGTACAT 60.153 57.895 10.70 0.00 34.09 2.29
4196 7283 2.266372 CGGTGGGCCATTCGTACA 59.734 61.111 10.70 0.00 34.09 2.90
4197 7284 1.812507 GTCGGTGGGCCATTCGTAC 60.813 63.158 24.32 18.56 34.09 3.67
4198 7285 1.952102 GAGTCGGTGGGCCATTCGTA 61.952 60.000 24.32 13.17 34.09 3.43
4199 7286 3.310860 GAGTCGGTGGGCCATTCGT 62.311 63.158 24.32 11.86 34.09 3.85
4200 7287 2.511600 GAGTCGGTGGGCCATTCG 60.512 66.667 21.11 21.11 34.09 3.34
4201 7288 1.745489 GTGAGTCGGTGGGCCATTC 60.745 63.158 10.70 4.43 34.09 2.67
4202 7289 2.351276 GTGAGTCGGTGGGCCATT 59.649 61.111 10.70 0.00 34.09 3.16
4203 7290 3.717294 GGTGAGTCGGTGGGCCAT 61.717 66.667 10.70 0.00 34.09 4.40
4228 7315 2.125350 CTTCACTCAGCTCCGGGC 60.125 66.667 0.00 3.80 42.19 6.13
4229 7316 1.079543 CACTTCACTCAGCTCCGGG 60.080 63.158 0.00 0.00 0.00 5.73
4230 7317 0.534412 ATCACTTCACTCAGCTCCGG 59.466 55.000 0.00 0.00 0.00 5.14
4231 7318 1.796982 CGATCACTTCACTCAGCTCCG 60.797 57.143 0.00 0.00 0.00 4.63
4232 7319 1.474478 TCGATCACTTCACTCAGCTCC 59.526 52.381 0.00 0.00 0.00 4.70
4233 7320 2.163412 AGTCGATCACTTCACTCAGCTC 59.837 50.000 0.00 0.00 26.56 4.09
4234 7321 2.163412 GAGTCGATCACTTCACTCAGCT 59.837 50.000 0.00 0.00 34.41 4.24
4235 7322 2.163412 AGAGTCGATCACTTCACTCAGC 59.837 50.000 0.00 0.00 36.12 4.26
4236 7323 4.165036 CAAGAGTCGATCACTTCACTCAG 58.835 47.826 0.00 0.00 36.12 3.35
4237 7324 3.057245 CCAAGAGTCGATCACTTCACTCA 60.057 47.826 0.00 0.00 36.12 3.41
4238 7325 3.506810 CCAAGAGTCGATCACTTCACTC 58.493 50.000 0.00 0.00 34.41 3.51
4239 7326 2.232452 CCCAAGAGTCGATCACTTCACT 59.768 50.000 0.00 0.00 34.41 3.41
4240 7327 2.028930 ACCCAAGAGTCGATCACTTCAC 60.029 50.000 0.00 0.00 34.41 3.18
4241 7328 2.029020 CACCCAAGAGTCGATCACTTCA 60.029 50.000 0.00 0.00 34.41 3.02
4242 7329 2.231478 TCACCCAAGAGTCGATCACTTC 59.769 50.000 0.00 0.00 34.41 3.01
4243 7330 2.028930 GTCACCCAAGAGTCGATCACTT 60.029 50.000 0.00 0.00 34.41 3.16
4244 7331 1.546476 GTCACCCAAGAGTCGATCACT 59.454 52.381 0.00 0.00 38.45 3.41
4245 7332 1.546476 AGTCACCCAAGAGTCGATCAC 59.454 52.381 0.00 0.00 0.00 3.06
4246 7333 1.819288 GAGTCACCCAAGAGTCGATCA 59.181 52.381 0.00 0.00 0.00 2.92
4247 7334 1.819288 TGAGTCACCCAAGAGTCGATC 59.181 52.381 0.00 0.00 40.16 3.69
4248 7335 1.821753 CTGAGTCACCCAAGAGTCGAT 59.178 52.381 0.00 0.00 40.16 3.59
4249 7336 1.248486 CTGAGTCACCCAAGAGTCGA 58.752 55.000 0.00 0.00 40.16 4.20
4250 7337 0.244994 CCTGAGTCACCCAAGAGTCG 59.755 60.000 0.00 0.00 40.16 4.18
4251 7338 0.610687 CCCTGAGTCACCCAAGAGTC 59.389 60.000 0.00 0.00 38.24 3.36
4252 7339 0.838122 CCCCTGAGTCACCCAAGAGT 60.838 60.000 0.00 0.00 0.00 3.24
4253 7340 0.838122 ACCCCTGAGTCACCCAAGAG 60.838 60.000 0.00 0.00 0.00 2.85
4254 7341 0.490017 TACCCCTGAGTCACCCAAGA 59.510 55.000 0.00 0.00 0.00 3.02
4255 7342 0.905357 CTACCCCTGAGTCACCCAAG 59.095 60.000 0.00 0.00 0.00 3.61
4256 7343 0.546747 CCTACCCCTGAGTCACCCAA 60.547 60.000 0.00 0.00 0.00 4.12
4257 7344 1.080354 CCTACCCCTGAGTCACCCA 59.920 63.158 0.00 0.00 0.00 4.51
4258 7345 0.337428 TACCTACCCCTGAGTCACCC 59.663 60.000 0.00 0.00 0.00 4.61
4259 7346 1.688627 CCTACCTACCCCTGAGTCACC 60.689 61.905 0.00 0.00 0.00 4.02
4260 7347 1.688627 CCCTACCTACCCCTGAGTCAC 60.689 61.905 0.00 0.00 0.00 3.67
4261 7348 0.635009 CCCTACCTACCCCTGAGTCA 59.365 60.000 0.00 0.00 0.00 3.41
4262 7349 0.635555 ACCCTACCTACCCCTGAGTC 59.364 60.000 0.00 0.00 0.00 3.36
4263 7350 0.635555 GACCCTACCTACCCCTGAGT 59.364 60.000 0.00 0.00 0.00 3.41
4264 7351 0.105607 GGACCCTACCTACCCCTGAG 60.106 65.000 0.00 0.00 0.00 3.35
4265 7352 1.596955 GGGACCCTACCTACCCCTGA 61.597 65.000 2.09 0.00 36.65 3.86
4266 7353 1.074699 GGGACCCTACCTACCCCTG 60.075 68.421 2.09 0.00 36.65 4.45
4267 7354 2.708686 CGGGACCCTACCTACCCCT 61.709 68.421 9.41 0.00 39.20 4.79
4268 7355 2.123121 CGGGACCCTACCTACCCC 60.123 72.222 9.41 0.00 39.20 4.95
4269 7356 1.002145 AACGGGACCCTACCTACCC 59.998 63.158 9.41 0.00 39.02 3.69
4270 7357 1.964608 GCAACGGGACCCTACCTACC 61.965 65.000 9.41 0.00 0.00 3.18
4271 7358 1.519246 GCAACGGGACCCTACCTAC 59.481 63.158 9.41 0.00 0.00 3.18
4272 7359 1.686800 GGCAACGGGACCCTACCTA 60.687 63.158 9.41 0.00 0.00 3.08
4273 7360 3.007323 GGCAACGGGACCCTACCT 61.007 66.667 9.41 0.00 0.00 3.08
4292 7379 3.246112 TTCACGGAGGGGTGGTGG 61.246 66.667 0.00 0.00 38.46 4.61
4293 7380 2.347490 CTTCACGGAGGGGTGGTG 59.653 66.667 0.00 0.00 38.46 4.17
4294 7381 3.637273 GCTTCACGGAGGGGTGGT 61.637 66.667 0.00 0.00 38.46 4.16
4295 7382 3.322466 AGCTTCACGGAGGGGTGG 61.322 66.667 0.00 0.00 38.46 4.61
4296 7383 2.046892 CAGCTTCACGGAGGGGTG 60.047 66.667 0.00 0.00 39.29 4.61
4297 7384 3.322466 CCAGCTTCACGGAGGGGT 61.322 66.667 0.00 0.00 0.00 4.95
4298 7385 4.785453 GCCAGCTTCACGGAGGGG 62.785 72.222 0.00 0.00 0.00 4.79
4300 7387 4.379243 ACGCCAGCTTCACGGAGG 62.379 66.667 4.96 0.00 0.00 4.30
4301 7388 2.811317 GACGCCAGCTTCACGGAG 60.811 66.667 4.96 0.00 0.00 4.63
4302 7389 3.573772 CTGACGCCAGCTTCACGGA 62.574 63.158 4.96 0.00 33.07 4.69
4303 7390 3.114616 CTGACGCCAGCTTCACGG 61.115 66.667 4.96 0.00 33.07 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.