Multiple sequence alignment - TraesCS7A01G038000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G038000 chr7A 100.000 3035 0 0 1 3035 17109828 17112862 0.000000e+00 5605
1 TraesCS7A01G038000 chr7A 89.197 361 30 2 383 742 94207351 94206999 2.780000e-120 442
2 TraesCS7A01G038000 chr7A 88.950 362 30 2 383 742 94170097 94169744 3.590000e-119 438
3 TraesCS7A01G038000 chr7A 95.833 96 3 1 776 871 17118001 17118095 1.460000e-33 154
4 TraesCS7A01G038000 chr7B 95.608 2277 77 11 776 3035 648721063 648718793 0.000000e+00 3629
5 TraesCS7A01G038000 chr7B 90.071 282 13 5 776 1043 648713645 648713365 4.810000e-93 351
6 TraesCS7A01G038000 chr5A 95.518 2276 81 9 776 3035 649442266 649444536 0.000000e+00 3618
7 TraesCS7A01G038000 chr5A 89.567 393 33 2 383 775 642133830 642133446 2.720000e-135 492
8 TraesCS7A01G038000 chr5A 87.277 393 41 3 383 775 34826272 34826655 9.990000e-120 440
9 TraesCS7A01G038000 chr1A 94.508 2276 104 15 776 3035 561407392 561405122 0.000000e+00 3491
10 TraesCS7A01G038000 chr1A 93.064 2278 131 17 776 3035 327713817 327711549 0.000000e+00 3306
11 TraesCS7A01G038000 chr1A 87.023 393 24 9 383 775 560888376 560888741 4.680000e-113 418
12 TraesCS7A01G038000 chr1A 90.747 281 13 3 776 1043 463247306 463247026 2.220000e-96 363
13 TraesCS7A01G038000 chr2A 93.967 2271 116 15 771 3035 12904853 12902598 0.000000e+00 3415
14 TraesCS7A01G038000 chr2A 94.251 1983 90 11 1061 3035 677222422 677220456 0.000000e+00 3009
15 TraesCS7A01G038000 chr2A 95.498 1466 60 5 1571 3035 70125564 70124104 0.000000e+00 2337
16 TraesCS7A01G038000 chr2A 91.919 792 47 12 776 1551 70134931 70134141 0.000000e+00 1092
17 TraesCS7A01G038000 chr2A 92.171 281 9 3 776 1043 677215293 677215013 4.750000e-103 385
18 TraesCS7A01G038000 chr2A 90.169 295 14 4 776 1057 677222796 677222504 1.330000e-98 370
19 TraesCS7A01G038000 chr4A 93.380 2266 103 19 776 3035 125038524 125036300 0.000000e+00 3310
20 TraesCS7A01G038000 chr4A 92.591 2281 110 26 777 3035 621705814 621708057 0.000000e+00 3221
21 TraesCS7A01G038000 chr4A 91.265 332 15 4 776 1093 713599907 713600238 9.990000e-120 440
22 TraesCS7A01G038000 chr4A 91.815 281 10 2 776 1043 621726513 621726793 2.210000e-101 379
23 TraesCS7A01G038000 chr4A 91.459 281 11 3 776 1043 713604139 713604419 1.030000e-99 374
24 TraesCS7A01G038000 chr3D 94.970 1014 46 4 2023 3035 35718570 35719579 0.000000e+00 1585
25 TraesCS7A01G038000 chr3B 90.127 395 28 4 383 775 800979307 800978922 1.260000e-138 503
26 TraesCS7A01G038000 chr5B 89.313 393 34 2 383 775 542234367 542234751 1.260000e-133 486
27 TraesCS7A01G038000 chr5B 89.059 393 34 6 383 775 606924845 606925228 2.120000e-131 479
28 TraesCS7A01G038000 chr6D 88.041 393 19 5 383 775 17945949 17946313 9.990000e-120 440
29 TraesCS7A01G038000 chrUn 90.833 120 6 3 661 775 71527209 71527328 4.050000e-34 156
30 TraesCS7A01G038000 chrUn 90.833 120 6 3 661 775 245548535 245548416 4.050000e-34 156
31 TraesCS7A01G038000 chrUn 90.833 120 6 3 661 775 280861420 280861301 4.050000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G038000 chr7A 17109828 17112862 3034 False 5605.0 5605 100.000 1 3035 1 chr7A.!!$F1 3034
1 TraesCS7A01G038000 chr7B 648718793 648721063 2270 True 3629.0 3629 95.608 776 3035 1 chr7B.!!$R2 2259
2 TraesCS7A01G038000 chr5A 649442266 649444536 2270 False 3618.0 3618 95.518 776 3035 1 chr5A.!!$F2 2259
3 TraesCS7A01G038000 chr1A 561405122 561407392 2270 True 3491.0 3491 94.508 776 3035 1 chr1A.!!$R3 2259
4 TraesCS7A01G038000 chr1A 327711549 327713817 2268 True 3306.0 3306 93.064 776 3035 1 chr1A.!!$R1 2259
5 TraesCS7A01G038000 chr2A 12902598 12904853 2255 True 3415.0 3415 93.967 771 3035 1 chr2A.!!$R1 2264
6 TraesCS7A01G038000 chr2A 70124104 70125564 1460 True 2337.0 2337 95.498 1571 3035 1 chr2A.!!$R2 1464
7 TraesCS7A01G038000 chr2A 677220456 677222796 2340 True 1689.5 3009 92.210 776 3035 2 chr2A.!!$R5 2259
8 TraesCS7A01G038000 chr2A 70134141 70134931 790 True 1092.0 1092 91.919 776 1551 1 chr2A.!!$R3 775
9 TraesCS7A01G038000 chr4A 125036300 125038524 2224 True 3310.0 3310 93.380 776 3035 1 chr4A.!!$R1 2259
10 TraesCS7A01G038000 chr4A 621705814 621708057 2243 False 3221.0 3221 92.591 777 3035 1 chr4A.!!$F1 2258
11 TraesCS7A01G038000 chr4A 713599907 713604419 4512 False 407.0 440 91.362 776 1093 2 chr4A.!!$F3 317
12 TraesCS7A01G038000 chr3D 35718570 35719579 1009 False 1585.0 1585 94.970 2023 3035 1 chr3D.!!$F1 1012

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
479 480 0.033504 TTTGACCTGTCCGACTGAGC 59.966 55.0 6.97 0.01 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 4107 0.317479 GTACTTGGACTCAGCACCGT 59.683 55.0 0.0 0.0 0.0 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.295431 TGTTTGTGTTTCTCTGTGTGAAG 57.705 39.130 0.00 0.00 0.00 3.02
23 24 4.098416 GTTTGTGTTTCTCTGTGTGAAGC 58.902 43.478 0.00 0.00 0.00 3.86
24 25 2.288666 TGTGTTTCTCTGTGTGAAGCC 58.711 47.619 0.00 0.00 0.00 4.35
25 26 1.604278 GTGTTTCTCTGTGTGAAGCCC 59.396 52.381 0.00 0.00 0.00 5.19
26 27 0.868406 GTTTCTCTGTGTGAAGCCCG 59.132 55.000 0.00 0.00 0.00 6.13
27 28 0.468226 TTTCTCTGTGTGAAGCCCGT 59.532 50.000 0.00 0.00 0.00 5.28
28 29 0.468226 TTCTCTGTGTGAAGCCCGTT 59.532 50.000 0.00 0.00 0.00 4.44
29 30 1.334160 TCTCTGTGTGAAGCCCGTTA 58.666 50.000 0.00 0.00 0.00 3.18
30 31 1.689813 TCTCTGTGTGAAGCCCGTTAA 59.310 47.619 0.00 0.00 0.00 2.01
31 32 2.103432 TCTCTGTGTGAAGCCCGTTAAA 59.897 45.455 0.00 0.00 0.00 1.52
32 33 2.215196 TCTGTGTGAAGCCCGTTAAAC 58.785 47.619 0.00 0.00 0.00 2.01
33 34 2.158871 TCTGTGTGAAGCCCGTTAAACT 60.159 45.455 0.00 0.00 0.00 2.66
34 35 2.616842 CTGTGTGAAGCCCGTTAAACTT 59.383 45.455 0.00 0.00 0.00 2.66
35 36 3.806380 TGTGTGAAGCCCGTTAAACTTA 58.194 40.909 0.00 0.00 0.00 2.24
36 37 3.560896 TGTGTGAAGCCCGTTAAACTTAC 59.439 43.478 0.00 0.00 0.00 2.34
37 38 3.058708 GTGTGAAGCCCGTTAAACTTACC 60.059 47.826 0.00 0.00 0.00 2.85
38 39 2.158254 GTGAAGCCCGTTAAACTTACCG 59.842 50.000 0.00 0.00 0.00 4.02
39 40 2.224257 TGAAGCCCGTTAAACTTACCGT 60.224 45.455 0.00 0.00 0.00 4.83
40 41 1.799544 AGCCCGTTAAACTTACCGTG 58.200 50.000 0.00 0.00 0.00 4.94
41 42 1.070601 AGCCCGTTAAACTTACCGTGT 59.929 47.619 0.00 0.00 0.00 4.49
42 43 2.298729 AGCCCGTTAAACTTACCGTGTA 59.701 45.455 0.00 0.00 0.00 2.90
43 44 2.667969 GCCCGTTAAACTTACCGTGTAG 59.332 50.000 0.00 0.00 0.00 2.74
45 46 2.667969 CCGTTAAACTTACCGTGTAGGC 59.332 50.000 0.00 0.00 46.52 3.93
46 47 3.316283 CGTTAAACTTACCGTGTAGGCA 58.684 45.455 0.00 0.00 46.52 4.75
47 48 3.740321 CGTTAAACTTACCGTGTAGGCAA 59.260 43.478 0.00 0.00 46.52 4.52
48 49 4.143263 CGTTAAACTTACCGTGTAGGCAAG 60.143 45.833 0.00 0.00 46.62 4.01
49 50 3.756933 AAACTTACCGTGTAGGCAAGA 57.243 42.857 4.32 0.00 44.53 3.02
50 51 3.756933 AACTTACCGTGTAGGCAAGAA 57.243 42.857 4.32 0.00 44.53 2.52
51 52 3.975168 ACTTACCGTGTAGGCAAGAAT 57.025 42.857 4.32 0.00 44.53 2.40
52 53 4.281898 ACTTACCGTGTAGGCAAGAATT 57.718 40.909 4.32 0.00 44.53 2.17
64 65 0.711670 CAAGAATTGCATGTGCGTGC 59.288 50.000 9.25 9.25 45.83 5.34
65 66 0.388907 AAGAATTGCATGTGCGTGCC 60.389 50.000 13.08 0.00 44.43 5.01
66 67 2.126385 AATTGCATGTGCGTGCCG 60.126 55.556 13.08 0.00 44.43 5.69
67 68 2.801113 GAATTGCATGTGCGTGCCGT 62.801 55.000 13.08 0.23 44.43 5.68
68 69 2.419057 AATTGCATGTGCGTGCCGTT 62.419 50.000 13.08 5.89 44.43 4.44
69 70 2.801113 ATTGCATGTGCGTGCCGTTC 62.801 55.000 13.08 0.00 44.43 3.95
71 72 3.410516 CATGTGCGTGCCGTTCGA 61.411 61.111 0.00 0.00 0.00 3.71
72 73 2.663520 ATGTGCGTGCCGTTCGAA 60.664 55.556 0.00 0.00 0.00 3.71
73 74 2.032634 ATGTGCGTGCCGTTCGAAT 61.033 52.632 0.00 0.00 0.00 3.34
74 75 1.573829 ATGTGCGTGCCGTTCGAATT 61.574 50.000 0.00 0.00 0.00 2.17
75 76 1.792057 GTGCGTGCCGTTCGAATTG 60.792 57.895 0.00 0.00 0.00 2.32
76 77 2.248135 TGCGTGCCGTTCGAATTGT 61.248 52.632 0.00 0.00 0.00 2.71
77 78 1.792057 GCGTGCCGTTCGAATTGTG 60.792 57.895 0.00 0.00 0.00 3.33
78 79 1.792057 CGTGCCGTTCGAATTGTGC 60.792 57.895 0.00 2.68 0.00 4.57
79 80 1.281353 GTGCCGTTCGAATTGTGCA 59.719 52.632 0.00 5.46 0.00 4.57
80 81 0.996727 GTGCCGTTCGAATTGTGCAC 60.997 55.000 20.51 20.51 41.75 4.57
81 82 1.792057 GCCGTTCGAATTGTGCACG 60.792 57.895 13.13 0.00 0.00 5.34
82 83 1.856688 CCGTTCGAATTGTGCACGA 59.143 52.632 9.77 9.77 32.51 4.35
83 84 0.179250 CCGTTCGAATTGTGCACGAG 60.179 55.000 13.31 0.00 37.36 4.18
84 85 0.179250 CGTTCGAATTGTGCACGAGG 60.179 55.000 13.31 4.69 37.36 4.63
85 86 0.452784 GTTCGAATTGTGCACGAGGC 60.453 55.000 13.31 5.95 45.13 4.70
86 87 1.573829 TTCGAATTGTGCACGAGGCC 61.574 55.000 13.31 0.00 43.89 5.19
87 88 2.480555 GAATTGTGCACGAGGCCG 59.519 61.111 13.31 0.00 43.89 6.13
88 89 3.667429 GAATTGTGCACGAGGCCGC 62.667 63.158 13.31 0.00 43.89 6.53
89 90 4.704833 ATTGTGCACGAGGCCGCT 62.705 61.111 13.31 0.00 43.89 5.52
102 103 2.811317 CCGCTGGAGCACGAAGTC 60.811 66.667 0.00 0.00 41.61 3.01
103 104 2.049156 CGCTGGAGCACGAAGTCA 60.049 61.111 0.00 0.00 41.61 3.41
104 105 2.375766 CGCTGGAGCACGAAGTCAC 61.376 63.158 0.00 0.00 41.61 3.67
105 106 2.375766 GCTGGAGCACGAAGTCACG 61.376 63.158 0.00 0.00 41.61 4.35
106 107 2.355837 TGGAGCACGAAGTCACGC 60.356 61.111 0.00 0.00 41.61 5.34
107 108 2.355837 GGAGCACGAAGTCACGCA 60.356 61.111 0.00 0.00 41.61 5.24
108 109 2.375766 GGAGCACGAAGTCACGCAG 61.376 63.158 0.00 0.00 41.61 5.18
109 110 3.004734 GAGCACGAAGTCACGCAGC 62.005 63.158 0.00 0.00 41.61 5.25
110 111 3.038417 GCACGAAGTCACGCAGCT 61.038 61.111 0.00 0.00 41.61 4.24
111 112 2.849007 CACGAAGTCACGCAGCTG 59.151 61.111 10.11 10.11 41.61 4.24
112 113 2.356313 ACGAAGTCACGCAGCTGG 60.356 61.111 17.12 8.27 29.74 4.85
113 114 3.114616 CGAAGTCACGCAGCTGGG 61.115 66.667 27.57 27.57 0.00 4.45
114 115 3.426568 GAAGTCACGCAGCTGGGC 61.427 66.667 28.90 14.03 0.00 5.36
133 134 3.520862 CGCATGGTGGGATGGCAC 61.521 66.667 0.00 0.00 31.21 5.01
145 146 4.542075 TGGCACAACGCTGTAACA 57.458 50.000 0.00 0.00 41.91 2.41
146 147 2.781911 TGGCACAACGCTGTAACAA 58.218 47.368 0.00 0.00 41.91 2.83
147 148 0.660488 TGGCACAACGCTGTAACAAG 59.340 50.000 0.00 0.00 41.91 3.16
148 149 0.660300 GGCACAACGCTGTAACAAGC 60.660 55.000 0.00 0.00 41.91 4.01
149 150 0.660300 GCACAACGCTGTAACAAGCC 60.660 55.000 0.00 0.00 40.23 4.35
150 151 0.660488 CACAACGCTGTAACAAGCCA 59.340 50.000 0.00 0.00 40.23 4.75
151 152 1.266718 CACAACGCTGTAACAAGCCAT 59.733 47.619 0.00 0.00 40.23 4.40
152 153 1.266718 ACAACGCTGTAACAAGCCATG 59.733 47.619 0.00 0.00 40.23 3.66
153 154 0.881118 AACGCTGTAACAAGCCATGG 59.119 50.000 7.63 7.63 40.23 3.66
154 155 1.137404 CGCTGTAACAAGCCATGGC 59.863 57.895 30.12 30.12 40.23 4.40
165 166 1.656441 GCCATGGCGATTTGCTAGG 59.344 57.895 23.48 0.00 45.43 3.02
166 167 0.819259 GCCATGGCGATTTGCTAGGA 60.819 55.000 23.48 0.00 45.43 2.94
167 168 1.901591 CCATGGCGATTTGCTAGGAT 58.098 50.000 0.00 0.00 45.43 3.24
168 169 1.808945 CCATGGCGATTTGCTAGGATC 59.191 52.381 0.00 0.00 45.43 3.36
169 170 2.551721 CCATGGCGATTTGCTAGGATCT 60.552 50.000 0.00 0.00 45.43 2.75
170 171 3.144506 CATGGCGATTTGCTAGGATCTT 58.855 45.455 0.00 0.00 45.43 2.40
171 172 3.281727 TGGCGATTTGCTAGGATCTTT 57.718 42.857 0.00 0.00 45.43 2.52
172 173 3.206150 TGGCGATTTGCTAGGATCTTTC 58.794 45.455 0.00 0.00 45.43 2.62
173 174 3.118261 TGGCGATTTGCTAGGATCTTTCT 60.118 43.478 0.00 0.00 45.43 2.52
174 175 4.100963 TGGCGATTTGCTAGGATCTTTCTA 59.899 41.667 0.00 0.00 45.43 2.10
175 176 5.221722 TGGCGATTTGCTAGGATCTTTCTAT 60.222 40.000 0.00 0.00 45.43 1.98
176 177 5.350091 GGCGATTTGCTAGGATCTTTCTATC 59.650 44.000 0.00 0.00 45.43 2.08
177 178 5.928839 GCGATTTGCTAGGATCTTTCTATCA 59.071 40.000 0.00 0.00 41.73 2.15
178 179 6.090628 GCGATTTGCTAGGATCTTTCTATCAG 59.909 42.308 0.00 0.00 41.73 2.90
179 180 6.090628 CGATTTGCTAGGATCTTTCTATCAGC 59.909 42.308 0.00 0.00 0.00 4.26
180 181 4.511617 TGCTAGGATCTTTCTATCAGCG 57.488 45.455 0.00 0.00 0.00 5.18
181 182 3.256879 TGCTAGGATCTTTCTATCAGCGG 59.743 47.826 0.00 0.00 0.00 5.52
182 183 3.257127 GCTAGGATCTTTCTATCAGCGGT 59.743 47.826 0.00 0.00 0.00 5.68
183 184 4.617298 GCTAGGATCTTTCTATCAGCGGTC 60.617 50.000 0.00 0.00 0.00 4.79
184 185 2.630580 AGGATCTTTCTATCAGCGGTCC 59.369 50.000 0.00 0.00 0.00 4.46
185 186 2.365617 GGATCTTTCTATCAGCGGTCCA 59.634 50.000 0.00 0.00 0.00 4.02
186 187 3.007398 GGATCTTTCTATCAGCGGTCCAT 59.993 47.826 0.00 0.00 0.00 3.41
187 188 4.220821 GGATCTTTCTATCAGCGGTCCATA 59.779 45.833 0.00 0.00 0.00 2.74
188 189 4.585955 TCTTTCTATCAGCGGTCCATAC 57.414 45.455 0.00 0.00 0.00 2.39
189 190 3.958147 TCTTTCTATCAGCGGTCCATACA 59.042 43.478 0.00 0.00 0.00 2.29
190 191 4.588951 TCTTTCTATCAGCGGTCCATACAT 59.411 41.667 0.00 0.00 0.00 2.29
191 192 3.942130 TCTATCAGCGGTCCATACATG 57.058 47.619 0.00 0.00 0.00 3.21
192 193 3.230976 TCTATCAGCGGTCCATACATGT 58.769 45.455 2.69 2.69 0.00 3.21
193 194 4.403734 TCTATCAGCGGTCCATACATGTA 58.596 43.478 8.27 8.27 0.00 2.29
194 195 3.667497 ATCAGCGGTCCATACATGTAG 57.333 47.619 11.91 3.82 0.00 2.74
195 196 2.661718 TCAGCGGTCCATACATGTAGA 58.338 47.619 11.91 1.14 0.00 2.59
196 197 3.028130 TCAGCGGTCCATACATGTAGAA 58.972 45.455 11.91 0.00 0.00 2.10
197 198 3.449377 TCAGCGGTCCATACATGTAGAAA 59.551 43.478 11.91 0.00 0.00 2.52
198 199 4.081365 TCAGCGGTCCATACATGTAGAAAA 60.081 41.667 11.91 0.00 0.00 2.29
199 200 4.034048 CAGCGGTCCATACATGTAGAAAAC 59.966 45.833 11.91 6.78 0.00 2.43
200 201 3.000925 GCGGTCCATACATGTAGAAAACG 59.999 47.826 11.91 13.17 0.00 3.60
201 202 3.000925 CGGTCCATACATGTAGAAAACGC 59.999 47.826 11.91 0.00 0.00 4.84
202 203 3.936453 GGTCCATACATGTAGAAAACGCA 59.064 43.478 11.91 0.00 0.00 5.24
203 204 4.034048 GGTCCATACATGTAGAAAACGCAG 59.966 45.833 11.91 0.00 0.00 5.18
205 206 5.808540 GTCCATACATGTAGAAAACGCAGTA 59.191 40.000 11.91 0.00 45.00 2.74
206 207 6.019801 GTCCATACATGTAGAAAACGCAGTAG 60.020 42.308 11.91 0.00 45.00 2.57
207 208 5.234329 CCATACATGTAGAAAACGCAGTAGG 59.766 44.000 11.91 0.00 45.00 3.18
208 209 3.000727 ACATGTAGAAAACGCAGTAGGC 58.999 45.455 0.00 0.00 45.00 3.93
209 210 2.823924 TGTAGAAAACGCAGTAGGCA 57.176 45.000 0.00 0.00 45.00 4.75
210 211 2.683968 TGTAGAAAACGCAGTAGGCAG 58.316 47.619 0.00 0.00 45.00 4.85
211 212 2.036733 TGTAGAAAACGCAGTAGGCAGT 59.963 45.455 0.00 0.00 45.00 4.40
212 213 2.256117 AGAAAACGCAGTAGGCAGTT 57.744 45.000 0.00 0.00 45.00 3.16
213 214 1.873591 AGAAAACGCAGTAGGCAGTTG 59.126 47.619 0.00 0.00 45.00 3.16
214 215 0.310854 AAAACGCAGTAGGCAGTTGC 59.689 50.000 0.00 0.00 45.00 4.17
217 218 4.152625 GCAGTAGGCAGTTGCGCG 62.153 66.667 0.00 0.00 43.97 6.86
218 219 3.490759 CAGTAGGCAGTTGCGCGG 61.491 66.667 8.83 0.00 43.26 6.46
224 225 4.921847 GCAGTTGCGCGGCACAAA 62.922 61.111 8.83 0.00 38.71 2.83
225 226 2.278466 CAGTTGCGCGGCACAAAA 60.278 55.556 8.83 0.00 38.71 2.44
226 227 1.875813 CAGTTGCGCGGCACAAAAA 60.876 52.632 8.83 0.00 38.71 1.94
227 228 1.067250 AGTTGCGCGGCACAAAAAT 59.933 47.368 8.83 0.00 38.71 1.82
228 229 0.939106 AGTTGCGCGGCACAAAAATC 60.939 50.000 8.83 0.00 38.71 2.17
229 230 1.663074 TTGCGCGGCACAAAAATCC 60.663 52.632 8.83 0.00 38.71 3.01
230 231 2.081425 TTGCGCGGCACAAAAATCCT 62.081 50.000 8.83 0.00 38.71 3.24
231 232 1.372872 GCGCGGCACAAAAATCCTT 60.373 52.632 8.83 0.00 0.00 3.36
232 233 1.344226 GCGCGGCACAAAAATCCTTC 61.344 55.000 8.83 0.00 0.00 3.46
233 234 0.240945 CGCGGCACAAAAATCCTTCT 59.759 50.000 0.00 0.00 0.00 2.85
234 235 1.701704 GCGGCACAAAAATCCTTCTG 58.298 50.000 0.00 0.00 0.00 3.02
235 236 1.000274 GCGGCACAAAAATCCTTCTGT 60.000 47.619 0.00 0.00 0.00 3.41
236 237 2.664916 CGGCACAAAAATCCTTCTGTG 58.335 47.619 0.00 0.00 41.68 3.66
237 238 2.034558 CGGCACAAAAATCCTTCTGTGT 59.965 45.455 3.30 0.00 41.00 3.72
238 239 3.490761 CGGCACAAAAATCCTTCTGTGTT 60.491 43.478 3.30 0.00 41.00 3.32
239 240 3.803778 GGCACAAAAATCCTTCTGTGTTG 59.196 43.478 3.30 0.00 41.00 3.33
240 241 3.803778 GCACAAAAATCCTTCTGTGTTGG 59.196 43.478 3.30 0.00 41.00 3.77
241 242 4.680440 GCACAAAAATCCTTCTGTGTTGGT 60.680 41.667 3.30 0.00 41.00 3.67
242 243 4.805192 CACAAAAATCCTTCTGTGTTGGTG 59.195 41.667 0.00 0.00 35.52 4.17
243 244 4.709397 ACAAAAATCCTTCTGTGTTGGTGA 59.291 37.500 0.00 0.00 0.00 4.02
244 245 5.163519 ACAAAAATCCTTCTGTGTTGGTGAG 60.164 40.000 0.00 0.00 0.00 3.51
245 246 2.191128 ATCCTTCTGTGTTGGTGAGC 57.809 50.000 0.00 0.00 0.00 4.26
246 247 1.131638 TCCTTCTGTGTTGGTGAGCT 58.868 50.000 0.00 0.00 0.00 4.09
247 248 1.202687 TCCTTCTGTGTTGGTGAGCTG 60.203 52.381 0.00 0.00 0.00 4.24
248 249 1.202687 CCTTCTGTGTTGGTGAGCTGA 60.203 52.381 0.00 0.00 0.00 4.26
249 250 2.551721 CCTTCTGTGTTGGTGAGCTGAT 60.552 50.000 0.00 0.00 0.00 2.90
250 251 2.462456 TCTGTGTTGGTGAGCTGATC 57.538 50.000 0.00 0.00 0.00 2.92
251 252 1.073964 CTGTGTTGGTGAGCTGATCG 58.926 55.000 0.00 0.00 0.00 3.69
252 253 0.950555 TGTGTTGGTGAGCTGATCGC 60.951 55.000 0.00 0.00 37.73 4.58
257 258 3.791539 GTGAGCTGATCGCCAGTG 58.208 61.111 0.00 0.00 44.71 3.66
258 259 1.079543 GTGAGCTGATCGCCAGTGT 60.080 57.895 0.00 0.00 44.71 3.55
259 260 1.079612 TGAGCTGATCGCCAGTGTG 60.080 57.895 0.00 0.00 44.71 3.82
260 261 1.079543 GAGCTGATCGCCAGTGTGT 60.080 57.895 0.00 0.00 44.71 3.72
261 262 0.173481 GAGCTGATCGCCAGTGTGTA 59.827 55.000 0.00 0.00 44.71 2.90
262 263 0.826715 AGCTGATCGCCAGTGTGTAT 59.173 50.000 6.02 0.00 44.71 2.29
263 264 0.933097 GCTGATCGCCAGTGTGTATG 59.067 55.000 6.53 0.00 44.71 2.39
264 265 1.740380 GCTGATCGCCAGTGTGTATGT 60.740 52.381 6.53 0.00 44.71 2.29
265 266 2.196749 CTGATCGCCAGTGTGTATGTC 58.803 52.381 0.00 0.00 38.10 3.06
266 267 1.824852 TGATCGCCAGTGTGTATGTCT 59.175 47.619 0.00 0.00 0.00 3.41
267 268 2.233676 TGATCGCCAGTGTGTATGTCTT 59.766 45.455 0.00 0.00 0.00 3.01
268 269 2.831685 TCGCCAGTGTGTATGTCTTT 57.168 45.000 0.00 0.00 0.00 2.52
269 270 2.412870 TCGCCAGTGTGTATGTCTTTG 58.587 47.619 0.00 0.00 0.00 2.77
270 271 2.143122 CGCCAGTGTGTATGTCTTTGT 58.857 47.619 0.00 0.00 0.00 2.83
271 272 2.096268 CGCCAGTGTGTATGTCTTTGTG 60.096 50.000 0.00 0.00 0.00 3.33
272 273 2.878406 GCCAGTGTGTATGTCTTTGTGT 59.122 45.455 0.00 0.00 0.00 3.72
273 274 3.315191 GCCAGTGTGTATGTCTTTGTGTT 59.685 43.478 0.00 0.00 0.00 3.32
274 275 4.554723 GCCAGTGTGTATGTCTTTGTGTTC 60.555 45.833 0.00 0.00 0.00 3.18
275 276 4.318760 CCAGTGTGTATGTCTTTGTGTTCG 60.319 45.833 0.00 0.00 0.00 3.95
276 277 4.270084 CAGTGTGTATGTCTTTGTGTTCGT 59.730 41.667 0.00 0.00 0.00 3.85
277 278 4.270084 AGTGTGTATGTCTTTGTGTTCGTG 59.730 41.667 0.00 0.00 0.00 4.35
278 279 4.269123 GTGTGTATGTCTTTGTGTTCGTGA 59.731 41.667 0.00 0.00 0.00 4.35
279 280 4.506288 TGTGTATGTCTTTGTGTTCGTGAG 59.494 41.667 0.00 0.00 0.00 3.51
280 281 3.493129 TGTATGTCTTTGTGTTCGTGAGC 59.507 43.478 0.00 0.00 0.00 4.26
281 282 0.927537 TGTCTTTGTGTTCGTGAGCG 59.072 50.000 0.00 0.00 39.92 5.03
282 283 1.205657 GTCTTTGTGTTCGTGAGCGA 58.794 50.000 0.00 0.00 46.36 4.93
291 292 3.886044 TCGTGAGCGAGTTGTTGAT 57.114 47.368 0.00 0.00 42.81 2.57
292 293 1.698165 TCGTGAGCGAGTTGTTGATC 58.302 50.000 0.00 0.00 42.81 2.92
293 294 0.363512 CGTGAGCGAGTTGTTGATCG 59.636 55.000 0.00 0.00 41.33 3.69
294 295 1.698165 GTGAGCGAGTTGTTGATCGA 58.302 50.000 0.00 0.00 41.40 3.59
295 296 1.387084 GTGAGCGAGTTGTTGATCGAC 59.613 52.381 6.11 6.11 41.40 4.20
296 297 1.000717 TGAGCGAGTTGTTGATCGACA 60.001 47.619 11.98 11.98 41.40 4.35
297 298 2.058798 GAGCGAGTTGTTGATCGACAA 58.941 47.619 22.25 22.25 41.40 3.18
309 310 3.886044 TCGACAACGACATGCTTCT 57.114 47.368 0.00 0.00 43.81 2.85
310 311 1.418373 TCGACAACGACATGCTTCTG 58.582 50.000 0.00 0.00 43.81 3.02
311 312 0.179240 CGACAACGACATGCTTCTGC 60.179 55.000 0.00 0.00 42.66 4.26
312 313 1.151668 GACAACGACATGCTTCTGCT 58.848 50.000 0.00 0.00 40.48 4.24
313 314 0.870393 ACAACGACATGCTTCTGCTG 59.130 50.000 0.00 0.00 40.48 4.41
314 315 0.453950 CAACGACATGCTTCTGCTGC 60.454 55.000 0.00 0.00 40.48 5.25
315 316 0.604780 AACGACATGCTTCTGCTGCT 60.605 50.000 0.00 0.00 40.48 4.24
316 317 1.296755 ACGACATGCTTCTGCTGCTG 61.297 55.000 0.00 0.00 40.48 4.41
317 318 1.136984 GACATGCTTCTGCTGCTGC 59.863 57.895 8.89 8.89 40.48 5.25
318 319 1.303398 ACATGCTTCTGCTGCTGCT 60.303 52.632 17.00 0.00 40.48 4.24
319 320 0.035725 ACATGCTTCTGCTGCTGCTA 60.036 50.000 17.00 2.17 40.48 3.49
320 321 1.092348 CATGCTTCTGCTGCTGCTAA 58.908 50.000 17.00 9.91 40.48 3.09
321 322 1.064208 CATGCTTCTGCTGCTGCTAAG 59.936 52.381 17.00 18.56 40.48 2.18
322 323 0.035881 TGCTTCTGCTGCTGCTAAGT 59.964 50.000 22.44 0.00 40.48 2.24
323 324 1.163554 GCTTCTGCTGCTGCTAAGTT 58.836 50.000 22.44 0.00 40.48 2.66
324 325 1.130186 GCTTCTGCTGCTGCTAAGTTC 59.870 52.381 22.44 10.67 40.48 3.01
325 326 2.697654 CTTCTGCTGCTGCTAAGTTCT 58.302 47.619 17.00 0.00 40.48 3.01
326 327 3.854666 CTTCTGCTGCTGCTAAGTTCTA 58.145 45.455 17.00 0.00 40.48 2.10
327 328 3.961480 TCTGCTGCTGCTAAGTTCTAA 57.039 42.857 17.00 0.00 40.48 2.10
328 329 3.589988 TCTGCTGCTGCTAAGTTCTAAC 58.410 45.455 17.00 0.00 40.48 2.34
329 330 2.675348 CTGCTGCTGCTAAGTTCTAACC 59.325 50.000 17.00 0.00 40.48 2.85
330 331 2.303022 TGCTGCTGCTAAGTTCTAACCT 59.697 45.455 17.00 0.00 40.48 3.50
331 332 2.933260 GCTGCTGCTAAGTTCTAACCTC 59.067 50.000 8.53 0.00 36.03 3.85
332 333 3.526534 CTGCTGCTAAGTTCTAACCTCC 58.473 50.000 0.00 0.00 0.00 4.30
333 334 2.903784 TGCTGCTAAGTTCTAACCTCCA 59.096 45.455 0.00 0.00 0.00 3.86
334 335 3.263261 GCTGCTAAGTTCTAACCTCCAC 58.737 50.000 0.00 0.00 0.00 4.02
335 336 3.863041 CTGCTAAGTTCTAACCTCCACC 58.137 50.000 0.00 0.00 0.00 4.61
336 337 2.232941 TGCTAAGTTCTAACCTCCACCG 59.767 50.000 0.00 0.00 0.00 4.94
337 338 2.233186 GCTAAGTTCTAACCTCCACCGT 59.767 50.000 0.00 0.00 0.00 4.83
338 339 3.675502 GCTAAGTTCTAACCTCCACCGTC 60.676 52.174 0.00 0.00 0.00 4.79
339 340 0.886563 AGTTCTAACCTCCACCGTCG 59.113 55.000 0.00 0.00 0.00 5.12
340 341 0.600057 GTTCTAACCTCCACCGTCGT 59.400 55.000 0.00 0.00 0.00 4.34
341 342 1.812571 GTTCTAACCTCCACCGTCGTA 59.187 52.381 0.00 0.00 0.00 3.43
342 343 2.198827 TCTAACCTCCACCGTCGTAA 57.801 50.000 0.00 0.00 0.00 3.18
343 344 1.812571 TCTAACCTCCACCGTCGTAAC 59.187 52.381 0.00 0.00 0.00 2.50
344 345 0.887933 TAACCTCCACCGTCGTAACC 59.112 55.000 0.00 0.00 0.00 2.85
345 346 0.829182 AACCTCCACCGTCGTAACCT 60.829 55.000 0.00 0.00 0.00 3.50
346 347 1.214589 CCTCCACCGTCGTAACCTG 59.785 63.158 0.00 0.00 0.00 4.00
347 348 1.214589 CTCCACCGTCGTAACCTGG 59.785 63.158 0.00 0.00 0.00 4.45
348 349 2.221906 CTCCACCGTCGTAACCTGGG 62.222 65.000 0.00 0.00 0.00 4.45
349 350 2.433664 CACCGTCGTAACCTGGGC 60.434 66.667 0.00 0.00 0.00 5.36
350 351 4.060038 ACCGTCGTAACCTGGGCG 62.060 66.667 0.00 0.00 0.00 6.13
351 352 4.060038 CCGTCGTAACCTGGGCGT 62.060 66.667 0.00 0.00 0.00 5.68
352 353 2.807895 CGTCGTAACCTGGGCGTG 60.808 66.667 0.00 0.00 0.00 5.34
353 354 2.341176 GTCGTAACCTGGGCGTGT 59.659 61.111 0.00 0.00 0.00 4.49
354 355 1.301165 GTCGTAACCTGGGCGTGTT 60.301 57.895 0.00 0.00 0.00 3.32
355 356 0.881600 GTCGTAACCTGGGCGTGTTT 60.882 55.000 0.00 0.00 0.00 2.83
356 357 0.600782 TCGTAACCTGGGCGTGTTTC 60.601 55.000 0.00 0.00 0.00 2.78
357 358 0.881159 CGTAACCTGGGCGTGTTTCA 60.881 55.000 0.00 0.00 0.00 2.69
358 359 0.872388 GTAACCTGGGCGTGTTTCAG 59.128 55.000 0.00 0.00 0.00 3.02
360 361 3.365265 CCTGGGCGTGTTTCAGGC 61.365 66.667 5.97 5.97 43.37 4.85
361 362 2.281761 CTGGGCGTGTTTCAGGCT 60.282 61.111 12.75 0.00 43.57 4.58
362 363 2.594303 TGGGCGTGTTTCAGGCTG 60.594 61.111 8.58 8.58 43.57 4.85
363 364 2.281484 GGGCGTGTTTCAGGCTGA 60.281 61.111 14.43 14.43 43.57 4.26
364 365 1.896660 GGGCGTGTTTCAGGCTGAA 60.897 57.895 25.38 25.38 43.57 3.02
365 366 1.282875 GGCGTGTTTCAGGCTGAAC 59.717 57.895 28.58 21.98 43.57 3.18
366 367 1.444119 GGCGTGTTTCAGGCTGAACA 61.444 55.000 28.58 24.00 43.57 3.18
367 368 0.040958 GCGTGTTTCAGGCTGAACAG 60.041 55.000 28.58 19.38 41.29 3.16
389 390 2.351276 AGCGGGCTTTTCGGTCAT 59.649 55.556 0.00 0.00 32.68 3.06
390 391 2.040544 AGCGGGCTTTTCGGTCATG 61.041 57.895 0.00 0.00 32.68 3.07
391 392 3.051392 GCGGGCTTTTCGGTCATGG 62.051 63.158 0.00 0.00 0.00 3.66
392 393 2.885113 GGGCTTTTCGGTCATGGC 59.115 61.111 0.00 0.00 0.00 4.40
393 394 1.678970 GGGCTTTTCGGTCATGGCT 60.679 57.895 0.00 0.00 0.00 4.75
394 395 1.657751 GGGCTTTTCGGTCATGGCTC 61.658 60.000 0.00 0.00 0.00 4.70
395 396 1.425428 GCTTTTCGGTCATGGCTCG 59.575 57.895 0.00 0.00 0.00 5.03
396 397 1.425428 CTTTTCGGTCATGGCTCGC 59.575 57.895 0.00 0.00 0.00 5.03
397 398 1.003839 TTTTCGGTCATGGCTCGCT 60.004 52.632 0.00 0.00 0.00 4.93
398 399 1.298157 TTTTCGGTCATGGCTCGCTG 61.298 55.000 0.00 0.00 0.00 5.18
399 400 4.819761 TCGGTCATGGCTCGCTGC 62.820 66.667 0.00 0.00 41.94 5.25
401 402 3.200593 GGTCATGGCTCGCTGCAG 61.201 66.667 10.11 10.11 45.15 4.41
402 403 2.125391 GTCATGGCTCGCTGCAGA 60.125 61.111 20.43 0.00 45.15 4.26
403 404 1.742880 GTCATGGCTCGCTGCAGAA 60.743 57.895 20.43 3.11 45.15 3.02
404 405 1.003476 TCATGGCTCGCTGCAGAAA 60.003 52.632 20.43 2.69 45.15 2.52
405 406 0.393402 TCATGGCTCGCTGCAGAAAT 60.393 50.000 20.43 0.00 45.15 2.17
406 407 0.454600 CATGGCTCGCTGCAGAAATT 59.545 50.000 20.43 0.00 45.15 1.82
407 408 0.454600 ATGGCTCGCTGCAGAAATTG 59.545 50.000 20.43 3.07 45.15 2.32
408 409 1.138247 GGCTCGCTGCAGAAATTGG 59.862 57.895 20.43 1.58 45.15 3.16
409 410 1.515736 GCTCGCTGCAGAAATTGGC 60.516 57.895 20.43 8.25 42.31 4.52
410 411 1.930908 GCTCGCTGCAGAAATTGGCT 61.931 55.000 20.43 0.00 42.31 4.75
411 412 0.179171 CTCGCTGCAGAAATTGGCTG 60.179 55.000 20.43 4.62 36.47 4.85
412 413 1.153901 CGCTGCAGAAATTGGCTGG 60.154 57.895 20.43 0.00 34.00 4.85
413 414 1.870055 CGCTGCAGAAATTGGCTGGT 61.870 55.000 20.43 0.00 34.00 4.00
414 415 0.108945 GCTGCAGAAATTGGCTGGTC 60.109 55.000 20.43 0.00 34.00 4.02
415 416 0.529378 CTGCAGAAATTGGCTGGTCC 59.471 55.000 8.42 0.00 34.00 4.46
416 417 0.178967 TGCAGAAATTGGCTGGTCCA 60.179 50.000 9.76 0.00 44.85 4.02
431 432 3.150767 TGGTCCAGTTACCAAATTTCGG 58.849 45.455 0.00 5.44 46.55 4.30
432 433 2.094906 GGTCCAGTTACCAAATTTCGGC 60.095 50.000 6.58 0.00 39.50 5.54
433 434 2.094906 GTCCAGTTACCAAATTTCGGCC 60.095 50.000 0.00 0.00 0.00 6.13
434 435 1.203758 CCAGTTACCAAATTTCGGCCC 59.796 52.381 0.00 0.00 0.00 5.80
435 436 1.135517 CAGTTACCAAATTTCGGCCCG 60.136 52.381 0.00 0.00 0.00 6.13
436 437 1.166989 GTTACCAAATTTCGGCCCGA 58.833 50.000 0.00 0.00 0.00 5.14
437 438 1.540707 GTTACCAAATTTCGGCCCGAA 59.459 47.619 15.93 15.93 44.28 4.30
438 439 1.455248 TACCAAATTTCGGCCCGAAG 58.545 50.000 19.18 9.53 46.43 3.79
439 440 0.538746 ACCAAATTTCGGCCCGAAGT 60.539 50.000 19.18 13.83 46.43 3.01
440 441 0.601057 CCAAATTTCGGCCCGAAGTT 59.399 50.000 19.44 19.44 46.43 2.66
442 443 2.324860 CAAATTTCGGCCCGAAGTTTC 58.675 47.619 29.33 0.00 46.85 2.78
443 444 0.885879 AATTTCGGCCCGAAGTTTCC 59.114 50.000 19.44 0.00 46.43 3.13
444 445 0.037734 ATTTCGGCCCGAAGTTTCCT 59.962 50.000 19.18 0.00 46.43 3.36
445 446 0.604511 TTTCGGCCCGAAGTTTCCTC 60.605 55.000 19.18 0.00 46.43 3.71
446 447 2.775032 TTCGGCCCGAAGTTTCCTCG 62.775 60.000 15.93 0.00 41.05 4.63
447 448 2.436115 GGCCCGAAGTTTCCTCGG 60.436 66.667 4.28 4.28 45.65 4.63
448 449 2.346365 GCCCGAAGTTTCCTCGGT 59.654 61.111 10.13 0.00 44.71 4.69
449 450 1.740664 GCCCGAAGTTTCCTCGGTC 60.741 63.158 10.13 0.00 44.71 4.79
450 451 1.079336 CCCGAAGTTTCCTCGGTCC 60.079 63.158 10.13 0.00 44.71 4.46
451 452 1.445582 CCGAAGTTTCCTCGGTCCG 60.446 63.158 4.39 4.39 41.62 4.79
452 453 1.445582 CGAAGTTTCCTCGGTCCGG 60.446 63.158 12.29 0.00 0.00 5.14
453 454 1.670015 GAAGTTTCCTCGGTCCGGT 59.330 57.895 12.29 0.00 0.00 5.28
454 455 0.389556 GAAGTTTCCTCGGTCCGGTC 60.390 60.000 12.29 0.00 0.00 4.79
455 456 1.824224 AAGTTTCCTCGGTCCGGTCC 61.824 60.000 12.29 7.79 0.00 4.46
476 477 1.784525 GTCTTTGACCTGTCCGACTG 58.215 55.000 0.00 0.00 0.00 3.51
477 478 1.340248 GTCTTTGACCTGTCCGACTGA 59.660 52.381 6.97 0.00 0.00 3.41
478 479 1.613925 TCTTTGACCTGTCCGACTGAG 59.386 52.381 6.97 0.77 0.00 3.35
479 480 0.033504 TTTGACCTGTCCGACTGAGC 59.966 55.000 6.97 0.01 0.00 4.26
480 481 2.142357 TTGACCTGTCCGACTGAGCG 62.142 60.000 6.97 0.00 0.00 5.03
488 489 2.202492 CGACTGAGCGGACCGAAG 60.202 66.667 20.50 13.77 0.00 3.79
489 490 2.507324 GACTGAGCGGACCGAAGC 60.507 66.667 20.50 6.08 0.00 3.86
491 492 2.507992 CTGAGCGGACCGAAGCTG 60.508 66.667 20.50 5.85 44.69 4.24
492 493 4.742201 TGAGCGGACCGAAGCTGC 62.742 66.667 20.50 0.00 44.69 5.25
493 494 4.742201 GAGCGGACCGAAGCTGCA 62.742 66.667 20.50 0.00 44.69 4.41
494 495 4.749310 AGCGGACCGAAGCTGCAG 62.749 66.667 20.50 10.11 42.82 4.41
498 499 4.704833 GACCGAAGCTGCAGGCCA 62.705 66.667 17.12 0.00 43.05 5.36
499 500 3.984193 GACCGAAGCTGCAGGCCAT 62.984 63.158 17.12 0.00 43.05 4.40
500 501 2.753043 CCGAAGCTGCAGGCCATT 60.753 61.111 17.12 0.00 43.05 3.16
501 502 2.345760 CCGAAGCTGCAGGCCATTT 61.346 57.895 17.12 0.00 43.05 2.32
502 503 1.588082 CGAAGCTGCAGGCCATTTT 59.412 52.632 17.12 0.00 43.05 1.82
503 504 0.037975 CGAAGCTGCAGGCCATTTTT 60.038 50.000 17.12 0.00 43.05 1.94
504 505 1.718396 GAAGCTGCAGGCCATTTTTC 58.282 50.000 17.12 3.97 43.05 2.29
505 506 0.037975 AAGCTGCAGGCCATTTTTCG 60.038 50.000 17.12 0.00 43.05 3.46
506 507 1.181098 AGCTGCAGGCCATTTTTCGT 61.181 50.000 17.12 0.00 43.05 3.85
507 508 0.733909 GCTGCAGGCCATTTTTCGTC 60.734 55.000 17.12 0.00 34.27 4.20
508 509 0.454957 CTGCAGGCCATTTTTCGTCG 60.455 55.000 5.01 0.00 0.00 5.12
509 510 1.154035 GCAGGCCATTTTTCGTCGG 60.154 57.895 5.01 0.00 0.00 4.79
510 511 1.154035 CAGGCCATTTTTCGTCGGC 60.154 57.895 5.01 0.00 44.10 5.54
511 512 2.202427 GGCCATTTTTCGTCGGCG 60.202 61.111 1.15 1.15 45.85 6.46
512 513 2.874315 GCCATTTTTCGTCGGCGC 60.874 61.111 3.52 0.00 38.14 6.53
513 514 2.573167 CCATTTTTCGTCGGCGCG 60.573 61.111 3.52 15.59 38.14 6.86
514 515 2.573167 CATTTTTCGTCGGCGCGG 60.573 61.111 19.95 8.94 38.14 6.46
515 516 4.454717 ATTTTTCGTCGGCGCGGC 62.455 61.111 24.49 24.49 38.14 6.53
533 534 4.457496 CACCGGCGACATCCTGCT 62.457 66.667 9.30 0.00 0.00 4.24
534 535 4.148825 ACCGGCGACATCCTGCTC 62.149 66.667 9.30 0.00 0.00 4.26
535 536 3.842923 CCGGCGACATCCTGCTCT 61.843 66.667 9.30 0.00 0.00 4.09
536 537 2.584418 CGGCGACATCCTGCTCTG 60.584 66.667 0.00 0.00 0.00 3.35
537 538 2.202987 GGCGACATCCTGCTCTGG 60.203 66.667 0.00 0.00 0.00 3.86
538 539 2.581354 GCGACATCCTGCTCTGGT 59.419 61.111 0.00 0.00 0.00 4.00
539 540 1.520342 GCGACATCCTGCTCTGGTC 60.520 63.158 0.00 0.00 0.00 4.02
540 541 1.226802 CGACATCCTGCTCTGGTCG 60.227 63.158 0.00 0.00 44.13 4.79
541 542 1.893786 GACATCCTGCTCTGGTCGT 59.106 57.895 0.00 0.00 0.00 4.34
542 543 0.459237 GACATCCTGCTCTGGTCGTG 60.459 60.000 0.00 0.00 0.00 4.35
543 544 0.900182 ACATCCTGCTCTGGTCGTGA 60.900 55.000 0.00 0.00 0.00 4.35
544 545 0.179116 CATCCTGCTCTGGTCGTGAG 60.179 60.000 0.00 0.00 34.87 3.51
545 546 0.323816 ATCCTGCTCTGGTCGTGAGA 60.324 55.000 0.00 0.00 33.68 3.27
546 547 0.323816 TCCTGCTCTGGTCGTGAGAT 60.324 55.000 0.00 0.00 45.19 2.75
547 548 0.102120 CCTGCTCTGGTCGTGAGATC 59.898 60.000 0.00 0.00 45.19 2.75
548 549 0.102120 CTGCTCTGGTCGTGAGATCC 59.898 60.000 0.00 0.00 41.73 3.36
549 550 1.064946 GCTCTGGTCGTGAGATCCG 59.935 63.158 0.00 0.00 41.73 4.18
550 551 1.064946 CTCTGGTCGTGAGATCCGC 59.935 63.158 0.00 0.00 41.73 5.54
557 558 4.819761 GTGAGATCCGCGCAGGCA 62.820 66.667 8.75 0.24 40.77 4.75
558 559 4.819761 TGAGATCCGCGCAGGCAC 62.820 66.667 8.75 7.23 40.77 5.01
559 560 4.521062 GAGATCCGCGCAGGCACT 62.521 66.667 8.75 11.67 40.77 4.40
560 561 3.138930 GAGATCCGCGCAGGCACTA 62.139 63.158 8.75 0.00 40.77 2.74
561 562 2.962253 GATCCGCGCAGGCACTAC 60.962 66.667 8.75 0.00 40.77 2.73
567 568 4.111016 CGCAGGCACTACGGACGA 62.111 66.667 0.00 0.00 42.28 4.20
568 569 2.202623 GCAGGCACTACGGACGAG 60.203 66.667 0.00 0.00 36.02 4.18
569 570 2.202623 CAGGCACTACGGACGAGC 60.203 66.667 0.00 0.00 36.02 5.03
570 571 2.675423 AGGCACTACGGACGAGCA 60.675 61.111 0.00 0.00 36.02 4.26
571 572 2.506438 GGCACTACGGACGAGCAC 60.506 66.667 0.00 0.00 0.00 4.40
572 573 2.874780 GCACTACGGACGAGCACG 60.875 66.667 0.76 0.76 45.75 5.34
573 574 2.874780 CACTACGGACGAGCACGC 60.875 66.667 2.62 0.00 43.96 5.34
574 575 4.112341 ACTACGGACGAGCACGCC 62.112 66.667 2.62 5.22 43.96 5.68
575 576 4.849329 CTACGGACGAGCACGCCC 62.849 72.222 2.62 0.00 43.96 6.13
596 597 4.821589 CGCCCTGCCGACCTTCTC 62.822 72.222 0.00 0.00 0.00 2.87
597 598 4.475135 GCCCTGCCGACCTTCTCC 62.475 72.222 0.00 0.00 0.00 3.71
598 599 3.787001 CCCTGCCGACCTTCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
599 600 4.148825 CCTGCCGACCTTCTCCCG 62.149 72.222 0.00 0.00 0.00 5.14
600 601 4.821589 CTGCCGACCTTCTCCCGC 62.822 72.222 0.00 0.00 0.00 6.13
602 603 4.516195 GCCGACCTTCTCCCGCTC 62.516 72.222 0.00 0.00 0.00 5.03
603 604 3.839432 CCGACCTTCTCCCGCTCC 61.839 72.222 0.00 0.00 0.00 4.70
604 605 2.756283 CGACCTTCTCCCGCTCCT 60.756 66.667 0.00 0.00 0.00 3.69
605 606 2.896443 GACCTTCTCCCGCTCCTG 59.104 66.667 0.00 0.00 0.00 3.86
606 607 3.378399 GACCTTCTCCCGCTCCTGC 62.378 68.421 0.00 0.00 0.00 4.85
617 618 2.494677 GCTCCTGCGGTAGAAGAGA 58.505 57.895 0.00 0.00 0.00 3.10
618 619 0.818296 GCTCCTGCGGTAGAAGAGAA 59.182 55.000 0.00 0.00 0.00 2.87
619 620 1.470112 GCTCCTGCGGTAGAAGAGAAC 60.470 57.143 0.00 0.00 0.00 3.01
620 621 1.819288 CTCCTGCGGTAGAAGAGAACA 59.181 52.381 0.00 0.00 0.00 3.18
621 622 1.819288 TCCTGCGGTAGAAGAGAACAG 59.181 52.381 0.00 0.00 0.00 3.16
622 623 1.819288 CCTGCGGTAGAAGAGAACAGA 59.181 52.381 0.00 0.00 0.00 3.41
623 624 2.159310 CCTGCGGTAGAAGAGAACAGAG 60.159 54.545 0.00 0.00 0.00 3.35
624 625 2.750166 CTGCGGTAGAAGAGAACAGAGA 59.250 50.000 0.00 0.00 0.00 3.10
625 626 3.154710 TGCGGTAGAAGAGAACAGAGAA 58.845 45.455 0.00 0.00 0.00 2.87
626 627 3.764434 TGCGGTAGAAGAGAACAGAGAAT 59.236 43.478 0.00 0.00 0.00 2.40
627 628 4.948004 TGCGGTAGAAGAGAACAGAGAATA 59.052 41.667 0.00 0.00 0.00 1.75
628 629 5.066634 TGCGGTAGAAGAGAACAGAGAATAG 59.933 44.000 0.00 0.00 0.00 1.73
629 630 5.297278 GCGGTAGAAGAGAACAGAGAATAGA 59.703 44.000 0.00 0.00 0.00 1.98
630 631 6.183360 GCGGTAGAAGAGAACAGAGAATAGAA 60.183 42.308 0.00 0.00 0.00 2.10
631 632 7.628794 GCGGTAGAAGAGAACAGAGAATAGAAA 60.629 40.741 0.00 0.00 0.00 2.52
632 633 7.913297 CGGTAGAAGAGAACAGAGAATAGAAAG 59.087 40.741 0.00 0.00 0.00 2.62
633 634 8.962679 GGTAGAAGAGAACAGAGAATAGAAAGA 58.037 37.037 0.00 0.00 0.00 2.52
636 637 9.927668 AGAAGAGAACAGAGAATAGAAAGAAAG 57.072 33.333 0.00 0.00 0.00 2.62
637 638 9.921637 GAAGAGAACAGAGAATAGAAAGAAAGA 57.078 33.333 0.00 0.00 0.00 2.52
638 639 9.927668 AAGAGAACAGAGAATAGAAAGAAAGAG 57.072 33.333 0.00 0.00 0.00 2.85
639 640 8.034804 AGAGAACAGAGAATAGAAAGAAAGAGC 58.965 37.037 0.00 0.00 0.00 4.09
640 641 6.811170 AGAACAGAGAATAGAAAGAAAGAGCG 59.189 38.462 0.00 0.00 0.00 5.03
641 642 5.415221 ACAGAGAATAGAAAGAAAGAGCGG 58.585 41.667 0.00 0.00 0.00 5.52
642 643 5.046950 ACAGAGAATAGAAAGAAAGAGCGGT 60.047 40.000 0.00 0.00 0.00 5.68
643 644 5.518487 CAGAGAATAGAAAGAAAGAGCGGTC 59.482 44.000 6.48 6.48 0.00 4.79
644 645 5.186021 AGAGAATAGAAAGAAAGAGCGGTCA 59.814 40.000 18.15 0.00 0.00 4.02
645 646 5.172205 AGAATAGAAAGAAAGAGCGGTCAC 58.828 41.667 18.15 7.80 0.00 3.67
646 647 1.784525 AGAAAGAAAGAGCGGTCACG 58.215 50.000 18.15 0.00 44.63 4.35
662 663 3.967886 ACGCCCGTGATTATCTGAG 57.032 52.632 0.00 0.00 0.00 3.35
663 664 1.399714 ACGCCCGTGATTATCTGAGA 58.600 50.000 0.00 0.00 0.00 3.27
664 665 1.964223 ACGCCCGTGATTATCTGAGAT 59.036 47.619 0.00 0.00 0.00 2.75
665 666 3.154710 ACGCCCGTGATTATCTGAGATA 58.845 45.455 0.00 0.00 0.00 1.98
666 667 3.191581 ACGCCCGTGATTATCTGAGATAG 59.808 47.826 2.03 0.00 0.00 2.08
667 668 3.440522 CGCCCGTGATTATCTGAGATAGA 59.559 47.826 2.03 0.00 40.37 1.98
668 669 4.673061 CGCCCGTGATTATCTGAGATAGAC 60.673 50.000 2.03 2.34 38.49 2.59
669 670 4.461081 GCCCGTGATTATCTGAGATAGACT 59.539 45.833 2.03 0.00 38.49 3.24
670 671 5.047660 GCCCGTGATTATCTGAGATAGACTT 60.048 44.000 2.03 0.00 38.49 3.01
671 672 6.385843 CCCGTGATTATCTGAGATAGACTTG 58.614 44.000 2.03 0.00 38.49 3.16
672 673 6.207614 CCCGTGATTATCTGAGATAGACTTGA 59.792 42.308 2.03 0.00 38.49 3.02
673 674 7.093988 CCCGTGATTATCTGAGATAGACTTGAT 60.094 40.741 2.03 0.00 38.49 2.57
674 675 8.303156 CCGTGATTATCTGAGATAGACTTGATT 58.697 37.037 2.03 0.00 38.49 2.57
675 676 9.689976 CGTGATTATCTGAGATAGACTTGATTT 57.310 33.333 2.03 0.00 38.49 2.17
681 682 8.729805 ATCTGAGATAGACTTGATTTTTGTCC 57.270 34.615 0.00 0.00 38.49 4.02
682 683 7.911651 TCTGAGATAGACTTGATTTTTGTCCT 58.088 34.615 0.00 0.00 0.00 3.85
683 684 8.378565 TCTGAGATAGACTTGATTTTTGTCCTT 58.621 33.333 0.00 0.00 0.00 3.36
684 685 8.924511 TGAGATAGACTTGATTTTTGTCCTTT 57.075 30.769 0.00 0.00 0.00 3.11
690 691 8.519799 AGACTTGATTTTTGTCCTTTACTTCA 57.480 30.769 0.00 0.00 0.00 3.02
691 692 8.624776 AGACTTGATTTTTGTCCTTTACTTCAG 58.375 33.333 0.00 0.00 0.00 3.02
692 693 8.293699 ACTTGATTTTTGTCCTTTACTTCAGT 57.706 30.769 0.00 0.00 0.00 3.41
693 694 8.406297 ACTTGATTTTTGTCCTTTACTTCAGTC 58.594 33.333 0.00 0.00 0.00 3.51
694 695 7.873719 TGATTTTTGTCCTTTACTTCAGTCA 57.126 32.000 0.00 0.00 0.00 3.41
695 696 8.287439 TGATTTTTGTCCTTTACTTCAGTCAA 57.713 30.769 0.00 0.00 0.00 3.18
696 697 8.405531 TGATTTTTGTCCTTTACTTCAGTCAAG 58.594 33.333 0.00 0.00 38.21 3.02
698 699 8.795842 TTTTTGTCCTTTACTTCAGTCAAGTA 57.204 30.769 1.25 0.00 44.13 2.24
699 700 7.781548 TTTGTCCTTTACTTCAGTCAAGTAC 57.218 36.000 0.00 0.00 45.64 2.73
700 701 6.474140 TGTCCTTTACTTCAGTCAAGTACA 57.526 37.500 0.00 0.00 45.64 2.90
701 702 6.513180 TGTCCTTTACTTCAGTCAAGTACAG 58.487 40.000 0.00 0.00 45.64 2.74
702 703 6.322969 TGTCCTTTACTTCAGTCAAGTACAGA 59.677 38.462 1.98 0.00 45.64 3.41
703 704 7.147794 TGTCCTTTACTTCAGTCAAGTACAGAA 60.148 37.037 1.98 0.00 45.64 3.02
710 711 6.716934 TTCAGTCAAGTACAGAAGAAGACT 57.283 37.500 0.00 0.00 35.44 3.24
711 712 6.320494 TCAGTCAAGTACAGAAGAAGACTC 57.680 41.667 0.00 0.00 33.01 3.36
712 713 5.828328 TCAGTCAAGTACAGAAGAAGACTCA 59.172 40.000 0.00 0.00 33.01 3.41
713 714 6.016693 TCAGTCAAGTACAGAAGAAGACTCAG 60.017 42.308 0.00 0.00 33.01 3.35
714 715 5.242838 AGTCAAGTACAGAAGAAGACTCAGG 59.757 44.000 0.00 0.00 29.60 3.86
715 716 5.010213 GTCAAGTACAGAAGAAGACTCAGGT 59.990 44.000 0.00 0.00 0.00 4.00
716 717 5.241949 TCAAGTACAGAAGAAGACTCAGGTC 59.758 44.000 0.00 0.00 42.41 3.85
717 718 4.730966 AGTACAGAAGAAGACTCAGGTCA 58.269 43.478 0.00 0.00 44.36 4.02
718 719 4.521256 AGTACAGAAGAAGACTCAGGTCAC 59.479 45.833 0.00 0.00 44.36 3.67
719 720 2.294791 ACAGAAGAAGACTCAGGTCACG 59.705 50.000 0.00 0.00 44.36 4.35
720 721 1.271102 AGAAGAAGACTCAGGTCACGC 59.729 52.381 0.00 0.00 44.36 5.34
721 722 0.318762 AAGAAGACTCAGGTCACGCC 59.681 55.000 0.00 0.00 44.36 5.68
722 723 1.079750 GAAGACTCAGGTCACGCCC 60.080 63.158 0.00 0.00 44.36 6.13
723 724 2.820767 GAAGACTCAGGTCACGCCCG 62.821 65.000 0.00 0.00 44.36 6.13
724 725 3.681835 GACTCAGGTCACGCCCGT 61.682 66.667 0.00 0.00 41.75 5.28
725 726 3.222354 GACTCAGGTCACGCCCGTT 62.222 63.158 0.00 0.00 41.75 4.44
726 727 1.870055 GACTCAGGTCACGCCCGTTA 61.870 60.000 0.00 0.00 41.75 3.18
727 728 1.255667 ACTCAGGTCACGCCCGTTAT 61.256 55.000 0.00 0.00 38.26 1.89
728 729 0.108329 CTCAGGTCACGCCCGTTATT 60.108 55.000 0.00 0.00 38.26 1.40
729 730 1.135527 CTCAGGTCACGCCCGTTATTA 59.864 52.381 0.00 0.00 38.26 0.98
730 731 1.758280 TCAGGTCACGCCCGTTATTAT 59.242 47.619 0.00 0.00 38.26 1.28
731 732 2.132762 CAGGTCACGCCCGTTATTATC 58.867 52.381 0.00 0.00 38.26 1.75
732 733 2.037144 AGGTCACGCCCGTTATTATCT 58.963 47.619 0.00 0.00 38.26 1.98
733 734 2.132762 GGTCACGCCCGTTATTATCTG 58.867 52.381 0.00 0.00 0.00 2.90
734 735 2.223876 GGTCACGCCCGTTATTATCTGA 60.224 50.000 0.00 0.00 0.00 3.27
735 736 3.050619 GTCACGCCCGTTATTATCTGAG 58.949 50.000 0.00 0.00 0.00 3.35
736 737 2.691526 TCACGCCCGTTATTATCTGAGT 59.308 45.455 0.00 0.00 0.00 3.41
737 738 3.050619 CACGCCCGTTATTATCTGAGTC 58.949 50.000 0.00 0.00 0.00 3.36
738 739 2.691526 ACGCCCGTTATTATCTGAGTCA 59.308 45.455 0.00 0.00 0.00 3.41
739 740 3.050619 CGCCCGTTATTATCTGAGTCAC 58.949 50.000 0.00 0.00 0.00 3.67
740 741 3.490249 CGCCCGTTATTATCTGAGTCACA 60.490 47.826 0.00 0.00 0.00 3.58
741 742 3.802685 GCCCGTTATTATCTGAGTCACAC 59.197 47.826 0.00 0.00 0.00 3.82
742 743 4.679639 GCCCGTTATTATCTGAGTCACACA 60.680 45.833 0.00 0.00 0.00 3.72
743 744 5.601662 CCCGTTATTATCTGAGTCACACAT 58.398 41.667 0.00 0.00 0.00 3.21
744 745 5.463392 CCCGTTATTATCTGAGTCACACATG 59.537 44.000 0.00 0.00 0.00 3.21
745 746 5.463392 CCGTTATTATCTGAGTCACACATGG 59.537 44.000 0.00 0.00 0.00 3.66
746 747 6.273071 CGTTATTATCTGAGTCACACATGGA 58.727 40.000 0.00 0.00 0.00 3.41
747 748 6.199154 CGTTATTATCTGAGTCACACATGGAC 59.801 42.308 0.00 0.00 35.50 4.02
748 749 5.682234 ATTATCTGAGTCACACATGGACA 57.318 39.130 0.00 0.00 37.74 4.02
749 750 5.682234 TTATCTGAGTCACACATGGACAT 57.318 39.130 0.00 0.00 37.74 3.06
750 751 3.323751 TCTGAGTCACACATGGACATG 57.676 47.619 10.57 10.57 44.15 3.21
751 752 1.736126 CTGAGTCACACATGGACATGC 59.264 52.381 11.96 0.00 42.39 4.06
752 753 1.072015 TGAGTCACACATGGACATGCA 59.928 47.619 11.96 0.00 42.39 3.96
753 754 1.736126 GAGTCACACATGGACATGCAG 59.264 52.381 11.96 7.80 42.39 4.41
754 755 1.072806 AGTCACACATGGACATGCAGT 59.927 47.619 11.96 8.39 42.39 4.40
755 756 1.881973 GTCACACATGGACATGCAGTT 59.118 47.619 11.96 0.00 42.39 3.16
756 757 2.294233 GTCACACATGGACATGCAGTTT 59.706 45.455 11.96 0.00 42.39 2.66
757 758 2.553602 TCACACATGGACATGCAGTTTC 59.446 45.455 11.96 0.00 42.39 2.78
758 759 1.888512 ACACATGGACATGCAGTTTCC 59.111 47.619 11.96 0.00 42.39 3.13
759 760 1.203052 CACATGGACATGCAGTTTCCC 59.797 52.381 11.96 0.00 42.39 3.97
760 761 0.819582 CATGGACATGCAGTTTCCCC 59.180 55.000 8.22 0.00 31.39 4.81
761 762 0.409092 ATGGACATGCAGTTTCCCCA 59.591 50.000 8.22 2.81 0.00 4.96
762 763 0.251297 TGGACATGCAGTTTCCCCAG 60.251 55.000 8.22 0.00 0.00 4.45
763 764 0.967380 GGACATGCAGTTTCCCCAGG 60.967 60.000 0.00 0.00 0.00 4.45
764 765 0.967380 GACATGCAGTTTCCCCAGGG 60.967 60.000 0.00 0.00 0.00 4.45
765 766 1.683365 CATGCAGTTTCCCCAGGGG 60.683 63.158 20.55 20.55 46.11 4.79
766 767 3.607084 ATGCAGTTTCCCCAGGGGC 62.607 63.158 21.90 7.50 43.94 5.80
767 768 4.299796 GCAGTTTCCCCAGGGGCA 62.300 66.667 21.90 6.07 43.94 5.36
768 769 2.525592 CAGTTTCCCCAGGGGCAA 59.474 61.111 21.90 13.71 43.94 4.52
769 770 1.607467 CAGTTTCCCCAGGGGCAAG 60.607 63.158 21.90 0.00 43.94 4.01
774 775 0.045623 TTCCCCAGGGGCAAGAGATA 59.954 55.000 21.90 0.00 43.94 1.98
866 878 3.980646 ACTCTCTAACTGCTATGAGCG 57.019 47.619 0.00 0.00 46.26 5.03
1008 1032 9.986157 ATATATAGTGCCCAATCAATGAGAATT 57.014 29.630 0.00 0.00 0.00 2.17
1235 2084 1.301716 GACTTGGCGCAAGGAGTGA 60.302 57.895 10.83 0.00 44.81 3.41
1498 2347 2.512515 GAGGTCCATCAGCGCCAC 60.513 66.667 2.29 0.00 0.00 5.01
1653 2502 1.961277 CGAACTGCCGGAGCACTTT 60.961 57.895 5.05 0.00 46.52 2.66
1788 3130 1.501604 GAGGAGATAGAGGACCAGGGT 59.498 57.143 0.00 0.00 0.00 4.34
1791 3133 2.359355 GGAGATAGAGGACCAGGGTTCA 60.359 54.545 0.00 0.00 0.00 3.18
1820 3162 1.676968 CACCACCTTCATCACCGGA 59.323 57.895 9.46 0.00 0.00 5.14
1856 3198 3.394836 GGCACCGCCTCTTCCTCT 61.395 66.667 0.00 0.00 46.69 3.69
2071 4107 3.760035 GGGAGAGCCGACGAGCAA 61.760 66.667 10.28 0.00 34.23 3.91
2138 4174 0.966920 GAGACGTGGGGAAACTCTCA 59.033 55.000 0.00 0.00 30.83 3.27
2279 4318 4.240096 GTTTTCAACAGAGAATGGCCATG 58.760 43.478 21.63 10.78 0.00 3.66
2283 4322 2.684881 CAACAGAGAATGGCCATGGTAC 59.315 50.000 21.63 11.39 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.379394 GCTTCACACAGAGAAACACAAACA 60.379 41.667 0.00 0.00 0.00 2.83
1 2 4.098416 GCTTCACACAGAGAAACACAAAC 58.902 43.478 0.00 0.00 0.00 2.93
2 3 3.128589 GGCTTCACACAGAGAAACACAAA 59.871 43.478 0.00 0.00 0.00 2.83
3 4 2.682856 GGCTTCACACAGAGAAACACAA 59.317 45.455 0.00 0.00 0.00 3.33
4 5 2.288666 GGCTTCACACAGAGAAACACA 58.711 47.619 0.00 0.00 0.00 3.72
5 6 1.604278 GGGCTTCACACAGAGAAACAC 59.396 52.381 0.00 0.00 0.00 3.32
6 7 1.810031 CGGGCTTCACACAGAGAAACA 60.810 52.381 0.00 0.00 0.00 2.83
7 8 0.868406 CGGGCTTCACACAGAGAAAC 59.132 55.000 0.00 0.00 0.00 2.78
8 9 0.468226 ACGGGCTTCACACAGAGAAA 59.532 50.000 0.00 0.00 0.00 2.52
9 10 0.468226 AACGGGCTTCACACAGAGAA 59.532 50.000 0.00 0.00 0.00 2.87
10 11 1.334160 TAACGGGCTTCACACAGAGA 58.666 50.000 0.00 0.00 0.00 3.10
11 12 2.163818 TTAACGGGCTTCACACAGAG 57.836 50.000 0.00 0.00 0.00 3.35
12 13 2.158871 AGTTTAACGGGCTTCACACAGA 60.159 45.455 0.00 0.00 0.00 3.41
13 14 2.218603 AGTTTAACGGGCTTCACACAG 58.781 47.619 0.00 0.00 0.00 3.66
14 15 2.335316 AGTTTAACGGGCTTCACACA 57.665 45.000 0.00 0.00 0.00 3.72
15 16 3.058708 GGTAAGTTTAACGGGCTTCACAC 60.059 47.826 0.00 0.00 0.00 3.82
16 17 3.140623 GGTAAGTTTAACGGGCTTCACA 58.859 45.455 0.00 0.00 0.00 3.58
17 18 2.158254 CGGTAAGTTTAACGGGCTTCAC 59.842 50.000 1.50 0.00 40.02 3.18
18 19 2.415776 CGGTAAGTTTAACGGGCTTCA 58.584 47.619 1.50 0.00 40.02 3.02
25 26 4.143263 CTTGCCTACACGGTAAGTTTAACG 60.143 45.833 7.72 7.72 46.74 3.18
26 27 5.273523 CTTGCCTACACGGTAAGTTTAAC 57.726 43.478 1.32 0.00 46.74 2.01
45 46 0.711670 GCACGCACATGCAATTCTTG 59.288 50.000 4.49 0.00 45.39 3.02
46 47 3.111536 GCACGCACATGCAATTCTT 57.888 47.368 4.49 0.00 45.39 2.52
47 48 4.874534 GCACGCACATGCAATTCT 57.125 50.000 4.49 0.00 45.39 2.40
61 62 0.996727 GTGCACAATTCGAACGGCAC 60.997 55.000 21.46 21.46 43.78 5.01
62 63 1.281353 GTGCACAATTCGAACGGCA 59.719 52.632 13.17 5.35 0.00 5.69
63 64 1.792057 CGTGCACAATTCGAACGGC 60.792 57.895 18.64 2.46 0.00 5.68
64 65 0.179250 CTCGTGCACAATTCGAACGG 60.179 55.000 18.64 0.00 35.08 4.44
65 66 0.179250 CCTCGTGCACAATTCGAACG 60.179 55.000 18.64 0.00 33.32 3.95
66 67 0.452784 GCCTCGTGCACAATTCGAAC 60.453 55.000 18.64 0.00 40.77 3.95
67 68 1.573829 GGCCTCGTGCACAATTCGAA 61.574 55.000 18.64 0.00 43.89 3.71
68 69 2.032634 GGCCTCGTGCACAATTCGA 61.033 57.895 18.64 6.93 43.89 3.71
69 70 2.480555 GGCCTCGTGCACAATTCG 59.519 61.111 18.64 1.94 43.89 3.34
70 71 2.480555 CGGCCTCGTGCACAATTC 59.519 61.111 18.64 2.61 43.89 2.17
71 72 3.737172 GCGGCCTCGTGCACAATT 61.737 61.111 18.64 0.00 43.89 2.32
72 73 4.704833 AGCGGCCTCGTGCACAAT 62.705 61.111 18.64 0.00 43.89 2.71
85 86 2.811317 GACTTCGTGCTCCAGCGG 60.811 66.667 0.00 0.00 45.83 5.52
86 87 2.049156 TGACTTCGTGCTCCAGCG 60.049 61.111 0.00 0.00 45.83 5.18
87 88 2.375766 CGTGACTTCGTGCTCCAGC 61.376 63.158 0.00 0.00 42.50 4.85
88 89 2.375766 GCGTGACTTCGTGCTCCAG 61.376 63.158 0.00 0.00 0.00 3.86
89 90 2.355837 GCGTGACTTCGTGCTCCA 60.356 61.111 0.00 0.00 0.00 3.86
90 91 2.355837 TGCGTGACTTCGTGCTCC 60.356 61.111 0.00 0.00 0.00 4.70
91 92 3.004734 GCTGCGTGACTTCGTGCTC 62.005 63.158 0.00 0.00 33.05 4.26
92 93 3.038417 GCTGCGTGACTTCGTGCT 61.038 61.111 0.00 0.00 33.05 4.40
93 94 3.038417 AGCTGCGTGACTTCGTGC 61.038 61.111 0.00 0.00 34.71 5.34
94 95 2.661566 CCAGCTGCGTGACTTCGTG 61.662 63.158 8.66 0.00 0.00 4.35
95 96 2.356313 CCAGCTGCGTGACTTCGT 60.356 61.111 8.66 0.00 0.00 3.85
96 97 3.114616 CCCAGCTGCGTGACTTCG 61.115 66.667 8.66 0.00 0.00 3.79
97 98 3.426568 GCCCAGCTGCGTGACTTC 61.427 66.667 8.66 0.00 0.00 3.01
116 117 3.520862 GTGCCATCCCACCATGCG 61.521 66.667 0.00 0.00 0.00 4.73
117 118 1.983481 TTGTGCCATCCCACCATGC 60.983 57.895 0.00 0.00 34.85 4.06
118 119 1.892338 GTTGTGCCATCCCACCATG 59.108 57.895 0.00 0.00 34.85 3.66
119 120 1.678635 CGTTGTGCCATCCCACCAT 60.679 57.895 0.00 0.00 34.85 3.55
120 121 2.282110 CGTTGTGCCATCCCACCA 60.282 61.111 0.00 0.00 34.85 4.17
121 122 3.747976 GCGTTGTGCCATCCCACC 61.748 66.667 0.00 0.00 37.76 4.61
130 131 0.660300 GGCTTGTTACAGCGTTGTGC 60.660 55.000 15.78 9.06 41.12 4.57
131 132 0.660488 TGGCTTGTTACAGCGTTGTG 59.340 50.000 15.78 0.00 41.12 3.33
132 133 1.266718 CATGGCTTGTTACAGCGTTGT 59.733 47.619 10.52 10.52 41.12 3.32
133 134 1.401409 CCATGGCTTGTTACAGCGTTG 60.401 52.381 0.00 0.00 41.12 4.10
134 135 0.881118 CCATGGCTTGTTACAGCGTT 59.119 50.000 0.00 0.00 41.12 4.84
135 136 1.586154 GCCATGGCTTGTTACAGCGT 61.586 55.000 29.98 0.00 41.12 5.07
136 137 1.137404 GCCATGGCTTGTTACAGCG 59.863 57.895 29.98 0.00 41.12 5.18
137 138 1.137404 CGCCATGGCTTGTTACAGC 59.863 57.895 33.07 4.15 39.32 4.40
138 139 1.382522 ATCGCCATGGCTTGTTACAG 58.617 50.000 33.07 15.79 39.32 2.74
139 140 1.832883 AATCGCCATGGCTTGTTACA 58.167 45.000 33.07 9.29 39.32 2.41
140 141 2.529151 CAAATCGCCATGGCTTGTTAC 58.471 47.619 33.07 4.09 39.32 2.50
141 142 1.135141 GCAAATCGCCATGGCTTGTTA 60.135 47.619 33.07 14.20 39.32 2.41
142 143 0.390209 GCAAATCGCCATGGCTTGTT 60.390 50.000 33.07 21.13 39.32 2.83
143 144 1.216178 GCAAATCGCCATGGCTTGT 59.784 52.632 33.07 16.54 39.32 3.16
144 145 0.740149 TAGCAAATCGCCATGGCTTG 59.260 50.000 33.07 28.76 44.04 4.01
145 146 1.027357 CTAGCAAATCGCCATGGCTT 58.973 50.000 33.07 19.68 44.04 4.35
146 147 0.820891 CCTAGCAAATCGCCATGGCT 60.821 55.000 33.07 14.30 44.04 4.75
147 148 0.819259 TCCTAGCAAATCGCCATGGC 60.819 55.000 27.67 27.67 44.04 4.40
148 149 1.808945 GATCCTAGCAAATCGCCATGG 59.191 52.381 7.63 7.63 44.04 3.66
149 150 2.775890 AGATCCTAGCAAATCGCCATG 58.224 47.619 0.00 0.00 44.04 3.66
150 151 3.498774 AAGATCCTAGCAAATCGCCAT 57.501 42.857 0.00 0.00 44.04 4.40
151 152 3.118261 AGAAAGATCCTAGCAAATCGCCA 60.118 43.478 0.00 0.00 44.04 5.69
152 153 3.471680 AGAAAGATCCTAGCAAATCGCC 58.528 45.455 0.00 0.00 44.04 5.54
153 154 5.928839 TGATAGAAAGATCCTAGCAAATCGC 59.071 40.000 0.00 0.00 42.91 4.58
154 155 6.090628 GCTGATAGAAAGATCCTAGCAAATCG 59.909 42.308 0.00 0.00 32.92 3.34
155 156 6.090628 CGCTGATAGAAAGATCCTAGCAAATC 59.909 42.308 0.00 0.00 32.92 2.17
156 157 5.931146 CGCTGATAGAAAGATCCTAGCAAAT 59.069 40.000 0.00 0.00 32.92 2.32
157 158 5.292765 CGCTGATAGAAAGATCCTAGCAAA 58.707 41.667 0.00 0.00 32.92 3.68
158 159 4.262207 CCGCTGATAGAAAGATCCTAGCAA 60.262 45.833 0.00 0.00 32.92 3.91
159 160 3.256879 CCGCTGATAGAAAGATCCTAGCA 59.743 47.826 0.00 0.00 32.43 3.49
160 161 3.257127 ACCGCTGATAGAAAGATCCTAGC 59.743 47.826 0.00 0.00 0.00 3.42
161 162 4.082463 GGACCGCTGATAGAAAGATCCTAG 60.082 50.000 0.00 0.00 0.00 3.02
162 163 3.827302 GGACCGCTGATAGAAAGATCCTA 59.173 47.826 0.00 0.00 0.00 2.94
163 164 2.630580 GGACCGCTGATAGAAAGATCCT 59.369 50.000 0.00 0.00 0.00 3.24
164 165 2.365617 TGGACCGCTGATAGAAAGATCC 59.634 50.000 0.00 0.00 0.00 3.36
165 166 3.735237 TGGACCGCTGATAGAAAGATC 57.265 47.619 0.00 0.00 0.00 2.75
166 167 4.588951 TGTATGGACCGCTGATAGAAAGAT 59.411 41.667 0.00 0.00 0.00 2.40
167 168 3.958147 TGTATGGACCGCTGATAGAAAGA 59.042 43.478 0.00 0.00 0.00 2.52
168 169 4.322080 TGTATGGACCGCTGATAGAAAG 57.678 45.455 0.00 0.00 0.00 2.62
169 170 4.100963 ACATGTATGGACCGCTGATAGAAA 59.899 41.667 0.00 0.00 0.00 2.52
170 171 3.641436 ACATGTATGGACCGCTGATAGAA 59.359 43.478 0.00 0.00 0.00 2.10
171 172 3.230976 ACATGTATGGACCGCTGATAGA 58.769 45.455 0.00 0.00 0.00 1.98
172 173 3.667497 ACATGTATGGACCGCTGATAG 57.333 47.619 0.00 0.00 0.00 2.08
173 174 4.403734 TCTACATGTATGGACCGCTGATA 58.596 43.478 5.91 0.00 0.00 2.15
174 175 3.230976 TCTACATGTATGGACCGCTGAT 58.769 45.455 5.91 0.00 0.00 2.90
175 176 2.661718 TCTACATGTATGGACCGCTGA 58.338 47.619 5.91 0.00 0.00 4.26
176 177 3.452755 TTCTACATGTATGGACCGCTG 57.547 47.619 5.91 0.00 0.00 5.18
177 178 4.189231 GTTTTCTACATGTATGGACCGCT 58.811 43.478 5.91 0.00 0.00 5.52
178 179 3.000925 CGTTTTCTACATGTATGGACCGC 59.999 47.826 5.91 0.00 0.00 5.68
179 180 3.000925 GCGTTTTCTACATGTATGGACCG 59.999 47.826 5.91 7.84 0.00 4.79
180 181 3.936453 TGCGTTTTCTACATGTATGGACC 59.064 43.478 5.91 0.00 0.00 4.46
181 182 4.630069 ACTGCGTTTTCTACATGTATGGAC 59.370 41.667 5.91 2.87 0.00 4.02
182 183 4.827692 ACTGCGTTTTCTACATGTATGGA 58.172 39.130 5.91 0.00 0.00 3.41
183 184 5.234329 CCTACTGCGTTTTCTACATGTATGG 59.766 44.000 5.91 0.00 0.00 2.74
184 185 5.276868 GCCTACTGCGTTTTCTACATGTATG 60.277 44.000 5.91 1.20 0.00 2.39
185 186 4.809426 GCCTACTGCGTTTTCTACATGTAT 59.191 41.667 5.91 0.00 0.00 2.29
186 187 4.178540 GCCTACTGCGTTTTCTACATGTA 58.821 43.478 5.25 5.25 0.00 2.29
187 188 3.000727 GCCTACTGCGTTTTCTACATGT 58.999 45.455 2.69 2.69 0.00 3.21
188 189 3.000041 TGCCTACTGCGTTTTCTACATG 59.000 45.455 0.00 0.00 45.60 3.21
189 190 3.262420 CTGCCTACTGCGTTTTCTACAT 58.738 45.455 0.00 0.00 45.60 2.29
190 191 2.036733 ACTGCCTACTGCGTTTTCTACA 59.963 45.455 0.00 0.00 45.60 2.74
191 192 2.685100 ACTGCCTACTGCGTTTTCTAC 58.315 47.619 0.00 0.00 45.60 2.59
192 193 3.064207 CAACTGCCTACTGCGTTTTCTA 58.936 45.455 0.00 0.00 45.60 2.10
193 194 1.873591 CAACTGCCTACTGCGTTTTCT 59.126 47.619 0.00 0.00 45.60 2.52
194 195 1.663161 GCAACTGCCTACTGCGTTTTC 60.663 52.381 0.00 0.00 45.60 2.29
195 196 0.310854 GCAACTGCCTACTGCGTTTT 59.689 50.000 0.00 0.00 45.60 2.43
196 197 1.949257 GCAACTGCCTACTGCGTTT 59.051 52.632 0.00 0.00 45.60 3.60
197 198 3.655481 GCAACTGCCTACTGCGTT 58.345 55.556 0.00 0.00 45.60 4.84
200 201 4.152625 CGCGCAACTGCCTACTGC 62.153 66.667 8.75 0.00 41.77 4.40
201 202 3.490759 CCGCGCAACTGCCTACTG 61.491 66.667 8.75 0.00 37.91 2.74
207 208 4.921847 TTTGTGCCGCGCAACTGC 62.922 61.111 18.73 4.57 41.47 4.40
208 209 1.214373 ATTTTTGTGCCGCGCAACTG 61.214 50.000 18.73 0.00 41.47 3.16
209 210 0.939106 GATTTTTGTGCCGCGCAACT 60.939 50.000 18.73 7.02 41.47 3.16
210 211 1.486801 GATTTTTGTGCCGCGCAAC 59.513 52.632 18.73 4.17 41.47 4.17
211 212 1.663074 GGATTTTTGTGCCGCGCAA 60.663 52.632 15.30 15.30 41.47 4.85
212 213 2.049618 GGATTTTTGTGCCGCGCA 60.050 55.556 8.75 1.51 35.60 6.09
213 214 1.344226 GAAGGATTTTTGTGCCGCGC 61.344 55.000 0.00 0.00 0.00 6.86
214 215 0.240945 AGAAGGATTTTTGTGCCGCG 59.759 50.000 0.00 0.00 0.00 6.46
215 216 1.000274 ACAGAAGGATTTTTGTGCCGC 60.000 47.619 0.00 0.00 0.00 6.53
216 217 2.034558 ACACAGAAGGATTTTTGTGCCG 59.965 45.455 9.89 0.00 43.38 5.69
217 218 3.733443 ACACAGAAGGATTTTTGTGCC 57.267 42.857 9.89 0.00 43.38 5.01
218 219 3.803778 CCAACACAGAAGGATTTTTGTGC 59.196 43.478 9.89 0.00 43.38 4.57
219 220 4.805192 CACCAACACAGAAGGATTTTTGTG 59.195 41.667 8.77 8.77 44.39 3.33
220 221 4.709397 TCACCAACACAGAAGGATTTTTGT 59.291 37.500 0.00 0.00 0.00 2.83
221 222 5.261209 TCACCAACACAGAAGGATTTTTG 57.739 39.130 0.00 0.00 0.00 2.44
222 223 4.202151 GCTCACCAACACAGAAGGATTTTT 60.202 41.667 0.00 0.00 0.00 1.94
223 224 3.319122 GCTCACCAACACAGAAGGATTTT 59.681 43.478 0.00 0.00 0.00 1.82
224 225 2.887152 GCTCACCAACACAGAAGGATTT 59.113 45.455 0.00 0.00 0.00 2.17
225 226 2.107204 AGCTCACCAACACAGAAGGATT 59.893 45.455 0.00 0.00 0.00 3.01
226 227 1.701847 AGCTCACCAACACAGAAGGAT 59.298 47.619 0.00 0.00 0.00 3.24
227 228 1.131638 AGCTCACCAACACAGAAGGA 58.868 50.000 0.00 0.00 0.00 3.36
228 229 1.202687 TCAGCTCACCAACACAGAAGG 60.203 52.381 0.00 0.00 0.00 3.46
229 230 2.245159 TCAGCTCACCAACACAGAAG 57.755 50.000 0.00 0.00 0.00 2.85
230 231 2.771089 GATCAGCTCACCAACACAGAA 58.229 47.619 0.00 0.00 0.00 3.02
231 232 1.337167 CGATCAGCTCACCAACACAGA 60.337 52.381 0.00 0.00 0.00 3.41
232 233 1.073964 CGATCAGCTCACCAACACAG 58.926 55.000 0.00 0.00 0.00 3.66
233 234 0.950555 GCGATCAGCTCACCAACACA 60.951 55.000 0.00 0.00 44.04 3.72
234 235 1.790387 GCGATCAGCTCACCAACAC 59.210 57.895 0.00 0.00 44.04 3.32
235 236 4.284123 GCGATCAGCTCACCAACA 57.716 55.556 0.00 0.00 44.04 3.33
246 247 1.824852 AGACATACACACTGGCGATCA 59.175 47.619 0.00 0.00 0.00 2.92
247 248 2.586258 AGACATACACACTGGCGATC 57.414 50.000 0.00 0.00 0.00 3.69
248 249 3.002791 CAAAGACATACACACTGGCGAT 58.997 45.455 0.00 0.00 0.00 4.58
249 250 2.224185 ACAAAGACATACACACTGGCGA 60.224 45.455 0.00 0.00 0.00 5.54
250 251 2.096268 CACAAAGACATACACACTGGCG 60.096 50.000 0.00 0.00 0.00 5.69
251 252 2.878406 ACACAAAGACATACACACTGGC 59.122 45.455 0.00 0.00 0.00 4.85
252 253 4.318760 CGAACACAAAGACATACACACTGG 60.319 45.833 0.00 0.00 0.00 4.00
253 254 4.270084 ACGAACACAAAGACATACACACTG 59.730 41.667 0.00 0.00 0.00 3.66
254 255 4.270084 CACGAACACAAAGACATACACACT 59.730 41.667 0.00 0.00 0.00 3.55
255 256 4.269123 TCACGAACACAAAGACATACACAC 59.731 41.667 0.00 0.00 0.00 3.82
256 257 4.434520 TCACGAACACAAAGACATACACA 58.565 39.130 0.00 0.00 0.00 3.72
257 258 4.608445 GCTCACGAACACAAAGACATACAC 60.608 45.833 0.00 0.00 0.00 2.90
258 259 3.493129 GCTCACGAACACAAAGACATACA 59.507 43.478 0.00 0.00 0.00 2.29
259 260 3.421826 CGCTCACGAACACAAAGACATAC 60.422 47.826 0.00 0.00 43.93 2.39
260 261 2.729360 CGCTCACGAACACAAAGACATA 59.271 45.455 0.00 0.00 43.93 2.29
261 262 1.526887 CGCTCACGAACACAAAGACAT 59.473 47.619 0.00 0.00 43.93 3.06
262 263 0.927537 CGCTCACGAACACAAAGACA 59.072 50.000 0.00 0.00 43.93 3.41
263 264 3.710233 CGCTCACGAACACAAAGAC 57.290 52.632 0.00 0.00 43.93 3.01
274 275 0.363512 CGATCAACAACTCGCTCACG 59.636 55.000 0.00 0.00 42.01 4.35
275 276 1.387084 GTCGATCAACAACTCGCTCAC 59.613 52.381 0.00 0.00 34.94 3.51
276 277 1.000717 TGTCGATCAACAACTCGCTCA 60.001 47.619 0.00 0.00 34.94 4.26
277 278 1.698165 TGTCGATCAACAACTCGCTC 58.302 50.000 0.00 0.00 34.94 5.03
278 279 2.148916 TTGTCGATCAACAACTCGCT 57.851 45.000 0.00 0.00 34.31 4.93
289 290 5.580479 GCAGAAGCATGTCGTTGTCGATC 62.580 52.174 0.00 0.00 43.68 3.69
290 291 3.807223 GCAGAAGCATGTCGTTGTCGAT 61.807 50.000 0.00 0.00 43.68 3.59
291 292 1.418373 CAGAAGCATGTCGTTGTCGA 58.582 50.000 0.00 0.00 44.12 4.20
292 293 0.179240 GCAGAAGCATGTCGTTGTCG 60.179 55.000 0.00 0.00 41.58 4.35
293 294 1.136141 CAGCAGAAGCATGTCGTTGTC 60.136 52.381 0.00 0.00 45.49 3.18
294 295 0.870393 CAGCAGAAGCATGTCGTTGT 59.130 50.000 0.00 0.00 45.49 3.32
295 296 0.453950 GCAGCAGAAGCATGTCGTTG 60.454 55.000 0.00 0.00 45.49 4.10
296 297 0.604780 AGCAGCAGAAGCATGTCGTT 60.605 50.000 0.00 0.00 45.49 3.85
297 298 1.004080 AGCAGCAGAAGCATGTCGT 60.004 52.632 0.00 0.00 45.49 4.34
298 299 1.424240 CAGCAGCAGAAGCATGTCG 59.576 57.895 0.00 0.00 45.49 4.35
299 300 1.136984 GCAGCAGCAGAAGCATGTC 59.863 57.895 0.00 0.00 45.49 3.06
300 301 0.035725 TAGCAGCAGCAGAAGCATGT 60.036 50.000 3.17 0.00 45.49 3.21
301 302 1.064208 CTTAGCAGCAGCAGAAGCATG 59.936 52.381 3.17 0.00 45.49 4.06
302 303 1.339824 ACTTAGCAGCAGCAGAAGCAT 60.340 47.619 13.44 0.00 45.49 3.79
303 304 0.035881 ACTTAGCAGCAGCAGAAGCA 59.964 50.000 13.44 0.00 45.49 3.91
304 305 1.130186 GAACTTAGCAGCAGCAGAAGC 59.870 52.381 13.44 0.00 45.49 3.86
305 306 2.697654 AGAACTTAGCAGCAGCAGAAG 58.302 47.619 3.17 8.90 45.49 2.85
306 307 2.847327 AGAACTTAGCAGCAGCAGAA 57.153 45.000 3.17 0.00 45.49 3.02
307 308 3.589988 GTTAGAACTTAGCAGCAGCAGA 58.410 45.455 3.17 0.00 45.49 4.26
308 309 2.675348 GGTTAGAACTTAGCAGCAGCAG 59.325 50.000 3.17 0.00 45.49 4.24
309 310 2.303022 AGGTTAGAACTTAGCAGCAGCA 59.697 45.455 3.17 0.00 45.49 4.41
310 311 2.933260 GAGGTTAGAACTTAGCAGCAGC 59.067 50.000 0.00 0.00 42.56 5.25
311 312 3.055819 TGGAGGTTAGAACTTAGCAGCAG 60.056 47.826 0.00 0.00 0.00 4.24
312 313 2.903784 TGGAGGTTAGAACTTAGCAGCA 59.096 45.455 0.00 0.00 0.00 4.41
313 314 3.263261 GTGGAGGTTAGAACTTAGCAGC 58.737 50.000 0.00 0.00 0.00 5.25
314 315 3.676324 CGGTGGAGGTTAGAACTTAGCAG 60.676 52.174 0.00 0.00 0.00 4.24
315 316 2.232941 CGGTGGAGGTTAGAACTTAGCA 59.767 50.000 0.00 0.00 0.00 3.49
316 317 2.233186 ACGGTGGAGGTTAGAACTTAGC 59.767 50.000 0.00 0.00 0.00 3.09
317 318 3.427233 CGACGGTGGAGGTTAGAACTTAG 60.427 52.174 0.00 0.00 0.00 2.18
318 319 2.489329 CGACGGTGGAGGTTAGAACTTA 59.511 50.000 0.00 0.00 0.00 2.24
319 320 1.271656 CGACGGTGGAGGTTAGAACTT 59.728 52.381 0.00 0.00 0.00 2.66
320 321 0.886563 CGACGGTGGAGGTTAGAACT 59.113 55.000 0.00 0.00 0.00 3.01
321 322 0.600057 ACGACGGTGGAGGTTAGAAC 59.400 55.000 0.00 0.00 0.00 3.01
322 323 2.198827 TACGACGGTGGAGGTTAGAA 57.801 50.000 0.00 0.00 0.00 2.10
323 324 1.812571 GTTACGACGGTGGAGGTTAGA 59.187 52.381 0.00 0.00 0.00 2.10
324 325 1.135286 GGTTACGACGGTGGAGGTTAG 60.135 57.143 0.00 0.00 0.00 2.34
325 326 0.887933 GGTTACGACGGTGGAGGTTA 59.112 55.000 0.00 0.00 0.00 2.85
326 327 0.829182 AGGTTACGACGGTGGAGGTT 60.829 55.000 0.00 0.00 0.00 3.50
327 328 1.228675 AGGTTACGACGGTGGAGGT 60.229 57.895 0.00 0.00 0.00 3.85
328 329 1.214589 CAGGTTACGACGGTGGAGG 59.785 63.158 0.00 0.00 0.00 4.30
329 330 1.214589 CCAGGTTACGACGGTGGAG 59.785 63.158 0.00 0.00 34.16 3.86
330 331 2.277591 CCCAGGTTACGACGGTGGA 61.278 63.158 0.00 0.00 34.16 4.02
331 332 2.263540 CCCAGGTTACGACGGTGG 59.736 66.667 0.00 0.00 32.79 4.61
332 333 2.433664 GCCCAGGTTACGACGGTG 60.434 66.667 0.00 0.00 0.00 4.94
333 334 4.060038 CGCCCAGGTTACGACGGT 62.060 66.667 0.00 0.00 0.00 4.83
334 335 4.060038 ACGCCCAGGTTACGACGG 62.060 66.667 0.00 0.00 0.00 4.79
335 336 2.807895 CACGCCCAGGTTACGACG 60.808 66.667 0.00 0.00 0.00 5.12
336 337 0.881600 AAACACGCCCAGGTTACGAC 60.882 55.000 0.00 0.00 0.00 4.34
337 338 0.600782 GAAACACGCCCAGGTTACGA 60.601 55.000 0.00 0.00 0.00 3.43
338 339 0.881159 TGAAACACGCCCAGGTTACG 60.881 55.000 0.00 0.00 0.00 3.18
339 340 0.872388 CTGAAACACGCCCAGGTTAC 59.128 55.000 0.00 0.00 0.00 2.50
340 341 0.250553 CCTGAAACACGCCCAGGTTA 60.251 55.000 0.00 0.00 41.81 2.85
341 342 1.528309 CCTGAAACACGCCCAGGTT 60.528 57.895 0.00 0.00 41.81 3.50
342 343 2.113139 CCTGAAACACGCCCAGGT 59.887 61.111 0.00 0.00 41.81 4.00
344 345 2.281761 AGCCTGAAACACGCCCAG 60.282 61.111 0.00 0.00 0.00 4.45
345 346 2.594303 CAGCCTGAAACACGCCCA 60.594 61.111 0.00 0.00 0.00 5.36
346 347 1.896660 TTCAGCCTGAAACACGCCC 60.897 57.895 4.27 0.00 32.71 6.13
347 348 1.282875 GTTCAGCCTGAAACACGCC 59.717 57.895 9.08 0.00 38.22 5.68
348 349 0.040958 CTGTTCAGCCTGAAACACGC 60.041 55.000 9.08 0.00 38.22 5.34
349 350 0.040958 GCTGTTCAGCCTGAAACACG 60.041 55.000 9.08 5.71 38.22 4.49
350 351 0.040958 CGCTGTTCAGCCTGAAACAC 60.041 55.000 9.08 0.00 38.22 3.32
351 352 1.785041 GCGCTGTTCAGCCTGAAACA 61.785 55.000 9.08 8.82 38.22 2.83
352 353 1.081840 GCGCTGTTCAGCCTGAAAC 60.082 57.895 9.08 4.55 38.22 2.78
353 354 2.606961 CGCGCTGTTCAGCCTGAAA 61.607 57.895 9.08 0.00 38.22 2.69
354 355 3.043713 CGCGCTGTTCAGCCTGAA 61.044 61.111 17.42 2.24 33.32 3.02
355 356 3.921767 CTCGCGCTGTTCAGCCTGA 62.922 63.158 17.42 13.98 0.00 3.86
356 357 3.485431 CTCGCGCTGTTCAGCCTG 61.485 66.667 17.42 10.87 0.00 4.85
370 371 3.488090 GACCGAAAAGCCCGCTCG 61.488 66.667 0.00 0.00 0.00 5.03
371 372 1.745489 ATGACCGAAAAGCCCGCTC 60.745 57.895 0.00 0.00 0.00 5.03
372 373 2.040544 CATGACCGAAAAGCCCGCT 61.041 57.895 0.00 0.00 0.00 5.52
373 374 2.485122 CATGACCGAAAAGCCCGC 59.515 61.111 0.00 0.00 0.00 6.13
374 375 3.051392 GCCATGACCGAAAAGCCCG 62.051 63.158 0.00 0.00 0.00 6.13
375 376 1.657751 GAGCCATGACCGAAAAGCCC 61.658 60.000 0.00 0.00 0.00 5.19
376 377 1.803289 GAGCCATGACCGAAAAGCC 59.197 57.895 0.00 0.00 0.00 4.35
377 378 1.425428 CGAGCCATGACCGAAAAGC 59.575 57.895 0.00 0.00 0.00 3.51
378 379 1.021390 AGCGAGCCATGACCGAAAAG 61.021 55.000 0.00 0.00 0.00 2.27
379 380 1.003839 AGCGAGCCATGACCGAAAA 60.004 52.632 0.00 0.00 0.00 2.29
380 381 1.741401 CAGCGAGCCATGACCGAAA 60.741 57.895 0.00 0.00 0.00 3.46
381 382 2.125552 CAGCGAGCCATGACCGAA 60.126 61.111 0.00 0.00 0.00 4.30
382 383 4.819761 GCAGCGAGCCATGACCGA 62.820 66.667 0.00 0.00 37.23 4.69
384 385 3.200593 CTGCAGCGAGCCATGACC 61.201 66.667 0.00 0.00 44.83 4.02
385 386 1.300971 TTTCTGCAGCGAGCCATGAC 61.301 55.000 9.47 0.00 44.83 3.06
386 387 0.393402 ATTTCTGCAGCGAGCCATGA 60.393 50.000 9.47 0.00 44.83 3.07
387 388 0.454600 AATTTCTGCAGCGAGCCATG 59.545 50.000 9.47 0.00 44.83 3.66
388 389 0.454600 CAATTTCTGCAGCGAGCCAT 59.545 50.000 9.47 0.00 44.83 4.40
389 390 1.588824 CCAATTTCTGCAGCGAGCCA 61.589 55.000 9.47 0.00 44.83 4.75
390 391 1.138247 CCAATTTCTGCAGCGAGCC 59.862 57.895 9.47 0.00 44.83 4.70
391 392 1.515736 GCCAATTTCTGCAGCGAGC 60.516 57.895 9.47 2.00 45.96 5.03
392 393 0.179171 CAGCCAATTTCTGCAGCGAG 60.179 55.000 9.47 0.00 0.00 5.03
393 394 1.588824 CCAGCCAATTTCTGCAGCGA 61.589 55.000 9.47 0.00 0.00 4.93
394 395 1.153901 CCAGCCAATTTCTGCAGCG 60.154 57.895 9.47 0.00 0.00 5.18
395 396 0.108945 GACCAGCCAATTTCTGCAGC 60.109 55.000 9.47 0.00 0.00 5.25
396 397 0.529378 GGACCAGCCAATTTCTGCAG 59.471 55.000 7.63 7.63 36.34 4.41
397 398 0.178967 TGGACCAGCCAATTTCTGCA 60.179 50.000 0.00 0.00 45.87 4.41
398 399 2.657297 TGGACCAGCCAATTTCTGC 58.343 52.632 0.00 0.00 45.87 4.26
406 407 4.322681 TGGTAACTGGACCAGCCA 57.677 55.556 21.95 17.31 44.79 4.75
411 412 2.094906 GCCGAAATTTGGTAACTGGACC 60.095 50.000 0.00 0.00 40.21 4.46
412 413 2.094906 GGCCGAAATTTGGTAACTGGAC 60.095 50.000 0.00 0.00 37.61 4.02
413 414 2.164338 GGCCGAAATTTGGTAACTGGA 58.836 47.619 0.00 0.00 37.61 3.86
414 415 1.203758 GGGCCGAAATTTGGTAACTGG 59.796 52.381 0.00 0.00 37.61 4.00
415 416 1.135517 CGGGCCGAAATTTGGTAACTG 60.136 52.381 24.41 0.00 37.61 3.16
416 417 1.170442 CGGGCCGAAATTTGGTAACT 58.830 50.000 24.41 0.00 37.61 2.24
417 418 1.166989 TCGGGCCGAAATTTGGTAAC 58.833 50.000 29.11 0.00 31.06 2.50
418 419 1.813786 CTTCGGGCCGAAATTTGGTAA 59.186 47.619 37.48 16.22 45.23 2.85
419 420 1.271488 ACTTCGGGCCGAAATTTGGTA 60.271 47.619 37.48 16.95 45.23 3.25
420 421 0.538746 ACTTCGGGCCGAAATTTGGT 60.539 50.000 37.48 28.69 45.23 3.67
421 422 0.601057 AACTTCGGGCCGAAATTTGG 59.399 50.000 37.48 28.06 45.23 3.28
422 423 2.324860 GAAACTTCGGGCCGAAATTTG 58.675 47.619 41.42 30.93 43.41 2.32
423 424 1.271379 GGAAACTTCGGGCCGAAATTT 59.729 47.619 38.36 38.36 45.39 1.82
424 425 0.885879 GGAAACTTCGGGCCGAAATT 59.114 50.000 37.48 32.75 45.23 1.82
425 426 0.037734 AGGAAACTTCGGGCCGAAAT 59.962 50.000 37.48 29.04 45.23 2.17
426 427 0.604511 GAGGAAACTTCGGGCCGAAA 60.605 55.000 37.48 23.06 45.23 3.46
427 428 1.004200 GAGGAAACTTCGGGCCGAA 60.004 57.895 36.33 36.33 44.43 4.30
428 429 2.660802 GAGGAAACTTCGGGCCGA 59.339 61.111 27.46 27.46 44.43 5.54
429 430 2.813908 CGAGGAAACTTCGGGCCG 60.814 66.667 22.51 22.51 44.43 6.13
430 431 2.436115 CCGAGGAAACTTCGGGCC 60.436 66.667 13.14 0.00 44.43 5.80
434 435 1.445582 CCGGACCGAGGAAACTTCG 60.446 63.158 17.49 0.00 44.43 3.79
435 436 0.389556 GACCGGACCGAGGAAACTTC 60.390 60.000 17.49 0.00 44.43 3.01
436 437 1.670015 GACCGGACCGAGGAAACTT 59.330 57.895 17.49 0.00 44.43 2.66
438 439 2.263852 GGACCGGACCGAGGAAAC 59.736 66.667 17.49 0.00 0.00 2.78
457 458 1.340248 TCAGTCGGACAGGTCAAAGAC 59.660 52.381 11.27 7.58 33.46 3.01
458 459 1.613925 CTCAGTCGGACAGGTCAAAGA 59.386 52.381 11.27 0.00 0.00 2.52
459 460 1.937108 GCTCAGTCGGACAGGTCAAAG 60.937 57.143 11.27 0.00 0.00 2.77
460 461 0.033504 GCTCAGTCGGACAGGTCAAA 59.966 55.000 11.27 0.00 0.00 2.69
461 462 1.666011 GCTCAGTCGGACAGGTCAA 59.334 57.895 11.27 0.00 0.00 3.18
462 463 2.626780 CGCTCAGTCGGACAGGTCA 61.627 63.158 11.27 0.00 0.00 4.02
463 464 2.179517 CGCTCAGTCGGACAGGTC 59.820 66.667 11.27 0.00 0.00 3.85
471 472 2.202492 CTTCGGTCCGCTCAGTCG 60.202 66.667 6.34 0.00 0.00 4.18
472 473 2.507324 GCTTCGGTCCGCTCAGTC 60.507 66.667 6.34 0.00 0.00 3.51
473 474 2.992114 AGCTTCGGTCCGCTCAGT 60.992 61.111 6.34 0.00 0.00 3.41
474 475 2.507992 CAGCTTCGGTCCGCTCAG 60.508 66.667 6.34 3.47 33.45 3.35
475 476 4.742201 GCAGCTTCGGTCCGCTCA 62.742 66.667 6.34 0.00 33.45 4.26
476 477 4.742201 TGCAGCTTCGGTCCGCTC 62.742 66.667 6.34 0.00 33.45 5.03
477 478 4.749310 CTGCAGCTTCGGTCCGCT 62.749 66.667 6.34 0.00 36.83 5.52
481 482 3.984193 ATGGCCTGCAGCTTCGGTC 62.984 63.158 8.66 0.00 43.05 4.79
482 483 3.574074 AATGGCCTGCAGCTTCGGT 62.574 57.895 8.66 0.00 43.05 4.69
483 484 1.880819 AAAATGGCCTGCAGCTTCGG 61.881 55.000 8.66 0.00 43.05 4.30
484 485 0.037975 AAAAATGGCCTGCAGCTTCG 60.038 50.000 8.66 0.00 43.05 3.79
485 486 1.718396 GAAAAATGGCCTGCAGCTTC 58.282 50.000 8.66 0.00 43.05 3.86
486 487 0.037975 CGAAAAATGGCCTGCAGCTT 60.038 50.000 8.66 0.00 43.05 3.74
487 488 1.181098 ACGAAAAATGGCCTGCAGCT 61.181 50.000 8.66 0.00 43.05 4.24
488 489 0.733909 GACGAAAAATGGCCTGCAGC 60.734 55.000 8.66 3.68 42.60 5.25
489 490 0.454957 CGACGAAAAATGGCCTGCAG 60.455 55.000 6.78 6.78 0.00 4.41
490 491 1.578926 CGACGAAAAATGGCCTGCA 59.421 52.632 3.32 0.00 0.00 4.41
491 492 1.154035 CCGACGAAAAATGGCCTGC 60.154 57.895 3.32 0.00 0.00 4.85
492 493 1.154035 GCCGACGAAAAATGGCCTG 60.154 57.895 3.32 0.00 41.70 4.85
493 494 2.686816 CGCCGACGAAAAATGGCCT 61.687 57.895 3.32 0.00 44.71 5.19
494 495 2.202427 CGCCGACGAAAAATGGCC 60.202 61.111 0.00 0.00 44.71 5.36
495 496 2.874315 GCGCCGACGAAAAATGGC 60.874 61.111 0.00 0.00 43.93 4.40
496 497 2.573167 CGCGCCGACGAAAAATGG 60.573 61.111 0.00 0.00 43.93 3.16
497 498 2.573167 CCGCGCCGACGAAAAATG 60.573 61.111 0.00 0.00 43.93 2.32
498 499 4.454717 GCCGCGCCGACGAAAAAT 62.455 61.111 0.00 0.00 43.93 1.82
516 517 4.457496 AGCAGGATGTCGCCGGTG 62.457 66.667 9.28 9.28 39.31 4.94
517 518 4.148825 GAGCAGGATGTCGCCGGT 62.149 66.667 1.90 0.00 39.31 5.28
518 519 3.842923 AGAGCAGGATGTCGCCGG 61.843 66.667 0.00 0.00 39.31 6.13
519 520 2.584418 CAGAGCAGGATGTCGCCG 60.584 66.667 0.00 0.00 39.31 6.46
520 521 2.202987 CCAGAGCAGGATGTCGCC 60.203 66.667 0.00 0.00 39.31 5.54
521 522 1.520342 GACCAGAGCAGGATGTCGC 60.520 63.158 0.00 0.00 39.31 5.19
522 523 1.226802 CGACCAGAGCAGGATGTCG 60.227 63.158 0.00 0.00 42.13 4.35
523 524 0.459237 CACGACCAGAGCAGGATGTC 60.459 60.000 0.00 0.00 39.31 3.06
524 525 0.900182 TCACGACCAGAGCAGGATGT 60.900 55.000 0.00 0.00 39.31 3.06
525 526 0.179116 CTCACGACCAGAGCAGGATG 60.179 60.000 0.00 0.00 40.87 3.51
526 527 0.323816 TCTCACGACCAGAGCAGGAT 60.324 55.000 0.00 0.00 33.15 3.24
527 528 0.323816 ATCTCACGACCAGAGCAGGA 60.324 55.000 0.00 0.00 33.15 3.86
528 529 0.102120 GATCTCACGACCAGAGCAGG 59.898 60.000 0.00 0.00 33.15 4.85
529 530 0.102120 GGATCTCACGACCAGAGCAG 59.898 60.000 0.00 0.00 33.15 4.24
530 531 1.657751 CGGATCTCACGACCAGAGCA 61.658 60.000 0.00 0.00 33.15 4.26
531 532 1.064946 CGGATCTCACGACCAGAGC 59.935 63.158 0.00 0.00 33.15 4.09
532 533 1.064946 GCGGATCTCACGACCAGAG 59.935 63.158 0.00 0.00 34.42 3.35
533 534 2.761195 CGCGGATCTCACGACCAGA 61.761 63.158 0.00 0.00 0.00 3.86
534 535 2.278206 CGCGGATCTCACGACCAG 60.278 66.667 0.00 0.00 0.00 4.00
535 536 4.492160 GCGCGGATCTCACGACCA 62.492 66.667 8.83 0.00 0.00 4.02
536 537 4.492160 TGCGCGGATCTCACGACC 62.492 66.667 8.83 0.00 0.00 4.79
537 538 2.951745 CTGCGCGGATCTCACGAC 60.952 66.667 11.90 0.00 0.00 4.34
538 539 4.193334 CCTGCGCGGATCTCACGA 62.193 66.667 20.25 0.00 33.16 4.35
540 541 4.819761 TGCCTGCGCGGATCTCAC 62.820 66.667 20.25 1.26 38.08 3.51
541 542 4.819761 GTGCCTGCGCGGATCTCA 62.820 66.667 20.25 7.07 38.08 3.27
542 543 3.138930 TAGTGCCTGCGCGGATCTC 62.139 63.158 20.25 9.89 38.08 2.75
543 544 3.147595 TAGTGCCTGCGCGGATCT 61.148 61.111 20.25 16.72 38.08 2.75
544 545 2.962253 GTAGTGCCTGCGCGGATC 60.962 66.667 20.25 9.73 38.08 3.36
545 546 4.873129 CGTAGTGCCTGCGCGGAT 62.873 66.667 20.25 7.01 38.08 4.18
550 551 4.111016 TCGTCCGTAGTGCCTGCG 62.111 66.667 5.87 5.87 39.17 5.18
551 552 2.202623 CTCGTCCGTAGTGCCTGC 60.203 66.667 0.00 0.00 0.00 4.85
552 553 2.202623 GCTCGTCCGTAGTGCCTG 60.203 66.667 0.00 0.00 0.00 4.85
553 554 2.675423 TGCTCGTCCGTAGTGCCT 60.675 61.111 0.00 0.00 0.00 4.75
554 555 2.506438 GTGCTCGTCCGTAGTGCC 60.506 66.667 0.00 0.00 0.00 5.01
555 556 2.874780 CGTGCTCGTCCGTAGTGC 60.875 66.667 0.00 0.00 0.00 4.40
556 557 2.874780 GCGTGCTCGTCCGTAGTG 60.875 66.667 10.18 0.00 39.49 2.74
557 558 4.112341 GGCGTGCTCGTCCGTAGT 62.112 66.667 10.18 0.00 39.49 2.73
579 580 4.821589 GAGAAGGTCGGCAGGGCG 62.822 72.222 9.13 9.13 0.00 6.13
580 581 4.475135 GGAGAAGGTCGGCAGGGC 62.475 72.222 0.00 0.00 0.00 5.19
581 582 3.787001 GGGAGAAGGTCGGCAGGG 61.787 72.222 0.00 0.00 0.00 4.45
582 583 4.148825 CGGGAGAAGGTCGGCAGG 62.149 72.222 0.00 0.00 0.00 4.85
583 584 4.821589 GCGGGAGAAGGTCGGCAG 62.822 72.222 0.00 0.00 0.00 4.85
585 586 4.516195 GAGCGGGAGAAGGTCGGC 62.516 72.222 0.00 0.00 0.00 5.54
586 587 3.839432 GGAGCGGGAGAAGGTCGG 61.839 72.222 0.00 0.00 37.02 4.79
587 588 2.756283 AGGAGCGGGAGAAGGTCG 60.756 66.667 0.00 0.00 37.02 4.79
588 589 2.896443 CAGGAGCGGGAGAAGGTC 59.104 66.667 0.00 0.00 35.57 3.85
589 590 3.394836 GCAGGAGCGGGAGAAGGT 61.395 66.667 0.00 0.00 0.00 3.50
603 604 2.750166 TCTCTGTTCTCTTCTACCGCAG 59.250 50.000 0.00 0.00 0.00 5.18
604 605 2.791655 TCTCTGTTCTCTTCTACCGCA 58.208 47.619 0.00 0.00 0.00 5.69
605 606 3.851976 TTCTCTGTTCTCTTCTACCGC 57.148 47.619 0.00 0.00 0.00 5.68
606 607 6.928979 TCTATTCTCTGTTCTCTTCTACCG 57.071 41.667 0.00 0.00 0.00 4.02
607 608 8.962679 TCTTTCTATTCTCTGTTCTCTTCTACC 58.037 37.037 0.00 0.00 0.00 3.18
610 611 9.927668 CTTTCTTTCTATTCTCTGTTCTCTTCT 57.072 33.333 0.00 0.00 0.00 2.85
611 612 9.921637 TCTTTCTTTCTATTCTCTGTTCTCTTC 57.078 33.333 0.00 0.00 0.00 2.87
612 613 9.927668 CTCTTTCTTTCTATTCTCTGTTCTCTT 57.072 33.333 0.00 0.00 0.00 2.85
613 614 8.034804 GCTCTTTCTTTCTATTCTCTGTTCTCT 58.965 37.037 0.00 0.00 0.00 3.10
614 615 7.009174 CGCTCTTTCTTTCTATTCTCTGTTCTC 59.991 40.741 0.00 0.00 0.00 2.87
615 616 6.811170 CGCTCTTTCTTTCTATTCTCTGTTCT 59.189 38.462 0.00 0.00 0.00 3.01
616 617 6.035542 CCGCTCTTTCTTTCTATTCTCTGTTC 59.964 42.308 0.00 0.00 0.00 3.18
617 618 5.872070 CCGCTCTTTCTTTCTATTCTCTGTT 59.128 40.000 0.00 0.00 0.00 3.16
618 619 5.046950 ACCGCTCTTTCTTTCTATTCTCTGT 60.047 40.000 0.00 0.00 0.00 3.41
619 620 5.415221 ACCGCTCTTTCTTTCTATTCTCTG 58.585 41.667 0.00 0.00 0.00 3.35
620 621 5.186021 TGACCGCTCTTTCTTTCTATTCTCT 59.814 40.000 0.00 0.00 0.00 3.10
621 622 5.289917 GTGACCGCTCTTTCTTTCTATTCTC 59.710 44.000 0.00 0.00 0.00 2.87
622 623 5.172205 GTGACCGCTCTTTCTTTCTATTCT 58.828 41.667 0.00 0.00 0.00 2.40
623 624 4.031878 CGTGACCGCTCTTTCTTTCTATTC 59.968 45.833 0.00 0.00 0.00 1.75
624 625 3.927142 CGTGACCGCTCTTTCTTTCTATT 59.073 43.478 0.00 0.00 0.00 1.73
625 626 3.512680 CGTGACCGCTCTTTCTTTCTAT 58.487 45.455 0.00 0.00 0.00 1.98
626 627 2.942710 CGTGACCGCTCTTTCTTTCTA 58.057 47.619 0.00 0.00 0.00 2.10
627 628 1.784525 CGTGACCGCTCTTTCTTTCT 58.215 50.000 0.00 0.00 0.00 2.52
643 644 1.067060 TCTCAGATAATCACGGGCGTG 59.933 52.381 0.00 0.00 46.64 5.34
644 645 1.399714 TCTCAGATAATCACGGGCGT 58.600 50.000 0.00 0.00 0.00 5.68
645 646 2.732412 ATCTCAGATAATCACGGGCG 57.268 50.000 0.00 0.00 0.00 6.13
646 647 4.461081 AGTCTATCTCAGATAATCACGGGC 59.539 45.833 0.00 0.00 35.17 6.13
647 648 6.207614 TCAAGTCTATCTCAGATAATCACGGG 59.792 42.308 0.00 0.00 35.17 5.28
648 649 7.208225 TCAAGTCTATCTCAGATAATCACGG 57.792 40.000 0.00 0.00 35.17 4.94
649 650 9.689976 AAATCAAGTCTATCTCAGATAATCACG 57.310 33.333 0.00 0.00 35.17 4.35
655 656 9.823647 GGACAAAAATCAAGTCTATCTCAGATA 57.176 33.333 0.00 0.00 35.17 1.98
656 657 8.547173 AGGACAAAAATCAAGTCTATCTCAGAT 58.453 33.333 0.00 0.00 35.17 2.90
657 658 7.911651 AGGACAAAAATCAAGTCTATCTCAGA 58.088 34.615 0.00 0.00 32.98 3.27
658 659 8.558973 AAGGACAAAAATCAAGTCTATCTCAG 57.441 34.615 0.00 0.00 32.98 3.35
659 660 8.924511 AAAGGACAAAAATCAAGTCTATCTCA 57.075 30.769 0.00 0.00 32.98 3.27
664 665 9.621629 TGAAGTAAAGGACAAAAATCAAGTCTA 57.378 29.630 0.00 0.00 32.98 2.59
665 666 8.519799 TGAAGTAAAGGACAAAAATCAAGTCT 57.480 30.769 0.00 0.00 32.98 3.24
666 667 8.406297 ACTGAAGTAAAGGACAAAAATCAAGTC 58.594 33.333 0.00 0.00 0.00 3.01
667 668 8.293699 ACTGAAGTAAAGGACAAAAATCAAGT 57.706 30.769 0.00 0.00 0.00 3.16
668 669 8.405531 TGACTGAAGTAAAGGACAAAAATCAAG 58.594 33.333 0.00 0.00 0.00 3.02
669 670 8.287439 TGACTGAAGTAAAGGACAAAAATCAA 57.713 30.769 0.00 0.00 0.00 2.57
670 671 7.873719 TGACTGAAGTAAAGGACAAAAATCA 57.126 32.000 0.00 0.00 0.00 2.57
671 672 8.406297 ACTTGACTGAAGTAAAGGACAAAAATC 58.594 33.333 11.48 0.00 43.54 2.17
672 673 8.293699 ACTTGACTGAAGTAAAGGACAAAAAT 57.706 30.769 11.48 0.00 43.54 1.82
673 674 7.696992 ACTTGACTGAAGTAAAGGACAAAAA 57.303 32.000 11.48 0.00 43.54 1.94
674 675 8.205131 GTACTTGACTGAAGTAAAGGACAAAA 57.795 34.615 15.55 0.00 45.72 2.44
675 676 7.781548 GTACTTGACTGAAGTAAAGGACAAA 57.218 36.000 15.55 0.00 45.72 2.83
678 679 6.746120 TCTGTACTTGACTGAAGTAAAGGAC 58.254 40.000 14.06 14.06 46.62 3.85
679 680 6.971726 TCTGTACTTGACTGAAGTAAAGGA 57.028 37.500 11.48 0.73 46.62 3.36
680 681 7.644986 CTTCTGTACTTGACTGAAGTAAAGG 57.355 40.000 11.48 0.00 46.62 3.11
687 688 6.321435 TGAGTCTTCTTCTGTACTTGACTGAA 59.679 38.462 0.00 0.00 42.00 3.02
688 689 5.828328 TGAGTCTTCTTCTGTACTTGACTGA 59.172 40.000 0.00 0.00 34.07 3.41
689 690 6.078202 TGAGTCTTCTTCTGTACTTGACTG 57.922 41.667 0.00 0.00 34.07 3.51
690 691 5.242838 CCTGAGTCTTCTTCTGTACTTGACT 59.757 44.000 0.00 0.00 36.22 3.41
691 692 5.010213 ACCTGAGTCTTCTTCTGTACTTGAC 59.990 44.000 0.00 0.00 0.00 3.18
692 693 5.141182 ACCTGAGTCTTCTTCTGTACTTGA 58.859 41.667 0.00 0.00 0.00 3.02
693 694 5.010112 TGACCTGAGTCTTCTTCTGTACTTG 59.990 44.000 0.00 0.00 43.91 3.16
694 695 5.010213 GTGACCTGAGTCTTCTTCTGTACTT 59.990 44.000 0.00 0.00 43.91 2.24
695 696 4.521256 GTGACCTGAGTCTTCTTCTGTACT 59.479 45.833 0.00 0.00 43.91 2.73
696 697 4.614078 CGTGACCTGAGTCTTCTTCTGTAC 60.614 50.000 0.00 0.00 43.91 2.90
697 698 3.502595 CGTGACCTGAGTCTTCTTCTGTA 59.497 47.826 0.00 0.00 43.91 2.74
698 699 2.294791 CGTGACCTGAGTCTTCTTCTGT 59.705 50.000 0.00 0.00 43.91 3.41
699 700 2.924454 GCGTGACCTGAGTCTTCTTCTG 60.924 54.545 0.00 0.00 43.91 3.02
700 701 1.271102 GCGTGACCTGAGTCTTCTTCT 59.729 52.381 0.00 0.00 43.91 2.85
701 702 1.670380 GGCGTGACCTGAGTCTTCTTC 60.670 57.143 0.00 0.00 43.91 2.87
702 703 0.318762 GGCGTGACCTGAGTCTTCTT 59.681 55.000 0.00 0.00 43.91 2.52
703 704 1.536943 GGGCGTGACCTGAGTCTTCT 61.537 60.000 0.00 0.00 43.91 2.85
704 705 1.079750 GGGCGTGACCTGAGTCTTC 60.080 63.158 0.00 0.00 43.91 2.87
705 706 3.060866 GGGCGTGACCTGAGTCTT 58.939 61.111 0.00 0.00 43.91 3.01
712 713 2.037144 AGATAATAACGGGCGTGACCT 58.963 47.619 0.00 0.00 39.10 3.85
713 714 2.132762 CAGATAATAACGGGCGTGACC 58.867 52.381 0.00 0.00 37.93 4.02
714 715 3.050619 CTCAGATAATAACGGGCGTGAC 58.949 50.000 0.00 0.00 0.00 3.67
715 716 2.691526 ACTCAGATAATAACGGGCGTGA 59.308 45.455 0.00 0.00 0.00 4.35
716 717 3.050619 GACTCAGATAATAACGGGCGTG 58.949 50.000 0.00 0.00 0.00 5.34
717 718 2.691526 TGACTCAGATAATAACGGGCGT 59.308 45.455 0.00 0.00 0.00 5.68
718 719 3.050619 GTGACTCAGATAATAACGGGCG 58.949 50.000 0.00 0.00 0.00 6.13
719 720 3.802685 GTGTGACTCAGATAATAACGGGC 59.197 47.826 0.00 0.00 0.00 6.13
720 721 5.006153 TGTGTGACTCAGATAATAACGGG 57.994 43.478 0.00 0.00 0.00 5.28
721 722 5.463392 CCATGTGTGACTCAGATAATAACGG 59.537 44.000 0.00 0.00 0.00 4.44
722 723 6.199154 GTCCATGTGTGACTCAGATAATAACG 59.801 42.308 0.00 0.00 0.00 3.18
723 724 7.041721 TGTCCATGTGTGACTCAGATAATAAC 58.958 38.462 2.85 0.00 33.83 1.89
724 725 7.181569 TGTCCATGTGTGACTCAGATAATAA 57.818 36.000 2.85 0.00 33.83 1.40
725 726 6.790232 TGTCCATGTGTGACTCAGATAATA 57.210 37.500 2.85 0.00 33.83 0.98
726 727 5.682234 TGTCCATGTGTGACTCAGATAAT 57.318 39.130 2.85 0.00 33.83 1.28
727 728 5.422145 CATGTCCATGTGTGACTCAGATAA 58.578 41.667 0.00 0.00 34.23 1.75
728 729 4.681512 GCATGTCCATGTGTGACTCAGATA 60.682 45.833 8.91 0.00 40.80 1.98
729 730 3.870274 CATGTCCATGTGTGACTCAGAT 58.130 45.455 0.00 0.00 34.23 2.90
730 731 2.613725 GCATGTCCATGTGTGACTCAGA 60.614 50.000 8.91 0.00 40.80 3.27
731 732 1.736126 GCATGTCCATGTGTGACTCAG 59.264 52.381 8.91 0.00 40.80 3.35
732 733 1.072015 TGCATGTCCATGTGTGACTCA 59.928 47.619 8.91 0.00 40.80 3.41
733 734 1.736126 CTGCATGTCCATGTGTGACTC 59.264 52.381 8.91 0.00 40.80 3.36
734 735 1.072806 ACTGCATGTCCATGTGTGACT 59.927 47.619 8.91 0.00 40.80 3.41
735 736 1.527034 ACTGCATGTCCATGTGTGAC 58.473 50.000 8.91 0.00 40.80 3.67
736 737 2.275134 AACTGCATGTCCATGTGTGA 57.725 45.000 8.91 0.00 40.80 3.58
737 738 2.352030 GGAAACTGCATGTCCATGTGTG 60.352 50.000 8.91 2.90 40.80 3.82
738 739 1.888512 GGAAACTGCATGTCCATGTGT 59.111 47.619 8.91 5.87 40.80 3.72
739 740 1.203052 GGGAAACTGCATGTCCATGTG 59.797 52.381 8.91 5.32 40.80 3.21
740 741 1.549203 GGGAAACTGCATGTCCATGT 58.451 50.000 8.91 0.00 40.80 3.21
741 742 0.819582 GGGGAAACTGCATGTCCATG 59.180 55.000 11.38 2.86 41.60 3.66
742 743 0.409092 TGGGGAAACTGCATGTCCAT 59.591 50.000 11.38 0.00 32.70 3.41
743 744 0.251297 CTGGGGAAACTGCATGTCCA 60.251 55.000 11.38 4.35 32.70 4.02
744 745 0.967380 CCTGGGGAAACTGCATGTCC 60.967 60.000 0.00 0.00 0.00 4.02
745 746 0.967380 CCCTGGGGAAACTGCATGTC 60.967 60.000 4.27 0.00 37.50 3.06
746 747 1.077265 CCCTGGGGAAACTGCATGT 59.923 57.895 4.27 0.00 37.50 3.21
747 748 4.023137 CCCTGGGGAAACTGCATG 57.977 61.111 4.27 0.00 37.50 4.06
758 759 1.143813 ACATATCTCTTGCCCCTGGG 58.856 55.000 5.50 5.50 38.57 4.45
759 760 3.244700 CCTAACATATCTCTTGCCCCTGG 60.245 52.174 0.00 0.00 0.00 4.45
760 761 3.648067 TCCTAACATATCTCTTGCCCCTG 59.352 47.826 0.00 0.00 0.00 4.45
761 762 3.941629 TCCTAACATATCTCTTGCCCCT 58.058 45.455 0.00 0.00 0.00 4.79
762 763 4.706842 TTCCTAACATATCTCTTGCCCC 57.293 45.455 0.00 0.00 0.00 5.80
763 764 7.038658 ACTCTATTCCTAACATATCTCTTGCCC 60.039 40.741 0.00 0.00 0.00 5.36
764 765 7.902087 ACTCTATTCCTAACATATCTCTTGCC 58.098 38.462 0.00 0.00 0.00 4.52
837 838 4.408276 AGCAGTTAGAGAGTACAAGGTCA 58.592 43.478 0.00 0.00 0.00 4.02
866 878 8.088981 TGTTAAGATGAGAGAGAAAGTACAACC 58.911 37.037 0.00 0.00 0.00 3.77
1008 1032 8.635765 AAAAAGTGATTTGCCAGAAGTAGATA 57.364 30.769 0.00 0.00 0.00 1.98
1073 1176 1.134401 CCTTTCCTGCGATGGCTCTTA 60.134 52.381 0.15 0.00 40.82 2.10
1498 2347 3.287222 ACATCTCTTCTTCTCCGAGGAG 58.713 50.000 12.78 12.78 43.21 3.69
1788 3130 2.126228 GGTGGCGTCGACGATGAA 60.126 61.111 39.74 18.83 43.02 2.57
1791 3133 4.430765 GGTGGTGGCGTCGACGAT 62.431 66.667 39.74 0.00 43.02 3.73
1820 3162 1.079438 GGAGGAGGAGGTGGTGTCT 59.921 63.158 0.00 0.00 0.00 3.41
1877 3913 2.940890 GAATTGGCGCAGGATCCGGA 62.941 60.000 16.86 6.61 0.00 5.14
2071 4107 0.317479 GTACTTGGACTCAGCACCGT 59.683 55.000 0.00 0.00 0.00 4.83
2138 4174 4.674581 AGAGAGGATAAGGAGAGGAGGATT 59.325 45.833 0.00 0.00 0.00 3.01
2279 4318 7.047891 TGGCTGCTATGCAATATATTAGTACC 58.952 38.462 0.00 0.00 38.41 3.34
2283 4322 6.259608 GGACTGGCTGCTATGCAATATATTAG 59.740 42.308 0.00 0.00 38.41 1.73
2419 4462 8.496707 TGTAGAATATGTACACGTAGTCTGAA 57.503 34.615 17.48 6.62 41.61 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.