Multiple sequence alignment - TraesCS7A01G036900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G036900 chr7A 100.000 2216 0 0 1 2216 16637527 16635312 0.000000e+00 4093
1 TraesCS7A01G036900 chr7A 98.990 594 5 1 349 941 16636587 16635994 0.000000e+00 1062
2 TraesCS7A01G036900 chr7A 98.990 594 5 1 941 1534 16637179 16636587 0.000000e+00 1062
3 TraesCS7A01G036900 chr4B 96.218 952 35 1 1 951 251997417 251998368 0.000000e+00 1557
4 TraesCS7A01G036900 chr4B 96.489 940 33 0 1 940 395243951 395244890 0.000000e+00 1554
5 TraesCS7A01G036900 chr4B 96.796 593 18 1 941 1533 395244299 395244890 0.000000e+00 989
6 TraesCS7A01G036900 chr4B 96.459 593 20 1 941 1533 251997765 251998356 0.000000e+00 977
7 TraesCS7A01G036900 chr4B 95.158 537 26 0 404 940 604143985 604144521 0.000000e+00 848
8 TraesCS7A01G036900 chr4B 95.167 538 25 1 996 1533 604143985 604144521 0.000000e+00 848
9 TraesCS7A01G036900 chr4B 94.030 134 8 0 277 410 564154017 564154150 1.040000e-48 204
10 TraesCS7A01G036900 chr4B 96.774 62 2 0 941 1002 564154089 564154150 1.080000e-18 104
11 TraesCS7A01G036900 chr4B 98.246 57 1 0 941 997 564154836 564154892 1.400000e-17 100
12 TraesCS7A01G036900 chr5A 96.489 940 33 0 1 940 129595735 129596674 0.000000e+00 1554
13 TraesCS7A01G036900 chr5A 96.375 938 34 0 3 940 44092505 44093442 0.000000e+00 1544
14 TraesCS7A01G036900 chr5A 96.627 593 19 1 941 1533 129596083 129596674 0.000000e+00 983
15 TraesCS7A01G036900 chr5A 96.459 593 20 1 941 1533 44092851 44093442 0.000000e+00 977
16 TraesCS7A01G036900 chr5A 82.935 293 40 4 1933 2216 487279823 487279532 2.820000e-64 255
17 TraesCS7A01G036900 chr2A 96.361 797 29 0 144 940 442717682 442716886 0.000000e+00 1312
18 TraesCS7A01G036900 chr2A 96.683 603 17 3 941 1541 442717477 442716876 0.000000e+00 1000
19 TraesCS7A01G036900 chr2A 96.959 559 16 1 975 1533 442716885 442716328 0.000000e+00 937
20 TraesCS7A01G036900 chr2A 96.953 558 17 0 383 940 442716885 442716328 0.000000e+00 937
21 TraesCS7A01G036900 chr2A 96.519 316 11 0 1 316 442717998 442717683 7.010000e-145 523
22 TraesCS7A01G036900 chr7D 96.209 633 19 2 1585 2216 17244886 17244258 0.000000e+00 1031
23 TraesCS7A01G036900 chr7D 82.807 285 42 5 1933 2216 425035689 425035411 4.730000e-62 248
24 TraesCS7A01G036900 chr5B 94.805 539 26 2 996 1533 492815934 492815397 0.000000e+00 839
25 TraesCS7A01G036900 chr5B 83.137 255 41 2 1963 2216 326616814 326617067 4.760000e-57 231
26 TraesCS7A01G036900 chr5B 94.574 129 7 0 277 405 513613933 513613805 1.340000e-47 200
27 TraesCS7A01G036900 chr5B 98.246 57 1 0 941 997 539436542 539436598 1.400000e-17 100
28 TraesCS7A01G036900 chr3A 94.312 545 29 2 404 946 27583464 27584008 0.000000e+00 833
29 TraesCS7A01G036900 chr3A 95.588 272 9 2 2 271 675318997 675318727 1.220000e-117 433
30 TraesCS7A01G036900 chr3B 95.636 275 10 1 1 273 12308196 12308470 7.260000e-120 440
31 TraesCS7A01G036900 chr3B 94.366 284 12 2 1 280 77700609 77700892 1.220000e-117 433
32 TraesCS7A01G036900 chr3B 80.690 290 47 8 1932 2216 412207503 412207218 1.330000e-52 217
33 TraesCS7A01G036900 chr7B 95.238 273 11 1 1 271 226421394 226421666 4.370000e-117 431
34 TraesCS7A01G036900 chr2D 86.328 256 30 2 1962 2216 255596237 255596488 7.800000e-70 274
35 TraesCS7A01G036900 chr5D 82.578 287 42 5 1933 2216 385410407 385410126 1.700000e-61 246
36 TraesCS7A01G036900 chr5D 82.042 284 48 3 1933 2213 56443609 56443326 2.840000e-59 239
37 TraesCS7A01G036900 chr3D 81.787 291 38 13 1933 2216 272923643 272923925 1.710000e-56 230
38 TraesCS7A01G036900 chr6B 95.349 129 5 1 277 405 623453878 623454005 1.040000e-48 204
39 TraesCS7A01G036900 chr1A 94.574 129 7 0 277 405 20992299 20992171 1.340000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G036900 chr7A 16635312 16637527 2215 True 2072.333333 4093 99.326667 1 2216 3 chr7A.!!$R1 2215
1 TraesCS7A01G036900 chr4B 395243951 395244890 939 False 1271.500000 1554 96.642500 1 1533 2 chr4B.!!$F2 1532
2 TraesCS7A01G036900 chr4B 251997417 251998368 951 False 1267.000000 1557 96.338500 1 1533 2 chr4B.!!$F1 1532
3 TraesCS7A01G036900 chr4B 604143985 604144521 536 False 848.000000 848 95.162500 404 1533 2 chr4B.!!$F4 1129
4 TraesCS7A01G036900 chr5A 129595735 129596674 939 False 1268.500000 1554 96.558000 1 1533 2 chr5A.!!$F2 1532
5 TraesCS7A01G036900 chr5A 44092505 44093442 937 False 1260.500000 1544 96.417000 3 1533 2 chr5A.!!$F1 1530
6 TraesCS7A01G036900 chr2A 442716328 442717998 1670 True 941.800000 1312 96.695000 1 1541 5 chr2A.!!$R1 1540
7 TraesCS7A01G036900 chr7D 17244258 17244886 628 True 1031.000000 1031 96.209000 1585 2216 1 chr7D.!!$R1 631
8 TraesCS7A01G036900 chr5B 492815397 492815934 537 True 839.000000 839 94.805000 996 1533 1 chr5B.!!$R1 537
9 TraesCS7A01G036900 chr3A 27583464 27584008 544 False 833.000000 833 94.312000 404 946 1 chr3A.!!$F1 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 1188 0.029567 GGATGGAGTCGTCGCAGTAG 59.97 60.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2095 2828 1.518325 TGTATGGTTGCACGTCCTTG 58.482 50.0 0.0 0.0 0.0 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
193 194 3.849145 CCGGTTTTGTATGTGTTTATGCG 59.151 43.478 0.00 0.00 0.00 4.73
221 395 6.540914 GGCAACCATACTAACTTACAATGCTA 59.459 38.462 0.00 0.00 0.00 3.49
306 480 4.402056 AACAGTGTAATACCTGATCCGG 57.598 45.455 13.29 0.91 0.00 5.14
308 482 3.637229 ACAGTGTAATACCTGATCCGGAG 59.363 47.826 11.34 0.00 0.00 4.63
313 487 3.477210 AATACCTGATCCGGAGAAAGC 57.523 47.619 11.34 0.00 0.00 3.51
345 519 8.528044 TTAATATTATTGGAGGAAAAAGGCGT 57.472 30.769 0.00 0.00 0.00 5.68
386 560 3.507786 CGGTGCAAATAAGGCCTTAAAC 58.492 45.455 28.50 19.28 0.00 2.01
393 567 5.748630 GCAAATAAGGCCTTAAACAGTATGC 59.251 40.000 28.50 22.73 42.53 3.14
408 1140 1.810151 GTATGCCTTCAAGTTTGCCGA 59.190 47.619 0.00 0.00 0.00 5.54
409 1141 1.549203 ATGCCTTCAAGTTTGCCGAT 58.451 45.000 0.00 0.00 0.00 4.18
410 1142 0.597568 TGCCTTCAAGTTTGCCGATG 59.402 50.000 0.00 0.00 0.00 3.84
411 1143 0.109132 GCCTTCAAGTTTGCCGATGG 60.109 55.000 0.00 0.00 0.00 3.51
412 1144 1.247567 CCTTCAAGTTTGCCGATGGT 58.752 50.000 0.00 0.00 0.00 3.55
413 1145 1.613437 CCTTCAAGTTTGCCGATGGTT 59.387 47.619 0.00 0.00 0.00 3.67
414 1146 2.607771 CCTTCAAGTTTGCCGATGGTTG 60.608 50.000 0.00 0.00 0.00 3.77
415 1147 0.313672 TCAAGTTTGCCGATGGTTGC 59.686 50.000 0.00 0.00 0.00 4.17
416 1148 0.667184 CAAGTTTGCCGATGGTTGCC 60.667 55.000 0.00 0.00 0.00 4.52
417 1149 2.126502 GTTTGCCGATGGTTGCCG 60.127 61.111 0.00 0.00 0.00 5.69
418 1150 2.596046 TTTGCCGATGGTTGCCGT 60.596 55.556 0.00 0.00 0.00 5.68
419 1151 1.302591 TTTGCCGATGGTTGCCGTA 60.303 52.632 0.00 0.00 0.00 4.02
420 1152 1.302383 TTTGCCGATGGTTGCCGTAG 61.302 55.000 0.00 0.00 0.00 3.51
421 1153 2.173758 TTGCCGATGGTTGCCGTAGA 62.174 55.000 0.00 0.00 0.00 2.59
422 1154 1.883084 GCCGATGGTTGCCGTAGAG 60.883 63.158 0.00 0.00 0.00 2.43
423 1155 1.883084 CCGATGGTTGCCGTAGAGC 60.883 63.158 0.00 0.00 0.00 4.09
424 1156 1.153647 CGATGGTTGCCGTAGAGCA 60.154 57.895 0.00 0.00 42.17 4.26
425 1157 0.530650 CGATGGTTGCCGTAGAGCAT 60.531 55.000 0.00 0.00 43.64 3.79
426 1158 0.940126 GATGGTTGCCGTAGAGCATG 59.060 55.000 0.00 0.00 43.64 4.06
427 1159 1.097547 ATGGTTGCCGTAGAGCATGC 61.098 55.000 10.51 10.51 43.64 4.06
428 1160 2.472909 GGTTGCCGTAGAGCATGCC 61.473 63.158 15.66 6.03 43.64 4.40
429 1161 2.124736 TTGCCGTAGAGCATGCCC 60.125 61.111 15.66 1.16 43.64 5.36
430 1162 2.669133 TTGCCGTAGAGCATGCCCT 61.669 57.895 15.66 11.24 43.64 5.19
431 1163 2.590007 GCCGTAGAGCATGCCCTG 60.590 66.667 15.66 0.00 0.00 4.45
432 1164 2.109799 CCGTAGAGCATGCCCTGG 59.890 66.667 15.66 2.13 0.00 4.45
433 1165 2.434843 CCGTAGAGCATGCCCTGGA 61.435 63.158 15.66 0.00 0.00 3.86
434 1166 1.227380 CGTAGAGCATGCCCTGGAC 60.227 63.158 15.66 2.76 0.00 4.02
435 1167 1.227380 GTAGAGCATGCCCTGGACG 60.227 63.158 15.66 0.00 0.00 4.79
436 1168 1.685765 TAGAGCATGCCCTGGACGT 60.686 57.895 15.66 0.00 0.00 4.34
437 1169 1.960040 TAGAGCATGCCCTGGACGTG 61.960 60.000 15.66 0.00 0.00 4.49
438 1170 4.415150 AGCATGCCCTGGACGTGG 62.415 66.667 15.66 0.00 0.00 4.94
439 1171 4.408821 GCATGCCCTGGACGTGGA 62.409 66.667 6.36 0.00 0.00 4.02
440 1172 2.591753 CATGCCCTGGACGTGGAT 59.408 61.111 0.00 0.00 0.00 3.41
441 1173 1.820906 CATGCCCTGGACGTGGATG 60.821 63.158 0.00 0.00 0.00 3.51
442 1174 3.047807 ATGCCCTGGACGTGGATGG 62.048 63.158 0.00 0.00 0.00 3.51
443 1175 3.399181 GCCCTGGACGTGGATGGA 61.399 66.667 0.00 0.00 0.00 3.41
444 1176 2.903357 CCCTGGACGTGGATGGAG 59.097 66.667 0.00 0.00 0.00 3.86
445 1177 1.990060 CCCTGGACGTGGATGGAGT 60.990 63.158 0.00 0.00 0.00 3.85
446 1178 1.517832 CCTGGACGTGGATGGAGTC 59.482 63.158 0.00 0.00 0.00 3.36
447 1179 1.139734 CTGGACGTGGATGGAGTCG 59.860 63.158 0.00 0.00 35.87 4.18
448 1180 1.595993 CTGGACGTGGATGGAGTCGT 61.596 60.000 0.00 0.00 39.21 4.34
449 1181 4.787999 GACGTGGATGGAGTCGTC 57.212 61.111 0.00 0.00 43.81 4.20
450 1182 1.226323 GACGTGGATGGAGTCGTCG 60.226 63.158 0.00 0.00 41.89 5.12
451 1183 2.579787 CGTGGATGGAGTCGTCGC 60.580 66.667 0.00 0.00 0.00 5.19
452 1184 2.571757 GTGGATGGAGTCGTCGCA 59.428 61.111 0.00 0.00 0.00 5.10
453 1185 1.517257 GTGGATGGAGTCGTCGCAG 60.517 63.158 0.00 0.00 0.00 5.18
454 1186 1.977009 TGGATGGAGTCGTCGCAGT 60.977 57.895 0.00 0.00 0.00 4.40
455 1187 0.678684 TGGATGGAGTCGTCGCAGTA 60.679 55.000 0.00 0.00 0.00 2.74
456 1188 0.029567 GGATGGAGTCGTCGCAGTAG 59.970 60.000 0.00 0.00 0.00 2.57
457 1189 0.592754 GATGGAGTCGTCGCAGTAGC 60.593 60.000 0.00 0.00 37.42 3.58
467 1199 4.100981 GCAGTAGCGGCAGAAGAG 57.899 61.111 1.45 0.00 0.00 2.85
468 1200 2.170434 GCAGTAGCGGCAGAAGAGC 61.170 63.158 1.45 0.00 0.00 4.09
469 1201 1.216444 CAGTAGCGGCAGAAGAGCA 59.784 57.895 1.45 0.00 35.83 4.26
470 1202 1.080995 CAGTAGCGGCAGAAGAGCAC 61.081 60.000 1.45 0.00 35.83 4.40
471 1203 1.811679 GTAGCGGCAGAAGAGCACC 60.812 63.158 1.45 0.00 35.83 5.01
472 1204 1.984570 TAGCGGCAGAAGAGCACCT 60.985 57.895 1.45 0.00 35.83 4.00
473 1205 2.230994 TAGCGGCAGAAGAGCACCTG 62.231 60.000 1.45 0.00 35.83 4.00
474 1206 2.435586 CGGCAGAAGAGCACCTGG 60.436 66.667 0.00 0.00 35.83 4.45
475 1207 2.749441 GGCAGAAGAGCACCTGGC 60.749 66.667 0.00 0.00 46.15 4.85
476 1208 2.749441 GCAGAAGAGCACCTGGCC 60.749 66.667 0.00 0.00 46.50 5.36
477 1209 3.076092 CAGAAGAGCACCTGGCCT 58.924 61.111 3.32 0.00 46.50 5.19
478 1210 1.078567 CAGAAGAGCACCTGGCCTC 60.079 63.158 3.32 6.81 46.50 4.70
479 1211 2.270527 GAAGAGCACCTGGCCTCC 59.729 66.667 3.32 0.00 46.50 4.30
480 1212 2.530151 AAGAGCACCTGGCCTCCA 60.530 61.111 3.32 0.00 46.50 3.86
489 1221 4.975490 TGGCCTCCAGACAGAAGA 57.025 55.556 3.32 0.00 0.00 2.87
490 1222 3.406442 TGGCCTCCAGACAGAAGAT 57.594 52.632 3.32 0.00 0.00 2.40
491 1223 0.907486 TGGCCTCCAGACAGAAGATG 59.093 55.000 3.32 0.00 0.00 2.90
492 1224 1.198713 GGCCTCCAGACAGAAGATGA 58.801 55.000 0.00 0.00 0.00 2.92
493 1225 1.767681 GGCCTCCAGACAGAAGATGAT 59.232 52.381 0.00 0.00 0.00 2.45
494 1226 2.485124 GGCCTCCAGACAGAAGATGATG 60.485 54.545 0.00 0.00 0.00 3.07
495 1227 2.485124 GCCTCCAGACAGAAGATGATGG 60.485 54.545 0.00 0.00 39.32 3.51
496 1228 2.770802 CCTCCAGACAGAAGATGATGGT 59.229 50.000 0.00 0.00 39.14 3.55
497 1229 3.431905 CCTCCAGACAGAAGATGATGGTG 60.432 52.174 0.00 0.00 39.14 4.17
498 1230 2.502947 TCCAGACAGAAGATGATGGTGG 59.497 50.000 0.00 0.00 39.14 4.61
499 1231 2.286872 CAGACAGAAGATGATGGTGGC 58.713 52.381 0.00 0.00 0.00 5.01
500 1232 1.134580 AGACAGAAGATGATGGTGGCG 60.135 52.381 0.00 0.00 0.00 5.69
501 1233 0.904649 ACAGAAGATGATGGTGGCGA 59.095 50.000 0.00 0.00 0.00 5.54
502 1234 1.293924 CAGAAGATGATGGTGGCGAC 58.706 55.000 0.00 0.00 0.00 5.19
503 1235 0.904649 AGAAGATGATGGTGGCGACA 59.095 50.000 0.00 0.00 38.70 4.35
504 1236 1.278985 AGAAGATGATGGTGGCGACAA 59.721 47.619 0.00 0.00 46.06 3.18
512 1244 2.323105 GTGGCGACAACACGTGTG 59.677 61.111 24.16 18.06 46.06 3.82
513 1245 2.457778 GTGGCGACAACACGTGTGT 61.458 57.895 24.16 21.14 46.06 3.72
521 1253 2.420043 ACACGTGTGTTCCCGGAG 59.580 61.111 22.71 0.00 41.83 4.63
522 1254 2.129146 ACACGTGTGTTCCCGGAGA 61.129 57.895 22.71 0.00 41.83 3.71
523 1255 1.068417 CACGTGTGTTCCCGGAGAA 59.932 57.895 7.58 1.34 0.00 2.87
524 1256 0.531090 CACGTGTGTTCCCGGAGAAA 60.531 55.000 7.58 0.00 35.85 2.52
525 1257 0.249741 ACGTGTGTTCCCGGAGAAAG 60.250 55.000 0.73 0.00 35.85 2.62
526 1258 0.032952 CGTGTGTTCCCGGAGAAAGA 59.967 55.000 0.73 0.00 35.85 2.52
527 1259 1.509703 GTGTGTTCCCGGAGAAAGAC 58.490 55.000 0.73 3.68 35.85 3.01
528 1260 0.032952 TGTGTTCCCGGAGAAAGACG 59.967 55.000 0.73 0.00 35.85 4.18
529 1261 0.316204 GTGTTCCCGGAGAAAGACGA 59.684 55.000 0.73 0.00 35.85 4.20
530 1262 1.042229 TGTTCCCGGAGAAAGACGAA 58.958 50.000 0.73 0.00 35.85 3.85
531 1263 1.000506 TGTTCCCGGAGAAAGACGAAG 59.999 52.381 0.73 0.00 35.85 3.79
532 1264 0.037605 TTCCCGGAGAAAGACGAAGC 60.038 55.000 0.73 0.00 0.00 3.86
533 1265 0.898789 TCCCGGAGAAAGACGAAGCT 60.899 55.000 0.73 0.00 0.00 3.74
534 1266 0.458716 CCCGGAGAAAGACGAAGCTC 60.459 60.000 0.73 0.00 0.00 4.09
535 1267 0.458716 CCGGAGAAAGACGAAGCTCC 60.459 60.000 0.00 0.00 42.71 4.70
536 1268 0.528470 CGGAGAAAGACGAAGCTCCT 59.472 55.000 0.00 0.00 43.70 3.69
537 1269 1.468395 CGGAGAAAGACGAAGCTCCTC 60.468 57.143 0.00 0.00 43.70 3.71
538 1270 1.468395 GGAGAAAGACGAAGCTCCTCG 60.468 57.143 6.27 6.27 42.81 4.63
539 1271 0.109039 AGAAAGACGAAGCTCCTCGC 60.109 55.000 7.71 1.63 42.69 5.03
540 1272 1.406970 GAAAGACGAAGCTCCTCGCG 61.407 60.000 7.71 0.00 45.59 5.87
541 1273 3.973267 AAGACGAAGCTCCTCGCGC 62.973 63.158 7.71 0.00 45.59 6.86
542 1274 4.484258 GACGAAGCTCCTCGCGCT 62.484 66.667 5.56 0.00 45.59 5.92
546 1278 4.459089 AAGCTCCTCGCGCTTCCC 62.459 66.667 5.56 0.00 43.79 3.97
549 1281 4.069232 CTCCTCGCGCTTCCCACA 62.069 66.667 5.56 0.00 0.00 4.17
550 1282 3.376935 CTCCTCGCGCTTCCCACAT 62.377 63.158 5.56 0.00 0.00 3.21
551 1283 2.892425 CCTCGCGCTTCCCACATC 60.892 66.667 5.56 0.00 0.00 3.06
552 1284 3.257561 CTCGCGCTTCCCACATCG 61.258 66.667 5.56 0.00 0.00 3.84
553 1285 3.989698 CTCGCGCTTCCCACATCGT 62.990 63.158 5.56 0.00 0.00 3.73
554 1286 3.853330 CGCGCTTCCCACATCGTG 61.853 66.667 5.56 0.00 0.00 4.35
563 1295 3.388134 CACATCGTGGCTAGCGTG 58.612 61.111 9.00 6.21 0.00 5.34
564 1296 2.509336 ACATCGTGGCTAGCGTGC 60.509 61.111 9.00 0.03 0.00 5.34
565 1297 2.509111 CATCGTGGCTAGCGTGCA 60.509 61.111 9.00 0.00 34.04 4.57
566 1298 1.884464 CATCGTGGCTAGCGTGCAT 60.884 57.895 9.00 0.00 34.04 3.96
567 1299 1.884464 ATCGTGGCTAGCGTGCATG 60.884 57.895 9.00 6.97 34.04 4.06
568 1300 2.296814 ATCGTGGCTAGCGTGCATGA 62.297 55.000 10.93 14.30 34.04 3.07
569 1301 1.884464 CGTGGCTAGCGTGCATGAT 60.884 57.895 10.93 5.86 34.04 2.45
570 1302 1.645455 GTGGCTAGCGTGCATGATG 59.355 57.895 10.93 0.00 34.04 3.07
571 1303 1.524393 TGGCTAGCGTGCATGATGG 60.524 57.895 10.93 6.64 34.04 3.51
572 1304 2.635899 GCTAGCGTGCATGATGGC 59.364 61.111 16.86 16.86 0.00 4.40
573 1305 2.933666 CTAGCGTGCATGATGGCG 59.066 61.111 10.93 0.00 36.28 5.69
574 1306 2.588596 TAGCGTGCATGATGGCGG 60.589 61.111 10.93 0.00 36.28 6.13
577 1309 4.246206 CGTGCATGATGGCGGCAG 62.246 66.667 19.29 4.49 38.38 4.85
578 1310 3.896133 GTGCATGATGGCGGCAGG 61.896 66.667 19.29 8.06 38.38 4.85
595 1327 2.962253 GCGGCTCGCGATTAGCTT 60.962 61.111 10.36 0.00 44.55 3.74
596 1328 2.933203 GCGGCTCGCGATTAGCTTC 61.933 63.158 10.36 2.28 44.55 3.86
597 1329 2.303676 CGGCTCGCGATTAGCTTCC 61.304 63.158 10.36 1.65 45.59 3.46
598 1330 1.068250 GGCTCGCGATTAGCTTCCT 59.932 57.895 10.36 0.00 45.59 3.36
599 1331 0.314302 GGCTCGCGATTAGCTTCCTA 59.686 55.000 10.36 0.00 45.59 2.94
600 1332 1.269621 GGCTCGCGATTAGCTTCCTAA 60.270 52.381 10.36 0.00 45.59 2.69
601 1333 2.610727 GGCTCGCGATTAGCTTCCTAAT 60.611 50.000 10.36 0.00 44.80 1.73
602 1334 3.367087 GGCTCGCGATTAGCTTCCTAATA 60.367 47.826 10.36 0.00 42.76 0.98
603 1335 3.854809 GCTCGCGATTAGCTTCCTAATAG 59.145 47.826 10.36 0.00 42.76 1.73
604 1336 4.416620 CTCGCGATTAGCTTCCTAATAGG 58.583 47.826 10.36 0.00 42.76 2.57
605 1337 4.077108 TCGCGATTAGCTTCCTAATAGGA 58.923 43.478 3.71 4.61 42.76 2.94
606 1338 4.705507 TCGCGATTAGCTTCCTAATAGGAT 59.294 41.667 10.21 0.00 42.76 3.24
607 1339 4.800993 CGCGATTAGCTTCCTAATAGGATG 59.199 45.833 10.21 13.33 42.76 3.51
608 1340 5.112686 GCGATTAGCTTCCTAATAGGATGG 58.887 45.833 19.76 12.78 42.76 3.51
609 1341 5.105310 GCGATTAGCTTCCTAATAGGATGGA 60.105 44.000 19.76 2.28 42.76 3.41
610 1342 6.407525 GCGATTAGCTTCCTAATAGGATGGAT 60.408 42.308 19.76 12.85 42.76 3.41
611 1343 6.983307 CGATTAGCTTCCTAATAGGATGGATG 59.017 42.308 19.76 6.81 45.34 3.51
612 1344 4.566426 AGCTTCCTAATAGGATGGATGC 57.434 45.455 19.76 14.11 45.34 3.91
613 1345 3.055530 AGCTTCCTAATAGGATGGATGCG 60.056 47.826 19.76 2.61 45.34 4.73
614 1346 3.307059 GCTTCCTAATAGGATGGATGCGT 60.307 47.826 19.76 0.00 45.34 5.24
615 1347 4.499183 CTTCCTAATAGGATGGATGCGTC 58.501 47.826 10.21 0.00 45.34 5.19
616 1348 2.832129 TCCTAATAGGATGGATGCGTCC 59.168 50.000 18.69 18.69 40.06 4.79
617 1349 2.417379 CCTAATAGGATGGATGCGTCCG 60.417 54.545 20.05 5.22 42.25 4.79
618 1350 4.683808 CCTAATAGGATGGATGCGTCCGA 61.684 52.174 20.05 14.76 42.25 4.55
619 1351 6.459563 CCTAATAGGATGGATGCGTCCGAG 62.460 54.167 20.05 14.02 42.25 4.63
626 1358 2.510768 GGATGCGTCCGAGATAAGTT 57.489 50.000 9.75 0.00 34.13 2.66
627 1359 2.822764 GGATGCGTCCGAGATAAGTTT 58.177 47.619 9.75 0.00 34.13 2.66
628 1360 3.195661 GGATGCGTCCGAGATAAGTTTT 58.804 45.455 9.75 0.00 34.13 2.43
629 1361 3.621715 GGATGCGTCCGAGATAAGTTTTT 59.378 43.478 9.75 0.00 34.13 1.94
652 1384 9.527157 TTTTTAATAGGATGGATTTGTGTGAGA 57.473 29.630 0.00 0.00 0.00 3.27
653 1385 9.699410 TTTTAATAGGATGGATTTGTGTGAGAT 57.301 29.630 0.00 0.00 0.00 2.75
654 1386 9.699410 TTTAATAGGATGGATTTGTGTGAGATT 57.301 29.630 0.00 0.00 0.00 2.40
656 1388 8.915057 AATAGGATGGATTTGTGTGAGATTAG 57.085 34.615 0.00 0.00 0.00 1.73
657 1389 6.319048 AGGATGGATTTGTGTGAGATTAGT 57.681 37.500 0.00 0.00 0.00 2.24
658 1390 6.725364 AGGATGGATTTGTGTGAGATTAGTT 58.275 36.000 0.00 0.00 0.00 2.24
659 1391 7.177878 AGGATGGATTTGTGTGAGATTAGTTT 58.822 34.615 0.00 0.00 0.00 2.66
660 1392 7.671398 AGGATGGATTTGTGTGAGATTAGTTTT 59.329 33.333 0.00 0.00 0.00 2.43
661 1393 7.970614 GGATGGATTTGTGTGAGATTAGTTTTC 59.029 37.037 0.00 0.00 0.00 2.29
662 1394 8.641498 ATGGATTTGTGTGAGATTAGTTTTCT 57.359 30.769 0.00 0.00 0.00 2.52
663 1395 9.739276 ATGGATTTGTGTGAGATTAGTTTTCTA 57.261 29.630 0.00 0.00 0.00 2.10
664 1396 9.567776 TGGATTTGTGTGAGATTAGTTTTCTAA 57.432 29.630 0.00 0.00 45.00 2.10
681 1413 9.153479 AGTTTTCTAATAGGATAGATGCAGTCT 57.847 33.333 0.00 0.00 41.11 3.24
682 1414 9.202273 GTTTTCTAATAGGATAGATGCAGTCTG 57.798 37.037 8.40 0.00 37.83 3.51
683 1415 8.712228 TTTCTAATAGGATAGATGCAGTCTGA 57.288 34.615 3.32 0.00 37.83 3.27
684 1416 8.891985 TTCTAATAGGATAGATGCAGTCTGAT 57.108 34.615 3.32 0.00 37.83 2.90
685 1417 8.891985 TCTAATAGGATAGATGCAGTCTGATT 57.108 34.615 3.32 0.00 37.83 2.57
686 1418 9.319060 TCTAATAGGATAGATGCAGTCTGATTT 57.681 33.333 3.32 0.00 37.83 2.17
689 1421 6.992664 AGGATAGATGCAGTCTGATTTAGT 57.007 37.500 3.32 0.00 37.83 2.24
690 1422 7.372260 AGGATAGATGCAGTCTGATTTAGTT 57.628 36.000 3.32 0.00 37.83 2.24
691 1423 7.800092 AGGATAGATGCAGTCTGATTTAGTTT 58.200 34.615 3.32 0.00 37.83 2.66
692 1424 7.930865 AGGATAGATGCAGTCTGATTTAGTTTC 59.069 37.037 3.32 0.00 37.83 2.78
693 1425 7.172361 GGATAGATGCAGTCTGATTTAGTTTCC 59.828 40.741 3.32 0.00 37.83 3.13
694 1426 6.059787 AGATGCAGTCTGATTTAGTTTCCT 57.940 37.500 3.32 0.00 35.31 3.36
695 1427 7.187824 AGATGCAGTCTGATTTAGTTTCCTA 57.812 36.000 3.32 0.00 35.31 2.94
696 1428 7.271511 AGATGCAGTCTGATTTAGTTTCCTAG 58.728 38.462 3.32 0.00 35.31 3.02
697 1429 6.605471 TGCAGTCTGATTTAGTTTCCTAGA 57.395 37.500 3.32 0.00 0.00 2.43
698 1430 7.004555 TGCAGTCTGATTTAGTTTCCTAGAA 57.995 36.000 3.32 0.00 0.00 2.10
699 1431 7.624549 TGCAGTCTGATTTAGTTTCCTAGAAT 58.375 34.615 3.32 0.00 0.00 2.40
700 1432 8.758829 TGCAGTCTGATTTAGTTTCCTAGAATA 58.241 33.333 3.32 0.00 0.00 1.75
701 1433 9.255304 GCAGTCTGATTTAGTTTCCTAGAATAG 57.745 37.037 3.32 0.00 38.80 1.73
725 1457 7.313951 GGATGCACCTATGATTATTAGCTTC 57.686 40.000 0.00 0.00 35.41 3.86
726 1458 6.317391 GGATGCACCTATGATTATTAGCTTCC 59.683 42.308 0.00 0.00 37.72 3.46
727 1459 6.439636 TGCACCTATGATTATTAGCTTCCT 57.560 37.500 0.00 0.00 0.00 3.36
728 1460 7.553504 TGCACCTATGATTATTAGCTTCCTA 57.446 36.000 0.00 0.00 0.00 2.94
729 1461 7.973402 TGCACCTATGATTATTAGCTTCCTAA 58.027 34.615 0.00 0.00 37.90 2.69
730 1462 8.605947 TGCACCTATGATTATTAGCTTCCTAAT 58.394 33.333 0.00 0.00 44.38 1.73
731 1463 9.454859 GCACCTATGATTATTAGCTTCCTAATT 57.545 33.333 0.00 0.00 40.49 1.40
738 1470 9.342308 TGATTATTAGCTTCCTAATTGTTCAGG 57.658 33.333 0.00 0.00 40.49 3.86
739 1471 7.568199 TTATTAGCTTCCTAATTGTTCAGGC 57.432 36.000 0.00 0.00 40.49 4.85
740 1472 2.359900 AGCTTCCTAATTGTTCAGGCG 58.640 47.619 0.00 0.00 0.00 5.52
741 1473 2.084546 GCTTCCTAATTGTTCAGGCGT 58.915 47.619 0.00 0.00 0.00 5.68
742 1474 2.159517 GCTTCCTAATTGTTCAGGCGTG 60.160 50.000 0.00 0.00 0.00 5.34
743 1475 2.107950 TCCTAATTGTTCAGGCGTGG 57.892 50.000 6.56 0.00 0.00 4.94
744 1476 1.626321 TCCTAATTGTTCAGGCGTGGA 59.374 47.619 6.56 0.00 0.00 4.02
745 1477 2.009774 CCTAATTGTTCAGGCGTGGAG 58.990 52.381 6.56 0.00 0.00 3.86
746 1478 2.615493 CCTAATTGTTCAGGCGTGGAGT 60.615 50.000 6.56 0.00 0.00 3.85
747 1479 1.981256 AATTGTTCAGGCGTGGAGTT 58.019 45.000 6.56 0.00 0.00 3.01
748 1480 1.981256 ATTGTTCAGGCGTGGAGTTT 58.019 45.000 6.56 0.00 0.00 2.66
749 1481 1.305201 TTGTTCAGGCGTGGAGTTTC 58.695 50.000 6.56 0.00 0.00 2.78
750 1482 0.179234 TGTTCAGGCGTGGAGTTTCA 59.821 50.000 6.56 0.00 0.00 2.69
751 1483 1.202758 TGTTCAGGCGTGGAGTTTCAT 60.203 47.619 6.56 0.00 0.00 2.57
752 1484 2.037902 TGTTCAGGCGTGGAGTTTCATA 59.962 45.455 6.56 0.00 0.00 2.15
753 1485 3.270877 GTTCAGGCGTGGAGTTTCATAT 58.729 45.455 6.56 0.00 0.00 1.78
754 1486 3.627395 TCAGGCGTGGAGTTTCATATT 57.373 42.857 6.56 0.00 0.00 1.28
755 1487 3.950397 TCAGGCGTGGAGTTTCATATTT 58.050 40.909 6.56 0.00 0.00 1.40
756 1488 4.331968 TCAGGCGTGGAGTTTCATATTTT 58.668 39.130 6.56 0.00 0.00 1.82
757 1489 4.394920 TCAGGCGTGGAGTTTCATATTTTC 59.605 41.667 6.56 0.00 0.00 2.29
758 1490 3.694566 AGGCGTGGAGTTTCATATTTTCC 59.305 43.478 0.00 0.00 0.00 3.13
759 1491 3.694566 GGCGTGGAGTTTCATATTTTCCT 59.305 43.478 0.00 0.00 0.00 3.36
760 1492 4.201920 GGCGTGGAGTTTCATATTTTCCTC 60.202 45.833 0.00 0.00 0.00 3.71
761 1493 4.201920 GCGTGGAGTTTCATATTTTCCTCC 60.202 45.833 0.00 0.00 39.13 4.30
762 1494 4.941263 CGTGGAGTTTCATATTTTCCTCCA 59.059 41.667 0.00 0.00 44.55 3.86
764 1496 4.941263 TGGAGTTTCATATTTTCCTCCACG 59.059 41.667 0.00 0.00 42.54 4.94
765 1497 4.335594 GGAGTTTCATATTTTCCTCCACGG 59.664 45.833 0.00 0.00 38.65 4.94
766 1498 4.918588 AGTTTCATATTTTCCTCCACGGT 58.081 39.130 0.00 0.00 0.00 4.83
767 1499 4.700213 AGTTTCATATTTTCCTCCACGGTG 59.300 41.667 0.00 0.00 0.00 4.94
768 1500 3.275617 TCATATTTTCCTCCACGGTGG 57.724 47.619 21.27 21.27 39.43 4.61
769 1501 2.841266 TCATATTTTCCTCCACGGTGGA 59.159 45.455 27.17 27.17 45.98 4.02
776 1508 2.115910 TCCACGGTGGAGTACGGT 59.884 61.111 25.53 0.00 42.67 4.83
777 1509 1.973281 TCCACGGTGGAGTACGGTC 60.973 63.158 25.53 0.00 42.67 4.79
778 1510 2.270257 CCACGGTGGAGTACGGTCA 61.270 63.158 22.77 0.00 40.96 4.02
779 1511 1.211969 CACGGTGGAGTACGGTCAG 59.788 63.158 0.00 0.00 40.42 3.51
780 1512 1.228367 ACGGTGGAGTACGGTCAGT 60.228 57.895 0.00 0.00 38.30 3.41
781 1513 1.239968 ACGGTGGAGTACGGTCAGTC 61.240 60.000 0.00 0.00 38.30 3.51
782 1514 1.239296 CGGTGGAGTACGGTCAGTCA 61.239 60.000 0.00 0.00 0.00 3.41
783 1515 0.963962 GGTGGAGTACGGTCAGTCAA 59.036 55.000 0.00 0.00 0.00 3.18
784 1516 1.549170 GGTGGAGTACGGTCAGTCAAT 59.451 52.381 0.00 0.00 0.00 2.57
785 1517 2.607187 GTGGAGTACGGTCAGTCAATG 58.393 52.381 0.00 0.00 0.00 2.82
786 1518 2.029290 GTGGAGTACGGTCAGTCAATGT 60.029 50.000 0.00 0.00 0.00 2.71
787 1519 3.192001 GTGGAGTACGGTCAGTCAATGTA 59.808 47.826 0.00 0.00 0.00 2.29
788 1520 3.827876 TGGAGTACGGTCAGTCAATGTAA 59.172 43.478 0.00 0.00 0.00 2.41
789 1521 4.281435 TGGAGTACGGTCAGTCAATGTAAA 59.719 41.667 0.00 0.00 0.00 2.01
790 1522 5.046878 TGGAGTACGGTCAGTCAATGTAAAT 60.047 40.000 0.00 0.00 0.00 1.40
791 1523 5.873164 GGAGTACGGTCAGTCAATGTAAATT 59.127 40.000 0.00 0.00 0.00 1.82
792 1524 6.183360 GGAGTACGGTCAGTCAATGTAAATTG 60.183 42.308 0.00 0.00 0.00 2.32
793 1525 4.419522 ACGGTCAGTCAATGTAAATTGC 57.580 40.909 0.22 0.00 0.00 3.56
794 1526 4.072131 ACGGTCAGTCAATGTAAATTGCT 58.928 39.130 0.22 0.00 0.00 3.91
795 1527 5.242434 ACGGTCAGTCAATGTAAATTGCTA 58.758 37.500 0.22 0.00 0.00 3.49
796 1528 5.703592 ACGGTCAGTCAATGTAAATTGCTAA 59.296 36.000 0.22 0.00 0.00 3.09
797 1529 6.128282 ACGGTCAGTCAATGTAAATTGCTAAG 60.128 38.462 0.22 0.00 0.00 2.18
798 1530 6.128282 CGGTCAGTCAATGTAAATTGCTAAGT 60.128 38.462 0.22 0.00 0.00 2.24
799 1531 7.023575 GGTCAGTCAATGTAAATTGCTAAGTG 58.976 38.462 0.22 0.00 0.00 3.16
800 1532 6.524586 GTCAGTCAATGTAAATTGCTAAGTGC 59.475 38.462 0.22 0.00 43.25 4.40
813 1545 3.568538 GCTAAGTGCACACAGAAAATGG 58.431 45.455 21.04 0.00 42.31 3.16
814 1546 3.612479 GCTAAGTGCACACAGAAAATGGG 60.612 47.826 21.04 0.00 42.31 4.00
816 1548 2.387757 AGTGCACACAGAAAATGGGTT 58.612 42.857 21.04 0.00 45.97 4.11
817 1549 3.561143 AGTGCACACAGAAAATGGGTTA 58.439 40.909 21.04 0.00 45.97 2.85
818 1550 3.569701 AGTGCACACAGAAAATGGGTTAG 59.430 43.478 21.04 0.00 45.97 2.34
819 1551 2.890311 TGCACACAGAAAATGGGTTAGG 59.110 45.455 0.00 0.00 45.97 2.69
820 1552 2.890945 GCACACAGAAAATGGGTTAGGT 59.109 45.455 0.00 0.00 45.97 3.08
821 1553 3.320826 GCACACAGAAAATGGGTTAGGTT 59.679 43.478 0.00 0.00 45.97 3.50
822 1554 4.521256 GCACACAGAAAATGGGTTAGGTTA 59.479 41.667 0.00 0.00 45.97 2.85
823 1555 5.010213 GCACACAGAAAATGGGTTAGGTTAA 59.990 40.000 0.00 0.00 45.97 2.01
824 1556 6.677913 CACACAGAAAATGGGTTAGGTTAAG 58.322 40.000 0.00 0.00 45.97 1.85
825 1557 5.773176 ACACAGAAAATGGGTTAGGTTAAGG 59.227 40.000 0.00 0.00 45.97 2.69
826 1558 4.770531 ACAGAAAATGGGTTAGGTTAAGGC 59.229 41.667 0.00 0.00 0.00 4.35
827 1559 5.016831 CAGAAAATGGGTTAGGTTAAGGCT 58.983 41.667 0.00 0.00 0.00 4.58
828 1560 6.184789 CAGAAAATGGGTTAGGTTAAGGCTA 58.815 40.000 0.00 0.00 0.00 3.93
829 1561 6.661805 CAGAAAATGGGTTAGGTTAAGGCTAA 59.338 38.462 0.00 0.00 0.00 3.09
830 1562 6.662234 AGAAAATGGGTTAGGTTAAGGCTAAC 59.338 38.462 0.00 0.00 37.30 2.34
840 1572 5.729974 GGTTAAGGCTAACCGTTAGATTG 57.270 43.478 20.39 0.00 45.91 2.67
841 1573 5.422145 GGTTAAGGCTAACCGTTAGATTGA 58.578 41.667 20.39 9.04 45.91 2.57
842 1574 6.053650 GGTTAAGGCTAACCGTTAGATTGAT 58.946 40.000 20.39 5.45 45.91 2.57
843 1575 6.541278 GGTTAAGGCTAACCGTTAGATTGATT 59.459 38.462 20.39 9.65 45.91 2.57
844 1576 7.066645 GGTTAAGGCTAACCGTTAGATTGATTT 59.933 37.037 20.39 7.99 45.91 2.17
845 1577 8.456471 GTTAAGGCTAACCGTTAGATTGATTTT 58.544 33.333 20.39 6.90 42.76 1.82
846 1578 9.669887 TTAAGGCTAACCGTTAGATTGATTTTA 57.330 29.630 20.39 6.15 42.76 1.52
847 1579 7.549615 AGGCTAACCGTTAGATTGATTTTAC 57.450 36.000 20.39 0.67 42.76 2.01
848 1580 7.336396 AGGCTAACCGTTAGATTGATTTTACT 58.664 34.615 20.39 1.74 42.76 2.24
849 1581 7.280205 AGGCTAACCGTTAGATTGATTTTACTG 59.720 37.037 20.39 0.00 42.76 2.74
850 1582 7.407337 GCTAACCGTTAGATTGATTTTACTGG 58.593 38.462 20.39 0.00 35.20 4.00
851 1583 6.753107 AACCGTTAGATTGATTTTACTGGG 57.247 37.500 0.00 0.00 0.00 4.45
852 1584 4.638865 ACCGTTAGATTGATTTTACTGGGC 59.361 41.667 0.00 0.00 0.00 5.36
853 1585 4.036380 CCGTTAGATTGATTTTACTGGGCC 59.964 45.833 0.00 0.00 0.00 5.80
854 1586 4.881850 CGTTAGATTGATTTTACTGGGCCT 59.118 41.667 4.53 0.00 0.00 5.19
855 1587 6.053005 CGTTAGATTGATTTTACTGGGCCTA 58.947 40.000 4.53 0.00 0.00 3.93
856 1588 6.540914 CGTTAGATTGATTTTACTGGGCCTAA 59.459 38.462 4.53 0.00 0.00 2.69
857 1589 7.228706 CGTTAGATTGATTTTACTGGGCCTAAT 59.771 37.037 4.53 0.00 0.00 1.73
858 1590 8.568794 GTTAGATTGATTTTACTGGGCCTAATC 58.431 37.037 4.53 6.97 0.00 1.75
859 1591 5.765182 AGATTGATTTTACTGGGCCTAATCG 59.235 40.000 4.53 0.00 0.00 3.34
860 1592 4.497291 TGATTTTACTGGGCCTAATCGT 57.503 40.909 4.53 0.00 0.00 3.73
861 1593 4.196193 TGATTTTACTGGGCCTAATCGTG 58.804 43.478 4.53 0.00 0.00 4.35
862 1594 2.032680 TTTACTGGGCCTAATCGTGC 57.967 50.000 4.53 0.00 0.00 5.34
863 1595 0.179094 TTACTGGGCCTAATCGTGCG 60.179 55.000 4.53 0.00 0.00 5.34
864 1596 2.023414 TACTGGGCCTAATCGTGCGG 62.023 60.000 4.53 0.00 0.00 5.69
865 1597 3.385749 CTGGGCCTAATCGTGCGGT 62.386 63.158 4.53 0.00 0.00 5.68
866 1598 2.124860 GGGCCTAATCGTGCGGTT 60.125 61.111 0.84 0.00 0.00 4.44
867 1599 2.469516 GGGCCTAATCGTGCGGTTG 61.470 63.158 0.84 0.00 0.00 3.77
868 1600 1.743995 GGCCTAATCGTGCGGTTGT 60.744 57.895 0.00 0.00 0.00 3.32
869 1601 0.460635 GGCCTAATCGTGCGGTTGTA 60.461 55.000 0.00 0.00 0.00 2.41
870 1602 1.578583 GCCTAATCGTGCGGTTGTAT 58.421 50.000 0.00 0.00 0.00 2.29
871 1603 1.937899 GCCTAATCGTGCGGTTGTATT 59.062 47.619 0.00 0.00 0.00 1.89
872 1604 2.286184 GCCTAATCGTGCGGTTGTATTG 60.286 50.000 0.00 0.00 0.00 1.90
873 1605 2.286833 CCTAATCGTGCGGTTGTATTGG 59.713 50.000 0.00 0.00 0.00 3.16
874 1606 2.102070 AATCGTGCGGTTGTATTGGA 57.898 45.000 0.00 0.00 0.00 3.53
875 1607 2.325583 ATCGTGCGGTTGTATTGGAT 57.674 45.000 0.00 0.00 0.00 3.41
876 1608 1.647346 TCGTGCGGTTGTATTGGATC 58.353 50.000 0.00 0.00 0.00 3.36
877 1609 1.206132 TCGTGCGGTTGTATTGGATCT 59.794 47.619 0.00 0.00 0.00 2.75
878 1610 1.327460 CGTGCGGTTGTATTGGATCTG 59.673 52.381 0.00 0.00 0.00 2.90
879 1611 2.356135 GTGCGGTTGTATTGGATCTGT 58.644 47.619 0.00 0.00 0.00 3.41
880 1612 2.095853 GTGCGGTTGTATTGGATCTGTG 59.904 50.000 0.00 0.00 0.00 3.66
881 1613 2.290008 TGCGGTTGTATTGGATCTGTGT 60.290 45.455 0.00 0.00 0.00 3.72
882 1614 3.055747 TGCGGTTGTATTGGATCTGTGTA 60.056 43.478 0.00 0.00 0.00 2.90
883 1615 3.308866 GCGGTTGTATTGGATCTGTGTAC 59.691 47.826 0.00 0.00 0.00 2.90
884 1616 3.550275 CGGTTGTATTGGATCTGTGTACG 59.450 47.826 0.00 0.00 0.00 3.67
885 1617 3.308866 GGTTGTATTGGATCTGTGTACGC 59.691 47.826 0.00 0.00 0.00 4.42
886 1618 4.181578 GTTGTATTGGATCTGTGTACGCT 58.818 43.478 8.10 0.00 0.00 5.07
887 1619 4.465632 TGTATTGGATCTGTGTACGCTT 57.534 40.909 8.10 0.00 0.00 4.68
888 1620 4.827692 TGTATTGGATCTGTGTACGCTTT 58.172 39.130 8.10 0.00 0.00 3.51
889 1621 4.629634 TGTATTGGATCTGTGTACGCTTTG 59.370 41.667 8.10 0.00 0.00 2.77
890 1622 2.831685 TGGATCTGTGTACGCTTTGT 57.168 45.000 8.10 0.00 0.00 2.83
891 1623 2.412870 TGGATCTGTGTACGCTTTGTG 58.587 47.619 8.10 0.00 0.00 3.33
892 1624 1.732259 GGATCTGTGTACGCTTTGTGG 59.268 52.381 8.10 0.00 0.00 4.17
893 1625 1.732259 GATCTGTGTACGCTTTGTGGG 59.268 52.381 8.10 0.00 0.00 4.61
894 1626 0.250124 TCTGTGTACGCTTTGTGGGG 60.250 55.000 8.10 0.00 0.00 4.96
895 1627 0.534203 CTGTGTACGCTTTGTGGGGT 60.534 55.000 8.10 0.00 36.39 4.95
896 1628 0.816018 TGTGTACGCTTTGTGGGGTG 60.816 55.000 8.10 0.00 34.32 4.61
897 1629 0.816421 GTGTACGCTTTGTGGGGTGT 60.816 55.000 0.00 0.00 34.32 4.16
898 1630 0.816018 TGTACGCTTTGTGGGGTGTG 60.816 55.000 0.00 0.00 34.32 3.82
899 1631 1.894756 TACGCTTTGTGGGGTGTGC 60.895 57.895 0.00 0.00 34.32 4.57
900 1632 2.332312 TACGCTTTGTGGGGTGTGCT 62.332 55.000 0.00 0.00 34.32 4.40
901 1633 2.489275 CGCTTTGTGGGGTGTGCTT 61.489 57.895 0.00 0.00 0.00 3.91
902 1634 1.169661 CGCTTTGTGGGGTGTGCTTA 61.170 55.000 0.00 0.00 0.00 3.09
903 1635 1.036707 GCTTTGTGGGGTGTGCTTAA 58.963 50.000 0.00 0.00 0.00 1.85
904 1636 1.410882 GCTTTGTGGGGTGTGCTTAAA 59.589 47.619 0.00 0.00 0.00 1.52
905 1637 2.159028 GCTTTGTGGGGTGTGCTTAAAA 60.159 45.455 0.00 0.00 0.00 1.52
906 1638 3.680196 GCTTTGTGGGGTGTGCTTAAAAA 60.680 43.478 0.00 0.00 0.00 1.94
957 1689 7.552459 AGTATAGAAGACAAAGAAAGAGAGGC 58.448 38.462 0.00 0.00 0.00 4.70
958 1690 3.658709 AGAAGACAAAGAAAGAGAGGCG 58.341 45.455 0.00 0.00 0.00 5.52
959 1691 2.464157 AGACAAAGAAAGAGAGGCGG 57.536 50.000 0.00 0.00 0.00 6.13
960 1692 1.694696 AGACAAAGAAAGAGAGGCGGT 59.305 47.619 0.00 0.00 0.00 5.68
961 1693 1.801178 GACAAAGAAAGAGAGGCGGTG 59.199 52.381 0.00 0.00 0.00 4.94
962 1694 0.519077 CAAAGAAAGAGAGGCGGTGC 59.481 55.000 0.00 0.00 0.00 5.01
963 1695 0.108585 AAAGAAAGAGAGGCGGTGCA 59.891 50.000 0.00 0.00 0.00 4.57
964 1696 0.108585 AAGAAAGAGAGGCGGTGCAA 59.891 50.000 0.00 0.00 0.00 4.08
965 1697 0.108585 AGAAAGAGAGGCGGTGCAAA 59.891 50.000 0.00 0.00 0.00 3.68
966 1698 1.168714 GAAAGAGAGGCGGTGCAAAT 58.831 50.000 0.00 0.00 0.00 2.32
967 1699 2.027192 AGAAAGAGAGGCGGTGCAAATA 60.027 45.455 0.00 0.00 0.00 1.40
968 1700 2.489938 AAGAGAGGCGGTGCAAATAA 57.510 45.000 0.00 0.00 0.00 1.40
969 1701 2.029838 AGAGAGGCGGTGCAAATAAG 57.970 50.000 0.00 0.00 0.00 1.73
970 1702 1.017387 GAGAGGCGGTGCAAATAAGG 58.983 55.000 0.00 0.00 0.00 2.69
971 1703 1.032114 AGAGGCGGTGCAAATAAGGC 61.032 55.000 0.00 0.00 0.00 4.35
972 1704 2.004808 GAGGCGGTGCAAATAAGGCC 62.005 60.000 0.00 0.00 40.80 5.19
973 1705 2.052104 GGCGGTGCAAATAAGGCCT 61.052 57.895 0.00 0.00 37.57 5.19
974 1706 1.604147 GGCGGTGCAAATAAGGCCTT 61.604 55.000 24.18 24.18 37.57 4.35
975 1707 1.099689 GCGGTGCAAATAAGGCCTTA 58.900 50.000 27.11 27.11 0.00 2.69
976 1708 1.474879 GCGGTGCAAATAAGGCCTTAA 59.525 47.619 28.50 9.56 0.00 1.85
977 1709 2.094442 GCGGTGCAAATAAGGCCTTAAA 60.094 45.455 28.50 10.13 0.00 1.52
978 1710 3.507786 CGGTGCAAATAAGGCCTTAAAC 58.492 45.455 28.50 19.28 0.00 2.01
979 1711 3.057174 CGGTGCAAATAAGGCCTTAAACA 60.057 43.478 28.50 19.63 0.00 2.83
980 1712 4.494484 GGTGCAAATAAGGCCTTAAACAG 58.506 43.478 28.50 18.47 0.00 3.16
981 1713 4.021456 GGTGCAAATAAGGCCTTAAACAGT 60.021 41.667 28.50 9.56 0.00 3.55
982 1714 5.184287 GGTGCAAATAAGGCCTTAAACAGTA 59.816 40.000 28.50 15.03 0.00 2.74
983 1715 6.127451 GGTGCAAATAAGGCCTTAAACAGTAT 60.127 38.462 28.50 9.10 0.00 2.12
984 1716 6.751888 GTGCAAATAAGGCCTTAAACAGTATG 59.248 38.462 28.50 18.23 46.00 2.39
985 1717 5.748630 GCAAATAAGGCCTTAAACAGTATGC 59.251 40.000 28.50 22.73 42.53 3.14
986 1718 6.273071 CAAATAAGGCCTTAAACAGTATGCC 58.727 40.000 28.50 0.00 42.53 4.40
988 1720 3.739401 AGGCCTTAAACAGTATGCCTT 57.261 42.857 0.00 0.00 46.61 4.35
989 1721 3.621558 AGGCCTTAAACAGTATGCCTTC 58.378 45.455 0.00 0.00 46.61 3.46
990 1722 3.010138 AGGCCTTAAACAGTATGCCTTCA 59.990 43.478 0.00 0.00 46.61 3.02
991 1723 3.761752 GGCCTTAAACAGTATGCCTTCAA 59.238 43.478 0.00 0.00 42.53 2.69
992 1724 4.142381 GGCCTTAAACAGTATGCCTTCAAG 60.142 45.833 0.00 0.00 42.53 3.02
993 1725 4.459337 GCCTTAAACAGTATGCCTTCAAGT 59.541 41.667 0.00 0.00 42.53 3.16
994 1726 5.048013 GCCTTAAACAGTATGCCTTCAAGTT 60.048 40.000 0.00 0.00 42.53 2.66
1314 2046 7.678947 ATAGGATGCACTTGTGATTATTAGC 57.321 36.000 4.79 0.00 0.00 3.09
1325 2057 9.686683 ACTTGTGATTATTAGCTTCCTAATTGT 57.313 29.630 0.00 0.00 40.49 2.71
1447 2179 6.053005 CGTTAGATTGATTTTACTGGGCCTA 58.947 40.000 4.53 0.00 0.00 3.93
1562 2294 9.630098 AGAATTTTTCTAATTGTGTGCATGTAG 57.370 29.630 0.00 0.00 38.49 2.74
1563 2295 9.410556 GAATTTTTCTAATTGTGTGCATGTAGT 57.589 29.630 0.00 0.00 0.00 2.73
1564 2296 8.746922 ATTTTTCTAATTGTGTGCATGTAGTG 57.253 30.769 0.00 0.00 0.00 2.74
1565 2297 7.503521 TTTTCTAATTGTGTGCATGTAGTGA 57.496 32.000 0.00 0.00 0.00 3.41
1566 2298 7.686438 TTTCTAATTGTGTGCATGTAGTGAT 57.314 32.000 0.00 0.00 0.00 3.06
1567 2299 6.908870 TCTAATTGTGTGCATGTAGTGATC 57.091 37.500 0.00 0.00 0.00 2.92
1568 2300 6.405538 TCTAATTGTGTGCATGTAGTGATCA 58.594 36.000 0.00 0.00 0.00 2.92
1569 2301 7.049754 TCTAATTGTGTGCATGTAGTGATCAT 58.950 34.615 0.00 0.00 0.00 2.45
1570 2302 6.519679 AATTGTGTGCATGTAGTGATCATT 57.480 33.333 0.00 0.00 0.00 2.57
1571 2303 7.628769 AATTGTGTGCATGTAGTGATCATTA 57.371 32.000 0.00 0.00 0.00 1.90
1572 2304 7.628769 ATTGTGTGCATGTAGTGATCATTAA 57.371 32.000 0.00 0.00 0.00 1.40
1573 2305 7.446001 TTGTGTGCATGTAGTGATCATTAAA 57.554 32.000 0.00 0.00 0.00 1.52
1574 2306 7.628769 TGTGTGCATGTAGTGATCATTAAAT 57.371 32.000 0.00 0.00 0.00 1.40
1575 2307 8.054152 TGTGTGCATGTAGTGATCATTAAATT 57.946 30.769 0.00 0.00 0.00 1.82
1576 2308 8.183536 TGTGTGCATGTAGTGATCATTAAATTC 58.816 33.333 0.00 0.00 0.00 2.17
1577 2309 8.183536 GTGTGCATGTAGTGATCATTAAATTCA 58.816 33.333 0.00 0.00 0.00 2.57
1578 2310 8.905850 TGTGCATGTAGTGATCATTAAATTCAT 58.094 29.630 0.00 0.00 0.00 2.57
1579 2311 9.390795 GTGCATGTAGTGATCATTAAATTCATC 57.609 33.333 0.00 0.00 0.00 2.92
1580 2312 9.346005 TGCATGTAGTGATCATTAAATTCATCT 57.654 29.630 0.00 0.00 0.00 2.90
1581 2313 9.823098 GCATGTAGTGATCATTAAATTCATCTC 57.177 33.333 0.00 0.00 0.00 2.75
1664 2396 3.507622 GGCTCTTGCTCTTAAACACCAAT 59.492 43.478 0.00 0.00 39.59 3.16
1829 2562 0.525668 CGTCGTAGGCAAGGCTACTG 60.526 60.000 25.09 19.46 0.00 2.74
1853 2586 5.808540 GTGGTTTTTAGAGTGTGTTTTTCCC 59.191 40.000 0.00 0.00 0.00 3.97
1939 2672 2.416547 CTGGTAGTGGTTGCTGAAATCG 59.583 50.000 0.00 0.00 0.00 3.34
1955 2688 4.464951 TGAAATCGCAGGTTTACTCCTAGA 59.535 41.667 0.00 0.00 35.87 2.43
1956 2689 4.657436 AATCGCAGGTTTACTCCTAGAG 57.343 45.455 0.00 0.00 35.87 2.43
1957 2690 2.376109 TCGCAGGTTTACTCCTAGAGG 58.624 52.381 0.00 0.00 35.87 3.69
1958 2691 1.409427 CGCAGGTTTACTCCTAGAGGG 59.591 57.143 0.00 0.00 35.87 4.30
1999 2732 8.833231 AGATTTTGAGAATTCGTCAAACTCTA 57.167 30.769 27.88 17.92 45.12 2.43
2039 2772 5.063204 TCACGGTGAAGAAATTGAGACAAT 58.937 37.500 8.68 0.00 0.00 2.71
2119 2852 0.874390 ACGTGCAACCATACAAGCAG 59.126 50.000 0.00 0.00 37.72 4.24
2162 2895 7.597369 TGAACTGAAGAAATGAAAAGCATCATG 59.403 33.333 1.10 0.00 39.90 3.07
2188 2921 9.392021 GATGAAAGTCTTCAGTTCAAATTCTTC 57.608 33.333 0.00 0.00 44.68 2.87
2194 2927 8.960591 AGTCTTCAGTTCAAATTCTTCAGAAAA 58.039 29.630 0.00 0.00 37.61 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
170 171 4.378563 CGCATAAACACATACAAAACCGGA 60.379 41.667 9.46 0.00 0.00 5.14
193 194 6.563222 TTGTAAGTTAGTATGGTTGCCAAC 57.437 37.500 0.00 0.00 36.95 3.77
272 446 9.223099 GGTATTACACTGTTACAAATGTACCTT 57.777 33.333 8.18 0.00 0.00 3.50
339 513 1.334869 CTTTCTTTGTCTGCACGCCTT 59.665 47.619 0.00 0.00 0.00 4.35
345 519 2.498167 GCCTCTCTTTCTTTGTCTGCA 58.502 47.619 0.00 0.00 0.00 4.41
386 560 2.414559 CGGCAAACTTGAAGGCATACTG 60.415 50.000 0.00 0.00 0.00 2.74
393 567 1.247567 ACCATCGGCAAACTTGAAGG 58.752 50.000 0.00 0.00 0.00 3.46
395 1127 1.269517 GCAACCATCGGCAAACTTGAA 60.270 47.619 0.00 0.00 0.00 2.69
408 1140 1.097547 GCATGCTCTACGGCAACCAT 61.098 55.000 11.37 0.00 45.68 3.55
409 1141 1.745115 GCATGCTCTACGGCAACCA 60.745 57.895 11.37 0.00 45.68 3.67
410 1142 2.472909 GGCATGCTCTACGGCAACC 61.473 63.158 18.92 0.00 45.68 3.77
411 1143 2.472909 GGGCATGCTCTACGGCAAC 61.473 63.158 18.92 0.00 45.68 4.17
412 1144 2.124736 GGGCATGCTCTACGGCAA 60.125 61.111 18.92 0.00 45.68 4.52
413 1145 3.083349 AGGGCATGCTCTACGGCA 61.083 61.111 21.32 0.00 46.63 5.69
414 1146 2.590007 CAGGGCATGCTCTACGGC 60.590 66.667 22.32 0.00 0.00 5.68
415 1147 2.109799 CCAGGGCATGCTCTACGG 59.890 66.667 22.32 15.15 0.00 4.02
416 1148 1.227380 GTCCAGGGCATGCTCTACG 60.227 63.158 22.32 13.74 0.00 3.51
417 1149 1.227380 CGTCCAGGGCATGCTCTAC 60.227 63.158 22.32 15.32 0.00 2.59
418 1150 1.685765 ACGTCCAGGGCATGCTCTA 60.686 57.895 22.32 1.90 0.00 2.43
419 1151 3.005539 ACGTCCAGGGCATGCTCT 61.006 61.111 16.33 16.33 0.00 4.09
420 1152 2.821366 CACGTCCAGGGCATGCTC 60.821 66.667 18.92 15.06 0.00 4.26
421 1153 4.415150 CCACGTCCAGGGCATGCT 62.415 66.667 18.92 0.00 0.00 3.79
422 1154 3.704231 ATCCACGTCCAGGGCATGC 62.704 63.158 9.90 9.90 0.00 4.06
423 1155 1.820906 CATCCACGTCCAGGGCATG 60.821 63.158 0.00 0.00 0.00 4.06
424 1156 2.591753 CATCCACGTCCAGGGCAT 59.408 61.111 0.00 0.00 0.00 4.40
425 1157 3.716195 CCATCCACGTCCAGGGCA 61.716 66.667 0.00 0.00 0.00 5.36
426 1158 3.391665 CTCCATCCACGTCCAGGGC 62.392 68.421 0.00 0.00 0.00 5.19
427 1159 1.961180 GACTCCATCCACGTCCAGGG 61.961 65.000 0.00 0.00 0.00 4.45
428 1160 1.517832 GACTCCATCCACGTCCAGG 59.482 63.158 0.00 0.00 0.00 4.45
429 1161 1.139734 CGACTCCATCCACGTCCAG 59.860 63.158 0.00 0.00 0.00 3.86
430 1162 1.592400 GACGACTCCATCCACGTCCA 61.592 60.000 0.00 0.00 45.76 4.02
431 1163 1.139095 GACGACTCCATCCACGTCC 59.861 63.158 0.00 0.00 45.76 4.79
432 1164 4.787999 GACGACTCCATCCACGTC 57.212 61.111 0.00 0.00 45.51 4.34
433 1165 2.875485 CGACGACTCCATCCACGT 59.125 61.111 0.00 0.00 41.57 4.49
434 1166 2.579787 GCGACGACTCCATCCACG 60.580 66.667 0.00 0.00 0.00 4.94
435 1167 1.517257 CTGCGACGACTCCATCCAC 60.517 63.158 0.00 0.00 0.00 4.02
436 1168 0.678684 TACTGCGACGACTCCATCCA 60.679 55.000 0.00 0.00 0.00 3.41
437 1169 0.029567 CTACTGCGACGACTCCATCC 59.970 60.000 0.00 0.00 0.00 3.51
438 1170 0.592754 GCTACTGCGACGACTCCATC 60.593 60.000 0.00 0.00 0.00 3.51
439 1171 1.433879 GCTACTGCGACGACTCCAT 59.566 57.895 0.00 0.00 0.00 3.41
440 1172 2.875485 GCTACTGCGACGACTCCA 59.125 61.111 0.00 0.00 0.00 3.86
450 1182 2.170434 GCTCTTCTGCCGCTACTGC 61.170 63.158 0.00 0.00 0.00 4.40
451 1183 1.080995 GTGCTCTTCTGCCGCTACTG 61.081 60.000 0.00 0.00 0.00 2.74
452 1184 1.216710 GTGCTCTTCTGCCGCTACT 59.783 57.895 0.00 0.00 0.00 2.57
453 1185 1.811679 GGTGCTCTTCTGCCGCTAC 60.812 63.158 0.00 0.00 0.00 3.58
454 1186 1.984570 AGGTGCTCTTCTGCCGCTA 60.985 57.895 0.00 0.00 0.00 4.26
455 1187 3.317571 AGGTGCTCTTCTGCCGCT 61.318 61.111 0.00 0.00 0.00 5.52
456 1188 3.123620 CAGGTGCTCTTCTGCCGC 61.124 66.667 0.00 0.00 0.00 6.53
457 1189 2.435586 CCAGGTGCTCTTCTGCCG 60.436 66.667 0.00 0.00 0.00 5.69
458 1190 2.749441 GCCAGGTGCTCTTCTGCC 60.749 66.667 0.00 0.00 36.87 4.85
459 1191 2.749441 GGCCAGGTGCTCTTCTGC 60.749 66.667 0.00 0.00 40.92 4.26
460 1192 1.078567 GAGGCCAGGTGCTCTTCTG 60.079 63.158 5.01 0.00 40.92 3.02
461 1193 2.297129 GGAGGCCAGGTGCTCTTCT 61.297 63.158 5.01 0.00 40.92 2.85
462 1194 2.270527 GGAGGCCAGGTGCTCTTC 59.729 66.667 5.01 0.00 40.92 2.87
463 1195 2.530151 TGGAGGCCAGGTGCTCTT 60.530 61.111 5.01 0.00 40.92 2.85
472 1204 0.907486 CATCTTCTGTCTGGAGGCCA 59.093 55.000 5.01 0.00 0.00 5.36
473 1205 1.198713 TCATCTTCTGTCTGGAGGCC 58.801 55.000 0.00 0.00 0.00 5.19
474 1206 2.485124 CCATCATCTTCTGTCTGGAGGC 60.485 54.545 0.00 0.00 33.32 4.70
475 1207 2.770802 ACCATCATCTTCTGTCTGGAGG 59.229 50.000 0.00 0.00 34.69 4.30
476 1208 3.431905 CCACCATCATCTTCTGTCTGGAG 60.432 52.174 0.00 0.00 34.69 3.86
477 1209 2.502947 CCACCATCATCTTCTGTCTGGA 59.497 50.000 0.00 0.00 34.69 3.86
478 1210 2.915349 CCACCATCATCTTCTGTCTGG 58.085 52.381 0.00 0.00 35.88 3.86
479 1211 2.286872 GCCACCATCATCTTCTGTCTG 58.713 52.381 0.00 0.00 0.00 3.51
480 1212 1.134580 CGCCACCATCATCTTCTGTCT 60.135 52.381 0.00 0.00 0.00 3.41
481 1213 1.134699 TCGCCACCATCATCTTCTGTC 60.135 52.381 0.00 0.00 0.00 3.51
482 1214 0.904649 TCGCCACCATCATCTTCTGT 59.095 50.000 0.00 0.00 0.00 3.41
483 1215 1.293924 GTCGCCACCATCATCTTCTG 58.706 55.000 0.00 0.00 0.00 3.02
484 1216 0.904649 TGTCGCCACCATCATCTTCT 59.095 50.000 0.00 0.00 0.00 2.85
485 1217 1.398390 GTTGTCGCCACCATCATCTTC 59.602 52.381 0.00 0.00 0.00 2.87
486 1218 1.271325 TGTTGTCGCCACCATCATCTT 60.271 47.619 0.00 0.00 0.00 2.40
487 1219 0.324614 TGTTGTCGCCACCATCATCT 59.675 50.000 0.00 0.00 0.00 2.90
488 1220 0.447801 GTGTTGTCGCCACCATCATC 59.552 55.000 0.00 0.00 0.00 2.92
489 1221 1.298157 CGTGTTGTCGCCACCATCAT 61.298 55.000 0.00 0.00 0.00 2.45
490 1222 1.958715 CGTGTTGTCGCCACCATCA 60.959 57.895 0.00 0.00 0.00 3.07
491 1223 1.959226 ACGTGTTGTCGCCACCATC 60.959 57.895 0.00 0.00 0.00 3.51
492 1224 2.110213 ACGTGTTGTCGCCACCAT 59.890 55.556 0.00 0.00 0.00 3.55
493 1225 2.892914 CACGTGTTGTCGCCACCA 60.893 61.111 7.58 0.00 0.00 4.17
494 1226 2.893404 ACACGTGTTGTCGCCACC 60.893 61.111 17.22 0.00 29.79 4.61
495 1227 2.323105 CACACGTGTTGTCGCCAC 59.677 61.111 20.79 0.00 35.67 5.01
496 1228 2.125472 ACACACGTGTTGTCGCCA 60.125 55.556 20.79 0.00 41.83 5.69
505 1237 0.531090 TTTCTCCGGGAACACACGTG 60.531 55.000 15.48 15.48 33.13 4.49
506 1238 0.249741 CTTTCTCCGGGAACACACGT 60.250 55.000 0.00 0.00 33.13 4.49
507 1239 0.032952 TCTTTCTCCGGGAACACACG 59.967 55.000 0.00 0.00 33.13 4.49
508 1240 1.509703 GTCTTTCTCCGGGAACACAC 58.490 55.000 0.00 0.00 33.13 3.82
509 1241 0.032952 CGTCTTTCTCCGGGAACACA 59.967 55.000 0.00 0.00 33.13 3.72
510 1242 0.316204 TCGTCTTTCTCCGGGAACAC 59.684 55.000 0.00 3.13 33.13 3.32
511 1243 1.000506 CTTCGTCTTTCTCCGGGAACA 59.999 52.381 0.00 0.00 33.13 3.18
512 1244 1.711206 CTTCGTCTTTCTCCGGGAAC 58.289 55.000 0.00 0.00 33.13 3.62
513 1245 0.037605 GCTTCGTCTTTCTCCGGGAA 60.038 55.000 0.00 0.67 0.00 3.97
514 1246 0.898789 AGCTTCGTCTTTCTCCGGGA 60.899 55.000 0.00 0.00 0.00 5.14
515 1247 0.458716 GAGCTTCGTCTTTCTCCGGG 60.459 60.000 0.00 0.00 0.00 5.73
516 1248 0.458716 GGAGCTTCGTCTTTCTCCGG 60.459 60.000 0.00 0.00 36.18 5.14
517 1249 3.037485 GGAGCTTCGTCTTTCTCCG 57.963 57.895 0.00 0.00 36.18 4.63
518 1250 1.468395 CGAGGAGCTTCGTCTTTCTCC 60.468 57.143 0.00 0.00 44.09 3.71
519 1251 1.902840 CGAGGAGCTTCGTCTTTCTC 58.097 55.000 0.00 0.00 35.91 2.87
520 1252 0.109039 GCGAGGAGCTTCGTCTTTCT 60.109 55.000 9.41 0.00 44.04 2.52
521 1253 1.406970 CGCGAGGAGCTTCGTCTTTC 61.407 60.000 0.00 0.00 45.59 2.62
522 1254 1.444553 CGCGAGGAGCTTCGTCTTT 60.445 57.895 0.00 0.00 45.59 2.52
523 1255 2.179517 CGCGAGGAGCTTCGTCTT 59.820 61.111 0.00 0.00 45.59 3.01
524 1256 4.484258 GCGCGAGGAGCTTCGTCT 62.484 66.667 12.10 0.00 45.59 4.18
525 1257 4.484258 AGCGCGAGGAGCTTCGTC 62.484 66.667 12.10 3.35 43.24 4.20
532 1264 3.376935 ATGTGGGAAGCGCGAGGAG 62.377 63.158 12.10 0.00 0.00 3.69
533 1265 3.371097 GATGTGGGAAGCGCGAGGA 62.371 63.158 12.10 0.00 0.00 3.71
534 1266 2.892425 GATGTGGGAAGCGCGAGG 60.892 66.667 12.10 0.00 0.00 4.63
535 1267 3.257561 CGATGTGGGAAGCGCGAG 61.258 66.667 12.10 0.00 0.00 5.03
536 1268 4.063967 ACGATGTGGGAAGCGCGA 62.064 61.111 12.10 0.00 0.00 5.87
537 1269 3.853330 CACGATGTGGGAAGCGCG 61.853 66.667 0.00 0.00 0.00 6.86
546 1278 2.802667 GCACGCTAGCCACGATGTG 61.803 63.158 9.66 11.22 0.00 3.21
547 1279 2.509336 GCACGCTAGCCACGATGT 60.509 61.111 9.66 0.00 0.00 3.06
548 1280 1.884464 ATGCACGCTAGCCACGATG 60.884 57.895 9.66 1.30 0.00 3.84
549 1281 1.884464 CATGCACGCTAGCCACGAT 60.884 57.895 9.66 0.00 0.00 3.73
550 1282 2.296814 ATCATGCACGCTAGCCACGA 62.297 55.000 9.66 0.00 0.00 4.35
551 1283 1.884464 ATCATGCACGCTAGCCACG 60.884 57.895 9.66 0.00 0.00 4.94
552 1284 1.645455 CATCATGCACGCTAGCCAC 59.355 57.895 9.66 0.00 0.00 5.01
553 1285 1.524393 CCATCATGCACGCTAGCCA 60.524 57.895 9.66 1.33 0.00 4.75
554 1286 2.901292 GCCATCATGCACGCTAGCC 61.901 63.158 9.66 0.00 0.00 3.93
555 1287 2.635899 GCCATCATGCACGCTAGC 59.364 61.111 4.06 4.06 0.00 3.42
556 1288 2.601398 CCGCCATCATGCACGCTAG 61.601 63.158 0.00 0.00 0.00 3.42
557 1289 2.588596 CCGCCATCATGCACGCTA 60.589 61.111 0.00 0.00 0.00 4.26
560 1292 4.246206 CTGCCGCCATCATGCACG 62.246 66.667 0.00 0.00 0.00 5.34
561 1293 3.896133 CCTGCCGCCATCATGCAC 61.896 66.667 0.00 0.00 0.00 4.57
579 1311 2.303676 GGAAGCTAATCGCGAGCCG 61.304 63.158 16.66 5.93 45.59 5.52
580 1312 0.314302 TAGGAAGCTAATCGCGAGCC 59.686 55.000 16.66 6.95 45.59 4.70
581 1313 2.135664 TTAGGAAGCTAATCGCGAGC 57.864 50.000 16.66 13.26 45.59 5.03
582 1314 4.156190 TCCTATTAGGAAGCTAATCGCGAG 59.844 45.833 16.66 1.42 42.51 5.03
583 1315 4.077108 TCCTATTAGGAAGCTAATCGCGA 58.923 43.478 13.09 13.09 42.51 5.87
584 1316 4.436242 TCCTATTAGGAAGCTAATCGCG 57.564 45.455 10.10 0.00 42.51 5.87
593 1325 4.621747 GGACGCATCCATCCTATTAGGAAG 60.622 50.000 16.28 11.82 42.59 3.46
594 1326 3.260884 GGACGCATCCATCCTATTAGGAA 59.739 47.826 16.28 0.83 42.59 3.36
595 1327 2.832129 GGACGCATCCATCCTATTAGGA 59.168 50.000 14.77 14.77 45.47 2.94
596 1328 2.417379 CGGACGCATCCATCCTATTAGG 60.417 54.545 0.00 3.07 46.67 2.69
597 1329 2.492088 TCGGACGCATCCATCCTATTAG 59.508 50.000 0.00 0.00 46.67 1.73
598 1330 2.492088 CTCGGACGCATCCATCCTATTA 59.508 50.000 0.00 0.00 46.67 0.98
599 1331 1.273606 CTCGGACGCATCCATCCTATT 59.726 52.381 0.00 0.00 46.67 1.73
600 1332 0.891373 CTCGGACGCATCCATCCTAT 59.109 55.000 0.00 0.00 46.67 2.57
601 1333 0.179001 TCTCGGACGCATCCATCCTA 60.179 55.000 0.00 0.00 46.67 2.94
602 1334 0.829602 ATCTCGGACGCATCCATCCT 60.830 55.000 0.00 0.00 46.67 3.24
603 1335 0.888619 TATCTCGGACGCATCCATCC 59.111 55.000 0.00 0.00 46.67 3.51
604 1336 2.029828 ACTTATCTCGGACGCATCCATC 60.030 50.000 0.00 0.00 46.67 3.51
605 1337 1.964223 ACTTATCTCGGACGCATCCAT 59.036 47.619 0.00 0.00 46.67 3.41
606 1338 1.399714 ACTTATCTCGGACGCATCCA 58.600 50.000 0.00 0.00 46.67 3.41
607 1339 2.510768 AACTTATCTCGGACGCATCC 57.489 50.000 0.00 0.00 42.28 3.51
608 1340 4.859629 AAAAACTTATCTCGGACGCATC 57.140 40.909 0.00 0.00 0.00 3.91
626 1358 9.527157 TCTCACACAAATCCATCCTATTAAAAA 57.473 29.630 0.00 0.00 0.00 1.94
627 1359 9.699410 ATCTCACACAAATCCATCCTATTAAAA 57.301 29.630 0.00 0.00 0.00 1.52
628 1360 9.699410 AATCTCACACAAATCCATCCTATTAAA 57.301 29.630 0.00 0.00 0.00 1.52
631 1363 8.497745 ACTAATCTCACACAAATCCATCCTATT 58.502 33.333 0.00 0.00 0.00 1.73
632 1364 8.038862 ACTAATCTCACACAAATCCATCCTAT 57.961 34.615 0.00 0.00 0.00 2.57
633 1365 7.437713 ACTAATCTCACACAAATCCATCCTA 57.562 36.000 0.00 0.00 0.00 2.94
634 1366 6.319048 ACTAATCTCACACAAATCCATCCT 57.681 37.500 0.00 0.00 0.00 3.24
635 1367 7.396540 AAACTAATCTCACACAAATCCATCC 57.603 36.000 0.00 0.00 0.00 3.51
636 1368 8.734386 AGAAAACTAATCTCACACAAATCCATC 58.266 33.333 0.00 0.00 0.00 3.51
637 1369 8.641498 AGAAAACTAATCTCACACAAATCCAT 57.359 30.769 0.00 0.00 0.00 3.41
638 1370 9.567776 TTAGAAAACTAATCTCACACAAATCCA 57.432 29.630 0.00 0.00 0.00 3.41
655 1387 9.153479 AGACTGCATCTATCCTATTAGAAAACT 57.847 33.333 0.00 0.00 35.15 2.66
656 1388 9.202273 CAGACTGCATCTATCCTATTAGAAAAC 57.798 37.037 0.00 0.00 35.15 2.43
657 1389 9.147732 TCAGACTGCATCTATCCTATTAGAAAA 57.852 33.333 0.00 0.00 35.15 2.29
658 1390 8.712228 TCAGACTGCATCTATCCTATTAGAAA 57.288 34.615 0.00 0.00 35.15 2.52
659 1391 8.891985 ATCAGACTGCATCTATCCTATTAGAA 57.108 34.615 0.00 0.00 35.15 2.10
660 1392 8.891985 AATCAGACTGCATCTATCCTATTAGA 57.108 34.615 0.00 0.00 35.15 2.10
663 1395 9.099071 ACTAAATCAGACTGCATCTATCCTATT 57.901 33.333 0.00 0.00 35.15 1.73
664 1396 8.663209 ACTAAATCAGACTGCATCTATCCTAT 57.337 34.615 0.00 0.00 35.15 2.57
665 1397 8.484214 AACTAAATCAGACTGCATCTATCCTA 57.516 34.615 0.00 0.00 35.15 2.94
666 1398 6.992664 ACTAAATCAGACTGCATCTATCCT 57.007 37.500 0.00 0.00 35.15 3.24
667 1399 7.172361 GGAAACTAAATCAGACTGCATCTATCC 59.828 40.741 0.00 0.00 35.15 2.59
668 1400 7.930865 AGGAAACTAAATCAGACTGCATCTATC 59.069 37.037 0.00 0.00 40.61 2.08
669 1401 7.800092 AGGAAACTAAATCAGACTGCATCTAT 58.200 34.615 0.00 0.00 40.61 1.98
670 1402 7.187824 AGGAAACTAAATCAGACTGCATCTA 57.812 36.000 0.00 0.00 40.61 1.98
671 1403 6.059787 AGGAAACTAAATCAGACTGCATCT 57.940 37.500 0.00 0.00 40.61 2.90
672 1404 7.268586 TCTAGGAAACTAAATCAGACTGCATC 58.731 38.462 0.00 0.00 43.83 3.91
673 1405 7.187824 TCTAGGAAACTAAATCAGACTGCAT 57.812 36.000 0.00 0.00 43.83 3.96
674 1406 6.605471 TCTAGGAAACTAAATCAGACTGCA 57.395 37.500 0.00 0.00 43.83 4.41
675 1407 9.255304 CTATTCTAGGAAACTAAATCAGACTGC 57.745 37.037 0.00 0.00 43.83 4.40
701 1433 6.317391 GGAAGCTAATAATCATAGGTGCATCC 59.683 42.308 0.00 0.00 31.85 3.51
702 1434 7.108847 AGGAAGCTAATAATCATAGGTGCATC 58.891 38.462 0.00 0.00 31.85 3.91
703 1435 7.025520 AGGAAGCTAATAATCATAGGTGCAT 57.974 36.000 0.00 0.00 31.85 3.96
704 1436 6.439636 AGGAAGCTAATAATCATAGGTGCA 57.560 37.500 0.00 0.00 31.85 4.57
705 1437 9.454859 AATTAGGAAGCTAATAATCATAGGTGC 57.545 33.333 0.00 0.00 31.85 5.01
712 1444 9.342308 CCTGAACAATTAGGAAGCTAATAATCA 57.658 33.333 0.00 0.00 36.11 2.57
713 1445 8.293157 GCCTGAACAATTAGGAAGCTAATAATC 58.707 37.037 0.00 0.00 36.11 1.75
714 1446 7.041098 CGCCTGAACAATTAGGAAGCTAATAAT 60.041 37.037 0.00 0.00 36.11 1.28
715 1447 6.260050 CGCCTGAACAATTAGGAAGCTAATAA 59.740 38.462 0.00 0.00 36.11 1.40
716 1448 5.758296 CGCCTGAACAATTAGGAAGCTAATA 59.242 40.000 0.00 0.00 36.11 0.98
717 1449 4.576463 CGCCTGAACAATTAGGAAGCTAAT 59.424 41.667 0.00 0.00 36.11 1.73
718 1450 3.938963 CGCCTGAACAATTAGGAAGCTAA 59.061 43.478 0.00 0.00 36.11 3.09
719 1451 3.055385 ACGCCTGAACAATTAGGAAGCTA 60.055 43.478 0.00 0.00 36.11 3.32
720 1452 2.290323 ACGCCTGAACAATTAGGAAGCT 60.290 45.455 0.00 0.00 36.11 3.74
721 1453 2.084546 ACGCCTGAACAATTAGGAAGC 58.915 47.619 0.00 0.00 36.11 3.86
722 1454 2.420022 CCACGCCTGAACAATTAGGAAG 59.580 50.000 0.00 0.00 36.11 3.46
723 1455 2.039216 TCCACGCCTGAACAATTAGGAA 59.961 45.455 0.00 0.00 36.11 3.36
724 1456 1.626321 TCCACGCCTGAACAATTAGGA 59.374 47.619 0.00 0.00 36.11 2.94
725 1457 2.009774 CTCCACGCCTGAACAATTAGG 58.990 52.381 0.00 0.00 37.14 2.69
726 1458 2.699954 ACTCCACGCCTGAACAATTAG 58.300 47.619 0.00 0.00 0.00 1.73
727 1459 2.851263 ACTCCACGCCTGAACAATTA 57.149 45.000 0.00 0.00 0.00 1.40
728 1460 1.981256 AACTCCACGCCTGAACAATT 58.019 45.000 0.00 0.00 0.00 2.32
729 1461 1.880027 GAAACTCCACGCCTGAACAAT 59.120 47.619 0.00 0.00 0.00 2.71
730 1462 1.305201 GAAACTCCACGCCTGAACAA 58.695 50.000 0.00 0.00 0.00 2.83
731 1463 0.179234 TGAAACTCCACGCCTGAACA 59.821 50.000 0.00 0.00 0.00 3.18
732 1464 1.523758 ATGAAACTCCACGCCTGAAC 58.476 50.000 0.00 0.00 0.00 3.18
733 1465 3.627395 ATATGAAACTCCACGCCTGAA 57.373 42.857 0.00 0.00 0.00 3.02
734 1466 3.627395 AATATGAAACTCCACGCCTGA 57.373 42.857 0.00 0.00 0.00 3.86
735 1467 4.438744 GGAAAATATGAAACTCCACGCCTG 60.439 45.833 0.00 0.00 0.00 4.85
736 1468 3.694566 GGAAAATATGAAACTCCACGCCT 59.305 43.478 0.00 0.00 0.00 5.52
737 1469 3.694566 AGGAAAATATGAAACTCCACGCC 59.305 43.478 0.00 0.00 0.00 5.68
738 1470 4.201920 GGAGGAAAATATGAAACTCCACGC 60.202 45.833 0.00 0.00 43.02 5.34
739 1471 4.941263 TGGAGGAAAATATGAAACTCCACG 59.059 41.667 12.77 0.00 46.79 4.94
742 1474 4.335594 CCGTGGAGGAAAATATGAAACTCC 59.664 45.833 0.00 0.00 45.00 3.85
743 1475 4.941873 ACCGTGGAGGAAAATATGAAACTC 59.058 41.667 0.00 0.00 45.00 3.01
744 1476 4.700213 CACCGTGGAGGAAAATATGAAACT 59.300 41.667 0.00 0.00 45.00 2.66
745 1477 4.142469 CCACCGTGGAGGAAAATATGAAAC 60.142 45.833 12.68 0.00 45.00 2.78
746 1478 4.013728 CCACCGTGGAGGAAAATATGAAA 58.986 43.478 12.68 0.00 45.00 2.69
747 1479 3.264706 TCCACCGTGGAGGAAAATATGAA 59.735 43.478 16.73 0.00 42.67 2.57
748 1480 2.841266 TCCACCGTGGAGGAAAATATGA 59.159 45.455 16.73 0.00 42.67 2.15
749 1481 3.275617 TCCACCGTGGAGGAAAATATG 57.724 47.619 16.73 0.00 42.67 1.78
759 1491 1.973281 GACCGTACTCCACCGTGGA 60.973 63.158 19.39 19.39 45.98 4.02
760 1492 2.209064 CTGACCGTACTCCACCGTGG 62.209 65.000 11.73 11.73 39.43 4.94
761 1493 1.211969 CTGACCGTACTCCACCGTG 59.788 63.158 0.00 0.00 0.00 4.94
762 1494 1.228367 ACTGACCGTACTCCACCGT 60.228 57.895 0.00 0.00 0.00 4.83
763 1495 1.239296 TGACTGACCGTACTCCACCG 61.239 60.000 0.00 0.00 0.00 4.94
764 1496 0.963962 TTGACTGACCGTACTCCACC 59.036 55.000 0.00 0.00 0.00 4.61
765 1497 2.029290 ACATTGACTGACCGTACTCCAC 60.029 50.000 0.00 0.00 0.00 4.02
766 1498 2.244695 ACATTGACTGACCGTACTCCA 58.755 47.619 0.00 0.00 0.00 3.86
767 1499 4.445452 TTACATTGACTGACCGTACTCC 57.555 45.455 0.00 0.00 0.00 3.85
768 1500 6.672357 GCAATTTACATTGACTGACCGTACTC 60.672 42.308 5.78 0.00 42.35 2.59
769 1501 5.121768 GCAATTTACATTGACTGACCGTACT 59.878 40.000 5.78 0.00 42.35 2.73
770 1502 5.121768 AGCAATTTACATTGACTGACCGTAC 59.878 40.000 5.78 0.00 42.35 3.67
771 1503 5.242434 AGCAATTTACATTGACTGACCGTA 58.758 37.500 5.78 0.00 42.35 4.02
772 1504 4.072131 AGCAATTTACATTGACTGACCGT 58.928 39.130 5.78 0.00 42.35 4.83
773 1505 4.685169 AGCAATTTACATTGACTGACCG 57.315 40.909 5.78 0.00 42.35 4.79
774 1506 7.023575 CACTTAGCAATTTACATTGACTGACC 58.976 38.462 5.78 0.00 42.35 4.02
775 1507 6.524586 GCACTTAGCAATTTACATTGACTGAC 59.475 38.462 5.78 0.00 42.35 3.51
776 1508 6.611381 GCACTTAGCAATTTACATTGACTGA 58.389 36.000 5.78 0.00 42.35 3.41
777 1509 6.859715 GCACTTAGCAATTTACATTGACTG 57.140 37.500 5.78 0.00 42.35 3.51
792 1524 3.568538 CCATTTTCTGTGTGCACTTAGC 58.431 45.455 19.41 6.38 45.96 3.09
793 1525 3.569701 ACCCATTTTCTGTGTGCACTTAG 59.430 43.478 19.41 15.55 0.00 2.18
794 1526 3.561143 ACCCATTTTCTGTGTGCACTTA 58.439 40.909 19.41 5.91 0.00 2.24
795 1527 2.387757 ACCCATTTTCTGTGTGCACTT 58.612 42.857 19.41 0.00 0.00 3.16
796 1528 2.071778 ACCCATTTTCTGTGTGCACT 57.928 45.000 19.41 0.00 0.00 4.40
797 1529 2.888834 AACCCATTTTCTGTGTGCAC 57.111 45.000 10.75 10.75 0.00 4.57
798 1530 2.890311 CCTAACCCATTTTCTGTGTGCA 59.110 45.455 0.00 0.00 0.00 4.57
799 1531 2.890945 ACCTAACCCATTTTCTGTGTGC 59.109 45.455 0.00 0.00 0.00 4.57
800 1532 6.294508 CCTTAACCTAACCCATTTTCTGTGTG 60.295 42.308 0.00 0.00 0.00 3.82
801 1533 5.773176 CCTTAACCTAACCCATTTTCTGTGT 59.227 40.000 0.00 0.00 0.00 3.72
802 1534 5.336451 GCCTTAACCTAACCCATTTTCTGTG 60.336 44.000 0.00 0.00 0.00 3.66
803 1535 4.770531 GCCTTAACCTAACCCATTTTCTGT 59.229 41.667 0.00 0.00 0.00 3.41
804 1536 5.016831 AGCCTTAACCTAACCCATTTTCTG 58.983 41.667 0.00 0.00 0.00 3.02
805 1537 5.270979 AGCCTTAACCTAACCCATTTTCT 57.729 39.130 0.00 0.00 0.00 2.52
806 1538 6.860080 GTTAGCCTTAACCTAACCCATTTTC 58.140 40.000 8.91 0.00 38.98 2.29
807 1539 6.845758 GTTAGCCTTAACCTAACCCATTTT 57.154 37.500 8.91 0.00 38.98 1.82
819 1551 7.549615 AATCAATCTAACGGTTAGCCTTAAC 57.450 36.000 20.49 0.00 38.74 2.01
820 1552 8.570068 AAAATCAATCTAACGGTTAGCCTTAA 57.430 30.769 20.49 5.96 33.23 1.85
821 1553 9.101655 GTAAAATCAATCTAACGGTTAGCCTTA 57.898 33.333 20.49 6.30 33.23 2.69
822 1554 7.827729 AGTAAAATCAATCTAACGGTTAGCCTT 59.172 33.333 20.49 13.97 33.23 4.35
823 1555 7.280205 CAGTAAAATCAATCTAACGGTTAGCCT 59.720 37.037 20.49 9.37 33.23 4.58
824 1556 7.407337 CAGTAAAATCAATCTAACGGTTAGCC 58.593 38.462 20.49 0.00 33.23 3.93
825 1557 7.407337 CCAGTAAAATCAATCTAACGGTTAGC 58.593 38.462 20.49 5.20 33.23 3.09
826 1558 7.466860 GCCCAGTAAAATCAATCTAACGGTTAG 60.467 40.741 19.49 19.49 34.52 2.34
827 1559 6.316890 GCCCAGTAAAATCAATCTAACGGTTA 59.683 38.462 0.00 0.00 0.00 2.85
828 1560 5.124936 GCCCAGTAAAATCAATCTAACGGTT 59.875 40.000 0.00 0.00 0.00 4.44
829 1561 4.638865 GCCCAGTAAAATCAATCTAACGGT 59.361 41.667 0.00 0.00 0.00 4.83
830 1562 4.036380 GGCCCAGTAAAATCAATCTAACGG 59.964 45.833 0.00 0.00 0.00 4.44
831 1563 4.881850 AGGCCCAGTAAAATCAATCTAACG 59.118 41.667 0.00 0.00 0.00 3.18
832 1564 7.875327 TTAGGCCCAGTAAAATCAATCTAAC 57.125 36.000 0.00 0.00 0.00 2.34
833 1565 7.444183 CGATTAGGCCCAGTAAAATCAATCTAA 59.556 37.037 0.00 0.00 0.00 2.10
834 1566 6.934645 CGATTAGGCCCAGTAAAATCAATCTA 59.065 38.462 0.00 0.00 0.00 1.98
835 1567 5.765182 CGATTAGGCCCAGTAAAATCAATCT 59.235 40.000 0.00 0.00 0.00 2.40
836 1568 5.531287 ACGATTAGGCCCAGTAAAATCAATC 59.469 40.000 0.00 0.00 0.00 2.67
837 1569 5.299279 CACGATTAGGCCCAGTAAAATCAAT 59.701 40.000 0.00 0.00 0.00 2.57
838 1570 4.638421 CACGATTAGGCCCAGTAAAATCAA 59.362 41.667 0.00 0.00 0.00 2.57
839 1571 4.196193 CACGATTAGGCCCAGTAAAATCA 58.804 43.478 0.00 0.00 0.00 2.57
840 1572 3.003378 GCACGATTAGGCCCAGTAAAATC 59.997 47.826 0.00 0.00 0.00 2.17
841 1573 2.949644 GCACGATTAGGCCCAGTAAAAT 59.050 45.455 0.00 0.00 0.00 1.82
842 1574 2.361789 GCACGATTAGGCCCAGTAAAA 58.638 47.619 0.00 0.00 0.00 1.52
843 1575 1.741055 CGCACGATTAGGCCCAGTAAA 60.741 52.381 0.00 0.00 0.00 2.01
844 1576 0.179094 CGCACGATTAGGCCCAGTAA 60.179 55.000 0.00 0.00 0.00 2.24
845 1577 1.440060 CGCACGATTAGGCCCAGTA 59.560 57.895 0.00 0.00 0.00 2.74
846 1578 2.186903 CGCACGATTAGGCCCAGT 59.813 61.111 0.00 0.00 0.00 4.00
847 1579 2.588877 CCGCACGATTAGGCCCAG 60.589 66.667 0.00 0.00 0.00 4.45
848 1580 2.961893 AACCGCACGATTAGGCCCA 61.962 57.895 0.00 0.00 0.00 5.36
849 1581 2.124860 AACCGCACGATTAGGCCC 60.125 61.111 0.00 0.00 0.00 5.80
850 1582 0.460635 TACAACCGCACGATTAGGCC 60.461 55.000 0.00 0.00 0.00 5.19
851 1583 1.578583 ATACAACCGCACGATTAGGC 58.421 50.000 0.00 0.00 0.00 3.93
852 1584 2.286833 CCAATACAACCGCACGATTAGG 59.713 50.000 0.00 0.00 0.00 2.69
853 1585 3.191669 TCCAATACAACCGCACGATTAG 58.808 45.455 0.00 0.00 0.00 1.73
854 1586 3.248495 TCCAATACAACCGCACGATTA 57.752 42.857 0.00 0.00 0.00 1.75
855 1587 2.102070 TCCAATACAACCGCACGATT 57.898 45.000 0.00 0.00 0.00 3.34
856 1588 2.158957 AGATCCAATACAACCGCACGAT 60.159 45.455 0.00 0.00 0.00 3.73
857 1589 1.206132 AGATCCAATACAACCGCACGA 59.794 47.619 0.00 0.00 0.00 4.35
858 1590 1.327460 CAGATCCAATACAACCGCACG 59.673 52.381 0.00 0.00 0.00 5.34
859 1591 2.095853 CACAGATCCAATACAACCGCAC 59.904 50.000 0.00 0.00 0.00 5.34
860 1592 2.290008 ACACAGATCCAATACAACCGCA 60.290 45.455 0.00 0.00 0.00 5.69
861 1593 2.356135 ACACAGATCCAATACAACCGC 58.644 47.619 0.00 0.00 0.00 5.68
862 1594 3.550275 CGTACACAGATCCAATACAACCG 59.450 47.826 0.00 0.00 0.00 4.44
863 1595 3.308866 GCGTACACAGATCCAATACAACC 59.691 47.826 0.00 0.00 0.00 3.77
864 1596 4.181578 AGCGTACACAGATCCAATACAAC 58.818 43.478 0.00 0.00 0.00 3.32
865 1597 4.465632 AGCGTACACAGATCCAATACAA 57.534 40.909 0.00 0.00 0.00 2.41
866 1598 4.465632 AAGCGTACACAGATCCAATACA 57.534 40.909 0.00 0.00 0.00 2.29
867 1599 4.630069 ACAAAGCGTACACAGATCCAATAC 59.370 41.667 0.00 0.00 0.00 1.89
868 1600 4.629634 CACAAAGCGTACACAGATCCAATA 59.370 41.667 0.00 0.00 0.00 1.90
869 1601 3.436704 CACAAAGCGTACACAGATCCAAT 59.563 43.478 0.00 0.00 0.00 3.16
870 1602 2.805671 CACAAAGCGTACACAGATCCAA 59.194 45.455 0.00 0.00 0.00 3.53
871 1603 2.412870 CACAAAGCGTACACAGATCCA 58.587 47.619 0.00 0.00 0.00 3.41
872 1604 1.732259 CCACAAAGCGTACACAGATCC 59.268 52.381 0.00 0.00 0.00 3.36
873 1605 1.732259 CCCACAAAGCGTACACAGATC 59.268 52.381 0.00 0.00 0.00 2.75
874 1606 1.610624 CCCCACAAAGCGTACACAGAT 60.611 52.381 0.00 0.00 0.00 2.90
875 1607 0.250124 CCCCACAAAGCGTACACAGA 60.250 55.000 0.00 0.00 0.00 3.41
876 1608 0.534203 ACCCCACAAAGCGTACACAG 60.534 55.000 0.00 0.00 0.00 3.66
877 1609 0.816018 CACCCCACAAAGCGTACACA 60.816 55.000 0.00 0.00 0.00 3.72
878 1610 0.816421 ACACCCCACAAAGCGTACAC 60.816 55.000 0.00 0.00 0.00 2.90
879 1611 0.816018 CACACCCCACAAAGCGTACA 60.816 55.000 0.00 0.00 0.00 2.90
880 1612 1.946267 CACACCCCACAAAGCGTAC 59.054 57.895 0.00 0.00 0.00 3.67
881 1613 1.894756 GCACACCCCACAAAGCGTA 60.895 57.895 0.00 0.00 0.00 4.42
882 1614 3.216292 GCACACCCCACAAAGCGT 61.216 61.111 0.00 0.00 0.00 5.07
883 1615 1.169661 TAAGCACACCCCACAAAGCG 61.170 55.000 0.00 0.00 0.00 4.68
884 1616 1.036707 TTAAGCACACCCCACAAAGC 58.963 50.000 0.00 0.00 0.00 3.51
885 1617 3.810310 TTTTAAGCACACCCCACAAAG 57.190 42.857 0.00 0.00 0.00 2.77
931 1663 8.688151 GCCTCTCTTTCTTTGTCTTCTATACTA 58.312 37.037 0.00 0.00 0.00 1.82
932 1664 7.552459 GCCTCTCTTTCTTTGTCTTCTATACT 58.448 38.462 0.00 0.00 0.00 2.12
933 1665 6.474102 CGCCTCTCTTTCTTTGTCTTCTATAC 59.526 42.308 0.00 0.00 0.00 1.47
934 1666 6.405953 CCGCCTCTCTTTCTTTGTCTTCTATA 60.406 42.308 0.00 0.00 0.00 1.31
935 1667 5.415221 CGCCTCTCTTTCTTTGTCTTCTAT 58.585 41.667 0.00 0.00 0.00 1.98
936 1668 4.322049 CCGCCTCTCTTTCTTTGTCTTCTA 60.322 45.833 0.00 0.00 0.00 2.10
937 1669 3.556004 CCGCCTCTCTTTCTTTGTCTTCT 60.556 47.826 0.00 0.00 0.00 2.85
938 1670 2.739379 CCGCCTCTCTTTCTTTGTCTTC 59.261 50.000 0.00 0.00 0.00 2.87
939 1671 2.104963 ACCGCCTCTCTTTCTTTGTCTT 59.895 45.455 0.00 0.00 0.00 3.01
940 1672 1.694696 ACCGCCTCTCTTTCTTTGTCT 59.305 47.619 0.00 0.00 0.00 3.41
941 1673 1.801178 CACCGCCTCTCTTTCTTTGTC 59.199 52.381 0.00 0.00 0.00 3.18
942 1674 1.884235 CACCGCCTCTCTTTCTTTGT 58.116 50.000 0.00 0.00 0.00 2.83
943 1675 0.519077 GCACCGCCTCTCTTTCTTTG 59.481 55.000 0.00 0.00 0.00 2.77
944 1676 0.108585 TGCACCGCCTCTCTTTCTTT 59.891 50.000 0.00 0.00 0.00 2.52
945 1677 0.108585 TTGCACCGCCTCTCTTTCTT 59.891 50.000 0.00 0.00 0.00 2.52
946 1678 0.108585 TTTGCACCGCCTCTCTTTCT 59.891 50.000 0.00 0.00 0.00 2.52
947 1679 1.168714 ATTTGCACCGCCTCTCTTTC 58.831 50.000 0.00 0.00 0.00 2.62
948 1680 2.489938 TATTTGCACCGCCTCTCTTT 57.510 45.000 0.00 0.00 0.00 2.52
949 1681 2.359900 CTTATTTGCACCGCCTCTCTT 58.640 47.619 0.00 0.00 0.00 2.85
950 1682 1.407437 CCTTATTTGCACCGCCTCTCT 60.407 52.381 0.00 0.00 0.00 3.10
951 1683 1.017387 CCTTATTTGCACCGCCTCTC 58.983 55.000 0.00 0.00 0.00 3.20
952 1684 1.032114 GCCTTATTTGCACCGCCTCT 61.032 55.000 0.00 0.00 0.00 3.69
953 1685 1.433471 GCCTTATTTGCACCGCCTC 59.567 57.895 0.00 0.00 0.00 4.70
954 1686 2.052104 GGCCTTATTTGCACCGCCT 61.052 57.895 0.00 0.00 33.50 5.52
955 1687 1.604147 AAGGCCTTATTTGCACCGCC 61.604 55.000 18.87 0.00 36.62 6.13
956 1688 1.099689 TAAGGCCTTATTTGCACCGC 58.900 50.000 21.68 0.00 0.00 5.68
957 1689 3.057174 TGTTTAAGGCCTTATTTGCACCG 60.057 43.478 25.70 0.00 0.00 4.94
958 1690 4.021456 ACTGTTTAAGGCCTTATTTGCACC 60.021 41.667 25.70 3.93 0.00 5.01
959 1691 5.134202 ACTGTTTAAGGCCTTATTTGCAC 57.866 39.130 25.70 16.39 0.00 4.57
960 1692 6.627065 GCATACTGTTTAAGGCCTTATTTGCA 60.627 38.462 25.70 18.61 0.00 4.08
961 1693 5.748630 GCATACTGTTTAAGGCCTTATTTGC 59.251 40.000 25.70 20.62 0.00 3.68
962 1694 6.273071 GGCATACTGTTTAAGGCCTTATTTG 58.727 40.000 25.70 15.59 38.37 2.32
963 1695 6.465439 GGCATACTGTTTAAGGCCTTATTT 57.535 37.500 25.70 10.78 38.37 1.40
969 1701 3.352648 TGAAGGCATACTGTTTAAGGCC 58.647 45.455 0.00 0.00 41.65 5.19
970 1702 4.459337 ACTTGAAGGCATACTGTTTAAGGC 59.541 41.667 0.00 0.00 0.00 4.35
971 1703 6.575162 AACTTGAAGGCATACTGTTTAAGG 57.425 37.500 0.00 0.00 0.00 2.69
972 1704 6.363357 GCAAACTTGAAGGCATACTGTTTAAG 59.637 38.462 0.00 0.00 0.00 1.85
973 1705 6.212955 GCAAACTTGAAGGCATACTGTTTAA 58.787 36.000 0.00 0.00 0.00 1.52
974 1706 5.278758 GGCAAACTTGAAGGCATACTGTTTA 60.279 40.000 0.00 0.00 0.00 2.01
975 1707 4.501400 GGCAAACTTGAAGGCATACTGTTT 60.501 41.667 0.00 0.00 0.00 2.83
976 1708 3.005791 GGCAAACTTGAAGGCATACTGTT 59.994 43.478 0.00 0.00 0.00 3.16
977 1709 2.558359 GGCAAACTTGAAGGCATACTGT 59.442 45.455 0.00 0.00 0.00 3.55
978 1710 2.414559 CGGCAAACTTGAAGGCATACTG 60.415 50.000 0.00 0.00 0.00 2.74
979 1711 1.812571 CGGCAAACTTGAAGGCATACT 59.187 47.619 0.00 0.00 0.00 2.12
980 1712 1.810151 TCGGCAAACTTGAAGGCATAC 59.190 47.619 0.00 0.00 0.00 2.39
981 1713 2.192664 TCGGCAAACTTGAAGGCATA 57.807 45.000 0.00 0.00 0.00 3.14
982 1714 1.203052 CATCGGCAAACTTGAAGGCAT 59.797 47.619 0.00 0.00 0.00 4.40
983 1715 0.597568 CATCGGCAAACTTGAAGGCA 59.402 50.000 0.00 0.00 0.00 4.75
984 1716 0.109132 CCATCGGCAAACTTGAAGGC 60.109 55.000 0.00 0.00 0.00 4.35
985 1717 1.247567 ACCATCGGCAAACTTGAAGG 58.752 50.000 0.00 0.00 0.00 3.46
986 1718 2.664916 CAACCATCGGCAAACTTGAAG 58.335 47.619 0.00 0.00 0.00 3.02
987 1719 1.269517 GCAACCATCGGCAAACTTGAA 60.270 47.619 0.00 0.00 0.00 2.69
988 1720 0.313672 GCAACCATCGGCAAACTTGA 59.686 50.000 0.00 0.00 0.00 3.02
989 1721 0.667184 GGCAACCATCGGCAAACTTG 60.667 55.000 0.00 0.00 0.00 3.16
990 1722 1.665442 GGCAACCATCGGCAAACTT 59.335 52.632 0.00 0.00 0.00 2.66
991 1723 2.625823 CGGCAACCATCGGCAAACT 61.626 57.895 0.00 0.00 0.00 2.66
992 1724 1.579084 TACGGCAACCATCGGCAAAC 61.579 55.000 0.00 0.00 0.00 2.93
993 1725 1.302383 CTACGGCAACCATCGGCAAA 61.302 55.000 0.00 0.00 0.00 3.68
994 1726 1.743623 CTACGGCAACCATCGGCAA 60.744 57.895 0.00 0.00 0.00 4.52
1314 2046 2.420022 CCACGCCTGAACAATTAGGAAG 59.580 50.000 0.00 0.00 36.11 3.46
1325 2057 3.627395 ATATGAAACTCCACGCCTGAA 57.373 42.857 0.00 0.00 0.00 3.02
1447 2179 2.428491 TCCAATACAACCGCACGATTT 58.572 42.857 0.00 0.00 0.00 2.17
1537 2269 9.410556 ACTACATGCACACAATTAGAAAAATTC 57.589 29.630 0.00 0.00 0.00 2.17
1538 2270 9.195411 CACTACATGCACACAATTAGAAAAATT 57.805 29.630 0.00 0.00 0.00 1.82
1540 2272 7.935520 TCACTACATGCACACAATTAGAAAAA 58.064 30.769 0.00 0.00 0.00 1.94
1541 2273 7.503521 TCACTACATGCACACAATTAGAAAA 57.496 32.000 0.00 0.00 0.00 2.29
1542 2274 7.390162 TGATCACTACATGCACACAATTAGAAA 59.610 33.333 0.00 0.00 0.00 2.52
1543 2275 6.878389 TGATCACTACATGCACACAATTAGAA 59.122 34.615 0.00 0.00 0.00 2.10
1544 2276 6.405538 TGATCACTACATGCACACAATTAGA 58.594 36.000 0.00 0.00 0.00 2.10
1545 2277 6.667007 TGATCACTACATGCACACAATTAG 57.333 37.500 0.00 0.00 0.00 1.73
1546 2278 7.628769 AATGATCACTACATGCACACAATTA 57.371 32.000 0.00 0.00 0.00 1.40
1547 2279 6.519679 AATGATCACTACATGCACACAATT 57.480 33.333 0.00 0.00 0.00 2.32
1548 2280 7.628769 TTAATGATCACTACATGCACACAAT 57.371 32.000 0.00 0.00 0.00 2.71
1549 2281 7.446001 TTTAATGATCACTACATGCACACAA 57.554 32.000 0.00 0.00 0.00 3.33
1550 2282 7.628769 ATTTAATGATCACTACATGCACACA 57.371 32.000 0.00 0.00 0.00 3.72
1551 2283 8.183536 TGAATTTAATGATCACTACATGCACAC 58.816 33.333 0.00 0.00 0.00 3.82
1552 2284 8.278729 TGAATTTAATGATCACTACATGCACA 57.721 30.769 0.00 0.00 0.00 4.57
1553 2285 9.390795 GATGAATTTAATGATCACTACATGCAC 57.609 33.333 0.00 0.00 0.00 4.57
1554 2286 9.346005 AGATGAATTTAATGATCACTACATGCA 57.654 29.630 0.00 0.00 0.00 3.96
1555 2287 9.823098 GAGATGAATTTAATGATCACTACATGC 57.177 33.333 0.00 0.00 0.00 4.06
1561 2293 9.458727 ACACTTGAGATGAATTTAATGATCACT 57.541 29.630 0.00 0.00 0.00 3.41
1570 2302 9.219603 CCAGTAAGAACACTTGAGATGAATTTA 57.780 33.333 0.00 0.00 0.00 1.40
1571 2303 7.939039 TCCAGTAAGAACACTTGAGATGAATTT 59.061 33.333 0.00 0.00 0.00 1.82
1572 2304 7.389053 GTCCAGTAAGAACACTTGAGATGAATT 59.611 37.037 0.00 0.00 0.00 2.17
1573 2305 6.876257 GTCCAGTAAGAACACTTGAGATGAAT 59.124 38.462 0.00 0.00 0.00 2.57
1574 2306 6.042093 AGTCCAGTAAGAACACTTGAGATGAA 59.958 38.462 0.00 0.00 0.00 2.57
1575 2307 5.540337 AGTCCAGTAAGAACACTTGAGATGA 59.460 40.000 0.00 0.00 0.00 2.92
1576 2308 5.636965 CAGTCCAGTAAGAACACTTGAGATG 59.363 44.000 0.00 0.00 0.00 2.90
1577 2309 5.279708 CCAGTCCAGTAAGAACACTTGAGAT 60.280 44.000 0.00 0.00 0.00 2.75
1578 2310 4.039245 CCAGTCCAGTAAGAACACTTGAGA 59.961 45.833 0.00 0.00 0.00 3.27
1579 2311 4.202264 ACCAGTCCAGTAAGAACACTTGAG 60.202 45.833 0.00 0.00 0.00 3.02
1580 2312 3.709653 ACCAGTCCAGTAAGAACACTTGA 59.290 43.478 0.00 0.00 0.00 3.02
1581 2313 4.073293 ACCAGTCCAGTAAGAACACTTG 57.927 45.455 0.00 0.00 0.00 3.16
1582 2314 5.881923 TTACCAGTCCAGTAAGAACACTT 57.118 39.130 0.00 0.00 0.00 3.16
1583 2315 7.735326 ATATTACCAGTCCAGTAAGAACACT 57.265 36.000 0.00 0.00 33.43 3.55
1793 2526 2.901264 CGACGAGTGTAGACGAGAAAAC 59.099 50.000 0.00 0.00 0.00 2.43
1829 2562 5.808540 GGGAAAAACACACTCTAAAAACCAC 59.191 40.000 0.00 0.00 0.00 4.16
1853 2586 6.368791 TCAAAGATCCTCTTAAACGATGTGTG 59.631 38.462 0.00 0.00 35.27 3.82
1860 2593 5.399858 TCTCGTCAAAGATCCTCTTAAACG 58.600 41.667 13.47 13.47 41.66 3.60
1886 2619 4.984161 AGTTTGATGATTGTTTTTCGCCAG 59.016 37.500 0.00 0.00 0.00 4.85
1939 2672 2.748388 TCCCTCTAGGAGTAAACCTGC 58.252 52.381 0.00 0.00 40.93 4.85
1999 2732 2.480419 CGTGATCTTCGCCAAAGTCTTT 59.520 45.455 0.00 0.00 36.31 2.52
2039 2772 6.590234 TTCTGTGATGAACTAGTCTTGCTA 57.410 37.500 0.00 0.00 0.00 3.49
2095 2828 1.518325 TGTATGGTTGCACGTCCTTG 58.482 50.000 0.00 0.00 0.00 3.61
2119 2852 4.569966 CAGTTCATCTTGAGTATGCCTGAC 59.430 45.833 0.00 0.00 30.72 3.51
2162 2895 9.392021 GAAGAATTTGAACTGAAGACTTTCATC 57.608 33.333 0.00 0.00 42.19 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.