Multiple sequence alignment - TraesCS7A01G034600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G034600 chr7A 100.000 5266 0 0 1 5266 15084842 15090107 0.000000e+00 9725.0
1 TraesCS7A01G034600 chr7A 84.183 2472 331 33 789 3236 15099680 15102115 0.000000e+00 2344.0
2 TraesCS7A01G034600 chr7A 77.382 1742 343 35 811 2519 18844037 18842314 0.000000e+00 987.0
3 TraesCS7A01G034600 chr7A 88.147 734 85 2 2204 2936 15214719 15215451 0.000000e+00 872.0
4 TraesCS7A01G034600 chr7A 82.609 667 92 8 2941 3606 15218799 15219442 7.650000e-158 568.0
5 TraesCS7A01G034600 chr7A 83.533 334 47 8 3277 3606 15102115 15102444 6.630000e-79 305.0
6 TraesCS7A01G034600 chr7A 78.873 284 44 11 4149 4429 15220030 15220300 1.510000e-40 178.0
7 TraesCS7A01G034600 chr7A 86.179 123 15 2 452 573 17425802 17425681 1.190000e-26 132.0
8 TraesCS7A01G034600 chr7A 86.667 120 13 3 455 573 17867723 17867606 4.280000e-26 130.0
9 TraesCS7A01G034600 chr7D 91.034 3636 257 22 2 3606 16254519 16258116 0.000000e+00 4844.0
10 TraesCS7A01G034600 chr7D 93.770 1910 103 10 784 2677 16361710 16363619 0.000000e+00 2854.0
11 TraesCS7A01G034600 chr7D 85.342 1917 260 15 789 2688 16265168 16267080 0.000000e+00 1964.0
12 TraesCS7A01G034600 chr7D 78.181 1737 336 29 811 2522 18403541 18401823 0.000000e+00 1068.0
13 TraesCS7A01G034600 chr7D 75.862 2175 476 35 818 2960 8192591 8190434 0.000000e+00 1062.0
14 TraesCS7A01G034600 chr7D 84.010 813 102 19 2801 3606 16363617 16364408 0.000000e+00 756.0
15 TraesCS7A01G034600 chr7D 81.378 827 136 11 2783 3606 16267094 16267905 0.000000e+00 658.0
16 TraesCS7A01G034600 chr7D 87.805 451 30 9 4838 5264 16337914 16338363 6.090000e-139 505.0
17 TraesCS7A01G034600 chr7D 93.913 230 13 1 452 681 16361405 16361633 3.900000e-91 346.0
18 TraesCS7A01G034600 chr7D 97.861 187 4 0 4722 4908 16337725 16337911 1.830000e-84 324.0
19 TraesCS7A01G034600 chr7D 85.127 316 25 10 3615 3908 16364504 16364819 2.380000e-78 303.0
20 TraesCS7A01G034600 chr7D 76.923 351 62 14 4116 4461 16365380 16365716 1.160000e-41 182.0
21 TraesCS7A01G034600 chr7D 85.714 147 19 2 3461 3606 26435743 26435888 2.540000e-33 154.0
22 TraesCS7A01G034600 chr7D 81.188 202 23 12 4486 4679 16365872 16366066 1.180000e-31 148.0
23 TraesCS7A01G034600 chr7D 77.460 315 23 24 3615 3908 16268019 16268306 1.530000e-30 145.0
24 TraesCS7A01G034600 chr7D 90.526 95 9 0 4543 4637 16337627 16337721 5.540000e-25 126.0
25 TraesCS7A01G034600 chr4A 85.881 2996 345 34 653 3606 718563350 718560391 0.000000e+00 3118.0
26 TraesCS7A01G034600 chr4A 83.657 3188 435 58 452 3606 718474360 718471226 0.000000e+00 2922.0
27 TraesCS7A01G034600 chr4A 84.068 2837 415 26 790 3606 718889101 718891920 0.000000e+00 2700.0
28 TraesCS7A01G034600 chr4A 85.744 1901 251 15 804 2688 718532715 718530819 0.000000e+00 1991.0
29 TraesCS7A01G034600 chr4A 75.114 2186 501 30 818 2971 715090417 715092591 0.000000e+00 983.0
30 TraesCS7A01G034600 chr4A 81.364 821 135 11 2789 3606 718530799 718529994 0.000000e+00 652.0
31 TraesCS7A01G034600 chr4A 87.811 402 22 9 218 618 718563723 718563348 3.740000e-121 446.0
32 TraesCS7A01G034600 chr4A 86.441 295 23 3 4678 4972 718558768 718558491 1.840000e-79 307.0
33 TraesCS7A01G034600 chr4A 88.496 226 16 6 4461 4677 718559025 718558801 1.120000e-66 265.0
34 TraesCS7A01G034600 chr4A 94.340 159 9 0 4306 4464 718559262 718559104 1.460000e-60 244.0
35 TraesCS7A01G034600 chr4A 90.374 187 10 3 4121 4307 718559481 718559303 6.820000e-59 239.0
36 TraesCS7A01G034600 chr4A 88.750 160 18 0 3913 4072 718559649 718559490 4.160000e-46 196.0
37 TraesCS7A01G034600 chr4A 93.478 92 6 0 5175 5266 718558368 718558277 2.560000e-28 137.0
38 TraesCS7A01G034600 chr4A 80.282 213 14 2 3703 3914 718529772 718529587 9.200000e-28 135.0
39 TraesCS7A01G034600 chr4A 85.833 120 15 2 455 573 714564594 714564712 5.540000e-25 126.0
40 TraesCS7A01G034600 chr4A 76.733 202 43 4 3379 3578 715359134 715359333 5.580000e-20 110.0
41 TraesCS7A01G034600 chr4A 94.595 37 2 0 159 195 718563763 718563727 2.050000e-04 58.4
42 TraesCS7A01G034600 chrUn 76.751 2185 450 38 818 2962 89851525 89853691 0.000000e+00 1168.0
43 TraesCS7A01G034600 chrUn 87.775 728 87 2 2204 2930 343297117 343297843 0.000000e+00 850.0
44 TraesCS7A01G034600 chrUn 86.323 446 61 0 3161 3606 307321141 307321586 2.200000e-133 486.0
45 TraesCS7A01G034600 chrUn 81.765 510 69 8 2941 3449 467757235 467757721 6.350000e-109 405.0
46 TraesCS7A01G034600 chrUn 78.873 284 44 11 4149 4429 307322174 307322444 1.510000e-40 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G034600 chr7A 15084842 15090107 5265 False 9725.000000 9725 100.000000 1 5266 1 chr7A.!!$F1 5265
1 TraesCS7A01G034600 chr7A 15099680 15102444 2764 False 1324.500000 2344 83.858000 789 3606 2 chr7A.!!$F2 2817
2 TraesCS7A01G034600 chr7A 18842314 18844037 1723 True 987.000000 987 77.382000 811 2519 1 chr7A.!!$R3 1708
3 TraesCS7A01G034600 chr7A 15214719 15220300 5581 False 539.333333 872 83.209667 2204 4429 3 chr7A.!!$F3 2225
4 TraesCS7A01G034600 chr7D 16254519 16258116 3597 False 4844.000000 4844 91.034000 2 3606 1 chr7D.!!$F1 3604
5 TraesCS7A01G034600 chr7D 18401823 18403541 1718 True 1068.000000 1068 78.181000 811 2522 1 chr7D.!!$R2 1711
6 TraesCS7A01G034600 chr7D 8190434 8192591 2157 True 1062.000000 1062 75.862000 818 2960 1 chr7D.!!$R1 2142
7 TraesCS7A01G034600 chr7D 16265168 16268306 3138 False 922.333333 1964 81.393333 789 3908 3 chr7D.!!$F3 3119
8 TraesCS7A01G034600 chr7D 16361405 16366066 4661 False 764.833333 2854 85.821833 452 4679 6 chr7D.!!$F5 4227
9 TraesCS7A01G034600 chr7D 16337627 16338363 736 False 318.333333 505 92.064000 4543 5264 3 chr7D.!!$F4 721
10 TraesCS7A01G034600 chr4A 718471226 718474360 3134 True 2922.000000 2922 83.657000 452 3606 1 chr4A.!!$R1 3154
11 TraesCS7A01G034600 chr4A 718889101 718891920 2819 False 2700.000000 2700 84.068000 790 3606 1 chr4A.!!$F4 2816
12 TraesCS7A01G034600 chr4A 715090417 715092591 2174 False 983.000000 983 75.114000 818 2971 1 chr4A.!!$F2 2153
13 TraesCS7A01G034600 chr4A 718529587 718532715 3128 True 926.000000 1991 82.463333 804 3914 3 chr4A.!!$R2 3110
14 TraesCS7A01G034600 chr4A 718558277 718563763 5486 True 556.711111 3118 90.018444 159 5266 9 chr4A.!!$R3 5107
15 TraesCS7A01G034600 chrUn 89851525 89853691 2166 False 1168.000000 1168 76.751000 818 2962 1 chrUn.!!$F1 2144
16 TraesCS7A01G034600 chrUn 343297117 343297843 726 False 850.000000 850 87.775000 2204 2930 1 chrUn.!!$F2 726
17 TraesCS7A01G034600 chrUn 307321141 307322444 1303 False 332.000000 486 82.598000 3161 4429 2 chrUn.!!$F4 1268

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
979 1005 0.892755 CATGGTGCATGTTGGAAGCT 59.107 50.000 0.00 0.00 37.12 3.74 F
2202 2241 1.278985 TGCCGGGTCCATGATATCATC 59.721 52.381 15.49 4.89 33.61 2.92 F
3220 6644 1.280421 AGATTCACTTGGAGTGGAGCC 59.720 52.381 8.11 0.00 40.92 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2371 2418 0.985490 GAGGGCTCCATGGGTCTCTT 60.985 60.0 13.02 0.00 0.00 2.85 R
3597 7022 0.179051 CCTCCTCTGCTTCATGCTCC 60.179 60.0 0.00 0.00 43.37 4.70 R
4282 8640 0.033366 ACCTGCCGCAAATTTTGGAC 59.967 50.0 10.96 3.13 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 0.982704 ACTCACTGCTGCCTCTGAAT 59.017 50.000 0.00 0.00 0.00 2.57
102 103 1.133407 CACTCCTCTCCGTAGAGTTGC 59.867 57.143 4.17 0.00 46.80 4.17
142 143 9.821662 GTAATCATCCACTAATTTAATTACCGC 57.178 33.333 0.00 0.00 0.00 5.68
189 190 2.591571 TGACTTGATGCATCTCCTCG 57.408 50.000 26.32 12.55 0.00 4.63
195 196 4.160439 ACTTGATGCATCTCCTCGACTAAA 59.840 41.667 26.32 8.22 0.00 1.85
208 209 1.373570 GACTAAAGCTGCGCTCCATT 58.626 50.000 9.73 1.07 38.25 3.16
267 268 2.890808 TCAGATCCGCTTTAATCGCT 57.109 45.000 0.00 0.00 0.00 4.93
314 315 3.114065 GGCTGTACGCTCTGTATACAAC 58.886 50.000 7.06 1.72 39.13 3.32
327 328 4.633175 TGTATACAACGGAAAAGAGTGCA 58.367 39.130 2.20 0.00 0.00 4.57
383 384 2.509166 TCACCTACCGAGTCATCAGT 57.491 50.000 0.00 0.00 0.00 3.41
435 437 1.428620 GAGAGACTCGTACGGTGCC 59.571 63.158 16.52 1.34 0.00 5.01
436 438 1.002379 AGAGACTCGTACGGTGCCT 60.002 57.895 16.52 6.57 0.00 4.75
437 439 1.136984 GAGACTCGTACGGTGCCTG 59.863 63.158 16.52 2.02 0.00 4.85
438 440 2.506438 GACTCGTACGGTGCCTGC 60.506 66.667 16.52 0.00 0.00 4.85
439 441 2.989824 ACTCGTACGGTGCCTGCT 60.990 61.111 16.52 0.00 0.00 4.24
440 442 2.507102 CTCGTACGGTGCCTGCTG 60.507 66.667 16.52 0.00 0.00 4.41
441 443 3.989698 CTCGTACGGTGCCTGCTGG 62.990 68.421 16.52 5.03 0.00 4.85
699 707 3.702792 AGCTAGCTAGTCTCTTTGGTCA 58.297 45.455 17.69 0.00 0.00 4.02
759 770 7.658982 TGATATCTGTTAATTCAGAGATGCACC 59.341 37.037 8.53 0.00 43.47 5.01
764 775 2.479566 ATTCAGAGATGCACCGTTGT 57.520 45.000 0.00 0.00 0.00 3.32
767 778 3.165058 TCAGAGATGCACCGTTGTATC 57.835 47.619 2.79 2.79 43.31 2.24
774 785 1.003696 TGCACCGTTGTATCCCATCAA 59.996 47.619 0.00 0.00 0.00 2.57
814 840 8.966868 TCTAATTCTCTTTTGAACACTGGTTTT 58.033 29.630 0.00 0.00 37.36 2.43
879 905 3.938963 TGGAGGTCGCTGAATCAATAAAC 59.061 43.478 0.00 0.00 0.00 2.01
979 1005 0.892755 CATGGTGCATGTTGGAAGCT 59.107 50.000 0.00 0.00 37.12 3.74
1146 1172 3.875727 GTGACATGGATTCTCACATGGAG 59.124 47.826 8.17 1.04 46.60 3.86
1366 1392 3.801114 ATAATTTTTCTTGCCGGGCTC 57.199 42.857 21.46 0.00 0.00 4.70
1407 1433 8.896744 CAAACATTTTCCAAGATAGAGATGCTA 58.103 33.333 0.00 0.00 0.00 3.49
1426 1452 7.834681 AGATGCTAAAGGATATGATCATGCAAT 59.165 33.333 18.72 3.69 0.00 3.56
1710 1745 3.378512 ACACCTCCAGATAGATCAAGCA 58.621 45.455 0.00 0.00 0.00 3.91
1748 1783 6.105333 TGAAAAAGATTGGGAAAACACACAG 58.895 36.000 0.00 0.00 0.00 3.66
1755 1790 3.963129 TGGGAAAACACACAGAGAAACT 58.037 40.909 0.00 0.00 0.00 2.66
2202 2241 1.278985 TGCCGGGTCCATGATATCATC 59.721 52.381 15.49 4.89 33.61 2.92
2371 2418 6.262496 TGTTCGGTCATTAACAATGTTTGGTA 59.738 34.615 3.17 0.00 39.87 3.25
2621 2696 6.323996 AGTTATATAGCAGCACTACCAACTGA 59.676 38.462 0.00 0.00 32.40 3.41
2628 2703 2.899900 AGCACTACCAACTGAGATCACA 59.100 45.455 0.00 0.00 0.00 3.58
2778 2856 2.005451 GCTGATCATCGTGCTGAGTTT 58.995 47.619 0.00 0.00 0.00 2.66
2835 2913 2.103263 GTCCAAGACAGAAGGTGTGAGT 59.897 50.000 0.00 0.00 40.56 3.41
3006 6427 9.160496 GAGCAAAATCCCAAGATACTATATCTG 57.840 37.037 0.00 0.00 30.42 2.90
3015 6436 4.082845 AGATACTATATCTGTGTGCCGCT 58.917 43.478 0.00 0.00 0.00 5.52
3055 6476 1.550524 TGCGCTCTCTTAGTGTGGATT 59.449 47.619 9.73 0.00 38.05 3.01
3060 6481 4.872691 CGCTCTCTTAGTGTGGATTTTGAT 59.127 41.667 0.00 0.00 0.00 2.57
3063 6484 7.225538 CGCTCTCTTAGTGTGGATTTTGATTAT 59.774 37.037 0.00 0.00 0.00 1.28
3071 6492 5.461078 GTGTGGATTTTGATTATGATGCTGC 59.539 40.000 0.00 0.00 0.00 5.25
3073 6494 4.650131 TGGATTTTGATTATGATGCTGCCA 59.350 37.500 0.00 0.00 0.00 4.92
3220 6644 1.280421 AGATTCACTTGGAGTGGAGCC 59.720 52.381 8.11 0.00 40.92 4.70
3237 6661 1.558756 AGCCACCTGAAGGAAGATCAG 59.441 52.381 2.62 0.00 43.15 2.90
3243 6667 5.130145 CCACCTGAAGGAAGATCAGATAACT 59.870 44.000 2.62 0.00 45.74 2.24
3290 6714 3.418068 GCACCTCAGTCTGCGCAC 61.418 66.667 5.66 0.00 0.00 5.34
3470 6894 5.851693 TGGAGTCAGGGATTATTGGTATCAT 59.148 40.000 0.00 0.00 0.00 2.45
3483 6907 6.575244 ATTGGTATCATTCACCTTCCAGTA 57.425 37.500 0.00 0.00 36.96 2.74
3484 6908 6.575244 TTGGTATCATTCACCTTCCAGTAT 57.425 37.500 0.00 0.00 36.96 2.12
3580 7004 1.304381 AACCATCCCGTGCTGCAAT 60.304 52.632 2.77 0.00 0.00 3.56
3597 7022 6.145029 CTGCAATTCAACAGAGACCGAAGG 62.145 50.000 0.00 0.00 45.77 3.46
3642 7172 4.771054 ACGAACCTCAGGTCTACTAATTGT 59.229 41.667 0.00 0.00 33.12 2.71
3646 7176 6.681729 ACCTCAGGTCTACTAATTGTTTCA 57.318 37.500 0.00 0.00 0.00 2.69
3695 7245 7.490725 AGTTATGAACTGAGATGTTTCATCTCG 59.509 37.037 24.83 21.80 45.58 4.04
3699 7249 2.788233 CTGAGATGTTTCATCTCGCTCG 59.212 50.000 24.83 14.56 45.58 5.03
3700 7250 2.164422 TGAGATGTTTCATCTCGCTCGT 59.836 45.455 24.83 1.60 45.58 4.18
3701 7251 3.182967 GAGATGTTTCATCTCGCTCGTT 58.817 45.455 19.32 0.00 35.72 3.85
3787 7341 2.556189 ACGAAGATGCTAGCTGATCGAT 59.444 45.455 27.05 14.31 33.42 3.59
3793 7347 0.249615 GCTAGCTGATCGATGGTGCA 60.250 55.000 7.70 0.00 0.00 4.57
3830 7384 1.277273 TCATCTGTCCTTGCTGTCTGG 59.723 52.381 0.00 0.00 0.00 3.86
3852 7406 2.047655 CGCTTTCGCTGGTACCCA 60.048 61.111 10.07 0.00 0.00 4.51
3860 7414 0.462047 CGCTGGTACCCATCTGTTCC 60.462 60.000 10.07 0.00 30.82 3.62
3884 7438 6.237595 CCTTTCTTTACATCTAACTTCTCGCG 60.238 42.308 0.00 0.00 0.00 5.87
3892 7446 0.318869 TAACTTCTCGCGCCGTTTGA 60.319 50.000 0.00 0.00 0.00 2.69
3929 7810 9.793245 GAAATGTATGTACATGTATTTCGTAGC 57.207 33.333 26.39 14.97 45.55 3.58
3947 7828 3.423539 AGCTTGGCAAAGACATACTCA 57.576 42.857 4.56 0.00 35.19 3.41
3987 7868 2.362397 TCTATGTCTTCGGTGCAGATCC 59.638 50.000 0.00 0.00 0.00 3.36
4057 7939 8.213518 TGAAAGAAATCCTTGTATATGCACTC 57.786 34.615 0.00 0.00 34.79 3.51
4061 7943 9.499479 AAGAAATCCTTGTATATGCACTCATAG 57.501 33.333 0.00 0.00 34.81 2.23
4077 7959 6.156519 CACTCATAGTGTTAACTGCAGTACA 58.843 40.000 22.01 18.96 41.19 2.90
4078 7960 6.645003 CACTCATAGTGTTAACTGCAGTACAA 59.355 38.462 22.01 14.53 41.19 2.41
4079 7961 7.170828 CACTCATAGTGTTAACTGCAGTACAAA 59.829 37.037 22.01 13.24 41.19 2.83
4080 7962 7.713507 ACTCATAGTGTTAACTGCAGTACAAAA 59.286 33.333 22.01 12.90 37.19 2.44
4081 7963 8.615878 TCATAGTGTTAACTGCAGTACAAAAT 57.384 30.769 22.01 14.49 37.19 1.82
4082 7964 8.503196 TCATAGTGTTAACTGCAGTACAAAATG 58.497 33.333 22.01 23.33 37.19 2.32
4083 7965 6.693315 AGTGTTAACTGCAGTACAAAATGT 57.307 33.333 22.01 3.99 34.48 2.71
4086 7968 8.679100 AGTGTTAACTGCAGTACAAAATGTAAA 58.321 29.630 22.01 1.48 32.75 2.01
4107 8465 8.316214 TGTAAAATTAGTACCATTCCGACTCTT 58.684 33.333 0.00 0.00 0.00 2.85
4115 8473 5.687166 ACCATTCCGACTCTTACCATTAA 57.313 39.130 0.00 0.00 0.00 1.40
4116 8474 6.248569 ACCATTCCGACTCTTACCATTAAT 57.751 37.500 0.00 0.00 0.00 1.40
4117 8475 6.659824 ACCATTCCGACTCTTACCATTAATT 58.340 36.000 0.00 0.00 0.00 1.40
4119 8477 7.931948 ACCATTCCGACTCTTACCATTAATTAG 59.068 37.037 0.00 0.00 0.00 1.73
4136 8494 9.401058 CATTAATTAGAAAACTGGGATCTGTCT 57.599 33.333 0.00 0.00 0.00 3.41
4137 8495 9.620259 ATTAATTAGAAAACTGGGATCTGTCTC 57.380 33.333 0.00 0.00 0.00 3.36
4144 8502 2.711009 ACTGGGATCTGTCTCAAAACCA 59.289 45.455 0.00 0.00 33.54 3.67
4240 8598 1.074090 TGGGACAACCTGGTCTGGA 60.074 57.895 0.00 0.00 41.11 3.86
4244 8602 0.108585 GACAACCTGGTCTGGAGCAA 59.891 55.000 0.00 0.00 38.46 3.91
4245 8603 0.179018 ACAACCTGGTCTGGAGCAAC 60.179 55.000 0.00 0.00 38.46 4.17
4247 8605 0.179018 AACCTGGTCTGGAGCAACAC 60.179 55.000 0.00 0.00 38.46 3.32
4248 8606 1.344953 ACCTGGTCTGGAGCAACACA 61.345 55.000 0.00 0.00 38.46 3.72
4249 8607 0.037303 CCTGGTCTGGAGCAACACAT 59.963 55.000 4.09 0.00 38.46 3.21
4251 8609 2.290260 CCTGGTCTGGAGCAACACATAA 60.290 50.000 4.09 0.00 38.46 1.90
4252 8610 3.614092 CTGGTCTGGAGCAACACATAAT 58.386 45.455 4.09 0.00 38.46 1.28
4253 8611 3.346315 TGGTCTGGAGCAACACATAATG 58.654 45.455 0.00 0.00 35.69 1.90
4255 8613 3.609853 GTCTGGAGCAACACATAATGGA 58.390 45.455 0.00 0.00 0.00 3.41
4256 8614 3.375299 GTCTGGAGCAACACATAATGGAC 59.625 47.826 0.00 0.00 0.00 4.02
4260 8618 3.129287 GGAGCAACACATAATGGACCTTG 59.871 47.826 0.00 0.00 0.00 3.61
4261 8619 4.009675 GAGCAACACATAATGGACCTTGA 58.990 43.478 0.00 0.00 0.00 3.02
4262 8620 3.758554 AGCAACACATAATGGACCTTGAC 59.241 43.478 0.00 0.00 0.00 3.18
4263 8621 3.758554 GCAACACATAATGGACCTTGACT 59.241 43.478 0.00 0.00 0.00 3.41
4264 8622 4.941263 GCAACACATAATGGACCTTGACTA 59.059 41.667 0.00 0.00 0.00 2.59
4267 8625 7.475015 CAACACATAATGGACCTTGACTAATG 58.525 38.462 0.00 0.00 0.00 1.90
4268 8626 6.122277 ACACATAATGGACCTTGACTAATGG 58.878 40.000 0.00 0.00 0.00 3.16
4272 8630 2.489938 GGACCTTGACTAATGGTGCA 57.510 50.000 0.00 0.00 41.04 4.57
4273 8631 2.084546 GGACCTTGACTAATGGTGCAC 58.915 52.381 8.80 8.80 41.04 4.57
4274 8632 2.290323 GGACCTTGACTAATGGTGCACT 60.290 50.000 17.98 0.00 41.04 4.40
4275 8633 2.744202 GACCTTGACTAATGGTGCACTG 59.256 50.000 17.98 4.95 33.74 3.66
4277 8635 2.744202 CCTTGACTAATGGTGCACTGTC 59.256 50.000 17.98 16.10 0.00 3.51
4278 8636 3.402110 CTTGACTAATGGTGCACTGTCA 58.598 45.455 17.98 18.18 33.41 3.58
4281 8639 3.752747 TGACTAATGGTGCACTGTCATTG 59.247 43.478 22.47 16.41 33.72 2.82
4282 8640 3.084039 ACTAATGGTGCACTGTCATTGG 58.916 45.455 22.47 21.69 36.09 3.16
4283 8641 1.999648 AATGGTGCACTGTCATTGGT 58.000 45.000 17.98 0.00 30.89 3.67
4284 8642 1.538047 ATGGTGCACTGTCATTGGTC 58.462 50.000 17.98 0.00 0.00 4.02
4285 8643 0.537143 TGGTGCACTGTCATTGGTCC 60.537 55.000 17.98 0.00 0.00 4.46
4287 8645 1.317613 GTGCACTGTCATTGGTCCAA 58.682 50.000 10.32 6.80 0.00 3.53
4288 8646 1.680735 GTGCACTGTCATTGGTCCAAA 59.319 47.619 10.32 0.00 0.00 3.28
4290 8648 2.964464 TGCACTGTCATTGGTCCAAAAT 59.036 40.909 8.75 0.00 0.00 1.82
4291 8649 3.387374 TGCACTGTCATTGGTCCAAAATT 59.613 39.130 8.75 0.00 0.00 1.82
4295 8653 3.388308 TGTCATTGGTCCAAAATTTGCG 58.612 40.909 8.75 0.00 0.00 4.85
4297 8655 1.464219 CATTGGTCCAAAATTTGCGGC 59.536 47.619 8.75 0.00 0.00 6.53
4298 8656 0.465705 TTGGTCCAAAATTTGCGGCA 59.534 45.000 0.40 0.00 0.00 5.69
4299 8657 0.033228 TGGTCCAAAATTTGCGGCAG 59.967 50.000 1.67 0.00 0.00 4.85
4300 8658 0.670239 GGTCCAAAATTTGCGGCAGG 60.670 55.000 1.67 0.00 0.00 4.85
4301 8659 0.033366 GTCCAAAATTTGCGGCAGGT 59.967 50.000 1.67 0.00 0.00 4.00
4306 8664 3.057174 CCAAAATTTGCGGCAGGTTACTA 60.057 43.478 1.67 0.00 0.00 1.82
4307 8665 4.165779 CAAAATTTGCGGCAGGTTACTAG 58.834 43.478 1.67 0.00 0.00 2.57
4310 8668 0.323629 TTGCGGCAGGTTACTAGCTT 59.676 50.000 1.67 0.00 0.00 3.74
4311 8669 0.391130 TGCGGCAGGTTACTAGCTTG 60.391 55.000 0.00 0.00 0.00 4.01
4312 8670 1.706287 GCGGCAGGTTACTAGCTTGC 61.706 60.000 0.00 0.00 0.00 4.01
4313 8671 0.391130 CGGCAGGTTACTAGCTTGCA 60.391 55.000 8.86 0.00 31.75 4.08
4315 8673 1.740025 GGCAGGTTACTAGCTTGCAAG 59.260 52.381 22.44 22.44 31.75 4.01
4317 8675 3.074412 GCAGGTTACTAGCTTGCAAGAA 58.926 45.455 30.39 15.45 0.00 2.52
4318 8676 3.126000 GCAGGTTACTAGCTTGCAAGAAG 59.874 47.826 30.39 25.05 0.00 2.85
4319 8677 3.686726 CAGGTTACTAGCTTGCAAGAAGG 59.313 47.826 30.39 18.67 0.00 3.46
4320 8678 2.420372 GGTTACTAGCTTGCAAGAAGGC 59.580 50.000 30.39 15.39 0.00 4.35
4321 8679 3.074412 GTTACTAGCTTGCAAGAAGGCA 58.926 45.455 30.39 14.29 43.19 4.75
4329 8687 0.892358 TGCAAGAAGGCAAGCAGAGG 60.892 55.000 0.00 0.00 41.65 3.69
4330 8688 0.607489 GCAAGAAGGCAAGCAGAGGA 60.607 55.000 0.00 0.00 0.00 3.71
4331 8689 1.901591 CAAGAAGGCAAGCAGAGGAA 58.098 50.000 0.00 0.00 0.00 3.36
4332 8690 1.811359 CAAGAAGGCAAGCAGAGGAAG 59.189 52.381 0.00 0.00 0.00 3.46
4333 8691 0.327591 AGAAGGCAAGCAGAGGAAGG 59.672 55.000 0.00 0.00 0.00 3.46
4334 8692 0.037447 GAAGGCAAGCAGAGGAAGGT 59.963 55.000 0.00 0.00 0.00 3.50
4335 8693 1.279271 GAAGGCAAGCAGAGGAAGGTA 59.721 52.381 0.00 0.00 0.00 3.08
4337 8695 1.003696 AGGCAAGCAGAGGAAGGTAAC 59.996 52.381 0.00 0.00 0.00 2.50
4352 8710 2.911484 GGTAACTCCTGATGCTTCCTG 58.089 52.381 0.00 0.00 0.00 3.86
4353 8711 2.420687 GGTAACTCCTGATGCTTCCTGG 60.421 54.545 0.00 0.32 0.00 4.45
4354 8712 0.034670 AACTCCTGATGCTTCCTGGC 60.035 55.000 0.00 0.00 0.00 4.85
4367 8725 6.788598 TGCTTCCTGGCATTAATTAATTCA 57.211 33.333 8.01 8.85 37.29 2.57
4368 8726 7.180322 TGCTTCCTGGCATTAATTAATTCAA 57.820 32.000 8.01 0.00 37.29 2.69
4369 8727 7.267128 TGCTTCCTGGCATTAATTAATTCAAG 58.733 34.615 8.01 6.61 37.29 3.02
4370 8728 7.093377 TGCTTCCTGGCATTAATTAATTCAAGT 60.093 33.333 8.01 0.00 37.29 3.16
4371 8729 7.436376 GCTTCCTGGCATTAATTAATTCAAGTC 59.564 37.037 8.01 0.00 0.00 3.01
4372 8730 7.953005 TCCTGGCATTAATTAATTCAAGTCA 57.047 32.000 8.01 4.48 0.00 3.41
4374 8732 8.980596 TCCTGGCATTAATTAATTCAAGTCATT 58.019 29.630 8.01 0.00 0.00 2.57
4388 8746 9.753674 AATTCAAGTCATTATGGTAGAAAGGAA 57.246 29.630 0.00 0.00 0.00 3.36
4389 8747 9.927081 ATTCAAGTCATTATGGTAGAAAGGAAT 57.073 29.630 0.00 0.00 0.00 3.01
4390 8748 8.964476 TCAAGTCATTATGGTAGAAAGGAATC 57.036 34.615 0.00 0.00 0.00 2.52
4391 8749 8.548025 TCAAGTCATTATGGTAGAAAGGAATCA 58.452 33.333 0.00 0.00 0.00 2.57
4394 8752 5.991606 TCATTATGGTAGAAAGGAATCAGCG 59.008 40.000 0.00 0.00 0.00 5.18
4401 8759 4.954092 AGAAAGGAATCAGCGTTCATTC 57.046 40.909 0.00 0.00 31.61 2.67
4403 8761 4.394300 AGAAAGGAATCAGCGTTCATTCAG 59.606 41.667 0.00 0.00 31.61 3.02
4404 8762 3.616956 AGGAATCAGCGTTCATTCAGA 57.383 42.857 0.00 0.00 31.58 3.27
4405 8763 3.942829 AGGAATCAGCGTTCATTCAGAA 58.057 40.909 0.00 0.00 31.58 3.02
4406 8764 4.521146 AGGAATCAGCGTTCATTCAGAAT 58.479 39.130 0.00 0.00 38.76 2.40
4407 8765 4.334759 AGGAATCAGCGTTCATTCAGAATG 59.665 41.667 16.12 16.12 44.45 2.67
4409 8767 1.739466 TCAGCGTTCATTCAGAATGGC 59.261 47.619 20.91 16.41 42.37 4.40
4410 8768 0.729116 AGCGTTCATTCAGAATGGCG 59.271 50.000 24.22 24.22 42.37 5.69
4411 8769 0.248215 GCGTTCATTCAGAATGGCGG 60.248 55.000 26.89 17.04 42.37 6.13
4412 8770 0.378257 CGTTCATTCAGAATGGCGGG 59.622 55.000 20.91 6.65 39.17 6.13
4413 8771 0.101219 GTTCATTCAGAATGGCGGGC 59.899 55.000 20.91 0.00 38.76 6.13
4419 8777 0.611618 TCAGAATGGCGGGCATGTTT 60.612 50.000 18.40 2.93 36.16 2.83
4424 8782 0.903942 ATGGCGGGCATGTTTGAAAT 59.096 45.000 16.95 0.00 0.00 2.17
4425 8783 0.683973 TGGCGGGCATGTTTGAAATT 59.316 45.000 0.00 0.00 0.00 1.82
4426 8784 1.071385 TGGCGGGCATGTTTGAAATTT 59.929 42.857 0.00 0.00 0.00 1.82
4427 8785 1.731709 GGCGGGCATGTTTGAAATTTC 59.268 47.619 11.41 11.41 0.00 2.17
4428 8786 2.411904 GCGGGCATGTTTGAAATTTCA 58.588 42.857 16.91 16.91 34.92 2.69
4429 8787 2.412770 GCGGGCATGTTTGAAATTTCAG 59.587 45.455 19.64 9.98 38.61 3.02
4430 8788 2.995258 CGGGCATGTTTGAAATTTCAGG 59.005 45.455 19.64 10.20 38.61 3.86
4431 8789 2.743664 GGGCATGTTTGAAATTTCAGGC 59.256 45.455 19.64 18.42 38.61 4.85
4432 8790 3.401182 GGCATGTTTGAAATTTCAGGCA 58.599 40.909 19.64 20.48 38.95 4.75
4433 8791 4.004982 GGCATGTTTGAAATTTCAGGCAT 58.995 39.130 22.77 22.77 38.95 4.40
4434 8792 4.093850 GGCATGTTTGAAATTTCAGGCATC 59.906 41.667 24.36 20.04 38.95 3.91
4436 8794 5.410439 GCATGTTTGAAATTTCAGGCATCTT 59.590 36.000 24.36 11.73 38.61 2.40
4437 8795 6.401796 GCATGTTTGAAATTTCAGGCATCTTC 60.402 38.462 24.36 16.98 38.61 2.87
4438 8796 6.159299 TGTTTGAAATTTCAGGCATCTTCA 57.841 33.333 19.64 9.30 38.61 3.02
4440 8798 7.894708 TGTTTGAAATTTCAGGCATCTTCATA 58.105 30.769 19.64 0.00 38.61 2.15
4441 8799 8.533657 TGTTTGAAATTTCAGGCATCTTCATAT 58.466 29.630 19.64 0.00 38.61 1.78
4442 8800 9.028185 GTTTGAAATTTCAGGCATCTTCATATC 57.972 33.333 19.64 0.00 38.61 1.63
4443 8801 8.529424 TTGAAATTTCAGGCATCTTCATATCT 57.471 30.769 19.64 0.00 38.61 1.98
4447 8805 9.803507 AAATTTCAGGCATCTTCATATCTATGA 57.196 29.630 0.00 0.00 40.69 2.15
4449 8807 5.975282 TCAGGCATCTTCATATCTATGAGC 58.025 41.667 0.58 1.51 42.99 4.26
4450 8808 5.105023 TCAGGCATCTTCATATCTATGAGCC 60.105 44.000 15.33 15.33 44.33 4.70
4451 8809 4.163839 AGGCATCTTCATATCTATGAGCCC 59.836 45.833 17.78 8.76 44.73 5.19
4452 8810 4.080695 GGCATCTTCATATCTATGAGCCCA 60.081 45.833 13.39 0.00 42.99 5.36
4454 8812 5.585445 GCATCTTCATATCTATGAGCCCAAG 59.415 44.000 0.58 0.00 42.99 3.61
4455 8813 6.575847 GCATCTTCATATCTATGAGCCCAAGA 60.576 42.308 0.58 1.72 42.99 3.02
4456 8814 6.602410 TCTTCATATCTATGAGCCCAAGAG 57.398 41.667 0.58 0.00 42.99 2.85
4457 8815 6.318112 TCTTCATATCTATGAGCCCAAGAGA 58.682 40.000 0.58 0.00 42.99 3.10
4461 8819 6.727697 TCATATCTATGAGCCCAAGAGATGAA 59.272 38.462 12.04 2.08 42.12 2.57
4463 8821 5.901413 TCTATGAGCCCAAGAGATGAAAT 57.099 39.130 0.00 0.00 0.00 2.17
4464 8822 5.618236 TCTATGAGCCCAAGAGATGAAATG 58.382 41.667 0.00 0.00 0.00 2.32
4465 8823 4.515028 ATGAGCCCAAGAGATGAAATGA 57.485 40.909 0.00 0.00 0.00 2.57
4466 8824 4.305539 TGAGCCCAAGAGATGAAATGAA 57.694 40.909 0.00 0.00 0.00 2.57
4467 8825 4.267536 TGAGCCCAAGAGATGAAATGAAG 58.732 43.478 0.00 0.00 0.00 3.02
4468 8826 3.022406 AGCCCAAGAGATGAAATGAAGC 58.978 45.455 0.00 0.00 0.00 3.86
4469 8827 2.756760 GCCCAAGAGATGAAATGAAGCA 59.243 45.455 0.00 0.00 0.00 3.91
4471 8829 3.380637 CCCAAGAGATGAAATGAAGCAGG 59.619 47.826 0.00 0.00 0.00 4.85
4473 8831 4.703575 CCAAGAGATGAAATGAAGCAGGAA 59.296 41.667 0.00 0.00 0.00 3.36
4474 8832 5.163642 CCAAGAGATGAAATGAAGCAGGAAG 60.164 44.000 0.00 0.00 0.00 3.46
4475 8833 3.946558 AGAGATGAAATGAAGCAGGAAGC 59.053 43.478 0.00 0.00 46.19 3.86
4498 8856 4.357947 GCTGGTGCCTCGACGACA 62.358 66.667 0.00 0.00 0.00 4.35
4499 8857 2.430921 CTGGTGCCTCGACGACAC 60.431 66.667 9.47 9.47 0.00 3.67
4500 8858 2.910479 TGGTGCCTCGACGACACT 60.910 61.111 15.58 0.00 34.70 3.55
4501 8859 2.126424 GGTGCCTCGACGACACTC 60.126 66.667 15.58 5.39 34.70 3.51
4503 8861 2.596338 TGCCTCGACGACACTCCA 60.596 61.111 0.00 0.00 0.00 3.86
4505 8863 1.517257 GCCTCGACGACACTCCATG 60.517 63.158 0.00 0.00 0.00 3.66
4517 8875 2.708051 CACTCCATGTGCATCTGAAGT 58.292 47.619 0.00 0.00 40.06 3.01
4518 8876 2.418976 CACTCCATGTGCATCTGAAGTG 59.581 50.000 4.00 4.00 40.06 3.16
4519 8877 2.039480 ACTCCATGTGCATCTGAAGTGT 59.961 45.455 0.00 0.00 0.00 3.55
4520 8878 2.418976 CTCCATGTGCATCTGAAGTGTG 59.581 50.000 0.00 0.00 0.00 3.82
4521 8879 2.038820 TCCATGTGCATCTGAAGTGTGA 59.961 45.455 0.00 0.00 0.00 3.58
4522 8880 2.815503 CCATGTGCATCTGAAGTGTGAA 59.184 45.455 0.00 0.00 0.00 3.18
4525 8883 1.195448 GTGCATCTGAAGTGTGAACCG 59.805 52.381 0.00 0.00 0.00 4.44
4526 8884 1.069978 TGCATCTGAAGTGTGAACCGA 59.930 47.619 0.00 0.00 0.00 4.69
4528 8886 3.056179 TGCATCTGAAGTGTGAACCGATA 60.056 43.478 0.00 0.00 0.00 2.92
4529 8887 4.122776 GCATCTGAAGTGTGAACCGATAT 58.877 43.478 0.00 0.00 0.00 1.63
4530 8888 4.210120 GCATCTGAAGTGTGAACCGATATC 59.790 45.833 0.00 0.00 0.00 1.63
4531 8889 5.351458 CATCTGAAGTGTGAACCGATATCA 58.649 41.667 3.12 0.00 0.00 2.15
4533 8891 5.592054 TCTGAAGTGTGAACCGATATCATC 58.408 41.667 3.12 0.00 0.00 2.92
4535 8893 4.405680 TGAAGTGTGAACCGATATCATCCT 59.594 41.667 3.12 0.00 0.00 3.24
4536 8894 4.592485 AGTGTGAACCGATATCATCCTC 57.408 45.455 3.12 0.00 0.00 3.71
4537 8895 3.960755 AGTGTGAACCGATATCATCCTCA 59.039 43.478 3.12 0.00 0.00 3.86
4539 8897 5.775195 AGTGTGAACCGATATCATCCTCATA 59.225 40.000 3.12 0.00 0.00 2.15
4541 8899 6.366332 GTGTGAACCGATATCATCCTCATAAC 59.634 42.308 3.12 0.54 0.00 1.89
4543 8901 6.587990 GTGAACCGATATCATCCTCATAACTG 59.412 42.308 3.12 0.00 0.00 3.16
4544 8902 5.667539 ACCGATATCATCCTCATAACTGG 57.332 43.478 3.12 0.00 0.00 4.00
4545 8903 5.087323 ACCGATATCATCCTCATAACTGGT 58.913 41.667 3.12 0.00 0.00 4.00
4564 9091 2.879026 GGTCAGTTCAGAAACCAACTCC 59.121 50.000 0.00 0.00 35.92 3.85
4620 9150 9.770503 CATATACTTGCAATTTCTGATAGATGC 57.229 33.333 0.00 0.00 30.58 3.91
4637 9167 2.629656 GCTGTCGGCCTGCAAACAT 61.630 57.895 0.00 0.00 37.89 2.71
4697 9264 1.004044 CTGTTGGTGGCCTCTCAAGAT 59.996 52.381 3.32 0.00 0.00 2.40
4699 9266 2.846206 TGTTGGTGGCCTCTCAAGATAT 59.154 45.455 3.32 0.00 0.00 1.63
4707 9274 2.865670 GCCTCTCAAGATATGCTCCGTG 60.866 54.545 0.00 0.00 0.00 4.94
4710 9277 4.262377 CCTCTCAAGATATGCTCCGTGATT 60.262 45.833 0.00 0.00 0.00 2.57
4717 9284 8.246871 TCAAGATATGCTCCGTGATTAGATTAG 58.753 37.037 0.00 0.00 0.00 1.73
4727 9294 3.812053 GTGATTAGATTAGGTGGCAGCTG 59.188 47.826 28.23 10.11 0.00 4.24
4730 9297 0.107312 AGATTAGGTGGCAGCTGCTG 60.107 55.000 35.82 24.80 41.70 4.41
4739 9306 2.044252 CAGCTGCTGGCCCTGATT 60.044 61.111 21.71 0.00 43.05 2.57
4740 9307 2.119655 CAGCTGCTGGCCCTGATTC 61.120 63.158 21.71 0.00 43.05 2.52
4761 9328 2.180769 CACCAAGACGGCGATCGA 59.819 61.111 21.57 0.00 42.43 3.59
4819 9386 2.094494 TGATGCTCTCGTCTCTGTTTCC 60.094 50.000 0.00 0.00 0.00 3.13
4820 9387 1.621992 TGCTCTCGTCTCTGTTTCCT 58.378 50.000 0.00 0.00 0.00 3.36
4832 9399 6.567891 CGTCTCTGTTTCCTTGGATTTTAACC 60.568 42.308 0.00 0.00 0.00 2.85
4833 9400 6.490381 GTCTCTGTTTCCTTGGATTTTAACCT 59.510 38.462 0.00 0.00 0.00 3.50
4834 9401 6.715264 TCTCTGTTTCCTTGGATTTTAACCTC 59.285 38.462 0.00 0.00 0.00 3.85
4835 9402 6.610830 TCTGTTTCCTTGGATTTTAACCTCT 58.389 36.000 0.00 0.00 0.00 3.69
4836 9403 6.490040 TCTGTTTCCTTGGATTTTAACCTCTG 59.510 38.462 0.00 0.00 0.00 3.35
4837 9404 5.538433 TGTTTCCTTGGATTTTAACCTCTGG 59.462 40.000 0.00 0.00 0.00 3.86
4838 9405 5.333566 TTCCTTGGATTTTAACCTCTGGT 57.666 39.130 0.00 0.00 37.65 4.00
4839 9406 6.457159 TTCCTTGGATTTTAACCTCTGGTA 57.543 37.500 0.00 0.00 33.12 3.25
4840 9407 6.457159 TCCTTGGATTTTAACCTCTGGTAA 57.543 37.500 0.00 0.00 33.12 2.85
4841 9408 7.039722 TCCTTGGATTTTAACCTCTGGTAAT 57.960 36.000 0.00 0.00 33.12 1.89
4842 9409 6.889722 TCCTTGGATTTTAACCTCTGGTAATG 59.110 38.462 0.00 0.00 33.12 1.90
4843 9410 6.663523 CCTTGGATTTTAACCTCTGGTAATGT 59.336 38.462 0.00 0.00 33.12 2.71
4844 9411 7.178451 CCTTGGATTTTAACCTCTGGTAATGTT 59.822 37.037 0.00 0.00 33.12 2.71
4845 9412 7.461182 TGGATTTTAACCTCTGGTAATGTTG 57.539 36.000 0.00 0.00 33.12 3.33
4846 9413 7.007723 TGGATTTTAACCTCTGGTAATGTTGT 58.992 34.615 0.00 0.00 33.12 3.32
4847 9414 8.164733 TGGATTTTAACCTCTGGTAATGTTGTA 58.835 33.333 0.00 0.00 33.12 2.41
4848 9415 8.456471 GGATTTTAACCTCTGGTAATGTTGTAC 58.544 37.037 0.00 0.00 33.12 2.90
4849 9416 7.748691 TTTTAACCTCTGGTAATGTTGTACC 57.251 36.000 0.00 0.00 43.45 3.34
4850 9417 6.691255 TTAACCTCTGGTAATGTTGTACCT 57.309 37.500 3.24 0.00 43.52 3.08
4884 9451 5.888982 TTAGAAACTTGACTCCCTCTGTT 57.111 39.130 0.00 0.00 0.00 3.16
4891 9458 5.751586 ACTTGACTCCCTCTGTTTTGTTAA 58.248 37.500 0.00 0.00 0.00 2.01
4900 9467 5.741982 CCCTCTGTTTTGTTAACGAACTTTG 59.258 40.000 19.24 12.43 36.45 2.77
4906 9473 2.645802 TGTTAACGAACTTTGCAGGGT 58.354 42.857 0.26 0.00 36.45 4.34
4908 9475 4.197750 TGTTAACGAACTTTGCAGGGTAA 58.802 39.130 0.26 0.00 36.45 2.85
4912 9479 2.224670 ACGAACTTTGCAGGGTAATGGA 60.225 45.455 0.00 0.00 0.00 3.41
4913 9480 2.420022 CGAACTTTGCAGGGTAATGGAG 59.580 50.000 0.00 0.00 0.00 3.86
4916 9483 3.844640 ACTTTGCAGGGTAATGGAGTTT 58.155 40.909 0.00 0.00 0.00 2.66
4920 9487 2.642311 TGCAGGGTAATGGAGTTTCTCA 59.358 45.455 0.00 0.00 31.08 3.27
4944 9511 1.699634 TGGGTCAAGCTAGAGCAACTT 59.300 47.619 4.01 0.00 45.16 2.66
4972 9539 7.388776 TGATGCAGCTTGATTTATGGTATACTC 59.611 37.037 2.53 0.00 0.00 2.59
4973 9540 5.997746 TGCAGCTTGATTTATGGTATACTCC 59.002 40.000 2.25 0.00 0.00 3.85
4974 9541 6.183361 TGCAGCTTGATTTATGGTATACTCCT 60.183 38.462 2.25 0.00 0.00 3.69
4975 9542 7.016170 TGCAGCTTGATTTATGGTATACTCCTA 59.984 37.037 2.25 0.00 0.00 2.94
4977 9544 8.589338 CAGCTTGATTTATGGTATACTCCTAGT 58.411 37.037 2.25 0.00 0.00 2.57
4978 9545 8.808092 AGCTTGATTTATGGTATACTCCTAGTC 58.192 37.037 2.25 0.00 0.00 2.59
4979 9546 8.585881 GCTTGATTTATGGTATACTCCTAGTCA 58.414 37.037 2.25 0.00 0.00 3.41
4984 9551 9.615660 ATTTATGGTATACTCCTAGTCATTCCA 57.384 33.333 2.25 0.00 0.00 3.53
4985 9552 6.919775 ATGGTATACTCCTAGTCATTCCAC 57.080 41.667 2.25 0.00 0.00 4.02
4986 9553 4.825634 TGGTATACTCCTAGTCATTCCACG 59.174 45.833 2.25 0.00 0.00 4.94
4987 9554 4.826183 GGTATACTCCTAGTCATTCCACGT 59.174 45.833 2.25 0.00 0.00 4.49
4988 9555 5.301298 GGTATACTCCTAGTCATTCCACGTT 59.699 44.000 2.25 0.00 0.00 3.99
4990 9557 4.189639 ACTCCTAGTCATTCCACGTTTC 57.810 45.455 0.00 0.00 0.00 2.78
4991 9558 3.576982 ACTCCTAGTCATTCCACGTTTCA 59.423 43.478 0.00 0.00 0.00 2.69
4993 9560 5.160607 TCCTAGTCATTCCACGTTTCATT 57.839 39.130 0.00 0.00 0.00 2.57
4995 9562 5.642063 TCCTAGTCATTCCACGTTTCATTTC 59.358 40.000 0.00 0.00 0.00 2.17
4997 9564 5.108385 AGTCATTCCACGTTTCATTTCAC 57.892 39.130 0.00 0.00 0.00 3.18
4998 9565 4.821805 AGTCATTCCACGTTTCATTTCACT 59.178 37.500 0.00 0.00 0.00 3.41
5001 9568 5.760743 TCATTCCACGTTTCATTTCACTGTA 59.239 36.000 0.00 0.00 0.00 2.74
5002 9569 6.429692 TCATTCCACGTTTCATTTCACTGTAT 59.570 34.615 0.00 0.00 0.00 2.29
5003 9570 5.605564 TCCACGTTTCATTTCACTGTATG 57.394 39.130 0.00 0.00 0.00 2.39
5006 9573 5.277779 CCACGTTTCATTTCACTGTATGTGT 60.278 40.000 0.00 0.00 46.27 3.72
5007 9574 5.620822 CACGTTTCATTTCACTGTATGTGTG 59.379 40.000 0.00 0.00 46.27 3.82
5008 9575 5.525745 ACGTTTCATTTCACTGTATGTGTGA 59.474 36.000 0.00 0.00 46.27 3.58
5009 9576 6.073369 CGTTTCATTTCACTGTATGTGTGAG 58.927 40.000 0.00 0.00 46.27 3.51
5010 9577 6.073819 CGTTTCATTTCACTGTATGTGTGAGA 60.074 38.462 0.00 0.00 46.27 3.27
5011 9578 7.518211 CGTTTCATTTCACTGTATGTGTGAGAA 60.518 37.037 0.00 0.00 46.27 2.87
5013 9580 7.425577 TCATTTCACTGTATGTGTGAGAAAG 57.574 36.000 0.00 0.00 46.27 2.62
5014 9581 7.216494 TCATTTCACTGTATGTGTGAGAAAGA 58.784 34.615 0.00 0.00 46.27 2.52
5015 9582 7.714813 TCATTTCACTGTATGTGTGAGAAAGAA 59.285 33.333 0.00 0.00 46.27 2.52
5017 9584 8.450578 TTTCACTGTATGTGTGAGAAAGAAAT 57.549 30.769 0.00 0.00 46.27 2.17
5018 9585 8.450578 TTCACTGTATGTGTGAGAAAGAAATT 57.549 30.769 0.00 0.00 46.27 1.82
5019 9586 9.554395 TTCACTGTATGTGTGAGAAAGAAATTA 57.446 29.630 0.00 0.00 46.27 1.40
5020 9587 9.208022 TCACTGTATGTGTGAGAAAGAAATTAG 57.792 33.333 0.00 0.00 46.27 1.73
5021 9588 8.993121 CACTGTATGTGTGAGAAAGAAATTAGT 58.007 33.333 0.00 0.00 41.53 2.24
5022 9589 8.993121 ACTGTATGTGTGAGAAAGAAATTAGTG 58.007 33.333 0.00 0.00 0.00 2.74
5023 9590 8.902540 TGTATGTGTGAGAAAGAAATTAGTGT 57.097 30.769 0.00 0.00 0.00 3.55
5024 9591 9.337396 TGTATGTGTGAGAAAGAAATTAGTGTT 57.663 29.630 0.00 0.00 0.00 3.32
5027 9594 8.450578 TGTGTGAGAAAGAAATTAGTGTTGAT 57.549 30.769 0.00 0.00 0.00 2.57
5028 9595 8.902806 TGTGTGAGAAAGAAATTAGTGTTGATT 58.097 29.630 0.00 0.00 0.00 2.57
5029 9596 9.387123 GTGTGAGAAAGAAATTAGTGTTGATTC 57.613 33.333 0.00 0.00 0.00 2.52
5041 9608 9.851686 AATTAGTGTTGATTCATATTAGGAGCA 57.148 29.630 0.00 0.00 0.00 4.26
5043 9610 9.851686 TTAGTGTTGATTCATATTAGGAGCATT 57.148 29.630 0.00 0.00 0.00 3.56
5044 9611 8.757982 AGTGTTGATTCATATTAGGAGCATTT 57.242 30.769 0.00 0.00 0.00 2.32
5045 9612 9.193806 AGTGTTGATTCATATTAGGAGCATTTT 57.806 29.630 0.00 0.00 0.00 1.82
5057 9624 8.782339 ATTAGGAGCATTTTTCAAATTTCAGG 57.218 30.769 0.00 0.00 0.00 3.86
5058 9625 6.178607 AGGAGCATTTTTCAAATTTCAGGT 57.821 33.333 0.00 0.00 0.00 4.00
5060 9627 7.910584 AGGAGCATTTTTCAAATTTCAGGTAT 58.089 30.769 0.00 0.00 0.00 2.73
5061 9628 8.037166 AGGAGCATTTTTCAAATTTCAGGTATC 58.963 33.333 0.00 0.00 0.00 2.24
5062 9629 8.037166 GGAGCATTTTTCAAATTTCAGGTATCT 58.963 33.333 0.00 0.00 0.00 1.98
5063 9630 9.428097 GAGCATTTTTCAAATTTCAGGTATCTT 57.572 29.630 0.00 0.00 0.00 2.40
5064 9631 9.211485 AGCATTTTTCAAATTTCAGGTATCTTG 57.789 29.630 0.00 0.00 0.00 3.02
5065 9632 9.206870 GCATTTTTCAAATTTCAGGTATCTTGA 57.793 29.630 0.00 0.00 0.00 3.02
5069 9636 9.912634 TTTTCAAATTTCAGGTATCTTGACATC 57.087 29.630 0.00 0.00 0.00 3.06
5071 9638 9.958180 TTCAAATTTCAGGTATCTTGACATCTA 57.042 29.630 0.00 0.00 0.00 1.98
5073 9640 8.331022 CAAATTTCAGGTATCTTGACATCTACG 58.669 37.037 0.00 0.00 0.00 3.51
5076 9643 4.276183 TCAGGTATCTTGACATCTACGAGC 59.724 45.833 0.00 0.00 0.00 5.03
5077 9644 3.570550 AGGTATCTTGACATCTACGAGCC 59.429 47.826 0.00 0.00 0.00 4.70
5078 9645 3.570550 GGTATCTTGACATCTACGAGCCT 59.429 47.826 0.00 0.00 0.00 4.58
5079 9646 4.320641 GGTATCTTGACATCTACGAGCCTC 60.321 50.000 0.00 0.00 0.00 4.70
5080 9647 3.006112 TCTTGACATCTACGAGCCTCT 57.994 47.619 0.00 0.00 0.00 3.69
5121 9688 1.001974 TGACAACCATCCAGTCCTTCG 59.998 52.381 0.00 0.00 0.00 3.79
5123 9690 0.321564 CAACCATCCAGTCCTTCGCA 60.322 55.000 0.00 0.00 0.00 5.10
5153 9720 5.491982 ACTGAATGGTATGAGGTGAAGTTC 58.508 41.667 0.00 0.00 0.00 3.01
5164 9731 0.868406 GTGAAGTTCGAAGCCACAGG 59.132 55.000 15.44 0.00 0.00 4.00
5166 9733 1.270305 TGAAGTTCGAAGCCACAGGAG 60.270 52.381 0.00 0.00 0.00 3.69
5168 9735 1.004440 GTTCGAAGCCACAGGAGCT 60.004 57.895 0.00 0.00 44.19 4.09
5170 9737 0.532573 TTCGAAGCCACAGGAGCTAG 59.467 55.000 0.00 0.00 40.49 3.42
5198 9789 1.203038 TCCACAACTCCATGGTGCATT 60.203 47.619 12.58 0.00 36.69 3.56
5202 9793 3.056393 CACAACTCCATGGTGCATTTGAT 60.056 43.478 12.58 0.00 36.69 2.57
5205 9796 2.756760 ACTCCATGGTGCATTTGATGTC 59.243 45.455 12.58 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.443869 CCTCGAAAACGACAGCATGG 59.556 55.000 0.00 0.00 43.62 3.66
10 11 3.493129 CAGTCAAATCCTCGAAAACGACA 59.507 43.478 0.00 0.00 0.00 4.35
102 103 4.502259 GGATGATTACAGTAGTGGCTCAGG 60.502 50.000 1.92 0.00 0.00 3.86
208 209 2.691011 GGTGGTTCAAACAACTAAGCCA 59.309 45.455 0.69 0.00 33.27 4.75
267 268 9.647797 CTGCCACCGATTAATGTATAATAGTAA 57.352 33.333 0.00 0.00 0.00 2.24
314 315 0.795085 CTCTGCTGCACTCTTTTCCG 59.205 55.000 0.00 0.00 0.00 4.30
327 328 3.068024 GCTAGACTGATTACAGCTCTGCT 59.932 47.826 0.00 0.00 46.95 4.24
339 340 3.347077 AGCAAAGCAAGCTAGACTGAT 57.653 42.857 0.00 0.00 41.32 2.90
383 384 2.443632 AGATCTCAGATCTCCGGGTGTA 59.556 50.000 11.79 0.00 0.00 2.90
534 536 3.382832 CCGACGAGGAGGCCAACT 61.383 66.667 5.01 1.01 45.00 3.16
573 575 6.653273 AGAGACGATGTGAATGTTAATGTG 57.347 37.500 0.00 0.00 0.00 3.21
574 576 6.477033 GCTAGAGACGATGTGAATGTTAATGT 59.523 38.462 0.00 0.00 0.00 2.71
699 707 5.536916 TCACGGGAGTTCAACCATTAATTTT 59.463 36.000 0.00 0.00 44.67 1.82
774 785 7.251321 AGAGAATTAGATCAACTTCACCAGT 57.749 36.000 0.00 0.00 37.30 4.00
814 840 5.401531 AGCTCGTCTTTAATGAACCTACA 57.598 39.130 0.00 0.00 0.00 2.74
879 905 3.439476 CCTTGAGGAGCACATCTTTCTTG 59.561 47.826 0.00 0.00 37.39 3.02
979 1005 0.320946 AGCCGGCGTAACAAGCTTTA 60.321 50.000 23.20 0.00 34.52 1.85
1023 1049 1.647545 CGCGGATCTGTGTGGCAATT 61.648 55.000 6.95 0.00 0.00 2.32
1146 1172 0.652592 CCGAGTGATTGCGAACATCC 59.347 55.000 0.00 0.00 0.00 3.51
1206 1232 7.447594 TCAACTTAATTAACTCCTTCTTCGGT 58.552 34.615 0.00 0.00 0.00 4.69
1366 1392 0.716108 GTTTGCGAGACTGTGATCCG 59.284 55.000 0.00 0.00 0.00 4.18
1710 1745 8.829612 CCAATCTTTTTCAGTAGCAAATTTGTT 58.170 29.630 19.03 15.74 0.00 2.83
1748 1783 6.867662 TCCTTTCATCACTTTCAGTTTCTC 57.132 37.500 0.00 0.00 0.00 2.87
1755 1790 2.749076 CCGCATCCTTTCATCACTTTCA 59.251 45.455 0.00 0.00 0.00 2.69
2020 2056 3.815401 ACCAAACGTCTTCTCCTGATTTG 59.185 43.478 0.00 0.00 0.00 2.32
2202 2241 5.586243 AGAAATTGAGACCATTACATCACGG 59.414 40.000 0.00 0.00 0.00 4.94
2371 2418 0.985490 GAGGGCTCCATGGGTCTCTT 60.985 60.000 13.02 0.00 0.00 2.85
2621 2696 4.892934 GGAGACTATGGAGTTCTGTGATCT 59.107 45.833 0.00 0.00 35.45 2.75
2628 2703 2.028130 CTGCGGAGACTATGGAGTTCT 58.972 52.381 0.00 0.00 35.45 3.01
2698 2776 1.065926 GTGCATCAGACAGTCCATGGA 60.066 52.381 11.44 11.44 0.00 3.41
2778 2856 2.965147 TGCCATATGTAGCTCAGCAGTA 59.035 45.455 0.00 0.00 0.00 2.74
2810 2888 1.140852 CACCTTCTGTCTTGGACCACA 59.859 52.381 0.00 0.00 0.00 4.17
2952 6373 7.630513 GCAAATTTTCCTTTAGCTACCATGCTA 60.631 37.037 0.00 0.00 43.74 3.49
2988 6409 5.246203 GGCACACAGATATAGTATCTTGGGA 59.754 44.000 11.85 0.00 0.00 4.37
2990 6411 5.164233 CGGCACACAGATATAGTATCTTGG 58.836 45.833 0.00 0.00 0.00 3.61
3006 6427 1.067821 AGCTTCTCTATAGCGGCACAC 59.932 52.381 1.45 0.00 43.37 3.82
3015 6436 3.745799 CAGGGACGAGAGCTTCTCTATA 58.254 50.000 10.25 0.00 41.35 1.31
3030 6451 0.179124 CACTAAGAGAGCGCAGGGAC 60.179 60.000 11.47 0.00 0.00 4.46
3055 6476 5.855740 TCATTGGCAGCATCATAATCAAA 57.144 34.783 0.00 0.00 0.00 2.69
3060 6481 3.834938 TCCATCATTGGCAGCATCATAA 58.165 40.909 0.00 0.00 43.29 1.90
3063 6484 2.235891 GATCCATCATTGGCAGCATCA 58.764 47.619 0.00 0.00 43.29 3.07
3087 6508 5.241728 GGAGGAAATATTATGCAACCACTCC 59.758 44.000 0.00 0.00 33.68 3.85
3220 6644 6.047870 CAGTTATCTGATCTTCCTTCAGGTG 58.952 44.000 0.00 0.00 43.76 4.00
3290 6714 9.956720 CTAACTTCTTCCCATAATAAGCAAATG 57.043 33.333 0.00 0.00 0.00 2.32
3361 6785 1.446907 CTCAGTTTACCCAGCTGCTG 58.553 55.000 22.44 22.44 0.00 4.41
3363 6787 0.678048 CCCTCAGTTTACCCAGCTGC 60.678 60.000 8.66 0.00 0.00 5.25
3366 6790 0.253327 CCTCCCTCAGTTTACCCAGC 59.747 60.000 0.00 0.00 0.00 4.85
3470 6894 4.041567 TCTGCTTGAATACTGGAAGGTGAA 59.958 41.667 0.00 0.00 39.30 3.18
3483 6907 5.796424 AACCAAGTGAAATCTGCTTGAAT 57.204 34.783 14.98 5.33 41.31 2.57
3484 6908 6.489700 TCATAACCAAGTGAAATCTGCTTGAA 59.510 34.615 14.98 5.73 41.31 2.69
3580 7004 1.618837 CTCCCTTCGGTCTCTGTTGAA 59.381 52.381 0.00 0.00 0.00 2.69
3597 7022 0.179051 CCTCCTCTGCTTCATGCTCC 60.179 60.000 0.00 0.00 43.37 4.70
3606 7031 2.676822 TTCGTCGCCTCCTCTGCT 60.677 61.111 0.00 0.00 0.00 4.24
3607 7032 2.507324 GTTCGTCGCCTCCTCTGC 60.507 66.667 0.00 0.00 0.00 4.26
3608 7033 2.182030 GGTTCGTCGCCTCCTCTG 59.818 66.667 0.00 0.00 0.00 3.35
3609 7034 2.035940 AGGTTCGTCGCCTCCTCT 59.964 61.111 0.00 0.00 0.00 3.69
3642 7172 8.585471 ATGCTCCTTGAATAAAAGAGATGAAA 57.415 30.769 0.00 0.00 0.00 2.69
3646 7176 7.344913 ACTGATGCTCCTTGAATAAAAGAGAT 58.655 34.615 0.00 0.00 0.00 2.75
3711 7264 1.608055 TGTCATGGTCTTGGCTGTTG 58.392 50.000 0.00 0.00 0.00 3.33
3787 7341 2.618241 CAGCAACTAGAAACTTGCACCA 59.382 45.455 15.68 0.00 44.42 4.17
3793 7347 6.471146 ACAGATGATCAGCAACTAGAAACTT 58.529 36.000 14.38 0.00 0.00 2.66
3860 7414 6.687655 CGCGAGAAGTTAGATGTAAAGAAAG 58.312 40.000 0.00 0.00 0.00 2.62
3884 7438 6.586082 ACATTTCTACAAATCAATCAAACGGC 59.414 34.615 0.00 0.00 28.97 5.68
3924 7805 3.262420 AGTATGTCTTTGCCAAGCTACG 58.738 45.455 0.00 0.00 0.00 3.51
3928 7809 3.671702 GCTTGAGTATGTCTTTGCCAAGC 60.672 47.826 0.00 0.00 44.97 4.01
3929 7810 3.503363 TGCTTGAGTATGTCTTTGCCAAG 59.497 43.478 0.00 0.00 34.39 3.61
3959 7840 5.473039 TGCACCGAAGACATAGATATGATG 58.527 41.667 6.84 0.00 37.15 3.07
3968 7849 1.412710 GGGATCTGCACCGAAGACATA 59.587 52.381 0.00 0.00 0.00 2.29
3987 7868 8.006298 ACAGTATGATACAGAGAGAAGAAAGG 57.994 38.462 5.28 0.00 39.69 3.11
4029 7910 8.844244 GTGCATATACAAGGATTTCTTTCAGAT 58.156 33.333 0.00 0.00 32.41 2.90
4057 7939 8.289618 ACATTTTGTACTGCAGTTAACACTATG 58.710 33.333 27.06 25.47 0.00 2.23
4061 7943 8.844441 TTTACATTTTGTACTGCAGTTAACAC 57.156 30.769 27.06 17.43 31.69 3.32
4078 7960 9.457436 AGTCGGAATGGTACTAATTTTACATTT 57.543 29.630 0.00 0.00 0.00 2.32
4079 7961 9.106070 GAGTCGGAATGGTACTAATTTTACATT 57.894 33.333 0.00 0.00 0.00 2.71
4080 7962 8.483758 AGAGTCGGAATGGTACTAATTTTACAT 58.516 33.333 0.00 0.00 0.00 2.29
4081 7963 7.844009 AGAGTCGGAATGGTACTAATTTTACA 58.156 34.615 0.00 0.00 0.00 2.41
4082 7964 8.713737 AAGAGTCGGAATGGTACTAATTTTAC 57.286 34.615 0.00 0.00 0.00 2.01
4083 7965 9.807649 GTAAGAGTCGGAATGGTACTAATTTTA 57.192 33.333 0.00 0.00 0.00 1.52
4086 7968 6.381994 TGGTAAGAGTCGGAATGGTACTAATT 59.618 38.462 0.00 0.00 0.00 1.40
4088 7970 5.263599 TGGTAAGAGTCGGAATGGTACTAA 58.736 41.667 0.00 0.00 0.00 2.24
4089 7971 4.858850 TGGTAAGAGTCGGAATGGTACTA 58.141 43.478 0.00 0.00 0.00 1.82
4093 7975 5.687166 TTAATGGTAAGAGTCGGAATGGT 57.313 39.130 0.00 0.00 0.00 3.55
4094 7976 8.148351 TCTAATTAATGGTAAGAGTCGGAATGG 58.852 37.037 0.00 0.00 0.00 3.16
4095 7977 9.542462 TTCTAATTAATGGTAAGAGTCGGAATG 57.458 33.333 0.00 0.00 0.00 2.67
4097 7979 9.947433 TTTTCTAATTAATGGTAAGAGTCGGAA 57.053 29.630 0.00 0.00 0.00 4.30
4107 8465 9.627123 CAGATCCCAGTTTTCTAATTAATGGTA 57.373 33.333 0.00 0.00 0.00 3.25
4115 8473 6.627087 TGAGACAGATCCCAGTTTTCTAAT 57.373 37.500 0.00 0.00 0.00 1.73
4116 8474 6.433847 TTGAGACAGATCCCAGTTTTCTAA 57.566 37.500 0.00 0.00 0.00 2.10
4117 8475 6.433847 TTTGAGACAGATCCCAGTTTTCTA 57.566 37.500 0.00 0.00 0.00 2.10
4119 8477 5.278512 GGTTTTGAGACAGATCCCAGTTTTC 60.279 44.000 0.00 0.00 0.00 2.29
4158 8516 7.230027 ACAGAAAAGACTTCTTCAGATTCCAT 58.770 34.615 10.65 0.00 34.61 3.41
4180 8538 5.050567 GTCCTGTAAAGTTTGGTAACGACAG 60.051 44.000 0.00 2.16 40.35 3.51
4235 8593 3.609853 GTCCATTATGTGTTGCTCCAGA 58.390 45.455 0.00 0.00 0.00 3.86
4236 8594 2.684881 GGTCCATTATGTGTTGCTCCAG 59.315 50.000 0.00 0.00 0.00 3.86
4238 8596 3.004752 AGGTCCATTATGTGTTGCTCC 57.995 47.619 0.00 0.00 0.00 4.70
4240 8598 3.758554 GTCAAGGTCCATTATGTGTTGCT 59.241 43.478 0.00 0.00 0.00 3.91
4244 8602 6.122277 CCATTAGTCAAGGTCCATTATGTGT 58.878 40.000 0.00 0.00 0.00 3.72
4245 8603 6.038603 CACCATTAGTCAAGGTCCATTATGTG 59.961 42.308 0.00 0.00 32.15 3.21
4247 8605 5.009010 GCACCATTAGTCAAGGTCCATTATG 59.991 44.000 0.00 0.00 32.15 1.90
4248 8606 5.133221 GCACCATTAGTCAAGGTCCATTAT 58.867 41.667 0.00 0.00 32.15 1.28
4249 8607 4.018870 TGCACCATTAGTCAAGGTCCATTA 60.019 41.667 0.00 0.00 32.15 1.90
4251 8609 2.308570 TGCACCATTAGTCAAGGTCCAT 59.691 45.455 0.00 0.00 32.15 3.41
4252 8610 1.702401 TGCACCATTAGTCAAGGTCCA 59.298 47.619 0.00 0.00 32.15 4.02
4253 8611 2.084546 GTGCACCATTAGTCAAGGTCC 58.915 52.381 5.22 0.00 32.15 4.46
4255 8613 2.106511 ACAGTGCACCATTAGTCAAGGT 59.893 45.455 14.63 0.00 35.65 3.50
4256 8614 2.744202 GACAGTGCACCATTAGTCAAGG 59.256 50.000 14.63 0.00 0.00 3.61
4260 8618 3.127548 CCAATGACAGTGCACCATTAGTC 59.872 47.826 14.63 13.99 0.00 2.59
4261 8619 3.084039 CCAATGACAGTGCACCATTAGT 58.916 45.455 14.63 4.66 0.00 2.24
4262 8620 3.084039 ACCAATGACAGTGCACCATTAG 58.916 45.455 14.63 11.59 0.00 1.73
4263 8621 3.081061 GACCAATGACAGTGCACCATTA 58.919 45.455 14.63 0.00 0.00 1.90
4264 8622 1.888512 GACCAATGACAGTGCACCATT 59.111 47.619 14.63 13.26 0.00 3.16
4267 8625 0.537143 TGGACCAATGACAGTGCACC 60.537 55.000 14.63 0.00 28.55 5.01
4268 8626 1.317613 TTGGACCAATGACAGTGCAC 58.682 50.000 9.40 9.40 33.79 4.57
4272 8630 4.379652 GCAAATTTTGGACCAATGACAGT 58.620 39.130 7.99 0.00 0.00 3.55
4273 8631 3.429543 CGCAAATTTTGGACCAATGACAG 59.570 43.478 7.99 0.13 0.00 3.51
4274 8632 3.388308 CGCAAATTTTGGACCAATGACA 58.612 40.909 7.99 0.00 0.00 3.58
4275 8633 2.736192 CCGCAAATTTTGGACCAATGAC 59.264 45.455 7.99 0.00 0.00 3.06
4277 8635 1.464219 GCCGCAAATTTTGGACCAATG 59.536 47.619 7.99 4.41 0.00 2.82
4278 8636 1.071385 TGCCGCAAATTTTGGACCAAT 59.929 42.857 7.99 0.00 0.00 3.16
4281 8639 0.670239 CCTGCCGCAAATTTTGGACC 60.670 55.000 10.96 0.00 0.00 4.46
4282 8640 0.033366 ACCTGCCGCAAATTTTGGAC 59.967 50.000 10.96 3.13 0.00 4.02
4283 8641 0.755686 AACCTGCCGCAAATTTTGGA 59.244 45.000 10.96 0.00 0.00 3.53
4284 8642 2.065512 GTAACCTGCCGCAAATTTTGG 58.934 47.619 10.96 2.42 0.00 3.28
4285 8643 3.025287 AGTAACCTGCCGCAAATTTTG 57.975 42.857 4.72 4.72 0.00 2.44
4287 8645 2.163613 GCTAGTAACCTGCCGCAAATTT 59.836 45.455 0.00 0.00 0.00 1.82
4288 8646 1.743394 GCTAGTAACCTGCCGCAAATT 59.257 47.619 0.00 0.00 0.00 1.82
4290 8648 0.323629 AGCTAGTAACCTGCCGCAAA 59.676 50.000 0.00 0.00 0.00 3.68
4291 8649 0.323629 AAGCTAGTAACCTGCCGCAA 59.676 50.000 0.00 0.00 0.00 4.85
4295 8653 1.740025 CTTGCAAGCTAGTAACCTGCC 59.260 52.381 14.65 0.00 0.00 4.85
4297 8655 3.686726 CCTTCTTGCAAGCTAGTAACCTG 59.313 47.826 21.99 4.14 0.00 4.00
4298 8656 3.870299 GCCTTCTTGCAAGCTAGTAACCT 60.870 47.826 21.99 0.00 0.00 3.50
4299 8657 2.420372 GCCTTCTTGCAAGCTAGTAACC 59.580 50.000 21.99 5.92 0.00 2.85
4300 8658 3.074412 TGCCTTCTTGCAAGCTAGTAAC 58.926 45.455 21.99 12.13 38.56 2.50
4301 8659 3.417069 TGCCTTCTTGCAAGCTAGTAA 57.583 42.857 21.99 9.31 38.56 2.24
4310 8668 0.892358 CCTCTGCTTGCCTTCTTGCA 60.892 55.000 0.00 0.00 40.07 4.08
4311 8669 0.607489 TCCTCTGCTTGCCTTCTTGC 60.607 55.000 0.00 0.00 0.00 4.01
4312 8670 1.811359 CTTCCTCTGCTTGCCTTCTTG 59.189 52.381 0.00 0.00 0.00 3.02
4313 8671 1.271817 CCTTCCTCTGCTTGCCTTCTT 60.272 52.381 0.00 0.00 0.00 2.52
4315 8673 0.037447 ACCTTCCTCTGCTTGCCTTC 59.963 55.000 0.00 0.00 0.00 3.46
4317 8675 1.003696 GTTACCTTCCTCTGCTTGCCT 59.996 52.381 0.00 0.00 0.00 4.75
4318 8676 1.003696 AGTTACCTTCCTCTGCTTGCC 59.996 52.381 0.00 0.00 0.00 4.52
4319 8677 2.351455 GAGTTACCTTCCTCTGCTTGC 58.649 52.381 0.00 0.00 0.00 4.01
4320 8678 2.979240 GGAGTTACCTTCCTCTGCTTG 58.021 52.381 0.00 0.00 35.41 4.01
4332 8690 2.420687 CCAGGAAGCATCAGGAGTTACC 60.421 54.545 0.00 0.00 39.35 2.85
4333 8691 2.911484 CCAGGAAGCATCAGGAGTTAC 58.089 52.381 0.00 0.00 0.00 2.50
4334 8692 1.210478 GCCAGGAAGCATCAGGAGTTA 59.790 52.381 4.11 0.00 0.00 2.24
4335 8693 0.034670 GCCAGGAAGCATCAGGAGTT 60.035 55.000 4.11 0.00 0.00 3.01
4337 8695 1.605992 TGCCAGGAAGCATCAGGAG 59.394 57.895 4.11 0.00 38.00 3.69
4338 8696 3.824815 TGCCAGGAAGCATCAGGA 58.175 55.556 4.11 0.00 38.00 3.86
4345 8703 7.267857 ACTTGAATTAATTAATGCCAGGAAGC 58.732 34.615 17.51 0.00 0.00 3.86
4346 8704 8.469200 TGACTTGAATTAATTAATGCCAGGAAG 58.531 33.333 17.51 13.86 0.00 3.46
4347 8705 8.359875 TGACTTGAATTAATTAATGCCAGGAA 57.640 30.769 17.51 6.27 0.00 3.36
4362 8720 9.753674 TTCCTTTCTACCATAATGACTTGAATT 57.246 29.630 0.00 0.00 0.00 2.17
4363 8721 9.927081 ATTCCTTTCTACCATAATGACTTGAAT 57.073 29.630 0.00 0.00 0.00 2.57
4364 8722 9.396022 GATTCCTTTCTACCATAATGACTTGAA 57.604 33.333 0.00 0.00 0.00 2.69
4365 8723 8.548025 TGATTCCTTTCTACCATAATGACTTGA 58.452 33.333 0.00 0.00 0.00 3.02
4366 8724 8.737168 TGATTCCTTTCTACCATAATGACTTG 57.263 34.615 0.00 0.00 0.00 3.16
4367 8725 7.500559 GCTGATTCCTTTCTACCATAATGACTT 59.499 37.037 0.00 0.00 0.00 3.01
4368 8726 6.995091 GCTGATTCCTTTCTACCATAATGACT 59.005 38.462 0.00 0.00 0.00 3.41
4369 8727 6.073548 CGCTGATTCCTTTCTACCATAATGAC 60.074 42.308 0.00 0.00 0.00 3.06
4370 8728 5.991606 CGCTGATTCCTTTCTACCATAATGA 59.008 40.000 0.00 0.00 0.00 2.57
4371 8729 5.760253 ACGCTGATTCCTTTCTACCATAATG 59.240 40.000 0.00 0.00 0.00 1.90
4372 8730 5.930135 ACGCTGATTCCTTTCTACCATAAT 58.070 37.500 0.00 0.00 0.00 1.28
4374 8732 5.105106 TGAACGCTGATTCCTTTCTACCATA 60.105 40.000 0.00 0.00 0.00 2.74
4376 8734 3.007506 TGAACGCTGATTCCTTTCTACCA 59.992 43.478 0.00 0.00 0.00 3.25
4377 8735 3.596214 TGAACGCTGATTCCTTTCTACC 58.404 45.455 0.00 0.00 0.00 3.18
4378 8736 5.351465 TGAATGAACGCTGATTCCTTTCTAC 59.649 40.000 0.00 0.00 0.00 2.59
4379 8737 5.487433 TGAATGAACGCTGATTCCTTTCTA 58.513 37.500 0.00 0.00 0.00 2.10
4380 8738 4.326826 TGAATGAACGCTGATTCCTTTCT 58.673 39.130 0.00 0.00 0.00 2.52
4383 8741 3.942829 TCTGAATGAACGCTGATTCCTT 58.057 40.909 0.00 0.00 0.00 3.36
4384 8742 3.616956 TCTGAATGAACGCTGATTCCT 57.383 42.857 0.00 0.00 0.00 3.36
4385 8743 4.497006 CCATTCTGAATGAACGCTGATTCC 60.497 45.833 27.42 0.00 41.46 3.01
4386 8744 4.595116 CCATTCTGAATGAACGCTGATTC 58.405 43.478 27.42 0.00 41.46 2.52
4387 8745 3.181493 GCCATTCTGAATGAACGCTGATT 60.181 43.478 27.42 0.00 41.46 2.57
4388 8746 2.357009 GCCATTCTGAATGAACGCTGAT 59.643 45.455 27.42 0.00 41.46 2.90
4389 8747 1.739466 GCCATTCTGAATGAACGCTGA 59.261 47.619 27.42 0.00 41.46 4.26
4390 8748 1.530441 CGCCATTCTGAATGAACGCTG 60.530 52.381 27.42 15.54 41.46 5.18
4391 8749 0.729116 CGCCATTCTGAATGAACGCT 59.271 50.000 27.42 0.00 41.46 5.07
4394 8752 0.101219 GCCCGCCATTCTGAATGAAC 59.899 55.000 27.42 18.59 41.46 3.18
4401 8759 0.458889 CAAACATGCCCGCCATTCTG 60.459 55.000 0.00 0.00 29.71 3.02
4403 8761 0.246086 TTCAAACATGCCCGCCATTC 59.754 50.000 0.00 0.00 29.71 2.67
4404 8762 0.683973 TTTCAAACATGCCCGCCATT 59.316 45.000 0.00 0.00 29.71 3.16
4405 8763 0.903942 ATTTCAAACATGCCCGCCAT 59.096 45.000 0.00 0.00 33.39 4.40
4406 8764 0.683973 AATTTCAAACATGCCCGCCA 59.316 45.000 0.00 0.00 0.00 5.69
4407 8765 1.731709 GAAATTTCAAACATGCCCGCC 59.268 47.619 13.40 0.00 0.00 6.13
4409 8767 2.995258 CCTGAAATTTCAAACATGCCCG 59.005 45.455 20.82 6.79 36.64 6.13
4410 8768 2.743664 GCCTGAAATTTCAAACATGCCC 59.256 45.455 20.82 1.20 36.64 5.36
4411 8769 3.401182 TGCCTGAAATTTCAAACATGCC 58.599 40.909 20.82 0.83 36.64 4.40
4412 8770 4.933400 AGATGCCTGAAATTTCAAACATGC 59.067 37.500 27.60 20.94 36.64 4.06
4413 8771 6.647481 TGAAGATGCCTGAAATTTCAAACATG 59.353 34.615 27.60 15.37 36.64 3.21
4419 8777 9.803507 ATAGATATGAAGATGCCTGAAATTTCA 57.196 29.630 19.45 19.45 35.57 2.69
4424 8782 6.877855 GCTCATAGATATGAAGATGCCTGAAA 59.122 38.462 4.23 0.00 41.72 2.69
4425 8783 6.404708 GCTCATAGATATGAAGATGCCTGAA 58.595 40.000 4.23 0.00 41.72 3.02
4426 8784 5.105023 GGCTCATAGATATGAAGATGCCTGA 60.105 44.000 17.33 0.00 42.44 3.86
4427 8785 5.117584 GGCTCATAGATATGAAGATGCCTG 58.882 45.833 17.33 2.12 42.44 4.85
4428 8786 4.163839 GGGCTCATAGATATGAAGATGCCT 59.836 45.833 21.04 0.00 43.88 4.75
4429 8787 4.080695 TGGGCTCATAGATATGAAGATGCC 60.081 45.833 16.73 16.73 43.77 4.40
4430 8788 5.095145 TGGGCTCATAGATATGAAGATGC 57.905 43.478 4.23 4.20 41.72 3.91
4431 8789 6.944096 TCTTGGGCTCATAGATATGAAGATG 58.056 40.000 4.23 0.00 41.72 2.90
4432 8790 6.958778 TCTCTTGGGCTCATAGATATGAAGAT 59.041 38.462 4.23 0.00 41.72 2.40
4433 8791 6.318112 TCTCTTGGGCTCATAGATATGAAGA 58.682 40.000 4.23 3.38 41.72 2.87
4434 8792 6.602410 TCTCTTGGGCTCATAGATATGAAG 57.398 41.667 4.23 0.00 41.72 3.02
4436 8794 6.259123 TCATCTCTTGGGCTCATAGATATGA 58.741 40.000 16.04 16.04 40.19 2.15
4437 8795 6.541934 TCATCTCTTGGGCTCATAGATATG 57.458 41.667 10.71 12.22 35.04 1.78
4438 8796 7.565190 TTTCATCTCTTGGGCTCATAGATAT 57.435 36.000 10.71 2.38 29.95 1.63
4440 8798 5.901413 TTTCATCTCTTGGGCTCATAGAT 57.099 39.130 6.20 6.20 30.65 1.98
4441 8799 5.367644 TCATTTCATCTCTTGGGCTCATAGA 59.632 40.000 1.90 1.90 0.00 1.98
4442 8800 5.618236 TCATTTCATCTCTTGGGCTCATAG 58.382 41.667 0.00 0.00 0.00 2.23
4443 8801 5.635278 TCATTTCATCTCTTGGGCTCATA 57.365 39.130 0.00 0.00 0.00 2.15
4447 8805 3.022406 GCTTCATTTCATCTCTTGGGCT 58.978 45.455 0.00 0.00 0.00 5.19
4449 8807 3.380637 CCTGCTTCATTTCATCTCTTGGG 59.619 47.826 0.00 0.00 0.00 4.12
4450 8808 4.267536 TCCTGCTTCATTTCATCTCTTGG 58.732 43.478 0.00 0.00 0.00 3.61
4451 8809 5.676584 GCTTCCTGCTTCATTTCATCTCTTG 60.677 44.000 0.00 0.00 38.95 3.02
4452 8810 4.398673 GCTTCCTGCTTCATTTCATCTCTT 59.601 41.667 0.00 0.00 38.95 2.85
4454 8812 3.066481 GGCTTCCTGCTTCATTTCATCTC 59.934 47.826 0.00 0.00 42.39 2.75
4455 8813 3.022406 GGCTTCCTGCTTCATTTCATCT 58.978 45.455 0.00 0.00 42.39 2.90
4456 8814 2.756760 TGGCTTCCTGCTTCATTTCATC 59.243 45.455 0.00 0.00 42.39 2.92
4457 8815 2.494870 GTGGCTTCCTGCTTCATTTCAT 59.505 45.455 0.00 0.00 42.39 2.57
4461 8819 1.542492 CTGTGGCTTCCTGCTTCATT 58.458 50.000 0.00 0.00 42.39 2.57
4463 8821 1.073722 CCTGTGGCTTCCTGCTTCA 59.926 57.895 0.00 0.00 42.39 3.02
4464 8822 2.338785 GCCTGTGGCTTCCTGCTTC 61.339 63.158 0.73 0.00 46.69 3.86
4465 8823 2.282745 GCCTGTGGCTTCCTGCTT 60.283 61.111 0.73 0.00 46.69 3.91
4481 8839 4.357947 TGTCGTCGAGGCACCAGC 62.358 66.667 0.00 0.00 41.10 4.85
4486 8844 1.977009 ATGGAGTGTCGTCGAGGCA 60.977 57.895 0.00 0.00 0.00 4.75
4487 8845 1.517257 CATGGAGTGTCGTCGAGGC 60.517 63.158 0.00 0.00 0.00 4.70
4488 8846 0.456824 CACATGGAGTGTCGTCGAGG 60.457 60.000 0.00 0.00 43.40 4.63
4498 8856 2.039480 ACACTTCAGATGCACATGGAGT 59.961 45.455 7.91 7.91 35.57 3.85
4499 8857 2.418976 CACACTTCAGATGCACATGGAG 59.581 50.000 6.72 6.72 0.00 3.86
4500 8858 2.038820 TCACACTTCAGATGCACATGGA 59.961 45.455 0.00 0.00 0.00 3.41
4501 8859 2.429478 TCACACTTCAGATGCACATGG 58.571 47.619 0.00 0.00 0.00 3.66
4503 8861 2.816087 GGTTCACACTTCAGATGCACAT 59.184 45.455 0.00 0.00 0.00 3.21
4505 8863 1.195448 CGGTTCACACTTCAGATGCAC 59.805 52.381 0.00 0.00 0.00 4.57
4506 8864 1.069978 TCGGTTCACACTTCAGATGCA 59.930 47.619 0.00 0.00 0.00 3.96
4507 8865 1.795768 TCGGTTCACACTTCAGATGC 58.204 50.000 0.00 0.00 0.00 3.91
4508 8866 5.351458 TGATATCGGTTCACACTTCAGATG 58.649 41.667 0.00 0.00 0.00 2.90
4509 8867 5.598416 TGATATCGGTTCACACTTCAGAT 57.402 39.130 0.00 0.00 0.00 2.90
4511 8869 4.747108 GGATGATATCGGTTCACACTTCAG 59.253 45.833 0.00 0.00 0.00 3.02
4514 8872 4.405680 TGAGGATGATATCGGTTCACACTT 59.594 41.667 0.00 0.00 0.00 3.16
4515 8873 3.960755 TGAGGATGATATCGGTTCACACT 59.039 43.478 0.00 0.00 0.00 3.55
4516 8874 4.322080 TGAGGATGATATCGGTTCACAC 57.678 45.455 0.00 0.00 0.00 3.82
4517 8875 6.267699 AGTTATGAGGATGATATCGGTTCACA 59.732 38.462 0.00 0.00 0.00 3.58
4518 8876 6.587990 CAGTTATGAGGATGATATCGGTTCAC 59.412 42.308 0.00 0.00 0.00 3.18
4519 8877 6.295292 CCAGTTATGAGGATGATATCGGTTCA 60.295 42.308 0.00 0.41 0.00 3.18
4520 8878 6.102663 CCAGTTATGAGGATGATATCGGTTC 58.897 44.000 0.00 0.00 0.00 3.62
4521 8879 5.544176 ACCAGTTATGAGGATGATATCGGTT 59.456 40.000 0.00 0.00 0.00 4.44
4522 8880 5.087323 ACCAGTTATGAGGATGATATCGGT 58.913 41.667 0.00 0.00 0.00 4.69
4525 8883 7.238486 ACTGACCAGTTATGAGGATGATATC 57.762 40.000 0.00 0.00 38.83 1.63
4541 8899 3.545703 AGTTGGTTTCTGAACTGACCAG 58.454 45.455 11.17 0.00 42.60 4.00
4543 8901 2.879026 GGAGTTGGTTTCTGAACTGACC 59.121 50.000 3.33 3.33 36.03 4.02
4544 8902 3.809905 AGGAGTTGGTTTCTGAACTGAC 58.190 45.455 0.00 0.00 36.03 3.51
4545 8903 4.503714 AAGGAGTTGGTTTCTGAACTGA 57.496 40.909 0.00 0.00 36.03 3.41
4620 9150 1.382522 ATATGTTTGCAGGCCGACAG 58.617 50.000 0.00 0.00 0.00 3.51
4680 9247 2.421952 GCATATCTTGAGAGGCCACCAA 60.422 50.000 5.01 4.83 0.00 3.67
4697 9264 5.047306 CCACCTAATCTAATCACGGAGCATA 60.047 44.000 0.00 0.00 0.00 3.14
4699 9266 3.069586 CCACCTAATCTAATCACGGAGCA 59.930 47.826 0.00 0.00 0.00 4.26
4707 9274 2.810852 GCAGCTGCCACCTAATCTAATC 59.189 50.000 28.76 0.00 34.31 1.75
4710 9277 1.139654 CAGCAGCTGCCACCTAATCTA 59.860 52.381 34.39 0.00 43.38 1.98
4727 9294 2.194326 GAGGGAATCAGGGCCAGC 59.806 66.667 6.18 0.00 0.00 4.85
4730 9297 1.863155 TTGGTGAGGGAATCAGGGCC 61.863 60.000 0.00 0.00 39.07 5.80
4819 9386 7.703058 ACATTACCAGAGGTTAAAATCCAAG 57.297 36.000 0.00 0.00 37.09 3.61
4820 9387 7.507616 ACAACATTACCAGAGGTTAAAATCCAA 59.492 33.333 0.00 0.00 37.09 3.53
4832 9399 4.207891 AGCAGGTACAACATTACCAGAG 57.792 45.455 0.00 0.00 43.73 3.35
4833 9400 4.286032 AGAAGCAGGTACAACATTACCAGA 59.714 41.667 0.00 0.00 43.73 3.86
4834 9401 4.579869 AGAAGCAGGTACAACATTACCAG 58.420 43.478 0.00 0.00 43.73 4.00
4835 9402 4.041075 TGAGAAGCAGGTACAACATTACCA 59.959 41.667 0.00 0.00 43.73 3.25
4836 9403 4.392138 GTGAGAAGCAGGTACAACATTACC 59.608 45.833 0.00 0.00 41.86 2.85
4837 9404 4.392138 GGTGAGAAGCAGGTACAACATTAC 59.608 45.833 0.00 0.00 0.00 1.89
4838 9405 4.041075 TGGTGAGAAGCAGGTACAACATTA 59.959 41.667 0.00 0.00 0.00 1.90
4839 9406 3.181445 TGGTGAGAAGCAGGTACAACATT 60.181 43.478 0.00 0.00 0.00 2.71
4840 9407 2.371841 TGGTGAGAAGCAGGTACAACAT 59.628 45.455 0.00 0.00 0.00 2.71
4841 9408 1.765904 TGGTGAGAAGCAGGTACAACA 59.234 47.619 0.00 0.00 0.00 3.33
4842 9409 2.543777 TGGTGAGAAGCAGGTACAAC 57.456 50.000 0.00 0.00 0.00 3.32
4843 9410 3.788227 AATGGTGAGAAGCAGGTACAA 57.212 42.857 0.00 0.00 0.00 2.41
4844 9411 4.093743 TCTAATGGTGAGAAGCAGGTACA 58.906 43.478 0.00 0.00 0.00 2.90
4845 9412 4.737855 TCTAATGGTGAGAAGCAGGTAC 57.262 45.455 0.00 0.00 0.00 3.34
4846 9413 5.248477 AGTTTCTAATGGTGAGAAGCAGGTA 59.752 40.000 2.75 0.00 36.81 3.08
4847 9414 4.042187 AGTTTCTAATGGTGAGAAGCAGGT 59.958 41.667 2.75 0.00 36.81 4.00
4848 9415 4.583871 AGTTTCTAATGGTGAGAAGCAGG 58.416 43.478 2.75 0.00 36.81 4.85
4849 9416 5.702670 TCAAGTTTCTAATGGTGAGAAGCAG 59.297 40.000 2.75 0.00 36.81 4.24
4850 9417 5.470098 GTCAAGTTTCTAATGGTGAGAAGCA 59.530 40.000 2.75 0.00 36.81 3.91
4884 9451 3.444388 ACCCTGCAAAGTTCGTTAACAAA 59.556 39.130 6.39 0.00 38.12 2.83
4891 9458 2.159382 CCATTACCCTGCAAAGTTCGT 58.841 47.619 0.00 0.00 0.00 3.85
4900 9467 3.350219 TGAGAAACTCCATTACCCTGC 57.650 47.619 0.00 0.00 0.00 4.85
4906 9473 6.310941 TGACCCATTTTGAGAAACTCCATTA 58.689 36.000 0.00 0.00 0.00 1.90
4908 9475 4.739793 TGACCCATTTTGAGAAACTCCAT 58.260 39.130 0.00 0.00 0.00 3.41
4912 9479 4.218312 AGCTTGACCCATTTTGAGAAACT 58.782 39.130 0.00 0.00 0.00 2.66
4913 9480 4.590850 AGCTTGACCCATTTTGAGAAAC 57.409 40.909 0.00 0.00 0.00 2.78
4916 9483 4.836825 CTCTAGCTTGACCCATTTTGAGA 58.163 43.478 0.00 0.00 0.00 3.27
4920 9487 3.439857 TGCTCTAGCTTGACCCATTTT 57.560 42.857 3.26 0.00 42.66 1.82
4944 9511 9.166173 GTATACCATAAATCAAGCTGCATCATA 57.834 33.333 1.02 0.00 0.00 2.15
4972 9539 5.411361 TGAAATGAAACGTGGAATGACTAGG 59.589 40.000 0.00 0.00 0.00 3.02
4973 9540 6.147821 AGTGAAATGAAACGTGGAATGACTAG 59.852 38.462 0.00 0.00 0.00 2.57
4974 9541 5.995282 AGTGAAATGAAACGTGGAATGACTA 59.005 36.000 0.00 0.00 0.00 2.59
4975 9542 4.821805 AGTGAAATGAAACGTGGAATGACT 59.178 37.500 0.00 0.00 0.00 3.41
4977 9544 4.578516 ACAGTGAAATGAAACGTGGAATGA 59.421 37.500 0.00 0.00 0.00 2.57
4978 9545 4.858935 ACAGTGAAATGAAACGTGGAATG 58.141 39.130 0.00 0.00 0.00 2.67
4979 9546 6.206634 ACATACAGTGAAATGAAACGTGGAAT 59.793 34.615 14.43 0.00 0.00 3.01
4980 9547 5.529430 ACATACAGTGAAATGAAACGTGGAA 59.471 36.000 14.43 0.00 0.00 3.53
4981 9548 5.060506 ACATACAGTGAAATGAAACGTGGA 58.939 37.500 14.43 0.00 0.00 4.02
4982 9549 5.356882 ACATACAGTGAAATGAAACGTGG 57.643 39.130 14.43 0.00 0.00 4.94
4997 9564 8.993121 ACACTAATTTCTTTCTCACACATACAG 58.007 33.333 0.00 0.00 0.00 2.74
4998 9565 8.902540 ACACTAATTTCTTTCTCACACATACA 57.097 30.769 0.00 0.00 0.00 2.29
5001 9568 8.450578 TCAACACTAATTTCTTTCTCACACAT 57.549 30.769 0.00 0.00 0.00 3.21
5002 9569 7.857734 TCAACACTAATTTCTTTCTCACACA 57.142 32.000 0.00 0.00 0.00 3.72
5003 9570 9.387123 GAATCAACACTAATTTCTTTCTCACAC 57.613 33.333 0.00 0.00 0.00 3.82
5015 9582 9.851686 TGCTCCTAATATGAATCAACACTAATT 57.148 29.630 0.00 0.00 0.00 1.40
5017 9584 9.851686 AATGCTCCTAATATGAATCAACACTAA 57.148 29.630 0.00 0.00 0.00 2.24
5018 9585 9.851686 AAATGCTCCTAATATGAATCAACACTA 57.148 29.630 0.00 0.00 0.00 2.74
5019 9586 8.757982 AAATGCTCCTAATATGAATCAACACT 57.242 30.769 0.00 0.00 0.00 3.55
5020 9587 9.807649 AAAAATGCTCCTAATATGAATCAACAC 57.192 29.630 0.00 0.00 0.00 3.32
5031 9598 9.874205 CCTGAAATTTGAAAAATGCTCCTAATA 57.126 29.630 0.00 0.00 0.00 0.98
5032 9599 8.377799 ACCTGAAATTTGAAAAATGCTCCTAAT 58.622 29.630 0.00 0.00 0.00 1.73
5034 9601 7.301868 ACCTGAAATTTGAAAAATGCTCCTA 57.698 32.000 0.00 0.00 0.00 2.94
5036 9603 8.037166 AGATACCTGAAATTTGAAAAATGCTCC 58.963 33.333 0.00 0.00 0.00 4.70
5037 9604 8.992835 AGATACCTGAAATTTGAAAAATGCTC 57.007 30.769 0.00 0.00 0.00 4.26
5038 9605 9.211485 CAAGATACCTGAAATTTGAAAAATGCT 57.789 29.630 0.00 0.00 0.00 3.79
5039 9606 9.206870 TCAAGATACCTGAAATTTGAAAAATGC 57.793 29.630 0.00 0.00 0.00 3.56
5043 9610 9.912634 GATGTCAAGATACCTGAAATTTGAAAA 57.087 29.630 0.00 0.00 0.00 2.29
5044 9611 9.300681 AGATGTCAAGATACCTGAAATTTGAAA 57.699 29.630 0.00 0.00 0.00 2.69
5045 9612 8.868522 AGATGTCAAGATACCTGAAATTTGAA 57.131 30.769 0.00 0.00 0.00 2.69
5047 9614 8.331022 CGTAGATGTCAAGATACCTGAAATTTG 58.669 37.037 0.00 0.00 0.00 2.32
5049 9616 7.782049 TCGTAGATGTCAAGATACCTGAAATT 58.218 34.615 0.00 0.00 0.00 1.82
5050 9617 7.348080 TCGTAGATGTCAAGATACCTGAAAT 57.652 36.000 0.00 0.00 0.00 2.17
5051 9618 6.680625 GCTCGTAGATGTCAAGATACCTGAAA 60.681 42.308 0.00 0.00 33.89 2.69
5052 9619 5.221067 GCTCGTAGATGTCAAGATACCTGAA 60.221 44.000 0.00 0.00 33.89 3.02
5053 9620 4.276183 GCTCGTAGATGTCAAGATACCTGA 59.724 45.833 0.00 0.00 33.89 3.86
5054 9621 4.541779 GCTCGTAGATGTCAAGATACCTG 58.458 47.826 0.00 0.00 33.89 4.00
5055 9622 3.570550 GGCTCGTAGATGTCAAGATACCT 59.429 47.826 0.00 0.00 33.89 3.08
5056 9623 3.570550 AGGCTCGTAGATGTCAAGATACC 59.429 47.826 0.00 0.00 33.89 2.73
5057 9624 4.517453 AGAGGCTCGTAGATGTCAAGATAC 59.483 45.833 9.22 0.00 33.89 2.24
5058 9625 4.517075 CAGAGGCTCGTAGATGTCAAGATA 59.483 45.833 9.22 0.00 33.89 1.98
5060 9627 2.685388 CAGAGGCTCGTAGATGTCAAGA 59.315 50.000 9.22 0.00 33.89 3.02
5061 9628 2.797792 GCAGAGGCTCGTAGATGTCAAG 60.798 54.545 9.22 0.00 36.96 3.02
5062 9629 1.135139 GCAGAGGCTCGTAGATGTCAA 59.865 52.381 9.22 0.00 36.96 3.18
5063 9630 0.741326 GCAGAGGCTCGTAGATGTCA 59.259 55.000 9.22 0.00 36.96 3.58
5064 9631 3.560826 GCAGAGGCTCGTAGATGTC 57.439 57.895 9.22 0.00 36.96 3.06
5076 9643 1.845627 TTCCCCTTCTGCAGCAGAGG 61.846 60.000 24.42 24.42 41.75 3.69
5077 9644 0.037303 TTTCCCCTTCTGCAGCAGAG 59.963 55.000 24.15 17.52 41.75 3.35
5078 9645 0.478072 TTTTCCCCTTCTGCAGCAGA 59.522 50.000 21.85 21.85 38.87 4.26
5079 9646 1.000171 GTTTTTCCCCTTCTGCAGCAG 60.000 52.381 17.10 17.10 0.00 4.24
5080 9647 1.039856 GTTTTTCCCCTTCTGCAGCA 58.960 50.000 9.47 0.00 0.00 4.41
5121 9688 5.471456 CCTCATACCATTCAGTATCCTTTGC 59.529 44.000 0.00 0.00 30.38 3.68
5123 9690 6.386927 TCACCTCATACCATTCAGTATCCTTT 59.613 38.462 0.00 0.00 30.38 3.11
5140 9707 1.347707 TGGCTTCGAACTTCACCTCAT 59.652 47.619 0.00 0.00 0.00 2.90
5141 9708 0.756294 TGGCTTCGAACTTCACCTCA 59.244 50.000 0.00 0.00 0.00 3.86
5153 9720 1.520342 GCTAGCTCCTGTGGCTTCG 60.520 63.158 7.70 0.00 40.74 3.79
5166 9733 3.958147 TTGTGGAGGCAGCGCTAGC 62.958 63.158 10.99 16.51 45.58 3.42
5168 9735 2.047274 GTTGTGGAGGCAGCGCTA 60.047 61.111 10.99 0.00 0.00 4.26
5170 9737 3.426568 GAGTTGTGGAGGCAGCGC 61.427 66.667 0.00 0.00 0.00 5.92
5198 9789 3.643320 AGTGGTCTCAGTTCAGACATCAA 59.357 43.478 3.17 0.00 44.18 2.57
5202 9793 2.666317 TGAGTGGTCTCAGTTCAGACA 58.334 47.619 3.17 0.00 44.58 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.