Multiple sequence alignment - TraesCS7A01G034300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G034300 chr7A 100.000 2816 0 0 1 2816 15004766 15007581 0.000000e+00 5201.0
1 TraesCS7A01G034300 chr7A 90.618 469 40 3 1 465 519175049 519174581 1.110000e-173 619.0
2 TraesCS7A01G034300 chr7A 89.552 268 24 4 2331 2595 718287775 718287509 1.250000e-88 337.0
3 TraesCS7A01G034300 chr7D 92.312 1847 114 14 775 2606 16153683 16155516 0.000000e+00 2599.0
4 TraesCS7A01G034300 chr7D 84.953 844 77 18 1226 2068 16199347 16200141 0.000000e+00 809.0
5 TraesCS7A01G034300 chr7D 88.933 506 39 4 1440 1944 16161583 16162072 2.400000e-170 608.0
6 TraesCS7A01G034300 chr7D 79.106 828 137 25 1014 1825 16170627 16171434 3.190000e-149 538.0
7 TraesCS7A01G034300 chr7D 78.981 785 124 23 1065 1824 26494246 26495014 5.420000e-137 497.0
8 TraesCS7A01G034300 chr7D 90.741 324 21 6 2361 2680 16185337 16185655 9.330000e-115 424.0
9 TraesCS7A01G034300 chr3D 91.635 1829 127 17 859 2680 584699633 584697824 0.000000e+00 2507.0
10 TraesCS7A01G034300 chr3D 84.597 844 80 18 1226 2068 584689096 584688302 0.000000e+00 793.0
11 TraesCS7A01G034300 chr3D 93.617 94 5 1 2674 2767 362238281 362238373 3.780000e-29 139.0
12 TraesCS7A01G034300 chr3D 89.423 104 9 2 2683 2784 424006071 424005968 2.280000e-26 130.0
13 TraesCS7A01G034300 chr3D 96.875 64 2 0 514 577 584699973 584699910 1.070000e-19 108.0
14 TraesCS7A01G034300 chr4A 91.988 1036 66 7 798 1819 718607918 718606886 0.000000e+00 1437.0
15 TraesCS7A01G034300 chr4A 93.798 516 28 1 847 1358 718848683 718849198 0.000000e+00 773.0
16 TraesCS7A01G034300 chr4A 86.519 675 54 14 1399 2072 718849802 718850440 0.000000e+00 708.0
17 TraesCS7A01G034300 chr4A 91.507 471 35 4 1 467 640611739 640612208 0.000000e+00 643.0
18 TraesCS7A01G034300 chr4A 88.571 280 28 4 2328 2605 674616793 674617070 1.250000e-88 337.0
19 TraesCS7A01G034300 chr4A 82.262 389 53 13 1860 2240 718606592 718606212 3.500000e-84 322.0
20 TraesCS7A01G034300 chr4A 88.477 243 27 1 513 755 718613397 718613156 2.740000e-75 292.0
21 TraesCS7A01G034300 chr4A 88.950 181 19 1 513 693 718614415 718614236 3.650000e-54 222.0
22 TraesCS7A01G034300 chr4A 81.098 164 13 3 1776 1939 718605880 718605735 6.370000e-22 115.0
23 TraesCS7A01G034300 chr4A 94.444 54 1 1 1353 1406 718849371 718849422 6.470000e-12 82.4
24 TraesCS7A01G034300 chr2A 91.863 467 35 2 1 465 75900421 75900886 0.000000e+00 649.0
25 TraesCS7A01G034300 chr2A 90.812 468 40 2 1 465 619274828 619274361 8.570000e-175 623.0
26 TraesCS7A01G034300 chr6A 91.684 469 34 4 1 465 116896555 116896088 0.000000e+00 645.0
27 TraesCS7A01G034300 chr6A 91.837 98 7 1 2670 2767 169203407 169203311 4.890000e-28 135.0
28 TraesCS7A01G034300 chr3A 90.832 469 39 3 1 465 747097511 747097979 2.380000e-175 625.0
29 TraesCS7A01G034300 chr3A 90.832 469 39 3 1 465 747137622 747138090 2.380000e-175 625.0
30 TraesCS7A01G034300 chr3A 90.832 469 39 3 1 465 747165361 747165829 2.380000e-175 625.0
31 TraesCS7A01G034300 chr3A 90.638 470 39 4 1 465 744569646 744570115 1.110000e-173 619.0
32 TraesCS7A01G034300 chr3A 86.139 101 9 2 2582 2677 715823892 715823792 1.380000e-18 104.0
33 TraesCS7A01G034300 chr4D 90.074 272 24 3 2323 2592 336538926 336538656 1.610000e-92 350.0
34 TraesCS7A01G034300 chr4D 90.805 261 20 4 2331 2589 363683712 363683970 2.080000e-91 346.0
35 TraesCS7A01G034300 chr4D 88.496 113 8 4 2680 2790 485409348 485409457 6.330000e-27 132.0
36 TraesCS7A01G034300 chr4D 86.139 101 9 3 2582 2677 499688630 499688730 1.380000e-18 104.0
37 TraesCS7A01G034300 chr4B 90.421 261 22 3 2331 2589 22857615 22857356 9.660000e-90 340.0
38 TraesCS7A01G034300 chr2D 83.514 370 47 13 2318 2677 14985372 14985007 1.620000e-87 333.0
39 TraesCS7A01G034300 chr1D 81.043 211 32 5 1131 1340 262341601 262341804 8.070000e-36 161.0
40 TraesCS7A01G034300 chr1D 93.684 95 6 0 2673 2767 251295262 251295168 2.920000e-30 143.0
41 TraesCS7A01G034300 chr1D 88.785 107 10 2 2677 2782 127266904 127266799 2.280000e-26 130.0
42 TraesCS7A01G034300 chr1B 78.077 260 43 12 1091 1346 349349402 349349153 4.860000e-33 152.0
43 TraesCS7A01G034300 chr1B 91.837 98 6 2 2677 2772 33839314 33839411 4.890000e-28 135.0
44 TraesCS7A01G034300 chr1A 89.189 111 12 0 1132 1242 337629695 337629585 3.780000e-29 139.0
45 TraesCS7A01G034300 chr1A 91.753 97 8 0 2673 2769 511621794 511621890 4.890000e-28 135.0
46 TraesCS7A01G034300 chr5A 90.099 101 10 0 2669 2769 635402490 635402590 6.330000e-27 132.0
47 TraesCS7A01G034300 chr5B 88.119 101 5 6 2584 2677 392040112 392040012 2.290000e-21 113.0
48 TraesCS7A01G034300 chr5D 87.000 100 8 4 2583 2677 10067034 10067133 1.070000e-19 108.0
49 TraesCS7A01G034300 chr5D 86.000 100 10 2 2582 2677 327481727 327481628 1.380000e-18 104.0
50 TraesCS7A01G034300 chr6B 85.577 104 11 2 2578 2677 454767788 454767891 3.840000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G034300 chr7A 15004766 15007581 2815 False 5201.000000 5201 100.0000 1 2816 1 chr7A.!!$F1 2815
1 TraesCS7A01G034300 chr7D 16153683 16155516 1833 False 2599.000000 2599 92.3120 775 2606 1 chr7D.!!$F1 1831
2 TraesCS7A01G034300 chr7D 16199347 16200141 794 False 809.000000 809 84.9530 1226 2068 1 chr7D.!!$F5 842
3 TraesCS7A01G034300 chr7D 16170627 16171434 807 False 538.000000 538 79.1060 1014 1825 1 chr7D.!!$F3 811
4 TraesCS7A01G034300 chr7D 26494246 26495014 768 False 497.000000 497 78.9810 1065 1824 1 chr7D.!!$F6 759
5 TraesCS7A01G034300 chr3D 584697824 584699973 2149 True 1307.500000 2507 94.2550 514 2680 2 chr3D.!!$R3 2166
6 TraesCS7A01G034300 chr3D 584688302 584689096 794 True 793.000000 793 84.5970 1226 2068 1 chr3D.!!$R2 842
7 TraesCS7A01G034300 chr4A 718605735 718607918 2183 True 624.666667 1437 85.1160 798 2240 3 chr4A.!!$R1 1442
8 TraesCS7A01G034300 chr4A 718848683 718850440 1757 False 521.133333 773 91.5870 847 2072 3 chr4A.!!$F3 1225
9 TraesCS7A01G034300 chr4A 718613156 718614415 1259 True 257.000000 292 88.7135 513 755 2 chr4A.!!$R2 242

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
622 1641 0.035458 AGGAGCCAACTACACTGCAC 59.965 55.0 0.0 0.0 0.0 4.57 F
796 1826 0.040058 TAGAAGGTGCGGTAGGTGGA 59.960 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1457 3100 0.040942 AGCTCTCTCCTCCTGCTTCA 59.959 55.0 0.0 0.0 0.0 3.02 R
2751 4714 0.113776 AGTGTACTCCCTCCGTCCAA 59.886 55.0 0.0 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.720649 TCATTAACAAGCTAGCTCGACT 57.279 40.909 19.65 5.77 0.00 4.18
22 23 4.673441 TCATTAACAAGCTAGCTCGACTC 58.327 43.478 19.65 0.00 0.00 3.36
23 24 2.826979 TAACAAGCTAGCTCGACTCG 57.173 50.000 19.65 5.28 0.00 4.18
24 25 1.166129 AACAAGCTAGCTCGACTCGA 58.834 50.000 19.65 0.29 0.00 4.04
25 26 0.448593 ACAAGCTAGCTCGACTCGAC 59.551 55.000 19.65 0.00 0.00 4.20
26 27 0.730265 CAAGCTAGCTCGACTCGACT 59.270 55.000 19.65 0.00 0.00 4.18
27 28 1.011333 AAGCTAGCTCGACTCGACTC 58.989 55.000 19.65 0.00 0.00 3.36
28 29 1.149361 AGCTAGCTCGACTCGACTCG 61.149 60.000 12.68 8.00 34.83 4.18
29 30 1.422950 GCTAGCTCGACTCGACTCGT 61.423 60.000 7.70 0.00 35.10 4.18
30 31 1.000884 CTAGCTCGACTCGACTCGTT 58.999 55.000 13.05 4.85 35.10 3.85
31 32 2.191802 CTAGCTCGACTCGACTCGTTA 58.808 52.381 13.05 5.57 35.10 3.18
32 33 0.720590 AGCTCGACTCGACTCGTTAC 59.279 55.000 13.05 5.54 35.10 2.50
33 34 0.720590 GCTCGACTCGACTCGTTACT 59.279 55.000 13.05 0.00 35.10 2.24
34 35 1.923204 GCTCGACTCGACTCGTTACTA 59.077 52.381 13.05 0.00 35.10 1.82
35 36 2.539274 GCTCGACTCGACTCGTTACTAT 59.461 50.000 13.05 0.00 35.10 2.12
36 37 3.733224 GCTCGACTCGACTCGTTACTATA 59.267 47.826 13.05 0.00 35.10 1.31
37 38 4.208047 GCTCGACTCGACTCGTTACTATAA 59.792 45.833 13.05 0.00 35.10 0.98
38 39 5.627802 TCGACTCGACTCGTTACTATAAC 57.372 43.478 13.05 0.00 35.10 1.89
39 40 4.205181 TCGACTCGACTCGTTACTATAACG 59.795 45.833 13.56 13.56 44.29 3.18
51 52 7.706159 TCGTTACTATAACGAGCTTAAATCCA 58.294 34.615 17.37 0.00 46.21 3.41
52 53 8.190122 TCGTTACTATAACGAGCTTAAATCCAA 58.810 33.333 17.37 0.00 46.21 3.53
53 54 8.477709 CGTTACTATAACGAGCTTAAATCCAAG 58.522 37.037 14.37 0.00 45.64 3.61
54 55 9.525409 GTTACTATAACGAGCTTAAATCCAAGA 57.475 33.333 0.00 0.00 0.00 3.02
57 58 9.046296 ACTATAACGAGCTTAAATCCAAGATTG 57.954 33.333 0.00 0.00 32.61 2.67
67 68 2.670635 CCAAGATTGGCTCGACTCG 58.329 57.895 0.00 0.00 42.21 4.18
68 69 0.108615 CCAAGATTGGCTCGACTCGT 60.109 55.000 0.00 0.00 42.21 4.18
69 70 1.134367 CCAAGATTGGCTCGACTCGTA 59.866 52.381 0.00 0.00 42.21 3.43
70 71 2.223829 CCAAGATTGGCTCGACTCGTAT 60.224 50.000 0.00 0.00 42.21 3.06
71 72 3.004419 CCAAGATTGGCTCGACTCGTATA 59.996 47.826 0.00 0.00 42.21 1.47
72 73 4.499188 CCAAGATTGGCTCGACTCGTATAA 60.499 45.833 0.00 0.00 42.21 0.98
73 74 4.226113 AGATTGGCTCGACTCGTATAAC 57.774 45.455 0.00 0.00 0.00 1.89
74 75 3.884091 AGATTGGCTCGACTCGTATAACT 59.116 43.478 0.00 0.00 0.00 2.24
75 76 3.687572 TTGGCTCGACTCGTATAACTC 57.312 47.619 0.00 0.00 0.00 3.01
76 77 1.596260 TGGCTCGACTCGTATAACTCG 59.404 52.381 0.00 0.00 0.00 4.18
77 78 1.596727 GGCTCGACTCGTATAACTCGT 59.403 52.381 0.00 0.00 0.00 4.18
78 79 2.599377 GGCTCGACTCGTATAACTCGTG 60.599 54.545 0.00 0.00 0.00 4.35
79 80 2.283617 GCTCGACTCGTATAACTCGTGA 59.716 50.000 0.00 0.00 0.00 4.35
80 81 3.602038 GCTCGACTCGTATAACTCGTGAG 60.602 52.174 0.00 0.00 0.00 3.51
81 82 2.283617 TCGACTCGTATAACTCGTGAGC 59.716 50.000 0.00 0.00 0.00 4.26
82 83 2.284684 CGACTCGTATAACTCGTGAGCT 59.715 50.000 0.00 0.00 0.00 4.09
83 84 3.609475 GACTCGTATAACTCGTGAGCTG 58.391 50.000 0.00 0.00 0.00 4.24
84 85 2.355132 ACTCGTATAACTCGTGAGCTGG 59.645 50.000 0.00 0.00 0.00 4.85
85 86 1.065102 TCGTATAACTCGTGAGCTGGC 59.935 52.381 0.00 0.00 0.00 4.85
86 87 1.065701 CGTATAACTCGTGAGCTGGCT 59.934 52.381 0.00 0.00 0.00 4.75
87 88 2.733517 GTATAACTCGTGAGCTGGCTC 58.266 52.381 14.86 14.86 43.01 4.70
88 89 0.101399 ATAACTCGTGAGCTGGCTCG 59.899 55.000 16.33 7.57 45.48 5.03
89 90 1.241990 TAACTCGTGAGCTGGCTCGT 61.242 55.000 16.33 6.57 45.48 4.18
90 91 2.088674 AACTCGTGAGCTGGCTCGTT 62.089 55.000 16.33 11.51 45.48 3.85
91 92 1.373497 CTCGTGAGCTGGCTCGTTT 60.373 57.895 16.33 0.00 45.48 3.60
92 93 0.109272 CTCGTGAGCTGGCTCGTTTA 60.109 55.000 16.33 0.00 45.48 2.01
93 94 0.109272 TCGTGAGCTGGCTCGTTTAG 60.109 55.000 16.33 7.04 45.48 1.85
107 108 5.283060 CTCGTTTAGCATGTTAAGCTTGT 57.717 39.130 9.86 0.00 43.25 3.16
108 109 5.682943 TCGTTTAGCATGTTAAGCTTGTT 57.317 34.783 9.86 0.00 43.25 2.83
109 110 6.788684 TCGTTTAGCATGTTAAGCTTGTTA 57.211 33.333 9.86 0.00 43.25 2.41
110 111 7.192148 TCGTTTAGCATGTTAAGCTTGTTAA 57.808 32.000 9.86 0.00 43.25 2.01
111 112 7.640852 TCGTTTAGCATGTTAAGCTTGTTAAA 58.359 30.769 9.86 4.81 43.25 1.52
112 113 7.801315 TCGTTTAGCATGTTAAGCTTGTTAAAG 59.199 33.333 9.86 2.94 43.25 1.85
113 114 7.801315 CGTTTAGCATGTTAAGCTTGTTAAAGA 59.199 33.333 9.86 0.00 43.25 2.52
114 115 9.626045 GTTTAGCATGTTAAGCTTGTTAAAGAT 57.374 29.630 9.86 0.00 43.25 2.40
118 119 9.177608 AGCATGTTAAGCTTGTTAAAGATATGA 57.822 29.630 9.86 0.00 39.87 2.15
119 120 9.787532 GCATGTTAAGCTTGTTAAAGATATGAA 57.212 29.630 9.86 0.00 35.19 2.57
128 129 9.937175 GCTTGTTAAAGATATGAACATTAGACC 57.063 33.333 0.00 0.00 35.19 3.85
141 142 9.832445 ATGAACATTAGACCTTACAAATACGAT 57.168 29.630 0.00 0.00 0.00 3.73
177 178 9.618890 AACTGAGAATTTAGTATGTGCATATGT 57.381 29.630 6.16 0.00 0.00 2.29
178 179 9.049523 ACTGAGAATTTAGTATGTGCATATGTG 57.950 33.333 6.16 0.00 0.00 3.21
179 180 8.382030 TGAGAATTTAGTATGTGCATATGTGG 57.618 34.615 6.16 0.00 0.00 4.17
180 181 7.992608 TGAGAATTTAGTATGTGCATATGTGGT 59.007 33.333 6.16 0.00 0.00 4.16
181 182 8.383318 AGAATTTAGTATGTGCATATGTGGTC 57.617 34.615 6.16 0.00 0.00 4.02
182 183 7.992608 AGAATTTAGTATGTGCATATGTGGTCA 59.007 33.333 6.16 0.00 0.00 4.02
183 184 8.696043 AATTTAGTATGTGCATATGTGGTCAT 57.304 30.769 6.16 6.88 38.00 3.06
184 185 7.495135 TTTAGTATGTGCATATGTGGTCATG 57.505 36.000 6.16 0.00 35.70 3.07
185 186 5.039920 AGTATGTGCATATGTGGTCATGT 57.960 39.130 6.16 0.00 35.70 3.21
186 187 6.173427 AGTATGTGCATATGTGGTCATGTA 57.827 37.500 6.16 0.00 35.70 2.29
187 188 5.991606 AGTATGTGCATATGTGGTCATGTAC 59.008 40.000 6.16 0.00 38.00 2.90
188 189 3.194062 TGTGCATATGTGGTCATGTACG 58.806 45.455 4.29 0.00 39.68 3.67
189 190 3.194861 GTGCATATGTGGTCATGTACGT 58.805 45.455 4.29 0.00 35.70 3.57
190 191 3.001228 GTGCATATGTGGTCATGTACGTG 59.999 47.826 8.90 8.90 35.70 4.49
191 192 3.194861 GCATATGTGGTCATGTACGTGT 58.805 45.455 14.63 0.00 35.70 4.49
192 193 3.001228 GCATATGTGGTCATGTACGTGTG 59.999 47.826 14.63 4.58 35.70 3.82
193 194 4.429108 CATATGTGGTCATGTACGTGTGA 58.571 43.478 14.63 3.34 35.70 3.58
194 195 2.432206 TGTGGTCATGTACGTGTGAG 57.568 50.000 14.63 0.00 0.00 3.51
195 196 1.684450 TGTGGTCATGTACGTGTGAGT 59.316 47.619 14.63 0.00 0.00 3.41
196 197 2.287970 TGTGGTCATGTACGTGTGAGTC 60.288 50.000 14.63 4.55 0.00 3.36
197 198 2.030185 GTGGTCATGTACGTGTGAGTCT 60.030 50.000 14.63 0.00 0.00 3.24
198 199 2.228103 TGGTCATGTACGTGTGAGTCTC 59.772 50.000 14.63 0.00 0.00 3.36
199 200 2.488545 GGTCATGTACGTGTGAGTCTCT 59.511 50.000 14.63 0.00 0.00 3.10
200 201 3.057456 GGTCATGTACGTGTGAGTCTCTT 60.057 47.826 14.63 0.00 0.00 2.85
201 202 3.914966 GTCATGTACGTGTGAGTCTCTTG 59.085 47.826 14.63 0.00 0.00 3.02
202 203 3.057526 TCATGTACGTGTGAGTCTCTTGG 60.058 47.826 14.63 0.00 0.00 3.61
203 204 1.611977 TGTACGTGTGAGTCTCTTGGG 59.388 52.381 0.00 0.00 0.00 4.12
204 205 1.612463 GTACGTGTGAGTCTCTTGGGT 59.388 52.381 0.00 0.00 0.00 4.51
205 206 0.389391 ACGTGTGAGTCTCTTGGGTG 59.611 55.000 0.65 0.00 0.00 4.61
206 207 0.673985 CGTGTGAGTCTCTTGGGTGA 59.326 55.000 0.65 0.00 0.00 4.02
207 208 1.603172 CGTGTGAGTCTCTTGGGTGAC 60.603 57.143 0.65 0.00 36.54 3.67
208 209 1.689273 GTGTGAGTCTCTTGGGTGACT 59.311 52.381 0.65 0.00 45.37 3.41
211 212 0.528470 GAGTCTCTTGGGTGACTCGG 59.472 60.000 10.85 0.00 46.17 4.63
212 213 1.079750 GTCTCTTGGGTGACTCGGC 60.080 63.158 0.00 0.00 34.34 5.54
213 214 2.266055 CTCTTGGGTGACTCGGCC 59.734 66.667 0.00 0.00 0.00 6.13
214 215 3.649277 CTCTTGGGTGACTCGGCCG 62.649 68.421 22.12 22.12 0.00 6.13
215 216 3.691342 CTTGGGTGACTCGGCCGA 61.691 66.667 29.03 29.03 0.00 5.54
216 217 3.649277 CTTGGGTGACTCGGCCGAG 62.649 68.421 45.26 45.26 46.91 4.63
237 238 3.970410 CTGGGCCTTGTGCTGGGA 61.970 66.667 4.53 0.00 40.92 4.37
238 239 4.284550 TGGGCCTTGTGCTGGGAC 62.285 66.667 4.53 0.00 40.92 4.46
239 240 4.284550 GGGCCTTGTGCTGGGACA 62.285 66.667 0.84 0.00 40.92 4.02
240 241 2.985847 GGCCTTGTGCTGGGACAC 60.986 66.667 0.00 0.00 40.92 3.67
246 247 3.749981 GTGCTGGGACACAAGGTG 58.250 61.111 0.00 0.00 40.40 4.00
263 264 9.734984 ACACAAGGTGTTTAGTAGCTATATTTT 57.265 29.630 0.00 0.00 45.08 1.82
309 310 6.452244 TTTTTACCGAGCTTAACGAGTTAC 57.548 37.500 0.00 0.00 0.00 2.50
310 311 2.643933 ACCGAGCTTAACGAGTTACC 57.356 50.000 0.00 0.00 0.00 2.85
311 312 1.203287 ACCGAGCTTAACGAGTTACCC 59.797 52.381 0.00 0.00 0.00 3.69
312 313 1.542544 CGAGCTTAACGAGTTACCCG 58.457 55.000 0.00 0.00 0.00 5.28
313 314 1.131126 CGAGCTTAACGAGTTACCCGA 59.869 52.381 0.00 0.00 0.00 5.14
314 315 2.790468 CGAGCTTAACGAGTTACCCGAG 60.790 54.545 0.00 0.00 0.00 4.63
315 316 2.163211 GAGCTTAACGAGTTACCCGAGT 59.837 50.000 0.00 0.00 0.00 4.18
316 317 3.347216 AGCTTAACGAGTTACCCGAGTA 58.653 45.455 0.00 0.00 0.00 2.59
317 318 3.127721 AGCTTAACGAGTTACCCGAGTAC 59.872 47.826 0.00 0.00 0.00 2.73
318 319 3.127721 GCTTAACGAGTTACCCGAGTACT 59.872 47.826 0.00 0.00 0.00 2.73
319 320 4.729170 GCTTAACGAGTTACCCGAGTACTC 60.729 50.000 13.18 13.18 0.00 2.59
320 321 2.479566 ACGAGTTACCCGAGTACTCA 57.520 50.000 22.37 0.00 31.49 3.41
321 322 2.996631 ACGAGTTACCCGAGTACTCAT 58.003 47.619 22.37 9.73 31.49 2.90
322 323 2.681848 ACGAGTTACCCGAGTACTCATG 59.318 50.000 22.37 14.27 31.49 3.07
323 324 2.941064 CGAGTTACCCGAGTACTCATGA 59.059 50.000 22.37 0.00 31.49 3.07
324 325 3.002451 CGAGTTACCCGAGTACTCATGAG 59.998 52.174 21.37 21.37 31.49 2.90
325 326 4.197750 GAGTTACCCGAGTACTCATGAGA 58.802 47.826 29.27 10.06 31.94 3.27
326 327 4.794334 AGTTACCCGAGTACTCATGAGAT 58.206 43.478 29.27 15.19 0.00 2.75
327 328 4.822896 AGTTACCCGAGTACTCATGAGATC 59.177 45.833 29.27 20.03 0.00 2.75
328 329 3.298686 ACCCGAGTACTCATGAGATCA 57.701 47.619 29.27 10.69 0.00 2.92
329 330 3.218453 ACCCGAGTACTCATGAGATCAG 58.782 50.000 29.27 17.22 0.00 2.90
330 331 2.030363 CCCGAGTACTCATGAGATCAGC 60.030 54.545 29.27 12.84 0.00 4.26
331 332 2.884012 CCGAGTACTCATGAGATCAGCT 59.116 50.000 29.27 16.87 0.00 4.24
332 333 3.058293 CCGAGTACTCATGAGATCAGCTC 60.058 52.174 29.27 21.91 44.21 4.09
343 344 4.849111 GAGATCAGCTCGTTTAACTTGG 57.151 45.455 0.00 0.00 33.17 3.61
344 345 4.246458 GAGATCAGCTCGTTTAACTTGGT 58.754 43.478 0.00 0.00 33.17 3.67
345 346 3.997021 AGATCAGCTCGTTTAACTTGGTG 59.003 43.478 0.00 9.02 0.00 4.17
346 347 3.188159 TCAGCTCGTTTAACTTGGTGT 57.812 42.857 12.89 0.00 0.00 4.16
347 348 2.869801 TCAGCTCGTTTAACTTGGTGTG 59.130 45.455 12.89 0.00 0.00 3.82
348 349 2.612212 CAGCTCGTTTAACTTGGTGTGT 59.388 45.455 7.73 0.00 0.00 3.72
349 350 3.805422 CAGCTCGTTTAACTTGGTGTGTA 59.195 43.478 7.73 0.00 0.00 2.90
350 351 4.271533 CAGCTCGTTTAACTTGGTGTGTAA 59.728 41.667 7.73 0.00 0.00 2.41
351 352 4.877251 AGCTCGTTTAACTTGGTGTGTAAA 59.123 37.500 0.00 0.00 0.00 2.01
352 353 4.965762 GCTCGTTTAACTTGGTGTGTAAAC 59.034 41.667 0.00 0.00 33.71 2.01
353 354 5.447548 GCTCGTTTAACTTGGTGTGTAAACA 60.448 40.000 0.00 0.00 35.01 2.83
354 355 6.492007 TCGTTTAACTTGGTGTGTAAACAA 57.508 33.333 0.00 0.00 35.01 2.83
355 356 7.086230 TCGTTTAACTTGGTGTGTAAACAAT 57.914 32.000 0.00 0.00 35.01 2.71
356 357 7.188157 TCGTTTAACTTGGTGTGTAAACAATC 58.812 34.615 0.00 0.00 35.01 2.67
357 358 7.066043 TCGTTTAACTTGGTGTGTAAACAATCT 59.934 33.333 0.00 0.00 35.01 2.40
358 359 7.698970 CGTTTAACTTGGTGTGTAAACAATCTT 59.301 33.333 0.00 0.00 35.01 2.40
362 363 8.920509 AACTTGGTGTGTAAACAATCTTAAAC 57.079 30.769 0.00 0.00 0.00 2.01
363 364 8.288689 ACTTGGTGTGTAAACAATCTTAAACT 57.711 30.769 0.00 0.00 0.00 2.66
364 365 9.398538 ACTTGGTGTGTAAACAATCTTAAACTA 57.601 29.630 0.00 0.00 0.00 2.24
368 369 9.177304 GGTGTGTAAACAATCTTAAACTAAAGC 57.823 33.333 0.00 0.00 0.00 3.51
369 370 9.946165 GTGTGTAAACAATCTTAAACTAAAGCT 57.054 29.630 0.00 0.00 0.00 3.74
373 374 9.331106 GTAAACAATCTTAAACTAAAGCTCAGC 57.669 33.333 0.00 0.00 0.00 4.26
374 375 7.751768 AACAATCTTAAACTAAAGCTCAGCT 57.248 32.000 0.00 0.00 42.56 4.24
383 384 2.746359 AGCTCAGCTTGGCTCGTT 59.254 55.556 0.00 0.00 36.40 3.85
384 385 1.975327 AGCTCAGCTTGGCTCGTTA 59.025 52.632 0.00 0.00 36.40 3.18
385 386 0.539051 AGCTCAGCTTGGCTCGTTAT 59.461 50.000 0.00 0.00 36.40 1.89
386 387 1.065854 AGCTCAGCTTGGCTCGTTATT 60.066 47.619 0.00 0.00 36.40 1.40
387 388 1.328986 GCTCAGCTTGGCTCGTTATTC 59.671 52.381 0.00 0.00 36.40 1.75
388 389 2.898705 CTCAGCTTGGCTCGTTATTCT 58.101 47.619 0.00 0.00 36.40 2.40
389 390 3.265791 CTCAGCTTGGCTCGTTATTCTT 58.734 45.455 0.00 0.00 36.40 2.52
390 391 3.262420 TCAGCTTGGCTCGTTATTCTTC 58.738 45.455 0.00 0.00 36.40 2.87
391 392 2.029728 CAGCTTGGCTCGTTATTCTTCG 59.970 50.000 0.00 0.00 36.40 3.79
392 393 2.094182 AGCTTGGCTCGTTATTCTTCGA 60.094 45.455 0.00 0.00 30.62 3.71
399 400 4.723691 CTCGTTATTCTTCGAGTTCGTG 57.276 45.455 1.07 0.00 45.37 4.35
400 401 4.151258 TCGTTATTCTTCGAGTTCGTGT 57.849 40.909 1.07 0.00 40.80 4.49
401 402 4.153986 TCGTTATTCTTCGAGTTCGTGTC 58.846 43.478 1.07 0.00 40.80 3.67
402 403 3.003312 CGTTATTCTTCGAGTTCGTGTCG 60.003 47.826 1.07 0.00 40.80 4.35
403 404 2.983402 ATTCTTCGAGTTCGTGTCGA 57.017 45.000 1.07 3.07 44.48 4.20
404 405 2.983402 TTCTTCGAGTTCGTGTCGAT 57.017 45.000 7.21 0.00 45.41 3.59
405 406 2.983402 TCTTCGAGTTCGTGTCGATT 57.017 45.000 7.21 0.00 45.41 3.34
406 407 2.847901 TCTTCGAGTTCGTGTCGATTC 58.152 47.619 7.21 0.00 45.41 2.52
407 408 1.573596 CTTCGAGTTCGTGTCGATTCG 59.426 52.381 15.12 15.12 45.41 3.34
408 409 0.792031 TCGAGTTCGTGTCGATTCGA 59.208 50.000 17.90 17.90 43.89 3.71
409 410 1.172700 CGAGTTCGTGTCGATTCGAG 58.827 55.000 9.42 0.00 41.90 4.04
410 411 1.463693 CGAGTTCGTGTCGATTCGAGT 60.464 52.381 9.42 6.84 41.90 4.18
411 412 2.167591 GAGTTCGTGTCGATTCGAGTC 58.832 52.381 9.42 4.82 36.23 3.36
412 413 1.534163 AGTTCGTGTCGATTCGAGTCA 59.466 47.619 9.42 1.95 36.23 3.41
413 414 2.031420 AGTTCGTGTCGATTCGAGTCAA 60.031 45.455 9.42 0.00 36.23 3.18
414 415 2.242769 TCGTGTCGATTCGAGTCAAG 57.757 50.000 9.42 7.55 36.23 3.02
415 416 1.534163 TCGTGTCGATTCGAGTCAAGT 59.466 47.619 9.42 0.00 36.23 3.16
416 417 1.905687 CGTGTCGATTCGAGTCAAGTC 59.094 52.381 9.42 0.00 36.23 3.01
417 418 2.664698 CGTGTCGATTCGAGTCAAGTCA 60.665 50.000 9.42 0.00 36.23 3.41
418 419 2.657372 GTGTCGATTCGAGTCAAGTCAC 59.343 50.000 9.42 8.32 36.23 3.67
419 420 2.292292 TGTCGATTCGAGTCAAGTCACA 59.708 45.455 9.42 0.00 36.23 3.58
420 421 3.243267 TGTCGATTCGAGTCAAGTCACAA 60.243 43.478 9.42 0.00 36.23 3.33
421 422 3.362237 GTCGATTCGAGTCAAGTCACAAG 59.638 47.826 9.42 0.00 36.23 3.16
422 423 2.091277 CGATTCGAGTCAAGTCACAAGC 59.909 50.000 8.75 0.00 0.00 4.01
423 424 2.890808 TTCGAGTCAAGTCACAAGCT 57.109 45.000 0.00 0.00 0.00 3.74
424 425 4.486090 GATTCGAGTCAAGTCACAAGCTA 58.514 43.478 2.62 0.00 0.00 3.32
425 426 3.284323 TCGAGTCAAGTCACAAGCTAC 57.716 47.619 0.00 0.00 0.00 3.58
426 427 2.885266 TCGAGTCAAGTCACAAGCTACT 59.115 45.455 0.00 0.00 0.00 2.57
427 428 3.058155 TCGAGTCAAGTCACAAGCTACTC 60.058 47.826 0.00 0.00 0.00 2.59
428 429 3.304726 CGAGTCAAGTCACAAGCTACTCA 60.305 47.826 7.93 0.00 33.19 3.41
429 430 4.617067 CGAGTCAAGTCACAAGCTACTCAT 60.617 45.833 7.93 0.00 33.19 2.90
430 431 5.220710 AGTCAAGTCACAAGCTACTCATT 57.779 39.130 0.00 0.00 0.00 2.57
431 432 5.615289 AGTCAAGTCACAAGCTACTCATTT 58.385 37.500 0.00 0.00 0.00 2.32
432 433 6.759272 AGTCAAGTCACAAGCTACTCATTTA 58.241 36.000 0.00 0.00 0.00 1.40
433 434 6.870965 AGTCAAGTCACAAGCTACTCATTTAG 59.129 38.462 0.00 0.00 0.00 1.85
434 435 5.639506 TCAAGTCACAAGCTACTCATTTAGC 59.360 40.000 0.00 0.00 44.27 3.09
440 441 2.121116 GCTACTCATTTAGCTCGCGA 57.879 50.000 9.26 9.26 41.24 5.87
441 442 2.047769 GCTACTCATTTAGCTCGCGAG 58.952 52.381 31.37 31.37 41.24 5.03
442 443 2.541999 GCTACTCATTTAGCTCGCGAGT 60.542 50.000 34.46 23.50 41.24 4.18
443 444 2.656560 ACTCATTTAGCTCGCGAGTT 57.343 45.000 34.46 31.41 33.20 3.01
444 445 2.960819 ACTCATTTAGCTCGCGAGTTT 58.039 42.857 34.46 25.12 33.20 2.66
445 446 2.924290 ACTCATTTAGCTCGCGAGTTTC 59.076 45.455 34.46 19.75 33.20 2.78
446 447 1.917955 TCATTTAGCTCGCGAGTTTCG 59.082 47.619 34.46 19.15 43.89 3.46
447 448 1.917955 CATTTAGCTCGCGAGTTTCGA 59.082 47.619 34.46 18.97 43.74 3.71
453 454 2.924432 CTCGCGAGTTTCGAGTTTTT 57.076 45.000 27.79 0.00 45.86 1.94
472 473 3.963428 TTTTCCAGTCCTACTCTCAGC 57.037 47.619 0.00 0.00 0.00 4.26
473 474 2.604912 TTCCAGTCCTACTCTCAGCA 57.395 50.000 0.00 0.00 0.00 4.41
474 475 2.604912 TCCAGTCCTACTCTCAGCAA 57.395 50.000 0.00 0.00 0.00 3.91
475 476 3.107402 TCCAGTCCTACTCTCAGCAAT 57.893 47.619 0.00 0.00 0.00 3.56
476 477 4.251103 TCCAGTCCTACTCTCAGCAATA 57.749 45.455 0.00 0.00 0.00 1.90
477 478 4.610333 TCCAGTCCTACTCTCAGCAATAA 58.390 43.478 0.00 0.00 0.00 1.40
478 479 5.023452 TCCAGTCCTACTCTCAGCAATAAA 58.977 41.667 0.00 0.00 0.00 1.40
479 480 5.127845 TCCAGTCCTACTCTCAGCAATAAAG 59.872 44.000 0.00 0.00 0.00 1.85
480 481 4.808364 CAGTCCTACTCTCAGCAATAAAGC 59.192 45.833 0.00 0.00 0.00 3.51
482 483 5.188751 AGTCCTACTCTCAGCAATAAAGCTT 59.811 40.000 0.00 0.00 43.70 3.74
483 484 5.522097 GTCCTACTCTCAGCAATAAAGCTTC 59.478 44.000 0.00 0.00 43.70 3.86
484 485 5.423610 TCCTACTCTCAGCAATAAAGCTTCT 59.576 40.000 0.00 0.00 43.70 2.85
485 486 6.607600 TCCTACTCTCAGCAATAAAGCTTCTA 59.392 38.462 0.00 0.00 43.70 2.10
486 487 7.124298 TCCTACTCTCAGCAATAAAGCTTCTAA 59.876 37.037 0.00 0.00 43.70 2.10
487 488 7.437862 CCTACTCTCAGCAATAAAGCTTCTAAG 59.562 40.741 0.00 0.00 43.70 2.18
488 489 6.706295 ACTCTCAGCAATAAAGCTTCTAAGT 58.294 36.000 0.00 0.00 43.70 2.24
489 490 7.841956 ACTCTCAGCAATAAAGCTTCTAAGTA 58.158 34.615 0.00 0.00 43.70 2.24
490 491 8.482128 ACTCTCAGCAATAAAGCTTCTAAGTAT 58.518 33.333 0.00 0.00 43.70 2.12
491 492 9.323985 CTCTCAGCAATAAAGCTTCTAAGTATT 57.676 33.333 0.00 0.00 43.70 1.89
492 493 9.672673 TCTCAGCAATAAAGCTTCTAAGTATTT 57.327 29.630 0.00 0.00 43.70 1.40
495 496 9.846248 CAGCAATAAAGCTTCTAAGTATTTTGT 57.154 29.630 0.00 0.00 43.70 2.83
554 1573 5.674525 ACAACTACATATATGTGCAGCTGT 58.325 37.500 25.48 19.41 41.89 4.40
571 1590 4.329528 CAGCTGTTGCATCTTCTCTCTTAC 59.670 45.833 5.25 0.00 42.74 2.34
591 1610 2.769095 ACCTGCTCTTTGATCCTCTACC 59.231 50.000 0.00 0.00 0.00 3.18
616 1635 0.909610 CCTGGGAGGAGCCAACTACA 60.910 60.000 0.00 0.00 37.67 2.74
617 1636 0.250513 CTGGGAGGAGCCAACTACAC 59.749 60.000 0.00 0.00 38.95 2.90
622 1641 0.035458 AGGAGCCAACTACACTGCAC 59.965 55.000 0.00 0.00 0.00 4.57
623 1642 0.250295 GGAGCCAACTACACTGCACA 60.250 55.000 0.00 0.00 0.00 4.57
627 1646 3.941483 GAGCCAACTACACTGCACAATAT 59.059 43.478 0.00 0.00 0.00 1.28
632 1651 6.260936 GCCAACTACACTGCACAATATCTAAT 59.739 38.462 0.00 0.00 0.00 1.73
659 1678 3.627237 GGGGCCCATCTAGTTGAATTTGA 60.627 47.826 26.86 0.00 0.00 2.69
701 1720 8.560355 TTAGCAAATTTTACATAGAGAGCACA 57.440 30.769 0.00 0.00 0.00 4.57
704 1723 8.616076 AGCAAATTTTACATAGAGAGCACATAC 58.384 33.333 0.00 0.00 0.00 2.39
752 1771 6.595772 TTGTATTTGGCACATTGTTGAAAC 57.404 33.333 0.00 0.00 39.30 2.78
755 1774 5.738118 ATTTGGCACATTGTTGAAACTTG 57.262 34.783 0.00 0.00 39.30 3.16
756 1775 4.462508 TTGGCACATTGTTGAAACTTGA 57.537 36.364 0.00 0.00 39.30 3.02
757 1776 4.462508 TGGCACATTGTTGAAACTTGAA 57.537 36.364 0.00 0.00 0.00 2.69
758 1777 4.825422 TGGCACATTGTTGAAACTTGAAA 58.175 34.783 0.00 0.00 0.00 2.69
759 1778 5.426504 TGGCACATTGTTGAAACTTGAAAT 58.573 33.333 0.00 0.00 0.00 2.17
760 1779 5.523188 TGGCACATTGTTGAAACTTGAAATC 59.477 36.000 0.00 0.00 0.00 2.17
796 1826 0.040058 TAGAAGGTGCGGTAGGTGGA 59.960 55.000 0.00 0.00 0.00 4.02
916 1982 3.259064 TGCCACTCGTGCTTATAAAGAC 58.741 45.455 0.00 0.00 0.00 3.01
977 2047 7.298374 ACAGATATACAGGACAGGAGTATCAA 58.702 38.462 0.00 0.00 36.25 2.57
1107 2177 1.206371 GTAAAGGGGCTGAGCTACGAA 59.794 52.381 3.72 0.00 0.00 3.85
1329 2399 3.405093 CTTCTGGGCCGCCTATGCA 62.405 63.158 9.86 0.00 37.32 3.96
1384 2642 2.501223 TACCTCTCGTTGCGCTTGGG 62.501 60.000 9.73 0.00 0.00 4.12
1438 3081 1.205064 CAGCTGTTTCCTTCGTGCG 59.795 57.895 5.25 0.00 0.00 5.34
1457 3100 1.599047 CCGGCATCCTCAAGACAGT 59.401 57.895 0.00 0.00 0.00 3.55
1522 3165 0.246635 GCTCCGACACTTGGAAGCTA 59.753 55.000 0.00 0.00 34.44 3.32
1737 3397 4.451150 CCGGTCAAGGCGCTGCTA 62.451 66.667 7.64 0.00 0.00 3.49
1837 3771 2.365408 AAAGATCTCGTCGTTCCACC 57.635 50.000 0.00 0.00 0.00 4.61
1851 3785 3.130633 GTTCCACCATGGCAAAAGAAAC 58.869 45.455 13.04 3.48 37.47 2.78
1922 3856 1.609208 AGCTGTTTTCACGCCAAGAT 58.391 45.000 0.00 0.00 0.00 2.40
1939 3873 6.073222 CGCCAAGATTTGAACTGTTACTACTT 60.073 38.462 0.00 0.00 0.00 2.24
1947 3884 1.897802 ACTGTTACTACTTGGTCGGGG 59.102 52.381 0.00 0.00 0.00 5.73
1993 3930 4.006319 TCGTGGTCATGAATAATGCACAA 58.994 39.130 0.00 0.00 36.11 3.33
2024 3962 4.991472 TCTCTTCGATCTGAGTTGTGATG 58.009 43.478 9.41 0.00 0.00 3.07
2068 4006 0.842613 CGTCGTCGATCTTGCATCTG 59.157 55.000 0.00 0.00 39.71 2.90
2169 4127 2.717639 ATAGCTGTGGGTGGTGATTC 57.282 50.000 0.00 0.00 0.00 2.52
2171 4129 2.040544 GCTGTGGGTGGTGATTCCG 61.041 63.158 0.00 0.00 39.52 4.30
2228 4187 3.108376 AGGAATCACTACTCCCTCCAAC 58.892 50.000 0.00 0.00 31.50 3.77
2229 4188 3.108376 GGAATCACTACTCCCTCCAACT 58.892 50.000 0.00 0.00 0.00 3.16
2244 4203 6.838612 TCCCTCCAACTCATATTAATTTTGGG 59.161 38.462 0.00 0.00 35.26 4.12
2267 4226 9.492973 TGGGTGATTTAGTAACTTTGTACTAAC 57.507 33.333 4.68 0.00 43.15 2.34
2275 4234 6.675987 AGTAACTTTGTACTAACTCCGTGAG 58.324 40.000 0.00 0.03 32.42 3.51
2282 4241 8.524870 TTTGTACTAACTCCGTGAGAATTAAC 57.475 34.615 7.76 2.38 33.32 2.01
2300 4259 2.029838 ACATGGATCGAGAAAGCACC 57.970 50.000 0.00 0.00 0.00 5.01
2337 4296 0.539051 GTAGTGCATGTGCTCCCTCT 59.461 55.000 6.55 0.83 42.66 3.69
2375 4334 8.429493 TCTGCATATTAGATTTGACTGAAGTG 57.571 34.615 0.00 0.00 0.00 3.16
2557 4518 6.746745 AAGTTTGACTTCGACCAAAGTTAA 57.253 33.333 18.11 6.71 41.44 2.01
2563 4524 5.062934 TGACTTCGACCAAAGTTAATATGCG 59.937 40.000 0.00 0.00 39.55 4.73
2572 4533 8.288689 ACCAAAGTTAATATGCGGAGTAAATT 57.711 30.769 0.00 0.00 0.00 1.82
2611 4572 9.376075 GTATCATAACTAGTATCATGCATGCTT 57.624 33.333 22.25 10.16 0.00 3.91
2618 4579 7.957002 ACTAGTATCATGCATGCTTACTAAGT 58.043 34.615 29.38 26.26 32.96 2.24
2619 4580 7.869937 ACTAGTATCATGCATGCTTACTAAGTG 59.130 37.037 29.38 24.23 32.96 3.16
2693 4656 8.896722 ATCATTATAAATACTACTCCCTCCGT 57.103 34.615 0.00 0.00 0.00 4.69
2694 4657 8.345724 TCATTATAAATACTACTCCCTCCGTC 57.654 38.462 0.00 0.00 0.00 4.79
2695 4658 8.168725 TCATTATAAATACTACTCCCTCCGTCT 58.831 37.037 0.00 0.00 0.00 4.18
2696 4659 7.992754 TTATAAATACTACTCCCTCCGTCTC 57.007 40.000 0.00 0.00 0.00 3.36
2697 4660 3.947612 AATACTACTCCCTCCGTCTCA 57.052 47.619 0.00 0.00 0.00 3.27
2698 4661 4.456662 AATACTACTCCCTCCGTCTCAT 57.543 45.455 0.00 0.00 0.00 2.90
2699 4662 5.579753 AATACTACTCCCTCCGTCTCATA 57.420 43.478 0.00 0.00 0.00 2.15
2700 4663 3.947612 ACTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
2701 4664 4.456662 ACTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
2702 4665 4.145807 ACTACTCCCTCCGTCTCATAATG 58.854 47.826 0.00 0.00 0.00 1.90
2703 4666 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
2704 4667 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
2705 4668 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
2706 4669 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
2707 4670 4.800023 TCCCTCCGTCTCATAATGTAAGA 58.200 43.478 0.00 0.00 0.00 2.10
2708 4671 4.583489 TCCCTCCGTCTCATAATGTAAGAC 59.417 45.833 0.00 0.00 36.82 3.01
2716 4679 7.938971 GTCTCATAATGTAAGACGCTTTTTG 57.061 36.000 0.00 0.00 31.01 2.44
2717 4680 7.739295 GTCTCATAATGTAAGACGCTTTTTGA 58.261 34.615 0.00 0.00 31.01 2.69
2718 4681 7.688578 GTCTCATAATGTAAGACGCTTTTTGAC 59.311 37.037 0.00 0.00 31.01 3.18
2719 4682 7.386573 TCTCATAATGTAAGACGCTTTTTGACA 59.613 33.333 0.00 0.00 0.00 3.58
2720 4683 8.039603 TCATAATGTAAGACGCTTTTTGACAT 57.960 30.769 0.00 0.25 0.00 3.06
2721 4684 8.511321 TCATAATGTAAGACGCTTTTTGACATT 58.489 29.630 15.86 15.86 38.95 2.71
2722 4685 9.767684 CATAATGTAAGACGCTTTTTGACATTA 57.232 29.630 17.77 17.77 40.56 1.90
2723 4686 9.988350 ATAATGTAAGACGCTTTTTGACATTAG 57.012 29.630 18.97 0.00 39.99 1.73
2724 4687 6.854496 TGTAAGACGCTTTTTGACATTAGT 57.146 33.333 0.00 0.00 0.00 2.24
2725 4688 6.655062 TGTAAGACGCTTTTTGACATTAGTG 58.345 36.000 0.00 0.00 0.00 2.74
2726 4689 5.751243 AAGACGCTTTTTGACATTAGTGT 57.249 34.783 0.00 0.00 42.49 3.55
2727 4690 6.854496 AAGACGCTTTTTGACATTAGTGTA 57.146 33.333 0.00 0.00 39.09 2.90
2728 4691 6.467723 AGACGCTTTTTGACATTAGTGTAG 57.532 37.500 0.00 0.00 39.09 2.74
2729 4692 5.989777 AGACGCTTTTTGACATTAGTGTAGT 59.010 36.000 0.00 0.00 39.09 2.73
2730 4693 5.985781 ACGCTTTTTGACATTAGTGTAGTG 58.014 37.500 0.00 0.00 39.09 2.74
2731 4694 5.526111 ACGCTTTTTGACATTAGTGTAGTGT 59.474 36.000 0.00 0.00 39.09 3.55
2732 4695 6.071463 CGCTTTTTGACATTAGTGTAGTGTC 58.929 40.000 0.00 3.35 43.31 3.67
2759 4722 7.931578 AAAACATCTTACATTATTGGACGGA 57.068 32.000 0.00 0.00 0.00 4.69
2760 4723 7.553881 AAACATCTTACATTATTGGACGGAG 57.446 36.000 0.00 0.00 0.00 4.63
2761 4724 5.611374 ACATCTTACATTATTGGACGGAGG 58.389 41.667 0.00 0.00 0.00 4.30
2762 4725 4.682778 TCTTACATTATTGGACGGAGGG 57.317 45.455 0.00 0.00 0.00 4.30
2763 4726 4.291792 TCTTACATTATTGGACGGAGGGA 58.708 43.478 0.00 0.00 0.00 4.20
2764 4727 4.344102 TCTTACATTATTGGACGGAGGGAG 59.656 45.833 0.00 0.00 0.00 4.30
2765 4728 2.478292 ACATTATTGGACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
2766 4729 3.649843 ACATTATTGGACGGAGGGAGTA 58.350 45.455 0.00 0.00 0.00 2.59
2767 4730 3.387050 ACATTATTGGACGGAGGGAGTAC 59.613 47.826 0.00 0.00 0.00 2.73
2779 4742 5.309020 ACGGAGGGAGTACACTAGTATATGA 59.691 44.000 0.00 0.00 31.84 2.15
2780 4743 6.012683 ACGGAGGGAGTACACTAGTATATGAT 60.013 42.308 0.00 0.00 31.84 2.45
2781 4744 6.885376 CGGAGGGAGTACACTAGTATATGATT 59.115 42.308 0.00 0.00 31.84 2.57
2810 4773 4.937201 TCTGAGTGACACAAGTGTATGT 57.063 40.909 8.59 0.00 45.05 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.673441 GAGTCGAGCTAGCTTGTTAATGA 58.327 43.478 27.60 8.14 0.00 2.57
4 5 2.095532 GTCGAGTCGAGCTAGCTTGTTA 59.904 50.000 27.60 10.26 36.23 2.41
6 7 0.448593 GTCGAGTCGAGCTAGCTTGT 59.551 55.000 27.60 12.77 36.23 3.16
8 9 1.011333 GAGTCGAGTCGAGCTAGCTT 58.989 55.000 20.42 1.67 36.23 3.74
9 10 1.149361 CGAGTCGAGTCGAGCTAGCT 61.149 60.000 33.61 19.45 42.85 3.32
10 11 1.274476 CGAGTCGAGTCGAGCTAGC 59.726 63.158 33.61 6.62 42.85 3.42
11 12 1.000884 AACGAGTCGAGTCGAGCTAG 58.999 55.000 40.68 17.40 42.85 3.42
12 13 1.923204 GTAACGAGTCGAGTCGAGCTA 59.077 52.381 40.68 26.53 42.85 3.32
13 14 0.720590 GTAACGAGTCGAGTCGAGCT 59.279 55.000 40.68 27.41 42.85 4.09
14 15 0.720590 AGTAACGAGTCGAGTCGAGC 59.279 55.000 40.68 28.87 42.85 5.03
15 16 5.607147 CGTTATAGTAACGAGTCGAGTCGAG 60.607 48.000 40.68 19.43 45.64 4.04
16 17 4.205181 CGTTATAGTAACGAGTCGAGTCGA 59.795 45.833 40.68 23.28 45.64 4.20
17 18 4.205181 TCGTTATAGTAACGAGTCGAGTCG 59.795 45.833 34.64 34.64 46.21 4.18
18 19 5.627802 TCGTTATAGTAACGAGTCGAGTC 57.372 43.478 21.50 10.37 46.21 3.36
27 28 7.919313 TGGATTTAAGCTCGTTATAGTAACG 57.081 36.000 14.21 14.21 44.29 3.18
28 29 9.525409 TCTTGGATTTAAGCTCGTTATAGTAAC 57.475 33.333 0.00 0.00 0.00 2.50
31 32 9.046296 CAATCTTGGATTTAAGCTCGTTATAGT 57.954 33.333 0.00 0.00 0.00 2.12
34 35 8.337434 AGCCAATCTTGGATTTAAGCTCGTTAT 61.337 37.037 13.14 0.00 46.48 1.89
35 36 7.079117 AGCCAATCTTGGATTTAAGCTCGTTA 61.079 38.462 13.14 0.00 46.48 3.18
36 37 6.325984 AGCCAATCTTGGATTTAAGCTCGTT 61.326 40.000 13.14 0.00 46.48 3.85
37 38 4.868300 AGCCAATCTTGGATTTAAGCTCGT 60.868 41.667 13.14 0.00 46.48 4.18
38 39 3.629398 AGCCAATCTTGGATTTAAGCTCG 59.371 43.478 13.14 0.00 46.48 5.03
50 51 2.561733 TACGAGTCGAGCCAATCTTG 57.438 50.000 21.50 0.00 0.00 3.02
51 52 4.338682 AGTTATACGAGTCGAGCCAATCTT 59.661 41.667 21.50 0.00 0.00 2.40
52 53 3.884091 AGTTATACGAGTCGAGCCAATCT 59.116 43.478 21.50 5.67 0.00 2.40
53 54 4.220572 GAGTTATACGAGTCGAGCCAATC 58.779 47.826 21.50 6.65 0.00 2.67
54 55 3.303857 CGAGTTATACGAGTCGAGCCAAT 60.304 47.826 21.50 6.90 43.39 3.16
55 56 2.031314 CGAGTTATACGAGTCGAGCCAA 59.969 50.000 21.50 4.61 43.39 4.52
56 57 1.596260 CGAGTTATACGAGTCGAGCCA 59.404 52.381 21.50 1.30 43.39 4.75
57 58 1.596727 ACGAGTTATACGAGTCGAGCC 59.403 52.381 21.50 2.06 43.39 4.70
58 59 2.283617 TCACGAGTTATACGAGTCGAGC 59.716 50.000 21.50 0.00 43.39 5.03
59 60 3.602038 GCTCACGAGTTATACGAGTCGAG 60.602 52.174 21.50 2.16 43.39 4.04
60 61 2.283617 GCTCACGAGTTATACGAGTCGA 59.716 50.000 21.50 3.11 43.39 4.20
61 62 2.284684 AGCTCACGAGTTATACGAGTCG 59.715 50.000 11.85 11.85 45.51 4.18
62 63 3.546417 CCAGCTCACGAGTTATACGAGTC 60.546 52.174 0.00 0.00 34.70 3.36
63 64 2.355132 CCAGCTCACGAGTTATACGAGT 59.645 50.000 0.00 0.00 34.70 4.18
64 65 2.855187 GCCAGCTCACGAGTTATACGAG 60.855 54.545 0.00 0.00 34.70 4.18
65 66 1.065102 GCCAGCTCACGAGTTATACGA 59.935 52.381 0.00 0.00 34.70 3.43
66 67 1.065701 AGCCAGCTCACGAGTTATACG 59.934 52.381 0.00 0.00 0.00 3.06
67 68 2.733517 GAGCCAGCTCACGAGTTATAC 58.266 52.381 14.70 0.00 42.31 1.47
68 69 1.333931 CGAGCCAGCTCACGAGTTATA 59.666 52.381 19.08 0.00 42.86 0.98
69 70 0.101399 CGAGCCAGCTCACGAGTTAT 59.899 55.000 19.08 0.00 42.86 1.89
70 71 1.241990 ACGAGCCAGCTCACGAGTTA 61.242 55.000 19.08 0.00 42.86 2.24
71 72 2.088674 AACGAGCCAGCTCACGAGTT 62.089 55.000 19.08 11.63 42.86 3.01
72 73 2.088674 AAACGAGCCAGCTCACGAGT 62.089 55.000 19.08 6.31 42.86 4.18
73 74 0.109272 TAAACGAGCCAGCTCACGAG 60.109 55.000 19.08 5.69 42.86 4.18
74 75 0.109272 CTAAACGAGCCAGCTCACGA 60.109 55.000 19.08 1.13 42.86 4.35
75 76 1.687494 GCTAAACGAGCCAGCTCACG 61.687 60.000 19.08 9.54 46.41 4.35
76 77 2.082354 GCTAAACGAGCCAGCTCAC 58.918 57.895 19.08 0.00 46.41 3.51
77 78 4.598257 GCTAAACGAGCCAGCTCA 57.402 55.556 19.08 0.00 46.41 4.26
85 86 5.283060 ACAAGCTTAACATGCTAAACGAG 57.717 39.130 0.00 0.00 40.22 4.18
86 87 5.682943 AACAAGCTTAACATGCTAAACGA 57.317 34.783 0.00 0.00 40.22 3.85
87 88 7.801315 TCTTTAACAAGCTTAACATGCTAAACG 59.199 33.333 0.00 0.00 40.22 3.60
88 89 9.626045 ATCTTTAACAAGCTTAACATGCTAAAC 57.374 29.630 0.00 0.00 40.22 2.01
92 93 9.177608 TCATATCTTTAACAAGCTTAACATGCT 57.822 29.630 0.00 0.00 43.32 3.79
93 94 9.787532 TTCATATCTTTAACAAGCTTAACATGC 57.212 29.630 0.00 0.00 0.00 4.06
102 103 9.937175 GGTCTAATGTTCATATCTTTAACAAGC 57.063 33.333 0.00 0.00 36.75 4.01
115 116 9.832445 ATCGTATTTGTAAGGTCTAATGTTCAT 57.168 29.630 0.00 0.00 0.00 2.57
151 152 9.618890 ACATATGCACATACTAAATTCTCAGTT 57.381 29.630 1.58 0.00 0.00 3.16
152 153 9.049523 CACATATGCACATACTAAATTCTCAGT 57.950 33.333 1.58 0.00 0.00 3.41
153 154 8.501580 CCACATATGCACATACTAAATTCTCAG 58.498 37.037 1.58 0.00 0.00 3.35
154 155 7.992608 ACCACATATGCACATACTAAATTCTCA 59.007 33.333 1.58 0.00 0.00 3.27
155 156 8.383318 ACCACATATGCACATACTAAATTCTC 57.617 34.615 1.58 0.00 0.00 2.87
156 157 7.992608 TGACCACATATGCACATACTAAATTCT 59.007 33.333 1.58 0.00 0.00 2.40
157 158 8.153479 TGACCACATATGCACATACTAAATTC 57.847 34.615 1.58 0.00 0.00 2.17
158 159 8.570488 CATGACCACATATGCACATACTAAATT 58.430 33.333 1.58 0.00 35.09 1.82
159 160 7.720957 ACATGACCACATATGCACATACTAAAT 59.279 33.333 1.58 0.00 35.09 1.40
160 161 7.053498 ACATGACCACATATGCACATACTAAA 58.947 34.615 1.58 0.00 35.09 1.85
161 162 6.591001 ACATGACCACATATGCACATACTAA 58.409 36.000 1.58 0.00 35.09 2.24
162 163 6.173427 ACATGACCACATATGCACATACTA 57.827 37.500 1.58 0.00 35.09 1.82
163 164 5.039920 ACATGACCACATATGCACATACT 57.960 39.130 1.58 0.00 35.09 2.12
164 165 5.107491 CGTACATGACCACATATGCACATAC 60.107 44.000 1.58 0.00 35.09 2.39
165 166 4.987912 CGTACATGACCACATATGCACATA 59.012 41.667 1.58 0.00 35.09 2.29
166 167 3.809279 CGTACATGACCACATATGCACAT 59.191 43.478 1.58 1.08 35.09 3.21
167 168 3.194062 CGTACATGACCACATATGCACA 58.806 45.455 1.58 0.00 35.09 4.57
168 169 3.001228 CACGTACATGACCACATATGCAC 59.999 47.826 1.58 0.00 35.09 4.57
169 170 3.194062 CACGTACATGACCACATATGCA 58.806 45.455 1.58 0.00 35.09 3.96
170 171 3.001228 CACACGTACATGACCACATATGC 59.999 47.826 1.58 0.00 35.09 3.14
171 172 4.429108 TCACACGTACATGACCACATATG 58.571 43.478 0.00 0.00 35.09 1.78
172 173 4.159693 ACTCACACGTACATGACCACATAT 59.840 41.667 0.00 0.00 35.09 1.78
173 174 3.508402 ACTCACACGTACATGACCACATA 59.492 43.478 0.00 0.00 35.09 2.29
174 175 2.299013 ACTCACACGTACATGACCACAT 59.701 45.455 0.00 0.00 37.19 3.21
175 176 1.684450 ACTCACACGTACATGACCACA 59.316 47.619 0.00 0.00 0.00 4.17
176 177 2.030185 AGACTCACACGTACATGACCAC 60.030 50.000 0.00 0.00 0.00 4.16
177 178 2.228103 GAGACTCACACGTACATGACCA 59.772 50.000 0.00 0.00 0.00 4.02
178 179 2.488545 AGAGACTCACACGTACATGACC 59.511 50.000 5.02 0.00 0.00 4.02
179 180 3.833545 AGAGACTCACACGTACATGAC 57.166 47.619 5.02 0.00 0.00 3.06
180 181 3.057526 CCAAGAGACTCACACGTACATGA 60.058 47.826 5.02 0.00 0.00 3.07
181 182 3.245797 CCAAGAGACTCACACGTACATG 58.754 50.000 5.02 0.00 0.00 3.21
182 183 2.231478 CCCAAGAGACTCACACGTACAT 59.769 50.000 5.02 0.00 0.00 2.29
183 184 1.611977 CCCAAGAGACTCACACGTACA 59.388 52.381 5.02 0.00 0.00 2.90
184 185 1.612463 ACCCAAGAGACTCACACGTAC 59.388 52.381 5.02 0.00 0.00 3.67
185 186 1.611977 CACCCAAGAGACTCACACGTA 59.388 52.381 5.02 0.00 0.00 3.57
186 187 0.389391 CACCCAAGAGACTCACACGT 59.611 55.000 5.02 0.00 0.00 4.49
187 188 0.673985 TCACCCAAGAGACTCACACG 59.326 55.000 5.02 0.00 0.00 4.49
188 189 1.689273 AGTCACCCAAGAGACTCACAC 59.311 52.381 5.02 0.00 39.42 3.82
189 190 2.088104 AGTCACCCAAGAGACTCACA 57.912 50.000 5.02 0.00 39.42 3.58
193 194 1.536943 GCCGAGTCACCCAAGAGACT 61.537 60.000 0.00 0.00 45.30 3.24
194 195 1.079750 GCCGAGTCACCCAAGAGAC 60.080 63.158 0.00 0.00 34.15 3.36
195 196 2.283529 GGCCGAGTCACCCAAGAGA 61.284 63.158 0.00 0.00 0.00 3.10
196 197 2.266055 GGCCGAGTCACCCAAGAG 59.734 66.667 0.00 0.00 0.00 2.85
197 198 3.691342 CGGCCGAGTCACCCAAGA 61.691 66.667 24.07 0.00 0.00 3.02
198 199 3.649277 CTCGGCCGAGTCACCCAAG 62.649 68.421 40.77 18.18 37.47 3.61
199 200 3.691342 CTCGGCCGAGTCACCCAA 61.691 66.667 40.77 12.14 37.47 4.12
220 221 3.970410 TCCCAGCACAAGGCCCAG 61.970 66.667 0.00 0.00 46.50 4.45
221 222 4.284550 GTCCCAGCACAAGGCCCA 62.285 66.667 0.00 0.00 46.50 5.36
222 223 4.284550 TGTCCCAGCACAAGGCCC 62.285 66.667 0.00 0.00 46.50 5.80
223 224 2.985847 GTGTCCCAGCACAAGGCC 60.986 66.667 0.00 0.00 46.50 5.19
224 225 2.203337 TGTGTCCCAGCACAAGGC 60.203 61.111 0.00 0.00 45.17 4.35
228 229 1.152984 CACCTTGTGTCCCAGCACA 60.153 57.895 0.00 0.00 46.30 4.57
229 230 0.751643 AACACCTTGTGTCCCAGCAC 60.752 55.000 0.00 0.00 46.79 4.40
230 231 0.033601 AAACACCTTGTGTCCCAGCA 60.034 50.000 0.00 0.00 46.79 4.41
231 232 1.880027 CTAAACACCTTGTGTCCCAGC 59.120 52.381 0.00 0.00 46.79 4.85
232 233 3.208747 ACTAAACACCTTGTGTCCCAG 57.791 47.619 0.00 1.68 46.79 4.45
233 234 3.495453 GCTACTAAACACCTTGTGTCCCA 60.495 47.826 0.00 0.00 46.79 4.37
234 235 3.072211 GCTACTAAACACCTTGTGTCCC 58.928 50.000 0.00 0.00 46.79 4.46
235 236 4.004196 AGCTACTAAACACCTTGTGTCC 57.996 45.455 0.00 0.00 46.79 4.02
236 237 8.943909 AATATAGCTACTAAACACCTTGTGTC 57.056 34.615 0.00 0.00 46.79 3.67
286 287 5.405269 GGTAACTCGTTAAGCTCGGTAAAAA 59.595 40.000 0.00 0.00 0.00 1.94
287 288 4.923281 GGTAACTCGTTAAGCTCGGTAAAA 59.077 41.667 0.00 0.00 0.00 1.52
288 289 4.485163 GGTAACTCGTTAAGCTCGGTAAA 58.515 43.478 0.00 0.00 0.00 2.01
289 290 3.119495 GGGTAACTCGTTAAGCTCGGTAA 60.119 47.826 0.00 0.00 0.00 2.85
290 291 2.423538 GGGTAACTCGTTAAGCTCGGTA 59.576 50.000 0.00 0.00 0.00 4.02
291 292 1.203287 GGGTAACTCGTTAAGCTCGGT 59.797 52.381 0.00 0.00 0.00 4.69
292 293 1.796617 CGGGTAACTCGTTAAGCTCGG 60.797 57.143 0.00 0.00 0.00 4.63
293 294 1.131126 TCGGGTAACTCGTTAAGCTCG 59.869 52.381 0.00 0.00 0.00 5.03
294 295 2.163211 ACTCGGGTAACTCGTTAAGCTC 59.837 50.000 0.00 0.00 0.00 4.09
295 296 2.165998 ACTCGGGTAACTCGTTAAGCT 58.834 47.619 0.00 0.00 0.00 3.74
296 297 2.643933 ACTCGGGTAACTCGTTAAGC 57.356 50.000 0.00 0.00 0.00 3.09
297 298 4.393062 TGAGTACTCGGGTAACTCGTTAAG 59.607 45.833 17.85 0.00 33.24 1.85
298 299 4.323417 TGAGTACTCGGGTAACTCGTTAA 58.677 43.478 17.85 0.00 33.24 2.01
299 300 3.937814 TGAGTACTCGGGTAACTCGTTA 58.062 45.455 17.85 0.00 33.24 3.18
300 301 2.783135 TGAGTACTCGGGTAACTCGTT 58.217 47.619 17.85 0.00 33.24 3.85
301 302 2.479566 TGAGTACTCGGGTAACTCGT 57.520 50.000 17.85 0.00 33.24 4.18
302 303 2.941064 TCATGAGTACTCGGGTAACTCG 59.059 50.000 17.85 6.92 33.24 4.18
303 304 4.197750 TCTCATGAGTACTCGGGTAACTC 58.802 47.826 21.92 14.47 32.25 3.01
304 305 4.232188 TCTCATGAGTACTCGGGTAACT 57.768 45.455 21.92 0.00 0.00 2.24
305 306 4.579340 TGATCTCATGAGTACTCGGGTAAC 59.421 45.833 21.92 7.39 0.00 2.50
306 307 4.788679 TGATCTCATGAGTACTCGGGTAA 58.211 43.478 21.92 4.18 0.00 2.85
307 308 4.390264 CTGATCTCATGAGTACTCGGGTA 58.610 47.826 21.92 0.00 0.00 3.69
308 309 3.218453 CTGATCTCATGAGTACTCGGGT 58.782 50.000 21.92 0.00 0.00 5.28
309 310 2.030363 GCTGATCTCATGAGTACTCGGG 60.030 54.545 21.92 12.15 0.00 5.14
310 311 2.884012 AGCTGATCTCATGAGTACTCGG 59.116 50.000 21.92 20.02 0.00 4.63
311 312 3.363871 CGAGCTGATCTCATGAGTACTCG 60.364 52.174 25.31 25.31 41.98 4.18
312 313 3.563808 ACGAGCTGATCTCATGAGTACTC 59.436 47.826 21.92 16.32 41.98 2.59
313 314 3.550820 ACGAGCTGATCTCATGAGTACT 58.449 45.455 21.92 12.73 41.98 2.73
314 315 3.980646 ACGAGCTGATCTCATGAGTAC 57.019 47.619 21.92 16.44 41.98 2.73
315 316 4.991153 AAACGAGCTGATCTCATGAGTA 57.009 40.909 21.92 9.67 41.98 2.59
316 317 3.883830 AAACGAGCTGATCTCATGAGT 57.116 42.857 21.92 9.83 41.98 3.41
317 318 5.347342 AGTTAAACGAGCTGATCTCATGAG 58.653 41.667 17.07 17.07 41.98 2.90
318 319 5.330455 AGTTAAACGAGCTGATCTCATGA 57.670 39.130 0.00 0.00 41.98 3.07
319 320 5.220548 CCAAGTTAAACGAGCTGATCTCATG 60.221 44.000 0.00 0.00 41.98 3.07
320 321 4.872691 CCAAGTTAAACGAGCTGATCTCAT 59.127 41.667 0.00 0.00 41.98 2.90
321 322 4.245660 CCAAGTTAAACGAGCTGATCTCA 58.754 43.478 0.00 0.00 41.98 3.27
322 323 4.092091 CACCAAGTTAAACGAGCTGATCTC 59.908 45.833 0.00 0.00 38.47 2.75
323 324 3.997021 CACCAAGTTAAACGAGCTGATCT 59.003 43.478 0.00 0.00 0.00 2.75
324 325 3.746492 ACACCAAGTTAAACGAGCTGATC 59.254 43.478 0.00 0.00 0.00 2.92
325 326 3.498397 CACACCAAGTTAAACGAGCTGAT 59.502 43.478 0.00 0.00 0.00 2.90
326 327 2.869801 CACACCAAGTTAAACGAGCTGA 59.130 45.455 0.00 0.00 0.00 4.26
327 328 2.612212 ACACACCAAGTTAAACGAGCTG 59.388 45.455 0.00 0.00 0.00 4.24
328 329 2.914059 ACACACCAAGTTAAACGAGCT 58.086 42.857 0.00 0.00 0.00 4.09
329 330 4.799419 TTACACACCAAGTTAAACGAGC 57.201 40.909 0.00 0.00 0.00 5.03
330 331 6.109320 TGTTTACACACCAAGTTAAACGAG 57.891 37.500 0.00 0.00 36.98 4.18
331 332 6.492007 TTGTTTACACACCAAGTTAAACGA 57.508 33.333 0.00 0.00 36.98 3.85
332 333 7.190871 AGATTGTTTACACACCAAGTTAAACG 58.809 34.615 0.00 0.00 36.98 3.60
333 334 8.920509 AAGATTGTTTACACACCAAGTTAAAC 57.079 30.769 0.00 0.00 35.99 2.01
337 338 8.745590 AGTTTAAGATTGTTTACACACCAAGTT 58.254 29.630 0.00 0.00 30.32 2.66
338 339 8.288689 AGTTTAAGATTGTTTACACACCAAGT 57.711 30.769 0.00 0.00 30.32 3.16
342 343 9.177304 GCTTTAGTTTAAGATTGTTTACACACC 57.823 33.333 0.00 0.00 30.32 4.16
343 344 9.946165 AGCTTTAGTTTAAGATTGTTTACACAC 57.054 29.630 0.00 0.00 30.32 3.82
347 348 9.331106 GCTGAGCTTTAGTTTAAGATTGTTTAC 57.669 33.333 0.00 0.00 0.00 2.01
348 349 9.284968 AGCTGAGCTTTAGTTTAAGATTGTTTA 57.715 29.630 0.00 0.00 33.89 2.01
349 350 8.171164 AGCTGAGCTTTAGTTTAAGATTGTTT 57.829 30.769 0.00 0.00 33.89 2.83
350 351 7.751768 AGCTGAGCTTTAGTTTAAGATTGTT 57.248 32.000 0.00 0.00 33.89 2.83
366 367 0.539051 ATAACGAGCCAAGCTGAGCT 59.461 50.000 10.37 10.37 39.88 4.09
367 368 1.328986 GAATAACGAGCCAAGCTGAGC 59.671 52.381 0.00 0.00 39.88 4.26
368 369 2.898705 AGAATAACGAGCCAAGCTGAG 58.101 47.619 0.00 0.00 39.88 3.35
369 370 3.262420 GAAGAATAACGAGCCAAGCTGA 58.738 45.455 0.00 0.00 39.88 4.26
370 371 2.029728 CGAAGAATAACGAGCCAAGCTG 59.970 50.000 0.00 0.00 39.88 4.24
371 372 2.094182 TCGAAGAATAACGAGCCAAGCT 60.094 45.455 0.00 0.00 43.88 3.74
372 373 2.268298 TCGAAGAATAACGAGCCAAGC 58.732 47.619 0.00 0.00 34.49 4.01
379 380 4.151258 ACACGAACTCGAAGAATAACGA 57.849 40.909 6.05 0.00 43.02 3.85
380 381 3.003312 CGACACGAACTCGAAGAATAACG 60.003 47.826 6.05 0.00 43.02 3.18
381 382 4.153986 TCGACACGAACTCGAAGAATAAC 58.846 43.478 6.05 0.00 43.02 1.89
382 383 4.408993 TCGACACGAACTCGAAGAATAA 57.591 40.909 6.05 0.00 43.02 1.40
383 384 4.611310 ATCGACACGAACTCGAAGAATA 57.389 40.909 6.05 0.00 43.10 1.75
384 385 2.983402 TCGACACGAACTCGAAGAAT 57.017 45.000 6.05 0.00 43.02 2.40
385 386 2.983402 ATCGACACGAACTCGAAGAA 57.017 45.000 6.05 0.00 43.10 2.52
386 387 2.723923 CGAATCGACACGAACTCGAAGA 60.724 50.000 17.47 0.30 43.12 2.87
387 388 1.573596 CGAATCGACACGAACTCGAAG 59.426 52.381 17.47 0.72 43.12 3.79
388 389 1.195222 TCGAATCGACACGAACTCGAA 59.805 47.619 20.44 10.49 44.66 3.71
389 390 0.792031 TCGAATCGACACGAACTCGA 59.208 50.000 19.52 19.52 45.06 4.04
390 391 1.172700 CTCGAATCGACACGAACTCG 58.827 55.000 14.74 16.75 42.42 4.18
391 392 2.167591 GACTCGAATCGACACGAACTC 58.832 52.381 14.74 9.62 39.99 3.01
392 393 1.534163 TGACTCGAATCGACACGAACT 59.466 47.619 14.74 5.34 39.99 3.01
393 394 1.959747 TGACTCGAATCGACACGAAC 58.040 50.000 14.74 12.28 39.99 3.95
394 395 2.031420 ACTTGACTCGAATCGACACGAA 60.031 45.455 14.74 0.88 39.99 3.85
395 396 1.534163 ACTTGACTCGAATCGACACGA 59.466 47.619 0.00 13.54 41.13 4.35
396 397 1.905687 GACTTGACTCGAATCGACACG 59.094 52.381 0.00 0.00 0.00 4.49
397 398 2.657372 GTGACTTGACTCGAATCGACAC 59.343 50.000 0.00 2.83 0.00 3.67
398 399 2.292292 TGTGACTTGACTCGAATCGACA 59.708 45.455 0.00 0.00 0.00 4.35
399 400 2.929960 TGTGACTTGACTCGAATCGAC 58.070 47.619 0.00 0.00 0.00 4.20
400 401 3.565516 CTTGTGACTTGACTCGAATCGA 58.434 45.455 4.91 4.91 0.00 3.59
401 402 2.091277 GCTTGTGACTTGACTCGAATCG 59.909 50.000 0.00 0.00 0.00 3.34
402 403 3.321497 AGCTTGTGACTTGACTCGAATC 58.679 45.455 0.00 0.00 0.00 2.52
403 404 3.393089 AGCTTGTGACTTGACTCGAAT 57.607 42.857 0.00 0.00 0.00 3.34
404 405 2.890808 AGCTTGTGACTTGACTCGAA 57.109 45.000 0.00 0.00 0.00 3.71
405 406 2.885266 AGTAGCTTGTGACTTGACTCGA 59.115 45.455 0.00 0.00 0.00 4.04
406 407 3.238441 GAGTAGCTTGTGACTTGACTCG 58.762 50.000 0.00 0.00 0.00 4.18
407 408 4.244425 TGAGTAGCTTGTGACTTGACTC 57.756 45.455 0.00 0.00 33.92 3.36
408 409 4.881019 ATGAGTAGCTTGTGACTTGACT 57.119 40.909 0.00 0.00 0.00 3.41
409 410 5.931441 AAATGAGTAGCTTGTGACTTGAC 57.069 39.130 0.00 0.00 0.00 3.18
410 411 5.639506 GCTAAATGAGTAGCTTGTGACTTGA 59.360 40.000 0.00 0.00 42.73 3.02
411 412 5.862811 GCTAAATGAGTAGCTTGTGACTTG 58.137 41.667 0.00 0.00 42.73 3.16
421 422 2.047769 CTCGCGAGCTAAATGAGTAGC 58.952 52.381 25.07 0.00 45.77 3.58
422 423 3.341857 ACTCGCGAGCTAAATGAGTAG 57.658 47.619 34.83 8.85 38.09 2.57
423 424 3.777465 AACTCGCGAGCTAAATGAGTA 57.223 42.857 34.83 0.00 38.87 2.59
424 425 2.656560 AACTCGCGAGCTAAATGAGT 57.343 45.000 34.83 11.14 41.40 3.41
425 426 2.035342 CGAAACTCGCGAGCTAAATGAG 60.035 50.000 34.83 14.59 31.14 2.90
426 427 1.917955 CGAAACTCGCGAGCTAAATGA 59.082 47.619 34.83 0.00 31.14 2.57
427 428 1.917955 TCGAAACTCGCGAGCTAAATG 59.082 47.619 34.83 19.58 40.21 2.32
428 429 2.273370 TCGAAACTCGCGAGCTAAAT 57.727 45.000 34.83 16.82 40.21 1.40
429 430 3.778969 TCGAAACTCGCGAGCTAAA 57.221 47.368 34.83 14.77 40.21 1.85
451 452 3.646162 TGCTGAGAGTAGGACTGGAAAAA 59.354 43.478 0.00 0.00 0.00 1.94
452 453 3.239449 TGCTGAGAGTAGGACTGGAAAA 58.761 45.455 0.00 0.00 0.00 2.29
453 454 2.889512 TGCTGAGAGTAGGACTGGAAA 58.110 47.619 0.00 0.00 0.00 3.13
454 455 2.604912 TGCTGAGAGTAGGACTGGAA 57.395 50.000 0.00 0.00 0.00 3.53
455 456 2.604912 TTGCTGAGAGTAGGACTGGA 57.395 50.000 0.00 0.00 0.00 3.86
456 457 5.344743 TTTATTGCTGAGAGTAGGACTGG 57.655 43.478 0.00 0.00 0.00 4.00
457 458 4.808364 GCTTTATTGCTGAGAGTAGGACTG 59.192 45.833 0.00 0.00 0.00 3.51
458 459 4.714308 AGCTTTATTGCTGAGAGTAGGACT 59.286 41.667 0.00 0.00 42.33 3.85
459 460 5.017294 AGCTTTATTGCTGAGAGTAGGAC 57.983 43.478 0.00 0.00 42.33 3.85
460 461 5.423610 AGAAGCTTTATTGCTGAGAGTAGGA 59.576 40.000 0.00 0.00 43.24 2.94
461 462 5.669477 AGAAGCTTTATTGCTGAGAGTAGG 58.331 41.667 0.00 0.00 43.24 3.18
462 463 7.978975 ACTTAGAAGCTTTATTGCTGAGAGTAG 59.021 37.037 0.00 0.00 43.24 2.57
463 464 7.841956 ACTTAGAAGCTTTATTGCTGAGAGTA 58.158 34.615 0.00 0.00 43.24 2.59
464 465 6.706295 ACTTAGAAGCTTTATTGCTGAGAGT 58.294 36.000 0.00 0.00 43.24 3.24
465 466 8.885494 ATACTTAGAAGCTTTATTGCTGAGAG 57.115 34.615 0.00 0.00 43.24 3.20
466 467 9.672673 AAATACTTAGAAGCTTTATTGCTGAGA 57.327 29.630 0.00 0.00 43.24 3.27
469 470 9.846248 ACAAAATACTTAGAAGCTTTATTGCTG 57.154 29.630 0.00 4.88 43.24 4.41
498 499 2.030893 CCTGCATTCGTGCTCTCAAAAA 60.031 45.455 1.86 0.00 35.49 1.94
499 500 1.536766 CCTGCATTCGTGCTCTCAAAA 59.463 47.619 1.86 0.00 35.49 2.44
500 501 1.159285 CCTGCATTCGTGCTCTCAAA 58.841 50.000 1.86 0.00 35.49 2.69
501 502 0.035317 ACCTGCATTCGTGCTCTCAA 59.965 50.000 1.86 0.00 35.49 3.02
502 503 0.671472 CACCTGCATTCGTGCTCTCA 60.671 55.000 1.86 0.00 35.49 3.27
503 504 0.671781 ACACCTGCATTCGTGCTCTC 60.672 55.000 8.24 0.00 33.09 3.20
504 505 0.250467 AACACCTGCATTCGTGCTCT 60.250 50.000 8.24 0.00 33.09 4.09
505 506 0.166814 GAACACCTGCATTCGTGCTC 59.833 55.000 8.24 3.35 33.09 4.26
506 507 0.534877 TGAACACCTGCATTCGTGCT 60.535 50.000 8.24 0.00 33.09 4.40
507 508 0.385974 GTGAACACCTGCATTCGTGC 60.386 55.000 8.24 0.00 33.09 5.34
508 509 1.069703 CAGTGAACACCTGCATTCGTG 60.070 52.381 7.06 7.06 36.04 4.35
509 510 1.202639 TCAGTGAACACCTGCATTCGT 60.203 47.619 1.11 0.00 0.00 3.85
510 511 1.511850 TCAGTGAACACCTGCATTCG 58.488 50.000 1.11 0.00 0.00 3.34
511 512 4.002982 TGTATCAGTGAACACCTGCATTC 58.997 43.478 0.00 0.00 0.00 2.67
554 1573 3.517100 AGCAGGTAAGAGAGAAGATGCAA 59.483 43.478 0.00 0.00 34.93 4.08
571 1590 3.037549 AGGTAGAGGATCAAAGAGCAGG 58.962 50.000 0.00 0.00 37.82 4.85
591 1610 0.984961 TGGCTCCTCCCAGGATCAAG 60.985 60.000 0.00 0.00 44.81 3.02
607 1626 3.941483 AGATATTGTGCAGTGTAGTTGGC 59.059 43.478 0.00 0.00 0.00 4.52
609 1628 9.750125 TCTATTAGATATTGTGCAGTGTAGTTG 57.250 33.333 0.00 0.00 0.00 3.16
616 1635 6.715280 CCCCATCTATTAGATATTGTGCAGT 58.285 40.000 5.88 0.00 32.12 4.40
617 1636 5.587844 GCCCCATCTATTAGATATTGTGCAG 59.412 44.000 5.88 0.00 32.12 4.41
622 1641 5.715439 TGGGCCCCATCTATTAGATATTG 57.285 43.478 22.27 0.00 32.12 1.90
645 1664 7.287061 TCTTTCAACCCTCAAATTCAACTAGA 58.713 34.615 0.00 0.00 0.00 2.43
647 1666 8.359642 CAATCTTTCAACCCTCAAATTCAACTA 58.640 33.333 0.00 0.00 0.00 2.24
659 1678 4.479158 TGCTAAACCAATCTTTCAACCCT 58.521 39.130 0.00 0.00 0.00 4.34
693 1712 2.097142 ACGGTAGAACGTATGTGCTCTC 59.903 50.000 0.00 0.00 46.58 3.20
701 1720 3.561725 GCTACACCTACGGTAGAACGTAT 59.438 47.826 16.59 0.00 46.77 3.06
704 1723 1.739466 TGCTACACCTACGGTAGAACG 59.261 52.381 16.59 6.79 40.49 3.95
752 1771 4.142513 GCACCTCCAGCTAAAGATTTCAAG 60.143 45.833 0.00 0.00 0.00 3.02
755 1774 2.685388 GGCACCTCCAGCTAAAGATTTC 59.315 50.000 0.00 0.00 34.01 2.17
756 1775 2.310052 AGGCACCTCCAGCTAAAGATTT 59.690 45.455 0.00 0.00 37.29 2.17
757 1776 1.918957 AGGCACCTCCAGCTAAAGATT 59.081 47.619 0.00 0.00 37.29 2.40
758 1777 1.589414 AGGCACCTCCAGCTAAAGAT 58.411 50.000 0.00 0.00 37.29 2.40
759 1778 2.111384 CTAGGCACCTCCAGCTAAAGA 58.889 52.381 0.00 0.00 37.29 2.52
760 1779 2.111384 TCTAGGCACCTCCAGCTAAAG 58.889 52.381 0.00 0.00 37.29 1.85
796 1826 3.391382 GCGCCACCTACCCACTCT 61.391 66.667 0.00 0.00 0.00 3.24
977 2047 0.889306 CGTTTCCTCGTCTTCCTCCT 59.111 55.000 0.00 0.00 0.00 3.69
1329 2399 7.496591 TGAAATGAACTACTAACCTTGTCGTTT 59.503 33.333 0.00 0.00 0.00 3.60
1384 2642 5.646606 GAGTTGAGACTGAGAGATGTAACC 58.353 45.833 0.00 0.00 35.88 2.85
1438 3081 1.817099 CTGTCTTGAGGATGCCGGC 60.817 63.158 22.73 22.73 0.00 6.13
1457 3100 0.040942 AGCTCTCTCCTCCTGCTTCA 59.959 55.000 0.00 0.00 0.00 3.02
1737 3397 4.640690 AGCTCGTCCACCCCAGGT 62.641 66.667 0.00 0.00 35.62 4.00
1797 3457 3.975168 AATTAGTTACTGGTGACCGCT 57.025 42.857 0.00 0.00 0.00 5.52
1922 3856 5.051816 CCGACCAAGTAGTAACAGTTCAAA 58.948 41.667 0.00 0.00 0.00 2.69
1939 3873 1.448922 CGCAAAAAGAACCCCGACCA 61.449 55.000 0.00 0.00 0.00 4.02
1947 3884 4.226761 CCACTAACCATCGCAAAAAGAAC 58.773 43.478 0.00 0.00 0.00 3.01
1993 3930 0.179150 GATCGAAGAGAGTGCACGCT 60.179 55.000 23.81 23.81 43.63 5.07
2024 3962 6.398935 GCTTCAATTTATTCACGAAACAGCAC 60.399 38.462 0.00 0.00 0.00 4.40
2162 4120 4.674281 AATCTAGTCCTTCGGAATCACC 57.326 45.455 0.00 0.00 31.38 4.02
2169 4127 4.443034 CCCTGGTAAAATCTAGTCCTTCGG 60.443 50.000 0.00 0.00 0.00 4.30
2171 4129 4.164413 AGCCCTGGTAAAATCTAGTCCTTC 59.836 45.833 0.00 0.00 0.00 3.46
2267 4226 4.445718 CGATCCATGTTAATTCTCACGGAG 59.554 45.833 4.45 0.00 0.00 4.63
2275 4234 6.195165 GTGCTTTCTCGATCCATGTTAATTC 58.805 40.000 0.00 0.00 0.00 2.17
2282 4241 2.028420 TGGTGCTTTCTCGATCCATG 57.972 50.000 0.00 0.00 0.00 3.66
2300 4259 5.788531 GCACTACACGCATAACTTAGTTTTG 59.211 40.000 1.94 7.06 0.00 2.44
2326 4285 6.303839 AGTAAATAAAAACAGAGGGAGCACA 58.696 36.000 0.00 0.00 0.00 4.57
2329 4288 6.403746 GCAGAGTAAATAAAAACAGAGGGAGC 60.404 42.308 0.00 0.00 0.00 4.70
2545 4506 3.869246 ACTCCGCATATTAACTTTGGTCG 59.131 43.478 0.00 0.00 0.00 4.79
2557 4518 6.204108 CCTCCGTTTTAATTTACTCCGCATAT 59.796 38.462 0.00 0.00 0.00 1.78
2563 4524 5.494724 ACTCCCTCCGTTTTAATTTACTCC 58.505 41.667 0.00 0.00 0.00 3.85
2572 4533 7.781693 ACTAGTTATGATACTCCCTCCGTTTTA 59.218 37.037 0.00 0.00 0.00 1.52
2611 4572 7.676004 TGTCACCTCATCAAAATCACTTAGTA 58.324 34.615 0.00 0.00 0.00 1.82
2618 4579 8.812513 AATTCTATGTCACCTCATCAAAATCA 57.187 30.769 0.00 0.00 0.00 2.57
2685 4648 4.583489 GTCTTACATTATGAGACGGAGGGA 59.417 45.833 0.00 0.00 34.53 4.20
2686 4649 4.872664 GTCTTACATTATGAGACGGAGGG 58.127 47.826 0.00 0.00 34.53 4.30
2692 4655 7.688578 GTCAAAAAGCGTCTTACATTATGAGAC 59.311 37.037 0.00 1.64 39.92 3.36
2693 4656 7.386573 TGTCAAAAAGCGTCTTACATTATGAGA 59.613 33.333 0.00 0.00 0.00 3.27
2694 4657 7.518161 TGTCAAAAAGCGTCTTACATTATGAG 58.482 34.615 0.00 0.00 0.00 2.90
2695 4658 7.428282 TGTCAAAAAGCGTCTTACATTATGA 57.572 32.000 0.00 0.00 0.00 2.15
2696 4659 8.673626 AATGTCAAAAAGCGTCTTACATTATG 57.326 30.769 12.58 0.00 35.08 1.90
2697 4660 9.988350 CTAATGTCAAAAAGCGTCTTACATTAT 57.012 29.630 16.79 5.35 37.57 1.28
2698 4661 8.995220 ACTAATGTCAAAAAGCGTCTTACATTA 58.005 29.630 16.18 16.18 37.31 1.90
2699 4662 7.803189 CACTAATGTCAAAAAGCGTCTTACATT 59.197 33.333 15.86 15.86 38.96 2.71
2700 4663 7.041372 ACACTAATGTCAAAAAGCGTCTTACAT 60.041 33.333 0.00 0.00 31.55 2.29
2701 4664 6.259167 ACACTAATGTCAAAAAGCGTCTTACA 59.741 34.615 0.00 0.00 31.55 2.41
2702 4665 6.656003 ACACTAATGTCAAAAAGCGTCTTAC 58.344 36.000 0.00 0.00 31.55 2.34
2703 4666 6.854496 ACACTAATGTCAAAAAGCGTCTTA 57.146 33.333 0.00 0.00 31.55 2.10
2704 4667 5.751243 ACACTAATGTCAAAAAGCGTCTT 57.249 34.783 0.00 0.00 31.55 3.01
2705 4668 5.989777 ACTACACTAATGTCAAAAAGCGTCT 59.010 36.000 0.00 0.00 40.48 4.18
2706 4669 6.071463 CACTACACTAATGTCAAAAAGCGTC 58.929 40.000 0.00 0.00 40.48 5.19
2707 4670 5.526111 ACACTACACTAATGTCAAAAAGCGT 59.474 36.000 0.00 0.00 40.48 5.07
2708 4671 5.985781 ACACTACACTAATGTCAAAAAGCG 58.014 37.500 0.00 0.00 40.48 4.68
2734 4697 8.343168 TCCGTCCAATAATGTAAGATGTTTTT 57.657 30.769 0.00 0.00 0.00 1.94
2735 4698 7.067008 CCTCCGTCCAATAATGTAAGATGTTTT 59.933 37.037 0.00 0.00 0.00 2.43
2736 4699 6.542370 CCTCCGTCCAATAATGTAAGATGTTT 59.458 38.462 0.00 0.00 0.00 2.83
2737 4700 6.055588 CCTCCGTCCAATAATGTAAGATGTT 58.944 40.000 0.00 0.00 0.00 2.71
2738 4701 5.454755 CCCTCCGTCCAATAATGTAAGATGT 60.455 44.000 0.00 0.00 0.00 3.06
2739 4702 4.997395 CCCTCCGTCCAATAATGTAAGATG 59.003 45.833 0.00 0.00 0.00 2.90
2740 4703 4.905456 TCCCTCCGTCCAATAATGTAAGAT 59.095 41.667 0.00 0.00 0.00 2.40
2741 4704 4.291792 TCCCTCCGTCCAATAATGTAAGA 58.708 43.478 0.00 0.00 0.00 2.10
2742 4705 4.101119 ACTCCCTCCGTCCAATAATGTAAG 59.899 45.833 0.00 0.00 0.00 2.34
2743 4706 4.035112 ACTCCCTCCGTCCAATAATGTAA 58.965 43.478 0.00 0.00 0.00 2.41
2744 4707 3.649843 ACTCCCTCCGTCCAATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
2745 4708 2.478292 ACTCCCTCCGTCCAATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
2746 4709 3.386726 TGTACTCCCTCCGTCCAATAATG 59.613 47.826 0.00 0.00 0.00 1.90
2747 4710 3.387050 GTGTACTCCCTCCGTCCAATAAT 59.613 47.826 0.00 0.00 0.00 1.28
2748 4711 2.762327 GTGTACTCCCTCCGTCCAATAA 59.238 50.000 0.00 0.00 0.00 1.40
2749 4712 2.024655 AGTGTACTCCCTCCGTCCAATA 60.025 50.000 0.00 0.00 0.00 1.90
2750 4713 1.192428 GTGTACTCCCTCCGTCCAAT 58.808 55.000 0.00 0.00 0.00 3.16
2751 4714 0.113776 AGTGTACTCCCTCCGTCCAA 59.886 55.000 0.00 0.00 0.00 3.53
2752 4715 0.994247 TAGTGTACTCCCTCCGTCCA 59.006 55.000 0.00 0.00 0.00 4.02
2753 4716 1.064832 ACTAGTGTACTCCCTCCGTCC 60.065 57.143 0.00 0.00 0.00 4.79
2754 4717 2.416680 ACTAGTGTACTCCCTCCGTC 57.583 55.000 0.00 0.00 0.00 4.79
2755 4718 5.309020 TCATATACTAGTGTACTCCCTCCGT 59.691 44.000 5.39 0.00 0.00 4.69
2756 4719 5.802465 TCATATACTAGTGTACTCCCTCCG 58.198 45.833 5.39 0.00 0.00 4.63
2757 4720 8.653036 AAATCATATACTAGTGTACTCCCTCC 57.347 38.462 5.39 0.00 0.00 4.30
2790 4753 4.876125 AGACATACACTTGTGTCACTCAG 58.124 43.478 9.85 3.07 44.29 3.35
2791 4754 4.937201 AGACATACACTTGTGTCACTCA 57.063 40.909 9.85 0.00 44.29 3.41
2792 4755 4.084328 GCAAGACATACACTTGTGTCACTC 60.084 45.833 9.85 3.64 44.29 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.