Multiple sequence alignment - TraesCS7A01G033500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G033500 chr7A 100.000 6325 0 0 1 6325 14729462 14735786 0.000000e+00 11681
1 TraesCS7A01G033500 chr7A 94.474 3348 110 25 571 3894 5184826 5181530 0.000000e+00 5088
2 TraesCS7A01G033500 chr7A 97.809 913 20 0 4834 5746 5180580 5179668 0.000000e+00 1576
3 TraesCS7A01G033500 chr7A 94.432 880 47 1 3894 4771 5181469 5180590 0.000000e+00 1352
4 TraesCS7A01G033500 chr7A 97.596 208 5 0 1 208 733265800 733265593 2.170000e-94 357
5 TraesCS7A01G033500 chr7A 96.682 211 7 0 1 211 710491258 710491048 1.010000e-92 351
6 TraesCS7A01G033500 chr7A 83.429 175 10 9 534 689 56162582 56162756 1.840000e-30 145
7 TraesCS7A01G033500 chr4A 93.247 5168 245 44 567 5644 719169257 719164104 0.000000e+00 7515
8 TraesCS7A01G033500 chr4A 97.596 208 5 0 1 208 690223317 690223524 2.170000e-94 357
9 TraesCS7A01G033500 chr7D 95.021 3394 129 19 519 3894 15828963 15832334 0.000000e+00 5295
10 TraesCS7A01G033500 chr7D 96.168 1879 42 11 3894 5748 15832393 15834265 0.000000e+00 3044
11 TraesCS7A01G033500 chr7D 92.139 547 39 4 5776 6319 552277981 552278526 0.000000e+00 769
12 TraesCS7A01G033500 chr1D 93.002 543 35 3 5779 6319 446756082 446756623 0.000000e+00 789
13 TraesCS7A01G033500 chr1D 93.135 539 34 3 5779 6315 11804390 11803853 0.000000e+00 787
14 TraesCS7A01G033500 chr1D 92.081 543 38 5 5779 6319 491721563 491722102 0.000000e+00 760
15 TraesCS7A01G033500 chr3D 92.818 543 36 3 5779 6319 581095724 581096265 0.000000e+00 784
16 TraesCS7A01G033500 chr2D 92.818 543 36 3 5779 6319 27080371 27080912 0.000000e+00 784
17 TraesCS7A01G033500 chr6B 92.139 547 36 6 5776 6319 663016020 663015478 0.000000e+00 765
18 TraesCS7A01G033500 chr6B 88.031 259 31 0 3522 3780 7939559 7939301 2.210000e-79 307
19 TraesCS7A01G033500 chr6B 79.747 395 43 23 424 784 640316214 640315823 1.050000e-62 252
20 TraesCS7A01G033500 chr6B 83.824 136 22 0 4034 4169 7938894 7938759 5.150000e-26 130
21 TraesCS7A01G033500 chrUn 92.081 543 39 4 5779 6319 62534286 62534826 0.000000e+00 761
22 TraesCS7A01G033500 chrUn 91.897 543 41 3 5779 6319 35558810 35558269 0.000000e+00 756
23 TraesCS7A01G033500 chrUn 97.115 208 6 0 1 208 62657702 62657909 1.010000e-92 351
24 TraesCS7A01G033500 chr2B 97.196 214 5 1 1 213 800099250 800099463 1.680000e-95 361
25 TraesCS7A01G033500 chr6D 79.612 515 92 12 3271 3780 4633411 4633917 2.170000e-94 357
26 TraesCS7A01G033500 chr6D 80.272 147 27 2 4025 4169 4634268 4634414 6.700000e-20 110
27 TraesCS7A01G033500 chr5A 97.596 208 5 0 1 208 45711724 45711517 2.170000e-94 357
28 TraesCS7A01G033500 chr4B 97.115 208 6 0 1 208 181808233 181808026 1.010000e-92 351
29 TraesCS7A01G033500 chr1A 97.115 208 6 0 1 208 304794039 304793832 1.010000e-92 351
30 TraesCS7A01G033500 chr5B 95.392 217 9 1 1 217 65965840 65966055 1.690000e-90 344
31 TraesCS7A01G033500 chr6A 79.029 515 95 12 3271 3780 2955881 2956387 2.180000e-89 340
32 TraesCS7A01G033500 chr6A 82.857 140 24 0 4030 4169 2956727 2956866 6.660000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G033500 chr7A 14729462 14735786 6324 False 11681.0 11681 100.000000 1 6325 1 chr7A.!!$F1 6324
1 TraesCS7A01G033500 chr7A 5179668 5184826 5158 True 2672.0 5088 95.571667 571 5746 3 chr7A.!!$R3 5175
2 TraesCS7A01G033500 chr4A 719164104 719169257 5153 True 7515.0 7515 93.247000 567 5644 1 chr4A.!!$R1 5077
3 TraesCS7A01G033500 chr7D 15828963 15834265 5302 False 4169.5 5295 95.594500 519 5748 2 chr7D.!!$F2 5229
4 TraesCS7A01G033500 chr7D 552277981 552278526 545 False 769.0 769 92.139000 5776 6319 1 chr7D.!!$F1 543
5 TraesCS7A01G033500 chr1D 446756082 446756623 541 False 789.0 789 93.002000 5779 6319 1 chr1D.!!$F1 540
6 TraesCS7A01G033500 chr1D 11803853 11804390 537 True 787.0 787 93.135000 5779 6315 1 chr1D.!!$R1 536
7 TraesCS7A01G033500 chr1D 491721563 491722102 539 False 760.0 760 92.081000 5779 6319 1 chr1D.!!$F2 540
8 TraesCS7A01G033500 chr3D 581095724 581096265 541 False 784.0 784 92.818000 5779 6319 1 chr3D.!!$F1 540
9 TraesCS7A01G033500 chr2D 27080371 27080912 541 False 784.0 784 92.818000 5779 6319 1 chr2D.!!$F1 540
10 TraesCS7A01G033500 chr6B 663015478 663016020 542 True 765.0 765 92.139000 5776 6319 1 chr6B.!!$R2 543
11 TraesCS7A01G033500 chr6B 7938759 7939559 800 True 218.5 307 85.927500 3522 4169 2 chr6B.!!$R3 647
12 TraesCS7A01G033500 chrUn 62534286 62534826 540 False 761.0 761 92.081000 5779 6319 1 chrUn.!!$F1 540
13 TraesCS7A01G033500 chrUn 35558269 35558810 541 True 756.0 756 91.897000 5779 6319 1 chrUn.!!$R1 540
14 TraesCS7A01G033500 chr6D 4633411 4634414 1003 False 233.5 357 79.942000 3271 4169 2 chr6D.!!$F1 898
15 TraesCS7A01G033500 chr6A 2955881 2956866 985 False 233.0 340 80.943000 3271 4169 2 chr6A.!!$F1 898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.179004 TCCTTGAACACATGCGGGTT 60.179 50.000 0.00 0.0 0.00 4.11 F
249 250 0.179124 CTCGCAGTAGGAGGAAGCAC 60.179 60.000 0.00 0.0 0.00 4.40 F
251 252 0.179124 CGCAGTAGGAGGAAGCACTC 60.179 60.000 0.00 0.0 36.76 3.51 F
492 493 0.250989 CCTTGTAAAACCGGGGAGCA 60.251 55.000 6.32 0.0 0.00 4.26 F
585 586 0.465460 ATCACACCACACCACACCAC 60.465 55.000 0.00 0.0 0.00 4.16 F
1842 1896 1.217244 GGGAAAGCGGTCGAAGCTA 59.783 57.895 15.71 0.0 45.31 3.32 F
2960 3030 1.273048 ACATGTAGTACGGCGGTTTGA 59.727 47.619 13.24 0.0 0.00 2.69 F
3404 3482 1.135083 CGCTTCGAGGAAGAGGCTTTA 60.135 52.381 9.43 0.0 41.71 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1644 1698 1.213013 CTTCTCCGTCCTGGTCACG 59.787 63.158 1.24 1.24 39.52 4.35 R
2153 2208 2.492010 GGTTTGGCTTTTCCCCTTCCTA 60.492 50.000 0.00 0.00 0.00 2.94 R
2353 2417 6.515272 AGCCCAATAAAAATACAGACACAG 57.485 37.500 0.00 0.00 0.00 3.66 R
2847 2917 9.965824 CAAACCAAATAAACATCTAACAGAACT 57.034 29.630 0.00 0.00 0.00 3.01 R
2937 3007 2.042686 ACCGCCGTACTACATGTAGA 57.957 50.000 34.16 17.73 36.97 2.59 R
3364 3442 1.733402 CTCACGGCCCTCTAGCAGAG 61.733 65.000 0.00 6.28 41.96 3.35 R
4651 5129 0.039074 ATCTTATTCTCGAGGCGCCG 60.039 55.000 23.20 10.72 0.00 6.46 R
5698 6216 0.247736 CTTCACCTTCCCGTCCTCTG 59.752 60.000 0.00 0.00 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.608718 ACTAAAATATGTATTAGCCCTCTCTCT 57.391 33.333 0.00 0.00 33.39 3.10
29 30 7.489239 AAATATGTATTAGCCCTCTCTCTCC 57.511 40.000 0.00 0.00 0.00 3.71
30 31 4.757997 ATGTATTAGCCCTCTCTCTCCT 57.242 45.455 0.00 0.00 0.00 3.69
31 32 4.107127 TGTATTAGCCCTCTCTCTCCTC 57.893 50.000 0.00 0.00 0.00 3.71
32 33 3.463704 TGTATTAGCCCTCTCTCTCCTCA 59.536 47.826 0.00 0.00 0.00 3.86
33 34 3.921287 ATTAGCCCTCTCTCTCCTCAT 57.079 47.619 0.00 0.00 0.00 2.90
34 35 3.697190 TTAGCCCTCTCTCTCCTCATT 57.303 47.619 0.00 0.00 0.00 2.57
35 36 2.566708 AGCCCTCTCTCTCCTCATTT 57.433 50.000 0.00 0.00 0.00 2.32
36 37 3.697190 AGCCCTCTCTCTCCTCATTTA 57.303 47.619 0.00 0.00 0.00 1.40
37 38 4.000928 AGCCCTCTCTCTCCTCATTTAA 57.999 45.455 0.00 0.00 0.00 1.52
38 39 4.565817 AGCCCTCTCTCTCCTCATTTAAT 58.434 43.478 0.00 0.00 0.00 1.40
39 40 4.974501 AGCCCTCTCTCTCCTCATTTAATT 59.025 41.667 0.00 0.00 0.00 1.40
40 41 5.071653 AGCCCTCTCTCTCCTCATTTAATTC 59.928 44.000 0.00 0.00 0.00 2.17
41 42 5.744594 GCCCTCTCTCTCCTCATTTAATTCC 60.745 48.000 0.00 0.00 0.00 3.01
42 43 5.606329 CCCTCTCTCTCCTCATTTAATTCCT 59.394 44.000 0.00 0.00 0.00 3.36
43 44 6.239572 CCCTCTCTCTCCTCATTTAATTCCTC 60.240 46.154 0.00 0.00 0.00 3.71
44 45 6.554605 CCTCTCTCTCCTCATTTAATTCCTCT 59.445 42.308 0.00 0.00 0.00 3.69
45 46 7.255942 CCTCTCTCTCCTCATTTAATTCCTCTC 60.256 44.444 0.00 0.00 0.00 3.20
46 47 6.553100 TCTCTCTCCTCATTTAATTCCTCTCC 59.447 42.308 0.00 0.00 0.00 3.71
47 48 6.448202 TCTCTCCTCATTTAATTCCTCTCCT 58.552 40.000 0.00 0.00 0.00 3.69
48 49 6.905776 TCTCTCCTCATTTAATTCCTCTCCTT 59.094 38.462 0.00 0.00 0.00 3.36
49 50 6.893583 TCTCCTCATTTAATTCCTCTCCTTG 58.106 40.000 0.00 0.00 0.00 3.61
50 51 6.673978 TCTCCTCATTTAATTCCTCTCCTTGA 59.326 38.462 0.00 0.00 0.00 3.02
51 52 7.182749 TCTCCTCATTTAATTCCTCTCCTTGAA 59.817 37.037 0.00 0.00 0.00 2.69
52 53 7.112779 TCCTCATTTAATTCCTCTCCTTGAAC 58.887 38.462 0.00 0.00 0.00 3.18
53 54 6.886459 CCTCATTTAATTCCTCTCCTTGAACA 59.114 38.462 0.00 0.00 0.00 3.18
54 55 7.148171 CCTCATTTAATTCCTCTCCTTGAACAC 60.148 40.741 0.00 0.00 0.00 3.32
55 56 7.230747 TCATTTAATTCCTCTCCTTGAACACA 58.769 34.615 0.00 0.00 0.00 3.72
56 57 7.890127 TCATTTAATTCCTCTCCTTGAACACAT 59.110 33.333 0.00 0.00 0.00 3.21
57 58 7.452880 TTTAATTCCTCTCCTTGAACACATG 57.547 36.000 0.00 0.00 0.00 3.21
58 59 2.479566 TCCTCTCCTTGAACACATGC 57.520 50.000 0.00 0.00 0.00 4.06
59 60 1.081892 CCTCTCCTTGAACACATGCG 58.918 55.000 0.00 0.00 0.00 4.73
60 61 1.081892 CTCTCCTTGAACACATGCGG 58.918 55.000 0.00 0.00 0.00 5.69
61 62 0.321564 TCTCCTTGAACACATGCGGG 60.322 55.000 0.00 0.00 0.00 6.13
62 63 0.606401 CTCCTTGAACACATGCGGGT 60.606 55.000 0.00 0.00 0.00 5.28
63 64 0.179004 TCCTTGAACACATGCGGGTT 60.179 50.000 0.00 0.00 0.00 4.11
64 65 0.673437 CCTTGAACACATGCGGGTTT 59.327 50.000 0.00 0.00 0.00 3.27
65 66 1.068434 CCTTGAACACATGCGGGTTTT 59.932 47.619 0.00 0.00 0.00 2.43
66 67 2.294791 CCTTGAACACATGCGGGTTTTA 59.705 45.455 0.00 0.00 0.00 1.52
67 68 3.564511 CTTGAACACATGCGGGTTTTAG 58.435 45.455 0.00 0.00 0.00 1.85
68 69 2.852449 TGAACACATGCGGGTTTTAGA 58.148 42.857 0.00 0.00 0.00 2.10
69 70 3.417101 TGAACACATGCGGGTTTTAGAT 58.583 40.909 0.00 0.00 0.00 1.98
70 71 3.823873 TGAACACATGCGGGTTTTAGATT 59.176 39.130 0.00 0.00 0.00 2.40
71 72 3.848272 ACACATGCGGGTTTTAGATTG 57.152 42.857 0.00 0.00 0.00 2.67
72 73 2.491693 ACACATGCGGGTTTTAGATTGG 59.508 45.455 0.00 0.00 0.00 3.16
73 74 2.752354 CACATGCGGGTTTTAGATTGGA 59.248 45.455 0.00 0.00 0.00 3.53
74 75 3.016736 ACATGCGGGTTTTAGATTGGAG 58.983 45.455 0.00 0.00 0.00 3.86
75 76 2.122783 TGCGGGTTTTAGATTGGAGG 57.877 50.000 0.00 0.00 0.00 4.30
76 77 1.340600 TGCGGGTTTTAGATTGGAGGG 60.341 52.381 0.00 0.00 0.00 4.30
77 78 1.340697 GCGGGTTTTAGATTGGAGGGT 60.341 52.381 0.00 0.00 0.00 4.34
78 79 2.882643 GCGGGTTTTAGATTGGAGGGTT 60.883 50.000 0.00 0.00 0.00 4.11
79 80 3.427573 CGGGTTTTAGATTGGAGGGTTT 58.572 45.455 0.00 0.00 0.00 3.27
80 81 3.192633 CGGGTTTTAGATTGGAGGGTTTG 59.807 47.826 0.00 0.00 0.00 2.93
81 82 3.513912 GGGTTTTAGATTGGAGGGTTTGG 59.486 47.826 0.00 0.00 0.00 3.28
82 83 4.412843 GGTTTTAGATTGGAGGGTTTGGA 58.587 43.478 0.00 0.00 0.00 3.53
83 84 4.462834 GGTTTTAGATTGGAGGGTTTGGAG 59.537 45.833 0.00 0.00 0.00 3.86
84 85 4.316025 TTTAGATTGGAGGGTTTGGAGG 57.684 45.455 0.00 0.00 0.00 4.30
85 86 2.059756 AGATTGGAGGGTTTGGAGGA 57.940 50.000 0.00 0.00 0.00 3.71
86 87 2.577970 AGATTGGAGGGTTTGGAGGAT 58.422 47.619 0.00 0.00 0.00 3.24
87 88 3.747852 AGATTGGAGGGTTTGGAGGATA 58.252 45.455 0.00 0.00 0.00 2.59
88 89 4.119155 AGATTGGAGGGTTTGGAGGATAA 58.881 43.478 0.00 0.00 0.00 1.75
89 90 4.733988 AGATTGGAGGGTTTGGAGGATAAT 59.266 41.667 0.00 0.00 0.00 1.28
90 91 5.917087 AGATTGGAGGGTTTGGAGGATAATA 59.083 40.000 0.00 0.00 0.00 0.98
91 92 6.392842 AGATTGGAGGGTTTGGAGGATAATAA 59.607 38.462 0.00 0.00 0.00 1.40
92 93 6.410222 TTGGAGGGTTTGGAGGATAATAAA 57.590 37.500 0.00 0.00 0.00 1.40
93 94 6.606241 TGGAGGGTTTGGAGGATAATAAAT 57.394 37.500 0.00 0.00 0.00 1.40
94 95 6.372931 TGGAGGGTTTGGAGGATAATAAATG 58.627 40.000 0.00 0.00 0.00 2.32
95 96 5.243954 GGAGGGTTTGGAGGATAATAAATGC 59.756 44.000 0.00 0.00 0.00 3.56
96 97 6.030727 AGGGTTTGGAGGATAATAAATGCT 57.969 37.500 0.00 0.00 0.00 3.79
97 98 6.071320 AGGGTTTGGAGGATAATAAATGCTC 58.929 40.000 0.00 0.00 36.02 4.26
98 99 5.833131 GGGTTTGGAGGATAATAAATGCTCA 59.167 40.000 8.48 0.00 38.10 4.26
99 100 6.323739 GGGTTTGGAGGATAATAAATGCTCAA 59.676 38.462 8.48 0.00 38.10 3.02
100 101 7.015584 GGGTTTGGAGGATAATAAATGCTCAAT 59.984 37.037 8.48 0.00 38.10 2.57
101 102 9.077885 GGTTTGGAGGATAATAAATGCTCAATA 57.922 33.333 8.48 0.00 38.10 1.90
104 105 9.866655 TTGGAGGATAATAAATGCTCAATAACT 57.133 29.630 8.48 0.00 38.10 2.24
105 106 9.866655 TGGAGGATAATAAATGCTCAATAACTT 57.133 29.630 8.48 0.00 38.10 2.66
118 119 9.678260 ATGCTCAATAACTTGATTTTAGTCTCT 57.322 29.630 0.00 0.00 40.52 3.10
119 120 9.507329 TGCTCAATAACTTGATTTTAGTCTCTT 57.493 29.630 0.00 0.00 40.52 2.85
137 138 7.051000 AGTCTCTTTAGTATTTGGATCCAAGC 58.949 38.462 25.69 19.18 37.24 4.01
138 139 6.823689 GTCTCTTTAGTATTTGGATCCAAGCA 59.176 38.462 25.69 14.00 37.24 3.91
139 140 7.500559 GTCTCTTTAGTATTTGGATCCAAGCAT 59.499 37.037 25.69 19.69 37.24 3.79
140 141 7.500227 TCTCTTTAGTATTTGGATCCAAGCATG 59.500 37.037 25.69 12.43 37.24 4.06
149 150 1.578215 ATCCAAGCATGGGTGAGGCT 61.578 55.000 8.36 0.00 45.93 4.58
150 151 0.913934 TCCAAGCATGGGTGAGGCTA 60.914 55.000 8.36 0.00 42.15 3.93
151 152 0.465097 CCAAGCATGGGTGAGGCTAG 60.465 60.000 0.00 0.00 42.15 3.42
152 153 1.099879 CAAGCATGGGTGAGGCTAGC 61.100 60.000 6.04 6.04 42.15 3.42
153 154 1.565390 AAGCATGGGTGAGGCTAGCA 61.565 55.000 18.24 0.00 42.15 3.49
154 155 1.077501 GCATGGGTGAGGCTAGCAA 60.078 57.895 18.24 0.00 0.00 3.91
155 156 1.099879 GCATGGGTGAGGCTAGCAAG 61.100 60.000 18.24 0.00 0.00 4.01
156 157 0.254178 CATGGGTGAGGCTAGCAAGT 59.746 55.000 18.24 0.00 0.00 3.16
157 158 0.995024 ATGGGTGAGGCTAGCAAGTT 59.005 50.000 18.24 0.00 0.00 2.66
158 159 0.771127 TGGGTGAGGCTAGCAAGTTT 59.229 50.000 18.24 0.00 0.00 2.66
159 160 1.144913 TGGGTGAGGCTAGCAAGTTTT 59.855 47.619 18.24 0.00 0.00 2.43
160 161 2.373836 TGGGTGAGGCTAGCAAGTTTTA 59.626 45.455 18.24 0.00 0.00 1.52
161 162 3.010420 GGGTGAGGCTAGCAAGTTTTAG 58.990 50.000 18.24 0.00 0.00 1.85
162 163 3.559384 GGGTGAGGCTAGCAAGTTTTAGT 60.559 47.826 18.24 0.00 0.00 2.24
163 164 3.685272 GGTGAGGCTAGCAAGTTTTAGTC 59.315 47.826 18.24 0.00 0.00 2.59
164 165 3.685272 GTGAGGCTAGCAAGTTTTAGTCC 59.315 47.826 18.24 0.00 0.00 3.85
165 166 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
166 167 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
167 168 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
168 169 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
169 170 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
170 171 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
171 172 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
172 173 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
173 174 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
174 175 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
175 176 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
176 177 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
177 178 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
178 179 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
179 180 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
180 181 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
181 182 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
182 183 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
183 184 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
189 190 8.801882 CCACTACTTTTAGTCATGGGATTAAA 57.198 34.615 0.00 0.00 36.31 1.52
190 191 9.238368 CCACTACTTTTAGTCATGGGATTAAAA 57.762 33.333 0.00 0.00 40.63 1.52
192 193 8.943002 ACTACTTTTAGTCATGGGATTAAAACG 58.057 33.333 0.00 0.00 39.09 3.60
193 194 7.754851 ACTTTTAGTCATGGGATTAAAACGT 57.245 32.000 0.00 0.00 39.09 3.99
194 195 8.851541 ACTTTTAGTCATGGGATTAAAACGTA 57.148 30.769 0.00 0.00 39.09 3.57
195 196 9.457436 ACTTTTAGTCATGGGATTAAAACGTAT 57.543 29.630 0.00 0.00 39.09 3.06
196 197 9.931210 CTTTTAGTCATGGGATTAAAACGTATC 57.069 33.333 0.00 0.00 39.09 2.24
197 198 8.441312 TTTAGTCATGGGATTAAAACGTATCC 57.559 34.615 6.54 6.54 39.70 2.59
198 199 5.996644 AGTCATGGGATTAAAACGTATCCA 58.003 37.500 15.28 4.61 41.75 3.41
199 200 6.419791 AGTCATGGGATTAAAACGTATCCAA 58.580 36.000 15.28 6.08 41.75 3.53
200 201 6.542370 AGTCATGGGATTAAAACGTATCCAAG 59.458 38.462 15.28 6.04 41.75 3.61
201 202 5.298276 TCATGGGATTAAAACGTATCCAAGC 59.702 40.000 15.28 1.36 41.75 4.01
202 203 4.590918 TGGGATTAAAACGTATCCAAGCA 58.409 39.130 15.28 3.64 41.75 3.91
203 204 4.396790 TGGGATTAAAACGTATCCAAGCAC 59.603 41.667 15.28 0.95 41.75 4.40
204 205 4.201980 GGGATTAAAACGTATCCAAGCACC 60.202 45.833 15.28 0.49 41.75 5.01
205 206 4.201980 GGATTAAAACGTATCCAAGCACCC 60.202 45.833 9.73 0.00 40.08 4.61
206 207 2.579410 AAAACGTATCCAAGCACCCT 57.421 45.000 0.00 0.00 0.00 4.34
207 208 2.109425 AAACGTATCCAAGCACCCTC 57.891 50.000 0.00 0.00 0.00 4.30
208 209 0.252197 AACGTATCCAAGCACCCTCC 59.748 55.000 0.00 0.00 0.00 4.30
209 210 0.907704 ACGTATCCAAGCACCCTCCA 60.908 55.000 0.00 0.00 0.00 3.86
210 211 0.251916 CGTATCCAAGCACCCTCCAA 59.748 55.000 0.00 0.00 0.00 3.53
211 212 1.339631 CGTATCCAAGCACCCTCCAAA 60.340 52.381 0.00 0.00 0.00 3.28
212 213 2.092323 GTATCCAAGCACCCTCCAAAC 58.908 52.381 0.00 0.00 0.00 2.93
213 214 0.482446 ATCCAAGCACCCTCCAAACA 59.518 50.000 0.00 0.00 0.00 2.83
214 215 0.467290 TCCAAGCACCCTCCAAACAC 60.467 55.000 0.00 0.00 0.00 3.32
215 216 0.754957 CCAAGCACCCTCCAAACACA 60.755 55.000 0.00 0.00 0.00 3.72
216 217 1.331214 CAAGCACCCTCCAAACACAT 58.669 50.000 0.00 0.00 0.00 3.21
217 218 1.688197 CAAGCACCCTCCAAACACATT 59.312 47.619 0.00 0.00 0.00 2.71
218 219 1.620822 AGCACCCTCCAAACACATTC 58.379 50.000 0.00 0.00 0.00 2.67
219 220 1.133513 AGCACCCTCCAAACACATTCA 60.134 47.619 0.00 0.00 0.00 2.57
220 221 1.895131 GCACCCTCCAAACACATTCAT 59.105 47.619 0.00 0.00 0.00 2.57
221 222 2.094545 GCACCCTCCAAACACATTCATC 60.095 50.000 0.00 0.00 0.00 2.92
222 223 2.493278 CACCCTCCAAACACATTCATCC 59.507 50.000 0.00 0.00 0.00 3.51
223 224 1.745087 CCCTCCAAACACATTCATCCG 59.255 52.381 0.00 0.00 0.00 4.18
224 225 2.617788 CCCTCCAAACACATTCATCCGA 60.618 50.000 0.00 0.00 0.00 4.55
225 226 3.081061 CCTCCAAACACATTCATCCGAA 58.919 45.455 0.00 0.00 35.05 4.30
226 227 3.119849 CCTCCAAACACATTCATCCGAAC 60.120 47.826 0.00 0.00 32.81 3.95
227 228 2.482336 TCCAAACACATTCATCCGAACG 59.518 45.455 0.00 0.00 32.81 3.95
228 229 2.482336 CCAAACACATTCATCCGAACGA 59.518 45.455 0.00 0.00 32.81 3.85
229 230 3.424829 CCAAACACATTCATCCGAACGAG 60.425 47.826 0.00 0.00 32.81 4.18
230 231 1.359848 ACACATTCATCCGAACGAGC 58.640 50.000 0.00 0.00 32.81 5.03
231 232 1.066858 ACACATTCATCCGAACGAGCT 60.067 47.619 0.00 0.00 32.81 4.09
232 233 1.590238 CACATTCATCCGAACGAGCTC 59.410 52.381 2.73 2.73 32.81 4.09
233 234 0.848942 CATTCATCCGAACGAGCTCG 59.151 55.000 33.45 33.45 46.33 5.03
234 235 0.872021 ATTCATCCGAACGAGCTCGC 60.872 55.000 34.83 19.07 44.43 5.03
235 236 2.202610 CATCCGAACGAGCTCGCA 60.203 61.111 34.83 14.69 44.43 5.10
236 237 2.103143 ATCCGAACGAGCTCGCAG 59.897 61.111 34.83 24.36 44.43 5.18
237 238 2.701780 ATCCGAACGAGCTCGCAGT 61.702 57.895 34.83 20.85 44.43 4.40
238 239 1.374343 ATCCGAACGAGCTCGCAGTA 61.374 55.000 34.83 17.51 44.43 2.74
239 240 1.583967 CCGAACGAGCTCGCAGTAG 60.584 63.158 34.83 20.62 44.43 2.57
240 241 1.583967 CGAACGAGCTCGCAGTAGG 60.584 63.158 34.83 14.91 44.43 3.18
241 242 1.801332 GAACGAGCTCGCAGTAGGA 59.199 57.895 34.83 0.00 44.43 2.94
242 243 0.248296 GAACGAGCTCGCAGTAGGAG 60.248 60.000 34.83 6.98 44.43 3.69
243 244 1.658686 AACGAGCTCGCAGTAGGAGG 61.659 60.000 34.83 6.20 44.43 4.30
244 245 1.820056 CGAGCTCGCAGTAGGAGGA 60.820 63.158 25.07 0.00 32.10 3.71
245 246 1.377366 CGAGCTCGCAGTAGGAGGAA 61.377 60.000 25.07 0.00 32.10 3.36
246 247 0.383949 GAGCTCGCAGTAGGAGGAAG 59.616 60.000 0.00 0.00 32.10 3.46
247 248 1.227118 GCTCGCAGTAGGAGGAAGC 60.227 63.158 0.00 0.00 32.10 3.86
248 249 1.949847 GCTCGCAGTAGGAGGAAGCA 61.950 60.000 0.00 0.00 32.10 3.91
249 250 0.179124 CTCGCAGTAGGAGGAAGCAC 60.179 60.000 0.00 0.00 0.00 4.40
250 251 0.612174 TCGCAGTAGGAGGAAGCACT 60.612 55.000 0.00 0.00 0.00 4.40
251 252 0.179124 CGCAGTAGGAGGAAGCACTC 60.179 60.000 0.00 0.00 36.76 3.51
252 253 0.898320 GCAGTAGGAGGAAGCACTCA 59.102 55.000 5.62 0.00 39.27 3.41
253 254 1.404851 GCAGTAGGAGGAAGCACTCAC 60.405 57.143 5.62 0.00 39.27 3.51
254 255 2.175202 CAGTAGGAGGAAGCACTCACT 58.825 52.381 5.62 3.52 39.27 3.41
255 256 2.564947 CAGTAGGAGGAAGCACTCACTT 59.435 50.000 5.62 0.00 39.27 3.16
256 257 3.007398 CAGTAGGAGGAAGCACTCACTTT 59.993 47.826 5.62 0.00 39.27 2.66
257 258 3.648545 AGTAGGAGGAAGCACTCACTTTT 59.351 43.478 5.62 0.00 39.27 2.27
258 259 3.133141 AGGAGGAAGCACTCACTTTTC 57.867 47.619 5.62 0.00 39.27 2.29
259 260 2.155279 GGAGGAAGCACTCACTTTTCC 58.845 52.381 5.62 0.00 39.27 3.13
260 261 2.155279 GAGGAAGCACTCACTTTTCCC 58.845 52.381 0.00 0.00 39.91 3.97
261 262 0.875059 GGAAGCACTCACTTTTCCCG 59.125 55.000 0.00 0.00 34.38 5.14
262 263 0.875059 GAAGCACTCACTTTTCCCGG 59.125 55.000 0.00 0.00 0.00 5.73
263 264 0.537371 AAGCACTCACTTTTCCCGGG 60.537 55.000 16.85 16.85 0.00 5.73
264 265 1.228154 GCACTCACTTTTCCCGGGT 60.228 57.895 22.86 0.00 0.00 5.28
265 266 0.822121 GCACTCACTTTTCCCGGGTT 60.822 55.000 22.86 0.00 0.00 4.11
266 267 1.687563 CACTCACTTTTCCCGGGTTT 58.312 50.000 22.86 0.00 0.00 3.27
267 268 2.853705 CACTCACTTTTCCCGGGTTTA 58.146 47.619 22.86 4.28 0.00 2.01
268 269 3.418047 CACTCACTTTTCCCGGGTTTAT 58.582 45.455 22.86 0.12 0.00 1.40
269 270 4.581868 CACTCACTTTTCCCGGGTTTATA 58.418 43.478 22.86 0.00 0.00 0.98
270 271 5.190677 CACTCACTTTTCCCGGGTTTATAT 58.809 41.667 22.86 0.00 0.00 0.86
271 272 6.350906 CACTCACTTTTCCCGGGTTTATATA 58.649 40.000 22.86 0.00 0.00 0.86
272 273 6.824704 CACTCACTTTTCCCGGGTTTATATAA 59.175 38.462 22.86 1.59 0.00 0.98
273 274 7.337436 CACTCACTTTTCCCGGGTTTATATAAA 59.663 37.037 22.86 8.93 0.00 1.40
274 275 7.555195 ACTCACTTTTCCCGGGTTTATATAAAG 59.445 37.037 22.86 18.99 0.00 1.85
275 276 7.631933 TCACTTTTCCCGGGTTTATATAAAGA 58.368 34.615 22.86 2.82 0.00 2.52
276 277 7.553760 TCACTTTTCCCGGGTTTATATAAAGAC 59.446 37.037 22.86 4.98 0.00 3.01
277 278 7.555195 CACTTTTCCCGGGTTTATATAAAGACT 59.445 37.037 22.86 3.22 0.00 3.24
278 279 8.771286 ACTTTTCCCGGGTTTATATAAAGACTA 58.229 33.333 22.86 0.00 0.00 2.59
279 280 9.788889 CTTTTCCCGGGTTTATATAAAGACTAT 57.211 33.333 22.86 0.00 0.00 2.12
280 281 9.563748 TTTTCCCGGGTTTATATAAAGACTATG 57.436 33.333 22.86 0.00 0.00 2.23
281 282 7.248743 TCCCGGGTTTATATAAAGACTATGG 57.751 40.000 22.86 5.43 0.00 2.74
282 283 7.018150 TCCCGGGTTTATATAAAGACTATGGA 58.982 38.462 22.86 7.38 0.00 3.41
283 284 7.681168 TCCCGGGTTTATATAAAGACTATGGAT 59.319 37.037 22.86 0.00 0.00 3.41
284 285 8.326529 CCCGGGTTTATATAAAGACTATGGATT 58.673 37.037 14.18 0.00 0.00 3.01
285 286 9.734984 CCGGGTTTATATAAAGACTATGGATTT 57.265 33.333 8.18 0.00 0.00 2.17
297 298 7.693969 AGACTATGGATTTTGTCTTTTGAGG 57.306 36.000 0.00 0.00 36.50 3.86
298 299 7.461749 AGACTATGGATTTTGTCTTTTGAGGA 58.538 34.615 0.00 0.00 36.50 3.71
299 300 7.944554 AGACTATGGATTTTGTCTTTTGAGGAA 59.055 33.333 0.00 0.00 36.50 3.36
300 301 8.477419 ACTATGGATTTTGTCTTTTGAGGAAA 57.523 30.769 0.00 0.00 0.00 3.13
301 302 8.923270 ACTATGGATTTTGTCTTTTGAGGAAAA 58.077 29.630 0.00 0.00 0.00 2.29
302 303 9.933723 CTATGGATTTTGTCTTTTGAGGAAAAT 57.066 29.630 0.00 0.00 35.79 1.82
303 304 8.837788 ATGGATTTTGTCTTTTGAGGAAAATC 57.162 30.769 0.00 0.00 41.73 2.17
304 305 8.021898 TGGATTTTGTCTTTTGAGGAAAATCT 57.978 30.769 0.00 0.00 41.90 2.40
305 306 7.927629 TGGATTTTGTCTTTTGAGGAAAATCTG 59.072 33.333 0.00 0.00 41.90 2.90
306 307 7.928167 GGATTTTGTCTTTTGAGGAAAATCTGT 59.072 33.333 0.00 0.00 41.90 3.41
307 308 9.965824 GATTTTGTCTTTTGAGGAAAATCTGTA 57.034 29.630 0.00 0.00 40.70 2.74
337 338 9.575783 TTTGTCTAACTTTACATGGAAAAACAC 57.424 29.630 4.29 0.00 0.00 3.32
338 339 8.514330 TGTCTAACTTTACATGGAAAAACACT 57.486 30.769 4.29 0.00 0.00 3.55
339 340 9.616156 TGTCTAACTTTACATGGAAAAACACTA 57.384 29.630 4.29 0.00 0.00 2.74
348 349 7.875327 ACATGGAAAAACACTAACTTACACT 57.125 32.000 0.00 0.00 0.00 3.55
349 350 8.967664 ACATGGAAAAACACTAACTTACACTA 57.032 30.769 0.00 0.00 0.00 2.74
350 351 9.569122 ACATGGAAAAACACTAACTTACACTAT 57.431 29.630 0.00 0.00 0.00 2.12
356 357 9.850198 AAAAACACTAACTTACACTATAACCCA 57.150 29.630 0.00 0.00 0.00 4.51
357 358 9.850198 AAAACACTAACTTACACTATAACCCAA 57.150 29.630 0.00 0.00 0.00 4.12
368 369 9.810870 TTACACTATAACCCAATAAAACCTTGT 57.189 29.630 0.00 0.00 0.00 3.16
370 371 9.457436 ACACTATAACCCAATAAAACCTTGTAG 57.543 33.333 0.00 0.00 0.00 2.74
371 372 8.899771 CACTATAACCCAATAAAACCTTGTAGG 58.100 37.037 0.00 0.00 42.49 3.18
386 387 6.877611 CCTTGTAGGTACAACAAAGTTCAT 57.122 37.500 12.44 0.00 40.93 2.57
387 388 6.899114 CCTTGTAGGTACAACAAAGTTCATC 58.101 40.000 12.44 0.00 40.93 2.92
388 389 6.347402 CCTTGTAGGTACAACAAAGTTCATCG 60.347 42.308 12.44 1.69 40.93 3.84
389 390 5.845103 TGTAGGTACAACAAAGTTCATCGA 58.155 37.500 0.00 0.00 32.40 3.59
390 391 5.924254 TGTAGGTACAACAAAGTTCATCGAG 59.076 40.000 0.00 0.00 32.40 4.04
391 392 5.209818 AGGTACAACAAAGTTCATCGAGA 57.790 39.130 0.00 0.00 0.00 4.04
392 393 5.230942 AGGTACAACAAAGTTCATCGAGAG 58.769 41.667 0.00 0.00 0.00 3.20
410 411 7.653767 TCGAGAGAAAAAGGATGACTTAAAC 57.346 36.000 0.00 0.00 36.03 2.01
411 412 7.442656 TCGAGAGAAAAAGGATGACTTAAACT 58.557 34.615 0.00 0.00 36.03 2.66
412 413 7.931948 TCGAGAGAAAAAGGATGACTTAAACTT 59.068 33.333 0.00 0.00 36.03 2.66
413 414 8.560374 CGAGAGAAAAAGGATGACTTAAACTTT 58.440 33.333 0.00 0.00 38.85 2.66
414 415 9.670719 GAGAGAAAAAGGATGACTTAAACTTTG 57.329 33.333 0.00 0.00 38.85 2.77
415 416 9.190317 AGAGAAAAAGGATGACTTAAACTTTGT 57.810 29.630 0.00 0.00 38.85 2.83
418 419 9.459640 GAAAAAGGATGACTTAAACTTTGTACC 57.540 33.333 0.00 0.00 38.85 3.34
419 420 8.528044 AAAAGGATGACTTAAACTTTGTACCA 57.472 30.769 0.00 0.00 38.85 3.25
420 421 8.528044 AAAGGATGACTTAAACTTTGTACCAA 57.472 30.769 0.00 0.00 38.85 3.67
421 422 8.528044 AAGGATGACTTAAACTTTGTACCAAA 57.472 30.769 0.00 0.00 37.74 3.28
422 423 8.706322 AGGATGACTTAAACTTTGTACCAAAT 57.294 30.769 0.00 0.00 0.00 2.32
423 424 9.802039 AGGATGACTTAAACTTTGTACCAAATA 57.198 29.630 0.00 0.00 0.00 1.40
452 453 6.900568 TGTTGCTGAAACATAAAAGGTTTG 57.099 33.333 0.00 0.00 43.96 2.93
453 454 6.634805 TGTTGCTGAAACATAAAAGGTTTGA 58.365 32.000 0.00 0.00 43.96 2.69
454 455 7.271511 TGTTGCTGAAACATAAAAGGTTTGAT 58.728 30.769 0.00 0.00 43.96 2.57
455 456 7.768120 TGTTGCTGAAACATAAAAGGTTTGATT 59.232 29.630 0.00 0.00 43.96 2.57
456 457 8.611757 GTTGCTGAAACATAAAAGGTTTGATTT 58.388 29.630 0.00 0.00 38.50 2.17
457 458 8.140677 TGCTGAAACATAAAAGGTTTGATTTG 57.859 30.769 0.00 0.00 38.50 2.32
458 459 7.984050 TGCTGAAACATAAAAGGTTTGATTTGA 59.016 29.630 0.00 0.00 38.50 2.69
459 460 8.825745 GCTGAAACATAAAAGGTTTGATTTGAA 58.174 29.630 0.00 0.00 38.50 2.69
469 470 8.572855 AAAGGTTTGATTTGAAACAAAATCCA 57.427 26.923 7.08 0.00 43.13 3.41
470 471 8.750515 AAGGTTTGATTTGAAACAAAATCCAT 57.249 26.923 7.08 0.00 43.13 3.41
471 472 8.156994 AGGTTTGATTTGAAACAAAATCCATG 57.843 30.769 7.08 0.00 43.13 3.66
472 473 7.229106 AGGTTTGATTTGAAACAAAATCCATGG 59.771 33.333 4.97 4.97 43.13 3.66
473 474 6.557291 TTGATTTGAAACAAAATCCATGGC 57.443 33.333 6.96 0.00 43.13 4.40
474 475 5.002516 TGATTTGAAACAAAATCCATGGCC 58.997 37.500 6.96 0.00 43.13 5.36
475 476 4.703379 TTTGAAACAAAATCCATGGCCT 57.297 36.364 6.96 0.00 0.00 5.19
476 477 4.703379 TTGAAACAAAATCCATGGCCTT 57.297 36.364 6.96 0.00 0.00 4.35
477 478 4.005487 TGAAACAAAATCCATGGCCTTG 57.995 40.909 6.96 11.68 0.00 3.61
478 479 3.390639 TGAAACAAAATCCATGGCCTTGT 59.609 39.130 16.81 12.88 0.00 3.16
479 480 4.590647 TGAAACAAAATCCATGGCCTTGTA 59.409 37.500 19.84 1.84 30.30 2.41
480 481 5.070981 TGAAACAAAATCCATGGCCTTGTAA 59.929 36.000 19.84 5.74 30.30 2.41
481 482 5.559148 AACAAAATCCATGGCCTTGTAAA 57.441 34.783 19.84 3.37 30.30 2.01
482 483 5.559148 ACAAAATCCATGGCCTTGTAAAA 57.441 34.783 18.74 1.03 0.00 1.52
483 484 5.304778 ACAAAATCCATGGCCTTGTAAAAC 58.695 37.500 18.74 0.00 0.00 2.43
484 485 4.551702 AAATCCATGGCCTTGTAAAACC 57.448 40.909 16.81 0.00 0.00 3.27
485 486 1.540267 TCCATGGCCTTGTAAAACCG 58.460 50.000 16.81 0.73 0.00 4.44
486 487 0.530288 CCATGGCCTTGTAAAACCGG 59.470 55.000 16.81 0.00 0.00 5.28
487 488 0.530288 CATGGCCTTGTAAAACCGGG 59.470 55.000 6.32 0.00 0.00 5.73
488 489 0.613572 ATGGCCTTGTAAAACCGGGG 60.614 55.000 6.32 0.00 0.00 5.73
489 490 1.075305 GGCCTTGTAAAACCGGGGA 59.925 57.895 6.32 0.00 0.00 4.81
490 491 0.963856 GGCCTTGTAAAACCGGGGAG 60.964 60.000 6.32 0.00 0.00 4.30
491 492 1.592400 GCCTTGTAAAACCGGGGAGC 61.592 60.000 6.32 0.00 0.00 4.70
492 493 0.250989 CCTTGTAAAACCGGGGAGCA 60.251 55.000 6.32 0.00 0.00 4.26
493 494 1.165270 CTTGTAAAACCGGGGAGCAG 58.835 55.000 6.32 0.00 0.00 4.24
494 495 0.250989 TTGTAAAACCGGGGAGCAGG 60.251 55.000 6.32 0.00 0.00 4.85
495 496 1.378119 GTAAAACCGGGGAGCAGGG 60.378 63.158 6.32 0.00 0.00 4.45
496 497 1.539372 TAAAACCGGGGAGCAGGGA 60.539 57.895 6.32 0.00 0.00 4.20
497 498 1.559065 TAAAACCGGGGAGCAGGGAG 61.559 60.000 6.32 0.00 0.00 4.30
506 507 1.681486 GGAGCAGGGAGCACTACCTC 61.681 65.000 0.00 0.00 40.91 3.85
507 508 0.686112 GAGCAGGGAGCACTACCTCT 60.686 60.000 0.00 0.00 40.91 3.69
508 509 0.975040 AGCAGGGAGCACTACCTCTG 60.975 60.000 0.00 0.00 40.91 3.35
509 510 0.972983 GCAGGGAGCACTACCTCTGA 60.973 60.000 0.00 0.00 40.91 3.27
510 511 1.561643 CAGGGAGCACTACCTCTGAA 58.438 55.000 0.00 0.00 40.91 3.02
511 512 1.480137 CAGGGAGCACTACCTCTGAAG 59.520 57.143 0.00 0.00 40.91 3.02
512 513 1.359474 AGGGAGCACTACCTCTGAAGA 59.641 52.381 0.00 0.00 40.91 2.87
513 514 2.180276 GGGAGCACTACCTCTGAAGAA 58.820 52.381 0.00 0.00 32.43 2.52
514 515 2.567615 GGGAGCACTACCTCTGAAGAAA 59.432 50.000 0.00 0.00 32.43 2.52
515 516 3.198853 GGGAGCACTACCTCTGAAGAAAT 59.801 47.826 0.00 0.00 32.43 2.17
516 517 4.323868 GGGAGCACTACCTCTGAAGAAATT 60.324 45.833 0.00 0.00 32.43 1.82
517 518 5.249420 GGAGCACTACCTCTGAAGAAATTT 58.751 41.667 0.00 0.00 32.43 1.82
518 519 5.352846 GGAGCACTACCTCTGAAGAAATTTC 59.647 44.000 10.33 10.33 32.43 2.17
519 520 6.120507 AGCACTACCTCTGAAGAAATTTCT 57.879 37.500 15.11 15.11 39.74 2.52
520 521 8.225908 GGAGCACTACCTCTGAAGAAATTTCTT 61.226 40.741 29.09 29.09 39.64 2.52
521 522 7.001073 AGCACTACCTCTGAAGAAATTTCTTT 58.999 34.615 29.24 17.29 46.84 2.52
522 523 7.503902 AGCACTACCTCTGAAGAAATTTCTTTT 59.496 33.333 29.24 12.86 46.84 2.27
523 524 8.784043 GCACTACCTCTGAAGAAATTTCTTTTA 58.216 33.333 29.24 21.01 46.84 1.52
525 526 9.286170 ACTACCTCTGAAGAAATTTCTTTTACC 57.714 33.333 29.24 18.82 46.84 2.85
526 527 9.284968 CTACCTCTGAAGAAATTTCTTTTACCA 57.715 33.333 29.24 21.67 46.84 3.25
527 528 7.941919 ACCTCTGAAGAAATTTCTTTTACCAC 58.058 34.615 29.24 17.91 46.84 4.16
528 529 7.780271 ACCTCTGAAGAAATTTCTTTTACCACT 59.220 33.333 29.24 9.36 46.84 4.00
529 530 8.293157 CCTCTGAAGAAATTTCTTTTACCACTC 58.707 37.037 29.24 17.04 46.84 3.51
530 531 8.980481 TCTGAAGAAATTTCTTTTACCACTCT 57.020 30.769 29.24 7.98 46.84 3.24
540 541 7.463961 TTCTTTTACCACTCTACTAGTCCAG 57.536 40.000 0.00 0.00 35.76 3.86
565 566 3.181454 ACGGTGAAAAATCCACTCTCACT 60.181 43.478 0.00 0.00 37.23 3.41
566 567 4.039973 ACGGTGAAAAATCCACTCTCACTA 59.960 41.667 0.00 0.00 37.23 2.74
573 574 4.744795 AATCCACTCTCACTATCACACC 57.255 45.455 0.00 0.00 0.00 4.16
574 575 3.169512 TCCACTCTCACTATCACACCA 57.830 47.619 0.00 0.00 0.00 4.17
578 579 2.563179 ACTCTCACTATCACACCACACC 59.437 50.000 0.00 0.00 0.00 4.16
579 580 2.562738 CTCTCACTATCACACCACACCA 59.437 50.000 0.00 0.00 0.00 4.17
583 584 1.071699 ACTATCACACCACACCACACC 59.928 52.381 0.00 0.00 0.00 4.16
584 585 1.071542 CTATCACACCACACCACACCA 59.928 52.381 0.00 0.00 0.00 4.17
585 586 0.465460 ATCACACCACACCACACCAC 60.465 55.000 0.00 0.00 0.00 4.16
586 587 1.377856 CACACCACACCACACCACA 60.378 57.895 0.00 0.00 0.00 4.17
934 973 3.058224 CCACCAAAGGTTAGAGCTTTTCG 60.058 47.826 2.65 0.19 42.60 3.46
935 974 3.813166 CACCAAAGGTTAGAGCTTTTCGA 59.187 43.478 2.65 0.00 42.60 3.71
937 976 4.065789 CCAAAGGTTAGAGCTTTTCGAGT 58.934 43.478 2.65 0.00 42.60 4.18
938 977 4.515567 CCAAAGGTTAGAGCTTTTCGAGTT 59.484 41.667 2.65 0.00 42.60 3.01
940 979 6.459710 CCAAAGGTTAGAGCTTTTCGAGTTTT 60.460 38.462 2.65 0.00 42.60 2.43
941 980 5.674933 AGGTTAGAGCTTTTCGAGTTTTG 57.325 39.130 0.00 0.00 0.00 2.44
942 981 4.515567 AGGTTAGAGCTTTTCGAGTTTTGG 59.484 41.667 0.00 0.00 0.00 3.28
943 982 4.275196 GGTTAGAGCTTTTCGAGTTTTGGT 59.725 41.667 0.00 0.00 0.00 3.67
944 983 5.220989 GGTTAGAGCTTTTCGAGTTTTGGTT 60.221 40.000 0.00 0.00 0.00 3.67
945 984 4.983671 AGAGCTTTTCGAGTTTTGGTTT 57.016 36.364 0.00 0.00 0.00 3.27
946 985 4.672409 AGAGCTTTTCGAGTTTTGGTTTG 58.328 39.130 0.00 0.00 0.00 2.93
947 986 3.186909 AGCTTTTCGAGTTTTGGTTTGC 58.813 40.909 0.00 0.00 0.00 3.68
948 987 2.034926 GCTTTTCGAGTTTTGGTTTGCG 60.035 45.455 0.00 0.00 0.00 4.85
949 988 1.551145 TTTCGAGTTTTGGTTTGCGC 58.449 45.000 0.00 0.00 0.00 6.09
1502 1556 2.209064 GAGTCTGCGCCGAGTTACCA 62.209 60.000 10.66 0.00 0.00 3.25
1644 1698 4.373116 TCGGAGCAGTTCGTGGCC 62.373 66.667 0.00 0.00 0.00 5.36
1842 1896 1.217244 GGGAAAGCGGTCGAAGCTA 59.783 57.895 15.71 0.00 45.31 3.32
1851 1905 1.476477 GGTCGAAGCTAGGGAAGAGT 58.524 55.000 0.00 0.00 0.00 3.24
2031 2085 2.620108 GCCTCCTCAAAATCTGAAGCCT 60.620 50.000 0.00 0.00 32.17 4.58
2046 2100 5.036117 TGAAGCCTGGAAGATATTGGTAC 57.964 43.478 0.00 0.00 34.07 3.34
2153 2208 5.731957 AATAACCCGCCATTTACACTTTT 57.268 34.783 0.00 0.00 0.00 2.27
2818 2888 4.227300 ACCATATTTAAGCAGGTCAGACCA 59.773 41.667 22.31 0.00 41.95 4.02
2826 2896 2.107204 AGCAGGTCAGACCATGTTCTTT 59.893 45.455 22.31 0.00 41.95 2.52
2879 2949 9.758651 GTTAGATGTTTATTTGGTTTGGACTTT 57.241 29.630 0.00 0.00 0.00 2.66
2928 2998 7.798596 ACTATTGATGGAAGTTGATTGCTAG 57.201 36.000 0.00 0.00 0.00 3.42
2929 2999 7.341805 ACTATTGATGGAAGTTGATTGCTAGT 58.658 34.615 0.00 0.00 0.00 2.57
2937 3007 6.321181 TGGAAGTTGATTGCTAGTGTTTTTCT 59.679 34.615 0.00 0.00 0.00 2.52
2951 3021 9.275231 CTAGTGTTTTTCTCTACATGTAGTACG 57.725 37.037 27.83 18.56 34.84 3.67
2960 3030 1.273048 ACATGTAGTACGGCGGTTTGA 59.727 47.619 13.24 0.00 0.00 2.69
3069 3140 3.873952 GGTACATTCTTCTGCAAGCTAGG 59.126 47.826 0.00 0.00 0.00 3.02
3094 3165 9.317827 GGGGGTATTTATACATTAGTCTAGTCA 57.682 37.037 2.61 0.00 34.98 3.41
3364 3442 3.751518 ACATGTTCAAGTACCTTGGGAC 58.248 45.455 0.00 0.00 41.33 4.46
3404 3482 1.135083 CGCTTCGAGGAAGAGGCTTTA 60.135 52.381 9.43 0.00 41.71 1.85
3411 3489 4.519730 TCGAGGAAGAGGCTTTAGCTATAC 59.480 45.833 0.00 0.00 41.70 1.47
3436 3514 2.887151 AACCCAAACTCAGAGGATGG 57.113 50.000 14.21 14.21 0.00 3.51
3479 3557 8.349568 ACAAGGAAACTAATATTTCTTCCACC 57.650 34.615 18.08 5.98 42.68 4.61
3544 3624 6.507958 TTTTATGCAGATGGAAACGAATCA 57.492 33.333 0.00 0.00 0.00 2.57
3734 3814 7.527457 AGCAACATATAAAAGAAAGGACGAAC 58.473 34.615 0.00 0.00 0.00 3.95
3858 4196 6.371548 TGTTCACAGCCTGTATTACAAAGATC 59.628 38.462 0.00 0.00 0.00 2.75
3864 4202 6.707608 CAGCCTGTATTACAAAGATCATGCTA 59.292 38.462 0.00 0.00 0.00 3.49
4227 4702 6.038714 CACAAAACAAGTAAGCTCTCTTCCTT 59.961 38.462 0.00 0.00 29.84 3.36
4390 4868 7.338449 GCCACTGTAATTTTTCCCTACTTCATA 59.662 37.037 0.00 0.00 0.00 2.15
4419 4897 2.939103 CAGTATGTAGGTTGCCTGCTTC 59.061 50.000 4.99 0.00 37.16 3.86
4757 5235 2.514726 ATGGTCCTGTAGGGGCTAAT 57.485 50.000 0.00 0.00 40.18 1.73
4778 5256 7.645340 GCTAATAATCTGGTAAACTGCACATTG 59.355 37.037 0.00 0.00 0.00 2.82
4788 5266 0.524816 CTGCACATTGCCGATTCTGC 60.525 55.000 0.00 0.00 44.23 4.26
4832 5310 6.013842 AGAACATTTTTACAGCTTGCCTAC 57.986 37.500 0.00 0.00 0.00 3.18
4869 5347 8.608317 GCTCAATTCCTAGATGAAAACTTACTC 58.392 37.037 0.00 0.00 0.00 2.59
5578 6068 6.971184 CCAGCTTAGATTGATGTCAATTGTTC 59.029 38.462 9.42 2.48 45.72 3.18
5698 6216 1.209275 CGCCGATCCGACAGATGTTC 61.209 60.000 0.00 0.00 34.42 3.18
5809 6327 0.169672 TAGCGACGACTACAAGCACC 59.830 55.000 0.00 0.00 0.00 5.01
5898 6416 0.536687 AGACAGTCGGGAAGTCGTCA 60.537 55.000 0.00 0.00 37.36 4.35
5966 6484 6.201044 CGCGGATAAAGAGTGTAGATCAAAAT 59.799 38.462 0.00 0.00 0.00 1.82
5988 6506 1.384525 TCCAACCTGAAAACACACGG 58.615 50.000 0.00 0.00 0.00 4.94
6003 6521 0.453950 CACGGACGAAGACGAACGAT 60.454 55.000 14.13 0.00 41.37 3.73
6013 6531 4.416620 GAAGACGAACGATGAACAGATCT 58.583 43.478 0.14 0.00 0.00 2.75
6042 6560 1.073763 CCACCAAAGACAGATCCACCA 59.926 52.381 0.00 0.00 0.00 4.17
6050 6568 0.891373 ACAGATCCACCAGAGACACG 59.109 55.000 0.00 0.00 0.00 4.49
6067 6585 2.044946 GACTCCACATGCCCACCC 60.045 66.667 0.00 0.00 0.00 4.61
6069 6587 2.424842 GACTCCACATGCCCACCCAA 62.425 60.000 0.00 0.00 0.00 4.12
6182 6702 2.616842 CACAAACCCTAACAAAGCTCGT 59.383 45.455 0.00 0.00 0.00 4.18
6237 6758 3.147595 CCGAGATCCACTCCGCCA 61.148 66.667 0.00 0.00 42.18 5.69
6319 6840 0.905357 GCTAGGGTTCTTGAGAGGCA 59.095 55.000 0.00 0.00 0.00 4.75
6320 6841 1.134551 GCTAGGGTTCTTGAGAGGCAG 60.135 57.143 0.00 0.00 0.00 4.85
6321 6842 2.461695 CTAGGGTTCTTGAGAGGCAGA 58.538 52.381 0.00 0.00 0.00 4.26
6322 6843 1.734655 AGGGTTCTTGAGAGGCAGAA 58.265 50.000 0.00 0.00 0.00 3.02
6323 6844 2.057922 AGGGTTCTTGAGAGGCAGAAA 58.942 47.619 0.00 0.00 0.00 2.52
6324 6845 2.646798 AGGGTTCTTGAGAGGCAGAAAT 59.353 45.455 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.737149 AGGAGAGAGAGGGCTAATACATATTTT 59.263 37.037 0.00 0.00 0.00 1.82
7 8 6.011185 TGAGGAGAGAGAGGGCTAATACATAT 60.011 42.308 0.00 0.00 0.00 1.78
8 9 5.313506 TGAGGAGAGAGAGGGCTAATACATA 59.686 44.000 0.00 0.00 0.00 2.29
10 11 3.463704 TGAGGAGAGAGAGGGCTAATACA 59.536 47.826 0.00 0.00 0.00 2.29
11 12 4.107127 TGAGGAGAGAGAGGGCTAATAC 57.893 50.000 0.00 0.00 0.00 1.89
12 13 5.346782 AATGAGGAGAGAGAGGGCTAATA 57.653 43.478 0.00 0.00 0.00 0.98
14 15 3.697190 AATGAGGAGAGAGAGGGCTAA 57.303 47.619 0.00 0.00 0.00 3.09
15 16 3.697190 AAATGAGGAGAGAGAGGGCTA 57.303 47.619 0.00 0.00 0.00 3.93
17 18 4.972751 ATTAAATGAGGAGAGAGAGGGC 57.027 45.455 0.00 0.00 0.00 5.19
18 19 5.606329 AGGAATTAAATGAGGAGAGAGAGGG 59.394 44.000 0.00 0.00 0.00 4.30
21 22 6.553100 GGAGAGGAATTAAATGAGGAGAGAGA 59.447 42.308 0.00 0.00 0.00 3.10
23 24 6.448202 AGGAGAGGAATTAAATGAGGAGAGA 58.552 40.000 0.00 0.00 0.00 3.10
24 25 6.745794 AGGAGAGGAATTAAATGAGGAGAG 57.254 41.667 0.00 0.00 0.00 3.20
25 26 6.673978 TCAAGGAGAGGAATTAAATGAGGAGA 59.326 38.462 0.00 0.00 0.00 3.71
26 27 6.893583 TCAAGGAGAGGAATTAAATGAGGAG 58.106 40.000 0.00 0.00 0.00 3.69
27 28 6.891306 TCAAGGAGAGGAATTAAATGAGGA 57.109 37.500 0.00 0.00 0.00 3.71
28 29 6.886459 TGTTCAAGGAGAGGAATTAAATGAGG 59.114 38.462 0.00 0.00 0.00 3.86
29 30 7.391554 TGTGTTCAAGGAGAGGAATTAAATGAG 59.608 37.037 0.00 0.00 0.00 2.90
30 31 7.230747 TGTGTTCAAGGAGAGGAATTAAATGA 58.769 34.615 0.00 0.00 0.00 2.57
31 32 7.452880 TGTGTTCAAGGAGAGGAATTAAATG 57.547 36.000 0.00 0.00 0.00 2.32
32 33 7.363268 GCATGTGTTCAAGGAGAGGAATTAAAT 60.363 37.037 0.00 0.00 0.00 1.40
33 34 6.071952 GCATGTGTTCAAGGAGAGGAATTAAA 60.072 38.462 0.00 0.00 0.00 1.52
34 35 5.415701 GCATGTGTTCAAGGAGAGGAATTAA 59.584 40.000 0.00 0.00 0.00 1.40
35 36 4.943705 GCATGTGTTCAAGGAGAGGAATTA 59.056 41.667 0.00 0.00 0.00 1.40
36 37 3.760684 GCATGTGTTCAAGGAGAGGAATT 59.239 43.478 0.00 0.00 0.00 2.17
37 38 3.350833 GCATGTGTTCAAGGAGAGGAAT 58.649 45.455 0.00 0.00 0.00 3.01
38 39 2.783135 GCATGTGTTCAAGGAGAGGAA 58.217 47.619 0.00 0.00 0.00 3.36
39 40 1.338105 CGCATGTGTTCAAGGAGAGGA 60.338 52.381 0.00 0.00 0.00 3.71
40 41 1.081892 CGCATGTGTTCAAGGAGAGG 58.918 55.000 0.00 0.00 0.00 3.69
41 42 1.081892 CCGCATGTGTTCAAGGAGAG 58.918 55.000 5.38 0.00 0.00 3.20
42 43 0.321564 CCCGCATGTGTTCAAGGAGA 60.322 55.000 5.38 0.00 0.00 3.71
43 44 0.606401 ACCCGCATGTGTTCAAGGAG 60.606 55.000 5.38 0.00 0.00 3.69
44 45 0.179004 AACCCGCATGTGTTCAAGGA 60.179 50.000 5.38 0.00 0.00 3.36
45 46 0.673437 AAACCCGCATGTGTTCAAGG 59.327 50.000 5.38 1.18 0.00 3.61
46 47 2.507339 AAAACCCGCATGTGTTCAAG 57.493 45.000 5.38 0.00 0.00 3.02
47 48 3.215151 TCTAAAACCCGCATGTGTTCAA 58.785 40.909 5.38 0.00 0.00 2.69
48 49 2.852449 TCTAAAACCCGCATGTGTTCA 58.148 42.857 5.38 0.00 0.00 3.18
49 50 4.165779 CAATCTAAAACCCGCATGTGTTC 58.834 43.478 5.38 0.00 0.00 3.18
50 51 3.056891 CCAATCTAAAACCCGCATGTGTT 60.057 43.478 5.38 0.00 0.00 3.32
51 52 2.491693 CCAATCTAAAACCCGCATGTGT 59.508 45.455 5.38 0.00 0.00 3.72
52 53 2.752354 TCCAATCTAAAACCCGCATGTG 59.248 45.455 0.00 0.00 0.00 3.21
53 54 3.016736 CTCCAATCTAAAACCCGCATGT 58.983 45.455 0.00 0.00 0.00 3.21
54 55 2.358898 CCTCCAATCTAAAACCCGCATG 59.641 50.000 0.00 0.00 0.00 4.06
55 56 2.654863 CCTCCAATCTAAAACCCGCAT 58.345 47.619 0.00 0.00 0.00 4.73
56 57 1.340600 CCCTCCAATCTAAAACCCGCA 60.341 52.381 0.00 0.00 0.00 5.69
57 58 1.340697 ACCCTCCAATCTAAAACCCGC 60.341 52.381 0.00 0.00 0.00 6.13
58 59 2.801077 ACCCTCCAATCTAAAACCCG 57.199 50.000 0.00 0.00 0.00 5.28
59 60 3.513912 CCAAACCCTCCAATCTAAAACCC 59.486 47.826 0.00 0.00 0.00 4.11
60 61 4.412843 TCCAAACCCTCCAATCTAAAACC 58.587 43.478 0.00 0.00 0.00 3.27
61 62 4.462834 CCTCCAAACCCTCCAATCTAAAAC 59.537 45.833 0.00 0.00 0.00 2.43
62 63 4.355588 TCCTCCAAACCCTCCAATCTAAAA 59.644 41.667 0.00 0.00 0.00 1.52
63 64 3.920197 TCCTCCAAACCCTCCAATCTAAA 59.080 43.478 0.00 0.00 0.00 1.85
64 65 3.537337 TCCTCCAAACCCTCCAATCTAA 58.463 45.455 0.00 0.00 0.00 2.10
65 66 3.214694 TCCTCCAAACCCTCCAATCTA 57.785 47.619 0.00 0.00 0.00 1.98
66 67 2.059756 TCCTCCAAACCCTCCAATCT 57.940 50.000 0.00 0.00 0.00 2.40
67 68 4.519906 TTATCCTCCAAACCCTCCAATC 57.480 45.455 0.00 0.00 0.00 2.67
68 69 6.606241 TTATTATCCTCCAAACCCTCCAAT 57.394 37.500 0.00 0.00 0.00 3.16
69 70 6.410222 TTTATTATCCTCCAAACCCTCCAA 57.590 37.500 0.00 0.00 0.00 3.53
70 71 6.372931 CATTTATTATCCTCCAAACCCTCCA 58.627 40.000 0.00 0.00 0.00 3.86
71 72 5.243954 GCATTTATTATCCTCCAAACCCTCC 59.756 44.000 0.00 0.00 0.00 4.30
72 73 6.071320 AGCATTTATTATCCTCCAAACCCTC 58.929 40.000 0.00 0.00 0.00 4.30
73 74 6.030727 AGCATTTATTATCCTCCAAACCCT 57.969 37.500 0.00 0.00 0.00 4.34
74 75 5.833131 TGAGCATTTATTATCCTCCAAACCC 59.167 40.000 0.00 0.00 0.00 4.11
75 76 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
78 79 9.866655 AGTTATTGAGCATTTATTATCCTCCAA 57.133 29.630 0.00 0.00 0.00 3.53
79 80 9.866655 AAGTTATTGAGCATTTATTATCCTCCA 57.133 29.630 0.00 0.00 0.00 3.86
111 112 8.204836 GCTTGGATCCAAATACTAAAGAGACTA 58.795 37.037 26.87 0.00 35.33 2.59
112 113 7.051000 GCTTGGATCCAAATACTAAAGAGACT 58.949 38.462 26.87 0.00 35.33 3.24
113 114 6.823689 TGCTTGGATCCAAATACTAAAGAGAC 59.176 38.462 26.87 8.83 35.33 3.36
114 115 6.957631 TGCTTGGATCCAAATACTAAAGAGA 58.042 36.000 26.87 1.15 35.33 3.10
115 116 7.255381 CCATGCTTGGATCCAAATACTAAAGAG 60.255 40.741 26.87 12.80 46.92 2.85
116 117 6.547141 CCATGCTTGGATCCAAATACTAAAGA 59.453 38.462 26.87 1.90 46.92 2.52
117 118 6.239120 CCCATGCTTGGATCCAAATACTAAAG 60.239 42.308 26.87 14.21 46.92 1.85
118 119 5.598005 CCCATGCTTGGATCCAAATACTAAA 59.402 40.000 26.87 8.81 46.92 1.85
119 120 5.139727 CCCATGCTTGGATCCAAATACTAA 58.860 41.667 26.87 10.11 46.92 2.24
120 121 4.167892 ACCCATGCTTGGATCCAAATACTA 59.832 41.667 26.87 12.31 46.92 1.82
121 122 3.052642 ACCCATGCTTGGATCCAAATACT 60.053 43.478 26.87 10.16 46.92 2.12
122 123 3.068590 CACCCATGCTTGGATCCAAATAC 59.931 47.826 26.87 19.00 46.92 1.89
123 124 3.053019 TCACCCATGCTTGGATCCAAATA 60.053 43.478 26.87 18.63 46.92 1.40
124 125 2.112998 CACCCATGCTTGGATCCAAAT 58.887 47.619 26.87 16.27 46.92 2.32
125 126 1.076841 TCACCCATGCTTGGATCCAAA 59.923 47.619 26.87 14.63 46.92 3.28
126 127 0.703488 TCACCCATGCTTGGATCCAA 59.297 50.000 25.53 25.53 46.92 3.53
127 128 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
128 129 0.466922 CCTCACCCATGCTTGGATCC 60.467 60.000 19.85 4.20 46.92 3.36
129 130 1.105759 GCCTCACCCATGCTTGGATC 61.106 60.000 19.85 0.00 46.92 3.36
130 131 1.076485 GCCTCACCCATGCTTGGAT 60.076 57.895 19.85 0.00 46.92 3.41
131 132 0.913934 TAGCCTCACCCATGCTTGGA 60.914 55.000 19.85 0.00 46.92 3.53
132 133 0.465097 CTAGCCTCACCCATGCTTGG 60.465 60.000 11.68 11.68 43.23 3.61
133 134 1.099879 GCTAGCCTCACCCATGCTTG 61.100 60.000 2.29 0.00 36.57 4.01
134 135 1.225704 GCTAGCCTCACCCATGCTT 59.774 57.895 2.29 0.00 36.57 3.91
135 136 1.565390 TTGCTAGCCTCACCCATGCT 61.565 55.000 13.29 0.00 39.10 3.79
136 137 1.077501 TTGCTAGCCTCACCCATGC 60.078 57.895 13.29 0.00 0.00 4.06
137 138 0.254178 ACTTGCTAGCCTCACCCATG 59.746 55.000 13.29 0.00 0.00 3.66
138 139 0.995024 AACTTGCTAGCCTCACCCAT 59.005 50.000 13.29 0.00 0.00 4.00
139 140 0.771127 AAACTTGCTAGCCTCACCCA 59.229 50.000 13.29 0.00 0.00 4.51
140 141 1.911057 AAAACTTGCTAGCCTCACCC 58.089 50.000 13.29 0.00 0.00 4.61
141 142 3.676093 ACTAAAACTTGCTAGCCTCACC 58.324 45.455 13.29 0.00 0.00 4.02
142 143 3.685272 GGACTAAAACTTGCTAGCCTCAC 59.315 47.826 13.29 0.00 0.00 3.51
143 144 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
144 145 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
145 146 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
146 147 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
147 148 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
148 149 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
149 150 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
150 151 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
151 152 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
152 153 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
153 154 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
154 155 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
155 156 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
156 157 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
157 158 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
158 159 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
159 160 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
160 161 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
163 164 4.837093 TCCCATGACTAAAAGTAGTGGG 57.163 45.455 17.22 17.22 46.41 4.61
164 165 8.801882 TTTAATCCCATGACTAAAAGTAGTGG 57.198 34.615 0.00 4.14 40.82 4.00
166 167 8.943002 CGTTTTAATCCCATGACTAAAAGTAGT 58.057 33.333 0.00 0.00 43.56 2.73
167 168 8.943002 ACGTTTTAATCCCATGACTAAAAGTAG 58.057 33.333 0.00 0.00 34.05 2.57
168 169 8.851541 ACGTTTTAATCCCATGACTAAAAGTA 57.148 30.769 0.00 0.00 34.05 2.24
169 170 7.754851 ACGTTTTAATCCCATGACTAAAAGT 57.245 32.000 0.00 0.00 34.05 2.66
170 171 9.931210 GATACGTTTTAATCCCATGACTAAAAG 57.069 33.333 0.00 0.00 34.05 2.27
171 172 8.895737 GGATACGTTTTAATCCCATGACTAAAA 58.104 33.333 4.01 0.00 36.44 1.52
172 173 8.047911 TGGATACGTTTTAATCCCATGACTAAA 58.952 33.333 11.65 0.00 40.91 1.85
173 174 7.566569 TGGATACGTTTTAATCCCATGACTAA 58.433 34.615 11.65 0.00 40.91 2.24
174 175 7.127012 TGGATACGTTTTAATCCCATGACTA 57.873 36.000 11.65 0.00 40.91 2.59
175 176 5.996644 TGGATACGTTTTAATCCCATGACT 58.003 37.500 11.65 0.00 40.91 3.41
176 177 6.687081 TTGGATACGTTTTAATCCCATGAC 57.313 37.500 11.65 0.00 40.91 3.06
177 178 5.298276 GCTTGGATACGTTTTAATCCCATGA 59.702 40.000 11.65 0.00 40.91 3.07
178 179 5.067153 TGCTTGGATACGTTTTAATCCCATG 59.933 40.000 11.65 3.32 40.91 3.66
179 180 5.067283 GTGCTTGGATACGTTTTAATCCCAT 59.933 40.000 11.65 0.00 40.91 4.00
180 181 4.396790 GTGCTTGGATACGTTTTAATCCCA 59.603 41.667 11.65 1.42 40.91 4.37
181 182 4.201980 GGTGCTTGGATACGTTTTAATCCC 60.202 45.833 11.65 0.00 40.91 3.85
182 183 4.201980 GGGTGCTTGGATACGTTTTAATCC 60.202 45.833 7.95 7.95 41.81 3.01
183 184 4.638865 AGGGTGCTTGGATACGTTTTAATC 59.361 41.667 0.00 0.00 42.51 1.75
184 185 4.595986 AGGGTGCTTGGATACGTTTTAAT 58.404 39.130 0.00 0.00 42.51 1.40
185 186 4.004982 GAGGGTGCTTGGATACGTTTTAA 58.995 43.478 0.00 0.00 42.51 1.52
186 187 3.602483 GAGGGTGCTTGGATACGTTTTA 58.398 45.455 0.00 0.00 42.51 1.52
187 188 2.433436 GAGGGTGCTTGGATACGTTTT 58.567 47.619 0.00 0.00 42.51 2.43
188 189 1.339727 GGAGGGTGCTTGGATACGTTT 60.340 52.381 0.00 0.00 42.51 3.60
189 190 0.252197 GGAGGGTGCTTGGATACGTT 59.748 55.000 0.00 0.00 42.51 3.99
190 191 0.907704 TGGAGGGTGCTTGGATACGT 60.908 55.000 0.00 0.00 42.51 3.57
191 192 0.251916 TTGGAGGGTGCTTGGATACG 59.748 55.000 0.00 0.00 42.51 3.06
192 193 2.092323 GTTTGGAGGGTGCTTGGATAC 58.908 52.381 0.00 0.00 0.00 2.24
193 194 1.707989 TGTTTGGAGGGTGCTTGGATA 59.292 47.619 0.00 0.00 0.00 2.59
194 195 0.482446 TGTTTGGAGGGTGCTTGGAT 59.518 50.000 0.00 0.00 0.00 3.41
195 196 0.467290 GTGTTTGGAGGGTGCTTGGA 60.467 55.000 0.00 0.00 0.00 3.53
196 197 0.754957 TGTGTTTGGAGGGTGCTTGG 60.755 55.000 0.00 0.00 0.00 3.61
197 198 1.331214 ATGTGTTTGGAGGGTGCTTG 58.669 50.000 0.00 0.00 0.00 4.01
198 199 1.963515 GAATGTGTTTGGAGGGTGCTT 59.036 47.619 0.00 0.00 0.00 3.91
199 200 1.133513 TGAATGTGTTTGGAGGGTGCT 60.134 47.619 0.00 0.00 0.00 4.40
200 201 1.327303 TGAATGTGTTTGGAGGGTGC 58.673 50.000 0.00 0.00 0.00 5.01
201 202 2.493278 GGATGAATGTGTTTGGAGGGTG 59.507 50.000 0.00 0.00 0.00 4.61
202 203 2.807676 GGATGAATGTGTTTGGAGGGT 58.192 47.619 0.00 0.00 0.00 4.34
203 204 1.745087 CGGATGAATGTGTTTGGAGGG 59.255 52.381 0.00 0.00 0.00 4.30
204 205 2.710377 TCGGATGAATGTGTTTGGAGG 58.290 47.619 0.00 0.00 0.00 4.30
205 206 3.424829 CGTTCGGATGAATGTGTTTGGAG 60.425 47.826 0.00 0.00 36.54 3.86
206 207 2.482336 CGTTCGGATGAATGTGTTTGGA 59.518 45.455 0.00 0.00 36.54 3.53
207 208 2.482336 TCGTTCGGATGAATGTGTTTGG 59.518 45.455 0.00 0.00 41.10 3.28
208 209 3.736213 CTCGTTCGGATGAATGTGTTTG 58.264 45.455 0.00 0.00 41.10 2.93
209 210 2.159627 GCTCGTTCGGATGAATGTGTTT 59.840 45.455 0.00 0.00 41.10 2.83
210 211 1.732259 GCTCGTTCGGATGAATGTGTT 59.268 47.619 0.00 0.00 41.10 3.32
211 212 1.066858 AGCTCGTTCGGATGAATGTGT 60.067 47.619 0.00 0.00 41.10 3.72
212 213 1.590238 GAGCTCGTTCGGATGAATGTG 59.410 52.381 0.00 0.00 41.10 3.21
213 214 1.799181 CGAGCTCGTTCGGATGAATGT 60.799 52.381 27.79 0.00 41.10 2.71
214 215 0.848942 CGAGCTCGTTCGGATGAATG 59.151 55.000 27.79 0.00 41.57 2.67
215 216 0.872021 GCGAGCTCGTTCGGATGAAT 60.872 55.000 34.46 0.00 40.79 2.57
216 217 1.516386 GCGAGCTCGTTCGGATGAA 60.516 57.895 34.46 0.00 40.79 2.57
217 218 2.102357 GCGAGCTCGTTCGGATGA 59.898 61.111 34.46 0.00 40.79 2.92
218 219 2.202610 TGCGAGCTCGTTCGGATG 60.203 61.111 34.46 7.30 40.79 3.51
219 220 1.374343 TACTGCGAGCTCGTTCGGAT 61.374 55.000 34.46 17.74 40.14 4.18
220 221 1.978712 CTACTGCGAGCTCGTTCGGA 61.979 60.000 34.46 19.52 40.79 4.55
221 222 1.583967 CTACTGCGAGCTCGTTCGG 60.584 63.158 34.46 25.48 40.79 4.30
222 223 1.583967 CCTACTGCGAGCTCGTTCG 60.584 63.158 34.46 24.35 43.23 3.95
223 224 0.248296 CTCCTACTGCGAGCTCGTTC 60.248 60.000 34.46 20.79 42.22 3.95
224 225 1.658686 CCTCCTACTGCGAGCTCGTT 61.659 60.000 34.46 22.00 42.22 3.85
225 226 2.115911 CCTCCTACTGCGAGCTCGT 61.116 63.158 34.46 19.41 42.22 4.18
226 227 1.377366 TTCCTCCTACTGCGAGCTCG 61.377 60.000 31.37 31.37 43.27 5.03
227 228 0.383949 CTTCCTCCTACTGCGAGCTC 59.616 60.000 2.73 2.73 0.00 4.09
228 229 1.671901 GCTTCCTCCTACTGCGAGCT 61.672 60.000 0.00 0.00 0.00 4.09
229 230 1.227118 GCTTCCTCCTACTGCGAGC 60.227 63.158 0.00 0.00 0.00 5.03
230 231 0.179124 GTGCTTCCTCCTACTGCGAG 60.179 60.000 0.00 0.00 0.00 5.03
231 232 0.612174 AGTGCTTCCTCCTACTGCGA 60.612 55.000 0.00 0.00 0.00 5.10
232 233 0.179124 GAGTGCTTCCTCCTACTGCG 60.179 60.000 0.00 0.00 0.00 5.18
233 234 0.898320 TGAGTGCTTCCTCCTACTGC 59.102 55.000 0.00 0.00 0.00 4.40
234 235 2.175202 AGTGAGTGCTTCCTCCTACTG 58.825 52.381 0.00 0.00 0.00 2.74
235 236 2.614134 AGTGAGTGCTTCCTCCTACT 57.386 50.000 0.00 0.00 0.00 2.57
236 237 3.686916 AAAGTGAGTGCTTCCTCCTAC 57.313 47.619 0.00 0.00 0.00 3.18
237 238 3.008049 GGAAAAGTGAGTGCTTCCTCCTA 59.992 47.826 0.00 0.00 35.46 2.94
238 239 2.224646 GGAAAAGTGAGTGCTTCCTCCT 60.225 50.000 0.00 0.00 35.46 3.69
239 240 2.155279 GGAAAAGTGAGTGCTTCCTCC 58.845 52.381 0.00 0.00 35.46 4.30
240 241 2.155279 GGGAAAAGTGAGTGCTTCCTC 58.845 52.381 0.00 0.00 37.94 3.71
241 242 1.543429 CGGGAAAAGTGAGTGCTTCCT 60.543 52.381 0.00 0.00 37.94 3.36
242 243 0.875059 CGGGAAAAGTGAGTGCTTCC 59.125 55.000 0.00 0.00 37.25 3.46
243 244 0.875059 CCGGGAAAAGTGAGTGCTTC 59.125 55.000 0.00 0.00 0.00 3.86
244 245 0.537371 CCCGGGAAAAGTGAGTGCTT 60.537 55.000 18.48 0.00 0.00 3.91
245 246 1.073199 CCCGGGAAAAGTGAGTGCT 59.927 57.895 18.48 0.00 0.00 4.40
246 247 0.822121 AACCCGGGAAAAGTGAGTGC 60.822 55.000 32.02 0.00 0.00 4.40
247 248 1.687563 AAACCCGGGAAAAGTGAGTG 58.312 50.000 32.02 0.00 0.00 3.51
248 249 3.801307 ATAAACCCGGGAAAAGTGAGT 57.199 42.857 32.02 0.00 0.00 3.41
249 250 7.771826 TCTTTATATAAACCCGGGAAAAGTGAG 59.228 37.037 32.02 13.88 0.00 3.51
250 251 7.553760 GTCTTTATATAAACCCGGGAAAAGTGA 59.446 37.037 32.02 6.21 0.00 3.41
251 252 7.555195 AGTCTTTATATAAACCCGGGAAAAGTG 59.445 37.037 32.02 3.76 0.00 3.16
252 253 7.636579 AGTCTTTATATAAACCCGGGAAAAGT 58.363 34.615 32.02 11.46 0.00 2.66
253 254 9.788889 ATAGTCTTTATATAAACCCGGGAAAAG 57.211 33.333 32.02 21.19 0.00 2.27
254 255 9.563748 CATAGTCTTTATATAAACCCGGGAAAA 57.436 33.333 32.02 12.12 0.00 2.29
255 256 8.158789 CCATAGTCTTTATATAAACCCGGGAAA 58.841 37.037 32.02 14.48 0.00 3.13
256 257 7.513436 TCCATAGTCTTTATATAAACCCGGGAA 59.487 37.037 32.02 12.97 0.00 3.97
257 258 7.018150 TCCATAGTCTTTATATAAACCCGGGA 58.982 38.462 32.02 4.68 0.00 5.14
258 259 7.248743 TCCATAGTCTTTATATAAACCCGGG 57.751 40.000 22.25 22.25 0.00 5.73
259 260 9.734984 AAATCCATAGTCTTTATATAAACCCGG 57.265 33.333 3.71 0.00 0.00 5.73
273 274 7.461749 TCCTCAAAAGACAAAATCCATAGTCT 58.538 34.615 0.00 0.00 42.72 3.24
274 275 7.687941 TCCTCAAAAGACAAAATCCATAGTC 57.312 36.000 0.00 0.00 0.00 2.59
275 276 8.477419 TTTCCTCAAAAGACAAAATCCATAGT 57.523 30.769 0.00 0.00 0.00 2.12
276 277 9.933723 ATTTTCCTCAAAAGACAAAATCCATAG 57.066 29.630 0.00 0.00 34.92 2.23
277 278 9.927668 GATTTTCCTCAAAAGACAAAATCCATA 57.072 29.630 0.00 0.00 36.61 2.74
278 279 8.654094 AGATTTTCCTCAAAAGACAAAATCCAT 58.346 29.630 10.39 0.00 39.49 3.41
279 280 7.927629 CAGATTTTCCTCAAAAGACAAAATCCA 59.072 33.333 10.39 0.00 39.49 3.41
280 281 7.928167 ACAGATTTTCCTCAAAAGACAAAATCC 59.072 33.333 10.39 0.00 39.49 3.01
281 282 8.877808 ACAGATTTTCCTCAAAAGACAAAATC 57.122 30.769 7.15 7.15 39.27 2.17
311 312 9.575783 GTGTTTTTCCATGTAAAGTTAGACAAA 57.424 29.630 0.00 0.00 0.00 2.83
312 313 8.962679 AGTGTTTTTCCATGTAAAGTTAGACAA 58.037 29.630 0.00 0.00 0.00 3.18
313 314 8.514330 AGTGTTTTTCCATGTAAAGTTAGACA 57.486 30.769 0.00 0.00 0.00 3.41
322 323 9.398538 AGTGTAAGTTAGTGTTTTTCCATGTAA 57.601 29.630 0.00 0.00 0.00 2.41
323 324 8.967664 AGTGTAAGTTAGTGTTTTTCCATGTA 57.032 30.769 0.00 0.00 0.00 2.29
324 325 7.875327 AGTGTAAGTTAGTGTTTTTCCATGT 57.125 32.000 0.00 0.00 0.00 3.21
330 331 9.850198 TGGGTTATAGTGTAAGTTAGTGTTTTT 57.150 29.630 0.00 0.00 0.00 1.94
331 332 9.850198 TTGGGTTATAGTGTAAGTTAGTGTTTT 57.150 29.630 0.00 0.00 0.00 2.43
342 343 9.810870 ACAAGGTTTTATTGGGTTATAGTGTAA 57.189 29.630 0.00 0.00 31.76 2.41
344 345 9.457436 CTACAAGGTTTTATTGGGTTATAGTGT 57.543 33.333 0.00 0.00 31.76 3.55
345 346 8.899771 CCTACAAGGTTTTATTGGGTTATAGTG 58.100 37.037 0.00 0.00 31.76 2.74
363 364 6.347402 CGATGAACTTTGTTGTACCTACAAGG 60.347 42.308 14.51 14.51 45.82 3.61
364 365 6.422701 TCGATGAACTTTGTTGTACCTACAAG 59.577 38.462 9.67 7.71 45.82 3.16
365 366 6.282167 TCGATGAACTTTGTTGTACCTACAA 58.718 36.000 6.57 6.57 43.32 2.41
366 367 5.845103 TCGATGAACTTTGTTGTACCTACA 58.155 37.500 0.00 0.00 0.00 2.74
367 368 6.154445 TCTCGATGAACTTTGTTGTACCTAC 58.846 40.000 0.00 0.00 0.00 3.18
368 369 6.208007 TCTCTCGATGAACTTTGTTGTACCTA 59.792 38.462 0.00 0.00 0.00 3.08
369 370 5.010719 TCTCTCGATGAACTTTGTTGTACCT 59.989 40.000 0.00 0.00 0.00 3.08
370 371 5.227908 TCTCTCGATGAACTTTGTTGTACC 58.772 41.667 0.00 0.00 0.00 3.34
371 372 6.764877 TTCTCTCGATGAACTTTGTTGTAC 57.235 37.500 0.00 0.00 0.00 2.90
372 373 7.780008 TTTTCTCTCGATGAACTTTGTTGTA 57.220 32.000 1.20 0.00 0.00 2.41
373 374 6.677781 TTTTCTCTCGATGAACTTTGTTGT 57.322 33.333 1.20 0.00 0.00 3.32
374 375 6.634436 CCTTTTTCTCTCGATGAACTTTGTTG 59.366 38.462 1.20 0.00 0.00 3.33
375 376 6.542370 TCCTTTTTCTCTCGATGAACTTTGTT 59.458 34.615 1.20 0.00 0.00 2.83
376 377 6.055588 TCCTTTTTCTCTCGATGAACTTTGT 58.944 36.000 1.20 0.00 0.00 2.83
377 378 6.545504 TCCTTTTTCTCTCGATGAACTTTG 57.454 37.500 1.20 0.00 0.00 2.77
378 379 6.936900 TCATCCTTTTTCTCTCGATGAACTTT 59.063 34.615 0.00 0.00 37.10 2.66
379 380 6.370166 GTCATCCTTTTTCTCTCGATGAACTT 59.630 38.462 0.00 0.00 40.59 2.66
380 381 5.872070 GTCATCCTTTTTCTCTCGATGAACT 59.128 40.000 0.00 0.00 40.59 3.01
381 382 5.872070 AGTCATCCTTTTTCTCTCGATGAAC 59.128 40.000 0.00 0.00 40.59 3.18
382 383 6.042638 AGTCATCCTTTTTCTCTCGATGAA 57.957 37.500 0.00 0.00 40.59 2.57
383 384 5.667539 AGTCATCCTTTTTCTCTCGATGA 57.332 39.130 0.00 0.00 37.57 2.92
384 385 7.834068 TTAAGTCATCCTTTTTCTCTCGATG 57.166 36.000 0.00 0.00 34.46 3.84
385 386 8.097662 AGTTTAAGTCATCCTTTTTCTCTCGAT 58.902 33.333 0.00 0.00 34.46 3.59
386 387 7.442656 AGTTTAAGTCATCCTTTTTCTCTCGA 58.557 34.615 0.00 0.00 34.46 4.04
387 388 7.659652 AGTTTAAGTCATCCTTTTTCTCTCG 57.340 36.000 0.00 0.00 34.46 4.04
388 389 9.670719 CAAAGTTTAAGTCATCCTTTTTCTCTC 57.329 33.333 0.00 0.00 34.46 3.20
389 390 9.190317 ACAAAGTTTAAGTCATCCTTTTTCTCT 57.810 29.630 0.00 0.00 34.46 3.10
392 393 9.459640 GGTACAAAGTTTAAGTCATCCTTTTTC 57.540 33.333 0.00 0.00 34.46 2.29
393 394 8.973182 TGGTACAAAGTTTAAGTCATCCTTTTT 58.027 29.630 0.00 0.00 31.82 1.94
394 395 8.528044 TGGTACAAAGTTTAAGTCATCCTTTT 57.472 30.769 0.00 0.00 31.82 2.27
430 431 7.713764 ATCAAACCTTTTATGTTTCAGCAAC 57.286 32.000 0.00 0.00 33.82 4.17
431 432 8.610896 CAAATCAAACCTTTTATGTTTCAGCAA 58.389 29.630 0.00 0.00 33.82 3.91
432 433 7.984050 TCAAATCAAACCTTTTATGTTTCAGCA 59.016 29.630 0.00 0.00 33.82 4.41
433 434 8.364129 TCAAATCAAACCTTTTATGTTTCAGC 57.636 30.769 0.00 0.00 33.82 4.26
443 444 9.018582 TGGATTTTGTTTCAAATCAAACCTTTT 57.981 25.926 8.11 0.00 37.19 2.27
444 445 8.572855 TGGATTTTGTTTCAAATCAAACCTTT 57.427 26.923 8.11 0.00 37.19 3.11
445 446 8.623030 CATGGATTTTGTTTCAAATCAAACCTT 58.377 29.630 8.11 0.00 37.19 3.50
446 447 7.229106 CCATGGATTTTGTTTCAAATCAAACCT 59.771 33.333 5.56 0.00 37.19 3.50
447 448 7.361894 CCATGGATTTTGTTTCAAATCAAACC 58.638 34.615 5.56 0.00 37.19 3.27
448 449 6.857451 GCCATGGATTTTGTTTCAAATCAAAC 59.143 34.615 18.40 0.00 37.19 2.93
449 450 6.016443 GGCCATGGATTTTGTTTCAAATCAAA 60.016 34.615 18.40 0.00 37.19 2.69
450 451 5.472820 GGCCATGGATTTTGTTTCAAATCAA 59.527 36.000 18.40 0.00 37.19 2.57
451 452 5.002516 GGCCATGGATTTTGTTTCAAATCA 58.997 37.500 18.40 2.34 37.19 2.57
452 453 5.247862 AGGCCATGGATTTTGTTTCAAATC 58.752 37.500 18.40 0.00 35.30 2.17
453 454 5.245584 AGGCCATGGATTTTGTTTCAAAT 57.754 34.783 18.40 0.00 0.00 2.32
454 455 4.703379 AGGCCATGGATTTTGTTTCAAA 57.297 36.364 18.40 0.00 0.00 2.69
455 456 4.141528 ACAAGGCCATGGATTTTGTTTCAA 60.142 37.500 18.40 0.00 0.00 2.69
456 457 3.390639 ACAAGGCCATGGATTTTGTTTCA 59.609 39.130 18.40 0.00 0.00 2.69
457 458 4.006780 ACAAGGCCATGGATTTTGTTTC 57.993 40.909 18.40 0.00 0.00 2.78
458 459 5.559148 TTACAAGGCCATGGATTTTGTTT 57.441 34.783 24.57 10.84 34.22 2.83
459 460 5.559148 TTTACAAGGCCATGGATTTTGTT 57.441 34.783 24.57 14.14 34.22 2.83
460 461 5.304778 GTTTTACAAGGCCATGGATTTTGT 58.695 37.500 18.40 21.86 36.15 2.83
461 462 4.694982 GGTTTTACAAGGCCATGGATTTTG 59.305 41.667 18.40 17.45 0.00 2.44
462 463 4.562552 CGGTTTTACAAGGCCATGGATTTT 60.563 41.667 18.40 4.96 0.00 1.82
463 464 3.056179 CGGTTTTACAAGGCCATGGATTT 60.056 43.478 18.40 5.55 0.00 2.17
464 465 2.495669 CGGTTTTACAAGGCCATGGATT 59.504 45.455 18.40 6.35 0.00 3.01
465 466 2.099405 CGGTTTTACAAGGCCATGGAT 58.901 47.619 18.40 0.00 0.00 3.41
466 467 1.540267 CGGTTTTACAAGGCCATGGA 58.460 50.000 18.40 0.00 0.00 3.41
467 468 0.530288 CCGGTTTTACAAGGCCATGG 59.470 55.000 13.45 7.63 0.00 3.66
468 469 0.530288 CCCGGTTTTACAAGGCCATG 59.470 55.000 5.01 5.77 0.00 3.66
469 470 0.613572 CCCCGGTTTTACAAGGCCAT 60.614 55.000 5.01 0.00 0.00 4.40
470 471 1.228613 CCCCGGTTTTACAAGGCCA 60.229 57.895 5.01 0.00 0.00 5.36
471 472 0.963856 CTCCCCGGTTTTACAAGGCC 60.964 60.000 0.00 0.00 0.00 5.19
472 473 1.592400 GCTCCCCGGTTTTACAAGGC 61.592 60.000 0.00 0.00 0.00 4.35
473 474 0.250989 TGCTCCCCGGTTTTACAAGG 60.251 55.000 0.00 0.00 0.00 3.61
474 475 1.165270 CTGCTCCCCGGTTTTACAAG 58.835 55.000 0.00 0.00 0.00 3.16
475 476 0.250989 CCTGCTCCCCGGTTTTACAA 60.251 55.000 0.00 0.00 0.00 2.41
476 477 1.377229 CCTGCTCCCCGGTTTTACA 59.623 57.895 0.00 0.00 0.00 2.41
477 478 1.378119 CCCTGCTCCCCGGTTTTAC 60.378 63.158 0.00 0.00 0.00 2.01
478 479 1.539372 TCCCTGCTCCCCGGTTTTA 60.539 57.895 0.00 0.00 0.00 1.52
479 480 2.856988 TCCCTGCTCCCCGGTTTT 60.857 61.111 0.00 0.00 0.00 2.43
480 481 3.330720 CTCCCTGCTCCCCGGTTT 61.331 66.667 0.00 0.00 0.00 3.27
485 486 2.365635 TAGTGCTCCCTGCTCCCC 60.366 66.667 0.00 0.00 43.37 4.81
486 487 2.736826 GGTAGTGCTCCCTGCTCCC 61.737 68.421 0.00 0.00 43.37 4.30
487 488 1.681486 GAGGTAGTGCTCCCTGCTCC 61.681 65.000 0.00 0.00 43.37 4.70
488 489 0.686112 AGAGGTAGTGCTCCCTGCTC 60.686 60.000 0.00 0.00 43.37 4.26
489 490 0.975040 CAGAGGTAGTGCTCCCTGCT 60.975 60.000 0.00 0.00 43.37 4.24
490 491 0.972983 TCAGAGGTAGTGCTCCCTGC 60.973 60.000 0.00 0.00 43.25 4.85
491 492 1.480137 CTTCAGAGGTAGTGCTCCCTG 59.520 57.143 0.00 0.00 0.00 4.45
492 493 1.359474 TCTTCAGAGGTAGTGCTCCCT 59.641 52.381 0.00 0.00 0.00 4.20
493 494 1.853963 TCTTCAGAGGTAGTGCTCCC 58.146 55.000 0.00 0.00 0.00 4.30
494 495 3.963428 TTTCTTCAGAGGTAGTGCTCC 57.037 47.619 0.00 0.00 0.00 4.70
495 496 6.169800 AGAAATTTCTTCAGAGGTAGTGCTC 58.830 40.000 15.11 0.00 32.55 4.26
496 497 6.120507 AGAAATTTCTTCAGAGGTAGTGCT 57.879 37.500 15.11 0.00 32.55 4.40
497 498 6.809630 AAGAAATTTCTTCAGAGGTAGTGC 57.190 37.500 24.62 0.00 43.72 4.40
499 500 9.286170 GGTAAAAGAAATTTCTTCAGAGGTAGT 57.714 33.333 28.87 11.14 46.22 2.73
500 501 9.284968 TGGTAAAAGAAATTTCTTCAGAGGTAG 57.715 33.333 28.87 0.00 46.22 3.18
501 502 9.063615 GTGGTAAAAGAAATTTCTTCAGAGGTA 57.936 33.333 28.87 13.98 46.22 3.08
502 503 7.780271 AGTGGTAAAAGAAATTTCTTCAGAGGT 59.220 33.333 28.87 13.09 46.22 3.85
503 504 8.171164 AGTGGTAAAAGAAATTTCTTCAGAGG 57.829 34.615 28.87 0.00 46.22 3.69
504 505 9.061435 AGAGTGGTAAAAGAAATTTCTTCAGAG 57.939 33.333 28.87 0.00 46.22 3.35
505 506 8.980481 AGAGTGGTAAAAGAAATTTCTTCAGA 57.020 30.769 28.87 16.54 46.22 3.27
507 508 9.847224 AGTAGAGTGGTAAAAGAAATTTCTTCA 57.153 29.630 28.87 20.56 46.22 3.02
512 513 9.722184 GGACTAGTAGAGTGGTAAAAGAAATTT 57.278 33.333 3.59 0.00 39.06 1.82
513 514 8.877195 TGGACTAGTAGAGTGGTAAAAGAAATT 58.123 33.333 3.59 0.00 39.06 1.82
514 515 8.431910 TGGACTAGTAGAGTGGTAAAAGAAAT 57.568 34.615 3.59 0.00 39.06 2.17
515 516 7.039223 CCTGGACTAGTAGAGTGGTAAAAGAAA 60.039 40.741 3.59 0.00 39.06 2.52
516 517 6.436532 CCTGGACTAGTAGAGTGGTAAAAGAA 59.563 42.308 3.59 0.00 39.06 2.52
517 518 5.950549 CCTGGACTAGTAGAGTGGTAAAAGA 59.049 44.000 3.59 0.00 39.06 2.52
518 519 5.394333 GCCTGGACTAGTAGAGTGGTAAAAG 60.394 48.000 3.59 0.00 39.06 2.27
519 520 4.465305 GCCTGGACTAGTAGAGTGGTAAAA 59.535 45.833 3.59 0.00 39.06 1.52
520 521 4.021916 GCCTGGACTAGTAGAGTGGTAAA 58.978 47.826 3.59 0.00 39.06 2.01
521 522 3.010920 TGCCTGGACTAGTAGAGTGGTAA 59.989 47.826 3.59 0.00 39.06 2.85
522 523 2.579400 TGCCTGGACTAGTAGAGTGGTA 59.421 50.000 3.59 0.00 39.06 3.25
523 524 1.358103 TGCCTGGACTAGTAGAGTGGT 59.642 52.381 3.59 0.00 39.06 4.16
524 525 1.751924 GTGCCTGGACTAGTAGAGTGG 59.248 57.143 3.59 2.00 39.06 4.00
525 526 1.402259 CGTGCCTGGACTAGTAGAGTG 59.598 57.143 3.59 0.00 39.06 3.51
526 527 1.682394 CCGTGCCTGGACTAGTAGAGT 60.682 57.143 3.59 0.00 42.90 3.24
527 528 1.025812 CCGTGCCTGGACTAGTAGAG 58.974 60.000 3.59 0.00 0.00 2.43
528 529 0.330604 ACCGTGCCTGGACTAGTAGA 59.669 55.000 3.59 0.00 0.00 2.59
529 530 0.456221 CACCGTGCCTGGACTAGTAG 59.544 60.000 0.00 0.00 0.00 2.57
530 531 0.038599 TCACCGTGCCTGGACTAGTA 59.961 55.000 0.00 0.00 0.00 1.82
531 532 0.830444 TTCACCGTGCCTGGACTAGT 60.830 55.000 0.00 0.00 0.00 2.57
540 541 0.958822 AGTGGATTTTTCACCGTGCC 59.041 50.000 0.00 0.00 35.87 5.01
565 566 1.132500 TGGTGTGGTGTGGTGTGATA 58.868 50.000 0.00 0.00 0.00 2.15
566 567 0.465460 GTGGTGTGGTGTGGTGTGAT 60.465 55.000 0.00 0.00 0.00 3.06
573 574 1.377856 TGTGGTGTGGTGTGGTGTG 60.378 57.895 0.00 0.00 0.00 3.82
574 575 1.377987 GTGTGGTGTGGTGTGGTGT 60.378 57.895 0.00 0.00 0.00 4.16
578 579 2.480610 GCTGGTGTGGTGTGGTGTG 61.481 63.158 0.00 0.00 0.00 3.82
579 580 2.124320 GCTGGTGTGGTGTGGTGT 60.124 61.111 0.00 0.00 0.00 4.16
586 587 2.457743 TATTTCGCCGCTGGTGTGGT 62.458 55.000 7.78 0.00 45.25 4.16
645 649 2.440247 GAAATGGTGGGCGAGGGG 60.440 66.667 0.00 0.00 0.00 4.79
674 688 1.137513 GAATCGAGATTTACCGCCGG 58.862 55.000 0.00 0.00 0.00 6.13
716 735 4.772687 GGAAAGGGACGGGCGGAC 62.773 72.222 0.00 0.00 0.00 4.79
896 934 1.090052 GTGGGGAATTTCTCGGCTCG 61.090 60.000 0.00 0.00 0.00 5.03
934 973 0.104120 AAGGGCGCAAACCAAAACTC 59.896 50.000 10.83 0.00 0.00 3.01
935 974 0.179086 CAAGGGCGCAAACCAAAACT 60.179 50.000 10.83 0.00 0.00 2.66
937 976 1.522580 GCAAGGGCGCAAACCAAAA 60.523 52.632 10.83 0.00 0.00 2.44
938 977 2.107953 GCAAGGGCGCAAACCAAA 59.892 55.556 10.83 0.00 0.00 3.28
1644 1698 1.213013 CTTCTCCGTCCTGGTCACG 59.787 63.158 1.24 1.24 39.52 4.35
1851 1905 3.181469 GCAACCGTGATAGTATCCTGGAA 60.181 47.826 19.40 0.00 0.00 3.53
1854 1908 3.068165 TGAGCAACCGTGATAGTATCCTG 59.932 47.826 7.69 0.26 0.00 3.86
2031 2085 4.712829 TCCTTGTCGTACCAATATCTTCCA 59.287 41.667 0.00 0.00 0.00 3.53
2153 2208 2.492010 GGTTTGGCTTTTCCCCTTCCTA 60.492 50.000 0.00 0.00 0.00 2.94
2353 2417 6.515272 AGCCCAATAAAAATACAGACACAG 57.485 37.500 0.00 0.00 0.00 3.66
2847 2917 9.965824 CAAACCAAATAAACATCTAACAGAACT 57.034 29.630 0.00 0.00 0.00 3.01
2902 2972 7.472334 AGCAATCAACTTCCATCAATAGTTT 57.528 32.000 0.00 0.00 30.08 2.66
2909 2979 4.910195 ACACTAGCAATCAACTTCCATCA 58.090 39.130 0.00 0.00 0.00 3.07
2911 2981 6.655078 AAAACACTAGCAATCAACTTCCAT 57.345 33.333 0.00 0.00 0.00 3.41
2928 2998 6.183360 GCCGTACTACATGTAGAGAAAAACAC 60.183 42.308 34.16 17.46 36.97 3.32
2929 2999 5.865552 GCCGTACTACATGTAGAGAAAAACA 59.134 40.000 34.16 9.58 36.97 2.83
2937 3007 2.042686 ACCGCCGTACTACATGTAGA 57.957 50.000 34.16 17.73 36.97 2.59
3094 3165 3.810721 AGATACCTATGAGGCTACGGT 57.189 47.619 0.00 0.00 39.63 4.83
3145 3216 8.450578 TGATGAACAACTTGTATGATATTCCC 57.549 34.615 0.00 0.00 0.00 3.97
3364 3442 1.733402 CTCACGGCCCTCTAGCAGAG 61.733 65.000 0.00 6.28 41.96 3.35
3404 3482 6.727394 TGAGTTTGGGTTATTTGGTATAGCT 58.273 36.000 3.20 0.00 0.00 3.32
3411 3489 4.662278 TCCTCTGAGTTTGGGTTATTTGG 58.338 43.478 3.66 0.00 0.00 3.28
3436 3514 3.724732 TGTTACCTTGTTGGGTATCCC 57.275 47.619 0.00 0.00 45.71 3.85
3479 3557 8.697846 ACTGCATATGATCTTCAAAAACATTG 57.302 30.769 6.97 0.00 0.00 2.82
3544 3624 8.823220 AGTATATGCAGGAATTTAAACCACTT 57.177 30.769 0.00 0.00 0.00 3.16
3734 3814 4.946157 AGCAACATCAGGGAGAAAATACAG 59.054 41.667 0.00 0.00 0.00 2.74
3864 4202 5.744171 TGTCATAATATGAAGTGCTGGTGT 58.256 37.500 4.30 0.00 41.69 4.16
4227 4702 8.681486 ATTTAGATGCAGTTTATACATGAGCA 57.319 30.769 0.00 0.00 34.78 4.26
4390 4868 4.504858 GCAACCTACATACTGCACTACTT 58.495 43.478 0.00 0.00 34.87 2.24
4651 5129 0.039074 ATCTTATTCTCGAGGCGCCG 60.039 55.000 23.20 10.72 0.00 6.46
4728 5206 5.398581 CCCCTACAGGACCATTTAGCAAATA 60.399 44.000 0.00 0.00 38.24 1.40
4757 5235 5.309323 GCAATGTGCAGTTTACCAGATTA 57.691 39.130 0.00 0.00 44.26 1.75
4778 5256 0.748005 TTAGGCAAGGCAGAATCGGC 60.748 55.000 0.00 0.00 0.00 5.54
4788 5266 8.370940 TGTTCTCATTCTCTATATTAGGCAAGG 58.629 37.037 0.00 0.00 0.00 3.61
4832 5310 3.798202 AGGAATTGAGCTTAGCTAACCG 58.202 45.455 6.75 0.00 39.88 4.44
4869 5347 4.142687 CCTGGGCAAAGTACGTAAAGATTG 60.143 45.833 0.00 1.90 0.00 2.67
4875 5353 3.236604 GCCTGGGCAAAGTACGTAA 57.763 52.632 6.75 0.00 41.49 3.18
5698 6216 0.247736 CTTCACCTTCCCGTCCTCTG 59.752 60.000 0.00 0.00 0.00 3.35
5754 6272 9.525409 CGGTTTATTTATACTGCTAGTTGTACT 57.475 33.333 0.00 0.00 0.00 2.73
5755 6273 9.305925 ACGGTTTATTTATACTGCTAGTTGTAC 57.694 33.333 0.00 0.00 0.00 2.90
5757 6275 9.525409 CTACGGTTTATTTATACTGCTAGTTGT 57.475 33.333 0.00 0.00 0.00 3.32
5758 6276 9.740239 TCTACGGTTTATTTATACTGCTAGTTG 57.260 33.333 0.00 0.00 0.00 3.16
5759 6277 9.741647 GTCTACGGTTTATTTATACTGCTAGTT 57.258 33.333 0.00 0.00 0.00 2.24
5760 6278 8.355913 GGTCTACGGTTTATTTATACTGCTAGT 58.644 37.037 0.00 0.00 0.00 2.57
5761 6279 8.355169 TGGTCTACGGTTTATTTATACTGCTAG 58.645 37.037 0.00 0.00 0.00 3.42
5762 6280 8.236585 TGGTCTACGGTTTATTTATACTGCTA 57.763 34.615 0.00 0.00 0.00 3.49
5763 6281 7.116075 TGGTCTACGGTTTATTTATACTGCT 57.884 36.000 0.00 0.00 0.00 4.24
5764 6282 7.871463 AGATGGTCTACGGTTTATTTATACTGC 59.129 37.037 0.00 0.00 0.00 4.40
5767 6285 9.351570 GCTAGATGGTCTACGGTTTATTTATAC 57.648 37.037 0.00 0.00 0.00 1.47
5768 6286 8.239314 CGCTAGATGGTCTACGGTTTATTTATA 58.761 37.037 0.00 0.00 0.00 0.98
5769 6287 7.040201 TCGCTAGATGGTCTACGGTTTATTTAT 60.040 37.037 0.00 0.00 30.31 1.40
5770 6288 6.262944 TCGCTAGATGGTCTACGGTTTATTTA 59.737 38.462 0.00 0.00 30.31 1.40
5771 6289 5.068198 TCGCTAGATGGTCTACGGTTTATTT 59.932 40.000 0.00 0.00 30.31 1.40
5772 6290 4.581824 TCGCTAGATGGTCTACGGTTTATT 59.418 41.667 0.00 0.00 30.31 1.40
5773 6291 4.023365 GTCGCTAGATGGTCTACGGTTTAT 60.023 45.833 0.00 0.00 30.31 1.40
5774 6292 3.313526 GTCGCTAGATGGTCTACGGTTTA 59.686 47.826 0.00 0.00 30.31 2.01
5775 6293 2.098770 GTCGCTAGATGGTCTACGGTTT 59.901 50.000 0.00 0.00 30.31 3.27
5776 6294 1.674962 GTCGCTAGATGGTCTACGGTT 59.325 52.381 0.00 0.00 30.31 4.44
5777 6295 1.307097 GTCGCTAGATGGTCTACGGT 58.693 55.000 0.00 0.00 30.31 4.83
5898 6416 0.468648 GTTCTACGGGGCCTTAGCAT 59.531 55.000 0.84 0.00 42.56 3.79
5966 6484 2.616376 CGTGTGTTTTCAGGTTGGATCA 59.384 45.455 0.00 0.00 0.00 2.92
5988 6506 2.313234 TGTTCATCGTTCGTCTTCGTC 58.687 47.619 0.00 0.00 38.33 4.20
6003 6521 4.005650 GTGGATTTGCTCAGATCTGTTCA 58.994 43.478 21.92 16.90 0.00 3.18
6013 6531 2.886523 CTGTCTTTGGTGGATTTGCTCA 59.113 45.455 0.00 0.00 0.00 4.26
6042 6560 0.244994 GCATGTGGAGTCGTGTCTCT 59.755 55.000 0.00 0.00 35.11 3.10
6050 6568 2.044946 GGGTGGGCATGTGGAGTC 60.045 66.667 0.00 0.00 0.00 3.36
6107 6626 4.788075 TCCCTGAAGATGGAATAAAGGTCA 59.212 41.667 0.00 0.00 0.00 4.02
6182 6702 6.373495 GGAGGCTCCGTTTTTAGATCTTTTTA 59.627 38.462 19.53 0.00 0.00 1.52
6285 6806 0.390340 CTAGCTTTCTGCCTCGCACA 60.390 55.000 0.00 0.00 44.23 4.57
6289 6810 0.250513 AACCCTAGCTTTCTGCCTCG 59.749 55.000 0.00 0.00 44.23 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.