Multiple sequence alignment - TraesCS7A01G033100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G033100 chr7A 100.000 6543 0 0 1 6543 14195023 14188481 0.000000e+00 12083.0
1 TraesCS7A01G033100 chr7A 88.696 115 9 4 3189 3300 14793356 14793243 3.180000e-28 137.0
2 TraesCS7A01G033100 chr7A 89.474 57 6 0 3254 3310 56116553 56116609 9.100000e-09 73.1
3 TraesCS7A01G033100 chr4A 92.614 5483 246 74 455 5839 721380739 721386160 0.000000e+00 7734.0
4 TraesCS7A01G033100 chr4A 86.475 451 28 9 6113 6543 721392995 721393432 1.290000e-126 464.0
5 TraesCS7A01G033100 chr4A 81.223 458 37 28 6102 6543 721386533 721386957 2.280000e-84 324.0
6 TraesCS7A01G033100 chr4A 93.151 146 10 0 5670 5815 722211195 722211340 1.430000e-51 215.0
7 TraesCS7A01G033100 chr4A 87.611 113 8 5 3191 3300 719097603 719097712 6.890000e-25 126.0
8 TraesCS7A01G033100 chr7D 96.335 3520 80 15 2433 5926 14883515 14880019 0.000000e+00 5740.0
9 TraesCS7A01G033100 chr7D 93.896 1540 60 16 865 2385 14885249 14883725 0.000000e+00 2292.0
10 TraesCS7A01G033100 chr7D 78.791 1108 205 28 4408 5500 434148768 434149860 0.000000e+00 717.0
11 TraesCS7A01G033100 chr7D 89.328 506 21 9 5916 6419 14879968 14879494 7.260000e-169 604.0
12 TraesCS7A01G033100 chr7D 83.054 478 30 19 418 867 14885743 14885289 2.860000e-103 387.0
13 TraesCS7A01G033100 chr5B 79.010 1010 202 6 4500 5501 127504592 127505599 0.000000e+00 682.0
14 TraesCS7A01G033100 chr5B 97.452 157 4 0 1 157 571834408 571834564 1.080000e-67 268.0
15 TraesCS7A01G033100 chr5B 74.201 438 98 14 5055 5486 395922270 395921842 1.130000e-37 169.0
16 TraesCS7A01G033100 chr5D 78.989 1009 202 9 4500 5500 115950588 115951594 0.000000e+00 680.0
17 TraesCS7A01G033100 chr5D 73.636 440 97 17 5055 5486 337302215 337301787 1.140000e-32 152.0
18 TraesCS7A01G033100 chr5D 100.000 28 0 0 90 117 227735804 227735777 1.200000e-02 52.8
19 TraesCS7A01G033100 chr5A 78.317 1010 207 11 4500 5500 122956696 122957702 5.530000e-180 641.0
20 TraesCS7A01G033100 chr5A 74.371 437 99 11 5055 5486 438472329 438471901 2.430000e-39 174.0
21 TraesCS7A01G033100 chr1B 77.358 954 193 19 3870 4813 383794993 383795933 1.600000e-150 544.0
22 TraesCS7A01G033100 chr1D 77.149 954 195 19 3870 4813 282284368 282285308 3.470000e-147 532.0
23 TraesCS7A01G033100 chr1A 77.044 954 196 19 3870 4813 354297866 354298806 1.620000e-145 527.0
24 TraesCS7A01G033100 chr3A 96.429 168 5 1 1 167 13255702 13255869 6.460000e-70 276.0
25 TraesCS7A01G033100 chr2D 82.230 287 46 5 1342 1627 73325483 73325201 6.550000e-60 243.0
26 TraesCS7A01G033100 chr3D 93.789 161 8 2 1 160 539884385 539884226 2.360000e-59 241.0
27 TraesCS7A01G033100 chr3D 100.000 32 0 0 6032 6063 71764049 71764018 7.090000e-05 60.2
28 TraesCS7A01G033100 chr7B 87.179 117 13 2 42 157 73927602 73927487 1.480000e-26 132.0
29 TraesCS7A01G033100 chr7B 97.222 36 1 0 86 121 73927520 73927555 1.970000e-05 62.1
30 TraesCS7A01G033100 chr4D 88.889 63 7 0 6026 6088 437685495 437685557 1.960000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G033100 chr7A 14188481 14195023 6542 True 12083.00 12083 100.00000 1 6543 1 chr7A.!!$R1 6542
1 TraesCS7A01G033100 chr4A 721380739 721386957 6218 False 4029.00 7734 86.91850 455 6543 2 chr4A.!!$F4 6088
2 TraesCS7A01G033100 chr7D 14879494 14885743 6249 True 2255.75 5740 90.65325 418 6419 4 chr7D.!!$R1 6001
3 TraesCS7A01G033100 chr7D 434148768 434149860 1092 False 717.00 717 78.79100 4408 5500 1 chr7D.!!$F1 1092
4 TraesCS7A01G033100 chr5B 127504592 127505599 1007 False 682.00 682 79.01000 4500 5501 1 chr5B.!!$F1 1001
5 TraesCS7A01G033100 chr5D 115950588 115951594 1006 False 680.00 680 78.98900 4500 5500 1 chr5D.!!$F1 1000
6 TraesCS7A01G033100 chr5A 122956696 122957702 1006 False 641.00 641 78.31700 4500 5500 1 chr5A.!!$F1 1000
7 TraesCS7A01G033100 chr1B 383794993 383795933 940 False 544.00 544 77.35800 3870 4813 1 chr1B.!!$F1 943
8 TraesCS7A01G033100 chr1D 282284368 282285308 940 False 532.00 532 77.14900 3870 4813 1 chr1D.!!$F1 943
9 TraesCS7A01G033100 chr1A 354297866 354298806 940 False 527.00 527 77.04400 3870 4813 1 chr1A.!!$F1 943

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
527 536 0.030092 CTCCCCTACCAATCCCTCCA 60.030 60.000 0.0 0.0 0.00 3.86 F
528 537 0.030092 TCCCCTACCAATCCCTCCAG 60.030 60.000 0.0 0.0 0.00 3.86 F
742 782 0.179189 CGGATTTGTTTCTCCTGCGC 60.179 55.000 0.0 0.0 0.00 6.09 F
964 1061 0.742281 GATCCATCCATCCATCCGCG 60.742 60.000 0.0 0.0 0.00 6.46 F
2774 3080 0.251165 CCCCAACACCGTCAAATCCT 60.251 55.000 0.0 0.0 0.00 3.24 F
3158 3464 0.268869 ATGGGCTCCCTGACTCCATA 59.731 55.000 6.5 0.0 36.55 2.74 F
3847 4177 1.283321 GAAGAAGGCAGACCCCTTGAT 59.717 52.381 0.0 0.0 45.03 2.57 F
5146 5479 1.227089 CCTCCTCAAGGTCATCGCG 60.227 63.158 0.0 0.0 40.67 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2468 2773 0.107643 GGGCCAGGTCTTCTATCAGC 59.892 60.000 4.39 0.00 0.00 4.26 R
2481 2787 2.425143 TCTAGAAATTGCAGGGCCAG 57.575 50.000 6.18 0.00 0.00 4.85 R
2633 2939 1.039856 AAACAACAGACATGCCCCAC 58.960 50.000 0.00 0.00 0.00 4.61 R
2912 3218 1.413767 CGCCTCCGTCATCAGAAACG 61.414 60.000 2.46 2.46 38.58 3.60 R
3611 3928 2.819019 TCCCAATATGCACACACTGTTG 59.181 45.455 0.00 0.00 0.00 3.33 R
5146 5479 1.043816 TGAAGGAGATCTCGATGCCC 58.956 55.000 16.46 2.13 0.00 5.36 R
5230 5569 0.683973 GGATCATGAGCGAGGTCCAT 59.316 55.000 4.63 0.00 0.00 3.41 R
6460 7025 0.102120 CTTGTTCTTGCGGCCAAACA 59.898 50.000 2.24 1.94 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.760047 ATGCCGAAGACCGCGCTT 62.760 61.111 5.56 0.00 36.10 4.68
38 39 4.735132 CGAAGACCGCGCTTGGGA 62.735 66.667 5.56 0.00 0.00 4.37
39 40 2.358247 GAAGACCGCGCTTGGGAA 60.358 61.111 5.56 0.00 0.00 3.97
40 41 2.358737 AAGACCGCGCTTGGGAAG 60.359 61.111 5.56 0.00 0.00 3.46
41 42 3.901797 AAGACCGCGCTTGGGAAGG 62.902 63.158 5.56 0.00 0.00 3.46
88 89 3.837578 GGGAGACGATACGAGCCA 58.162 61.111 0.00 0.00 0.00 4.75
89 90 1.655329 GGGAGACGATACGAGCCAG 59.345 63.158 0.00 0.00 0.00 4.85
90 91 0.818445 GGGAGACGATACGAGCCAGA 60.818 60.000 0.00 0.00 0.00 3.86
91 92 1.240256 GGAGACGATACGAGCCAGAT 58.760 55.000 0.00 0.00 0.00 2.90
92 93 1.198178 GGAGACGATACGAGCCAGATC 59.802 57.143 0.00 0.00 0.00 2.75
94 95 0.866427 GACGATACGAGCCAGATCGA 59.134 55.000 12.80 0.00 45.56 3.59
95 96 0.869068 ACGATACGAGCCAGATCGAG 59.131 55.000 12.80 3.26 45.56 4.04
96 97 0.453615 CGATACGAGCCAGATCGAGC 60.454 60.000 12.80 0.00 45.56 5.03
97 98 0.453615 GATACGAGCCAGATCGAGCG 60.454 60.000 12.80 0.00 45.56 5.03
98 99 1.857318 ATACGAGCCAGATCGAGCGG 61.857 60.000 12.80 7.11 45.56 5.52
120 121 3.764466 CTCCTGGCCGCTCGTTCT 61.764 66.667 0.00 0.00 0.00 3.01
121 122 3.997064 CTCCTGGCCGCTCGTTCTG 62.997 68.421 0.00 0.00 0.00 3.02
122 123 4.379243 CCTGGCCGCTCGTTCTGT 62.379 66.667 0.00 0.00 0.00 3.41
123 124 2.811317 CTGGCCGCTCGTTCTGTC 60.811 66.667 0.00 0.00 0.00 3.51
124 125 4.373116 TGGCCGCTCGTTCTGTCC 62.373 66.667 0.00 0.00 0.00 4.02
125 126 4.373116 GGCCGCTCGTTCTGTCCA 62.373 66.667 0.00 0.00 0.00 4.02
126 127 2.357034 GCCGCTCGTTCTGTCCAA 60.357 61.111 0.00 0.00 0.00 3.53
127 128 1.959226 GCCGCTCGTTCTGTCCAAA 60.959 57.895 0.00 0.00 0.00 3.28
128 129 1.298859 GCCGCTCGTTCTGTCCAAAT 61.299 55.000 0.00 0.00 0.00 2.32
129 130 2.004583 CCGCTCGTTCTGTCCAAATA 57.995 50.000 0.00 0.00 0.00 1.40
130 131 1.927174 CCGCTCGTTCTGTCCAAATAG 59.073 52.381 0.00 0.00 0.00 1.73
131 132 2.607187 CGCTCGTTCTGTCCAAATAGT 58.393 47.619 0.00 0.00 0.00 2.12
132 133 2.345641 CGCTCGTTCTGTCCAAATAGTG 59.654 50.000 0.00 0.00 0.00 2.74
133 134 2.094417 GCTCGTTCTGTCCAAATAGTGC 59.906 50.000 0.00 0.00 0.00 4.40
134 135 2.333926 TCGTTCTGTCCAAATAGTGCG 58.666 47.619 0.00 0.00 0.00 5.34
135 136 2.066262 CGTTCTGTCCAAATAGTGCGT 58.934 47.619 0.00 0.00 0.00 5.24
136 137 3.057386 TCGTTCTGTCCAAATAGTGCGTA 60.057 43.478 0.00 0.00 0.00 4.42
137 138 3.863424 CGTTCTGTCCAAATAGTGCGTAT 59.137 43.478 0.00 0.00 0.00 3.06
138 139 4.259810 CGTTCTGTCCAAATAGTGCGTATG 60.260 45.833 0.00 0.00 0.00 2.39
139 140 3.194861 TCTGTCCAAATAGTGCGTATGC 58.805 45.455 0.00 0.00 43.20 3.14
156 157 7.665080 GCGTATGCACTTTTTAGATTTTAGG 57.335 36.000 0.89 0.00 42.15 2.69
157 158 7.248437 GCGTATGCACTTTTTAGATTTTAGGT 58.752 34.615 0.89 0.00 42.15 3.08
158 159 7.753580 GCGTATGCACTTTTTAGATTTTAGGTT 59.246 33.333 0.89 0.00 42.15 3.50
159 160 9.620660 CGTATGCACTTTTTAGATTTTAGGTTT 57.379 29.630 0.00 0.00 0.00 3.27
186 187 4.729227 TTGACAAACCTTGGACTTTTCC 57.271 40.909 0.00 0.00 43.19 3.13
187 188 3.028130 TGACAAACCTTGGACTTTTCCC 58.972 45.455 0.00 0.00 42.01 3.97
188 189 2.364324 GACAAACCTTGGACTTTTCCCC 59.636 50.000 0.00 0.00 42.01 4.81
189 190 1.691976 CAAACCTTGGACTTTTCCCCC 59.308 52.381 0.00 0.00 42.01 5.40
190 191 0.938192 AACCTTGGACTTTTCCCCCA 59.062 50.000 0.00 0.00 42.01 4.96
191 192 0.482887 ACCTTGGACTTTTCCCCCAG 59.517 55.000 0.00 0.00 42.01 4.45
192 193 0.482887 CCTTGGACTTTTCCCCCAGT 59.517 55.000 0.00 0.00 42.01 4.00
193 194 1.133167 CCTTGGACTTTTCCCCCAGTT 60.133 52.381 0.00 0.00 42.01 3.16
194 195 2.677914 CTTGGACTTTTCCCCCAGTTT 58.322 47.619 0.00 0.00 42.01 2.66
195 196 2.858787 TGGACTTTTCCCCCAGTTTT 57.141 45.000 0.00 0.00 42.01 2.43
196 197 3.123392 TGGACTTTTCCCCCAGTTTTT 57.877 42.857 0.00 0.00 42.01 1.94
214 215 4.929819 TTTTTCCCTTGTTGACTAAGGC 57.070 40.909 0.00 0.00 42.68 4.35
215 216 2.178912 TTCCCTTGTTGACTAAGGCG 57.821 50.000 0.00 0.00 42.68 5.52
216 217 0.323629 TCCCTTGTTGACTAAGGCGG 59.676 55.000 0.00 0.00 42.68 6.13
217 218 0.323629 CCCTTGTTGACTAAGGCGGA 59.676 55.000 0.00 0.00 42.68 5.54
218 219 1.439679 CCTTGTTGACTAAGGCGGAC 58.560 55.000 0.00 0.00 38.38 4.79
219 220 1.068474 CTTGTTGACTAAGGCGGACG 58.932 55.000 0.00 0.00 0.00 4.79
220 221 0.947180 TTGTTGACTAAGGCGGACGC 60.947 55.000 8.39 8.39 41.06 5.19
230 231 3.107447 GCGGACGCCATTTTAGGG 58.893 61.111 5.20 0.00 34.56 3.53
231 232 1.450669 GCGGACGCCATTTTAGGGA 60.451 57.895 5.20 0.00 34.56 4.20
232 233 1.436983 GCGGACGCCATTTTAGGGAG 61.437 60.000 5.20 0.00 34.56 4.30
233 234 0.814010 CGGACGCCATTTTAGGGAGG 60.814 60.000 0.00 0.00 0.00 4.30
234 235 0.465642 GGACGCCATTTTAGGGAGGG 60.466 60.000 0.00 0.00 0.00 4.30
235 236 0.465642 GACGCCATTTTAGGGAGGGG 60.466 60.000 0.00 0.00 39.70 4.79
236 237 0.917333 ACGCCATTTTAGGGAGGGGA 60.917 55.000 0.00 0.00 37.50 4.81
237 238 0.465642 CGCCATTTTAGGGAGGGGAC 60.466 60.000 0.00 0.00 36.29 4.46
238 239 0.629058 GCCATTTTAGGGAGGGGACA 59.371 55.000 0.00 0.00 0.00 4.02
239 240 1.410224 GCCATTTTAGGGAGGGGACAG 60.410 57.143 0.00 0.00 0.00 3.51
240 241 1.410224 CCATTTTAGGGAGGGGACAGC 60.410 57.143 0.00 0.00 0.00 4.40
241 242 1.566231 CATTTTAGGGAGGGGACAGCT 59.434 52.381 0.00 0.00 0.00 4.24
242 243 1.755200 TTTTAGGGAGGGGACAGCTT 58.245 50.000 0.00 0.00 0.00 3.74
243 244 1.755200 TTTAGGGAGGGGACAGCTTT 58.245 50.000 0.00 0.00 0.00 3.51
244 245 1.755200 TTAGGGAGGGGACAGCTTTT 58.245 50.000 0.00 0.00 0.00 2.27
245 246 1.286248 TAGGGAGGGGACAGCTTTTC 58.714 55.000 0.00 0.00 0.00 2.29
246 247 0.476611 AGGGAGGGGACAGCTTTTCT 60.477 55.000 0.00 0.00 0.00 2.52
247 248 0.034960 GGGAGGGGACAGCTTTTCTC 60.035 60.000 0.00 0.00 0.00 2.87
248 249 0.034960 GGAGGGGACAGCTTTTCTCC 60.035 60.000 3.01 3.01 33.17 3.71
249 250 0.693049 GAGGGGACAGCTTTTCTCCA 59.307 55.000 12.73 0.00 35.85 3.86
250 251 0.402121 AGGGGACAGCTTTTCTCCAC 59.598 55.000 12.73 2.68 35.85 4.02
251 252 0.609406 GGGGACAGCTTTTCTCCACC 60.609 60.000 6.17 0.00 33.24 4.61
252 253 0.609406 GGGACAGCTTTTCTCCACCC 60.609 60.000 0.00 0.00 0.00 4.61
253 254 0.609406 GGACAGCTTTTCTCCACCCC 60.609 60.000 0.00 0.00 0.00 4.95
254 255 0.110486 GACAGCTTTTCTCCACCCCA 59.890 55.000 0.00 0.00 0.00 4.96
255 256 0.779997 ACAGCTTTTCTCCACCCCAT 59.220 50.000 0.00 0.00 0.00 4.00
256 257 1.180029 CAGCTTTTCTCCACCCCATG 58.820 55.000 0.00 0.00 0.00 3.66
257 258 0.613012 AGCTTTTCTCCACCCCATGC 60.613 55.000 0.00 0.00 0.00 4.06
258 259 0.899717 GCTTTTCTCCACCCCATGCA 60.900 55.000 0.00 0.00 0.00 3.96
259 260 1.631405 CTTTTCTCCACCCCATGCAA 58.369 50.000 0.00 0.00 0.00 4.08
260 261 1.969923 CTTTTCTCCACCCCATGCAAA 59.030 47.619 0.00 0.00 0.00 3.68
261 262 1.337118 TTTCTCCACCCCATGCAAAC 58.663 50.000 0.00 0.00 0.00 2.93
262 263 0.187117 TTCTCCACCCCATGCAAACA 59.813 50.000 0.00 0.00 0.00 2.83
263 264 0.187117 TCTCCACCCCATGCAAACAA 59.813 50.000 0.00 0.00 0.00 2.83
264 265 1.047002 CTCCACCCCATGCAAACAAA 58.953 50.000 0.00 0.00 0.00 2.83
265 266 0.755686 TCCACCCCATGCAAACAAAC 59.244 50.000 0.00 0.00 0.00 2.93
266 267 0.250252 CCACCCCATGCAAACAAACC 60.250 55.000 0.00 0.00 0.00 3.27
267 268 0.467384 CACCCCATGCAAACAAACCA 59.533 50.000 0.00 0.00 0.00 3.67
268 269 0.758123 ACCCCATGCAAACAAACCAG 59.242 50.000 0.00 0.00 0.00 4.00
269 270 1.047002 CCCCATGCAAACAAACCAGA 58.953 50.000 0.00 0.00 0.00 3.86
270 271 1.001181 CCCCATGCAAACAAACCAGAG 59.999 52.381 0.00 0.00 0.00 3.35
271 272 1.606224 CCCATGCAAACAAACCAGAGC 60.606 52.381 0.00 0.00 0.00 4.09
272 273 1.606224 CCATGCAAACAAACCAGAGCC 60.606 52.381 0.00 0.00 0.00 4.70
273 274 1.068895 CATGCAAACAAACCAGAGCCA 59.931 47.619 0.00 0.00 0.00 4.75
274 275 1.189752 TGCAAACAAACCAGAGCCAA 58.810 45.000 0.00 0.00 0.00 4.52
275 276 1.552337 TGCAAACAAACCAGAGCCAAA 59.448 42.857 0.00 0.00 0.00 3.28
276 277 2.027745 TGCAAACAAACCAGAGCCAAAA 60.028 40.909 0.00 0.00 0.00 2.44
277 278 3.006247 GCAAACAAACCAGAGCCAAAAA 58.994 40.909 0.00 0.00 0.00 1.94
278 279 3.063861 GCAAACAAACCAGAGCCAAAAAG 59.936 43.478 0.00 0.00 0.00 2.27
279 280 4.502962 CAAACAAACCAGAGCCAAAAAGA 58.497 39.130 0.00 0.00 0.00 2.52
280 281 4.817318 AACAAACCAGAGCCAAAAAGAA 57.183 36.364 0.00 0.00 0.00 2.52
281 282 4.391405 ACAAACCAGAGCCAAAAAGAAG 57.609 40.909 0.00 0.00 0.00 2.85
282 283 3.126073 CAAACCAGAGCCAAAAAGAAGC 58.874 45.455 0.00 0.00 0.00 3.86
283 284 2.371658 ACCAGAGCCAAAAAGAAGCT 57.628 45.000 0.00 0.00 40.24 3.74
284 285 2.670939 ACCAGAGCCAAAAAGAAGCTT 58.329 42.857 0.00 0.00 36.87 3.74
285 286 3.033909 ACCAGAGCCAAAAAGAAGCTTT 58.966 40.909 0.00 0.00 36.87 3.51
286 287 3.452264 ACCAGAGCCAAAAAGAAGCTTTT 59.548 39.130 0.00 0.00 36.87 2.27
287 288 4.080919 ACCAGAGCCAAAAAGAAGCTTTTT 60.081 37.500 11.03 11.03 36.87 1.94
304 305 2.781681 TTTTTCGTCATCCCTCCCTC 57.218 50.000 0.00 0.00 0.00 4.30
305 306 0.909623 TTTTCGTCATCCCTCCCTCC 59.090 55.000 0.00 0.00 0.00 4.30
306 307 0.252513 TTTCGTCATCCCTCCCTCCA 60.253 55.000 0.00 0.00 0.00 3.86
307 308 0.031111 TTCGTCATCCCTCCCTCCAT 60.031 55.000 0.00 0.00 0.00 3.41
308 309 0.470080 TCGTCATCCCTCCCTCCATC 60.470 60.000 0.00 0.00 0.00 3.51
309 310 0.760567 CGTCATCCCTCCCTCCATCA 60.761 60.000 0.00 0.00 0.00 3.07
310 311 1.739750 GTCATCCCTCCCTCCATCAT 58.260 55.000 0.00 0.00 0.00 2.45
311 312 1.627834 GTCATCCCTCCCTCCATCATC 59.372 57.143 0.00 0.00 0.00 2.92
312 313 1.511299 TCATCCCTCCCTCCATCATCT 59.489 52.381 0.00 0.00 0.00 2.90
313 314 1.629353 CATCCCTCCCTCCATCATCTG 59.371 57.143 0.00 0.00 0.00 2.90
314 315 0.765903 TCCCTCCCTCCATCATCTGC 60.766 60.000 0.00 0.00 0.00 4.26
315 316 1.058428 CCCTCCCTCCATCATCTGCA 61.058 60.000 0.00 0.00 0.00 4.41
316 317 0.841961 CCTCCCTCCATCATCTGCAA 59.158 55.000 0.00 0.00 0.00 4.08
317 318 1.213678 CCTCCCTCCATCATCTGCAAA 59.786 52.381 0.00 0.00 0.00 3.68
318 319 2.357465 CCTCCCTCCATCATCTGCAAAA 60.357 50.000 0.00 0.00 0.00 2.44
319 320 3.359033 CTCCCTCCATCATCTGCAAAAA 58.641 45.455 0.00 0.00 0.00 1.94
344 345 8.642908 AATAAAGAACCAAAAAGAAAAGGTCG 57.357 30.769 0.00 0.00 32.05 4.79
345 346 5.654603 AAGAACCAAAAAGAAAAGGTCGT 57.345 34.783 0.00 0.00 32.05 4.34
346 347 5.654603 AGAACCAAAAAGAAAAGGTCGTT 57.345 34.783 0.00 0.00 32.05 3.85
347 348 6.032956 AGAACCAAAAAGAAAAGGTCGTTT 57.967 33.333 0.00 0.00 39.29 3.60
348 349 5.867174 AGAACCAAAAAGAAAAGGTCGTTTG 59.133 36.000 0.00 0.00 37.89 2.93
349 350 5.394224 ACCAAAAAGAAAAGGTCGTTTGA 57.606 34.783 0.00 0.00 37.89 2.69
350 351 5.785243 ACCAAAAAGAAAAGGTCGTTTGAA 58.215 33.333 0.00 0.00 37.89 2.69
351 352 6.224584 ACCAAAAAGAAAAGGTCGTTTGAAA 58.775 32.000 0.00 0.00 37.89 2.69
352 353 6.146510 ACCAAAAAGAAAAGGTCGTTTGAAAC 59.853 34.615 0.00 0.00 37.89 2.78
353 354 6.367695 CCAAAAAGAAAAGGTCGTTTGAAACT 59.632 34.615 6.49 0.00 37.89 2.66
354 355 7.095397 CCAAAAAGAAAAGGTCGTTTGAAACTT 60.095 33.333 6.49 0.00 37.89 2.66
355 356 7.956420 AAAAGAAAAGGTCGTTTGAAACTTT 57.044 28.000 6.49 0.00 36.69 2.66
356 357 7.956420 AAAGAAAAGGTCGTTTGAAACTTTT 57.044 28.000 6.49 6.05 41.96 2.27
357 358 7.956420 AAGAAAAGGTCGTTTGAAACTTTTT 57.044 28.000 6.49 7.57 40.61 1.94
358 359 7.346208 AGAAAAGGTCGTTTGAAACTTTTTG 57.654 32.000 6.49 0.00 40.61 2.44
359 360 6.367695 AGAAAAGGTCGTTTGAAACTTTTTGG 59.632 34.615 6.49 0.00 40.61 3.28
360 361 3.517602 AGGTCGTTTGAAACTTTTTGGC 58.482 40.909 6.49 0.00 0.00 4.52
361 362 3.194755 AGGTCGTTTGAAACTTTTTGGCT 59.805 39.130 6.49 0.00 0.00 4.75
362 363 3.550275 GGTCGTTTGAAACTTTTTGGCTC 59.450 43.478 6.49 0.00 0.00 4.70
363 364 3.550275 GTCGTTTGAAACTTTTTGGCTCC 59.450 43.478 6.49 0.00 0.00 4.70
364 365 2.863740 CGTTTGAAACTTTTTGGCTCCC 59.136 45.455 6.49 0.00 0.00 4.30
365 366 3.202906 GTTTGAAACTTTTTGGCTCCCC 58.797 45.455 0.00 0.00 0.00 4.81
366 367 1.419381 TGAAACTTTTTGGCTCCCCC 58.581 50.000 0.00 0.00 0.00 5.40
367 368 1.343478 TGAAACTTTTTGGCTCCCCCA 60.343 47.619 0.00 0.00 43.51 4.96
368 369 1.977854 GAAACTTTTTGGCTCCCCCAT 59.022 47.619 0.00 0.00 44.89 4.00
369 370 1.351076 AACTTTTTGGCTCCCCCATG 58.649 50.000 0.00 0.00 44.89 3.66
370 371 1.194121 ACTTTTTGGCTCCCCCATGC 61.194 55.000 0.00 0.00 44.89 4.06
371 372 1.902765 CTTTTTGGCTCCCCCATGCC 61.903 60.000 0.00 0.00 44.89 4.40
375 376 4.928140 GGCTCCCCCATGCCCATG 62.928 72.222 1.28 1.28 43.11 3.66
376 377 4.147587 GCTCCCCCATGCCCATGT 62.148 66.667 7.42 0.00 37.11 3.21
377 378 2.123597 CTCCCCCATGCCCATGTG 60.124 66.667 7.42 0.00 37.11 3.21
378 379 3.744003 CTCCCCCATGCCCATGTGG 62.744 68.421 7.42 5.29 36.30 4.17
391 392 3.890527 ATGTGGCCATGACCTCTTC 57.109 52.632 9.72 0.00 0.00 2.87
392 393 0.257039 ATGTGGCCATGACCTCTTCC 59.743 55.000 9.72 0.00 0.00 3.46
393 394 1.077429 GTGGCCATGACCTCTTCCC 60.077 63.158 9.72 0.00 0.00 3.97
394 395 2.308722 TGGCCATGACCTCTTCCCC 61.309 63.158 0.00 0.00 0.00 4.81
395 396 2.003548 GGCCATGACCTCTTCCCCT 61.004 63.158 0.00 0.00 0.00 4.79
396 397 1.529309 GCCATGACCTCTTCCCCTC 59.471 63.158 0.00 0.00 0.00 4.30
397 398 1.274703 GCCATGACCTCTTCCCCTCA 61.275 60.000 0.00 0.00 0.00 3.86
398 399 0.543749 CCATGACCTCTTCCCCTCAC 59.456 60.000 0.00 0.00 0.00 3.51
399 400 1.279496 CATGACCTCTTCCCCTCACA 58.721 55.000 0.00 0.00 0.00 3.58
400 401 1.065854 CATGACCTCTTCCCCTCACAC 60.066 57.143 0.00 0.00 0.00 3.82
401 402 0.191064 TGACCTCTTCCCCTCACACT 59.809 55.000 0.00 0.00 0.00 3.55
402 403 0.899019 GACCTCTTCCCCTCACACTC 59.101 60.000 0.00 0.00 0.00 3.51
403 404 0.489567 ACCTCTTCCCCTCACACTCT 59.510 55.000 0.00 0.00 0.00 3.24
404 405 1.132689 ACCTCTTCCCCTCACACTCTT 60.133 52.381 0.00 0.00 0.00 2.85
405 406 1.552792 CCTCTTCCCCTCACACTCTTC 59.447 57.143 0.00 0.00 0.00 2.87
406 407 1.552792 CTCTTCCCCTCACACTCTTCC 59.447 57.143 0.00 0.00 0.00 3.46
407 408 0.615850 CTTCCCCTCACACTCTTCCC 59.384 60.000 0.00 0.00 0.00 3.97
408 409 0.193574 TTCCCCTCACACTCTTCCCT 59.806 55.000 0.00 0.00 0.00 4.20
409 410 0.193574 TCCCCTCACACTCTTCCCTT 59.806 55.000 0.00 0.00 0.00 3.95
410 411 0.615850 CCCCTCACACTCTTCCCTTC 59.384 60.000 0.00 0.00 0.00 3.46
411 412 0.615850 CCCTCACACTCTTCCCTTCC 59.384 60.000 0.00 0.00 0.00 3.46
412 413 0.615850 CCTCACACTCTTCCCTTCCC 59.384 60.000 0.00 0.00 0.00 3.97
413 414 1.352083 CTCACACTCTTCCCTTCCCA 58.648 55.000 0.00 0.00 0.00 4.37
414 415 1.002544 CTCACACTCTTCCCTTCCCAC 59.997 57.143 0.00 0.00 0.00 4.61
415 416 1.059913 CACACTCTTCCCTTCCCACT 58.940 55.000 0.00 0.00 0.00 4.00
416 417 1.059913 ACACTCTTCCCTTCCCACTG 58.940 55.000 0.00 0.00 0.00 3.66
440 441 2.359230 GTTCCTCGCCAGCTGCTT 60.359 61.111 8.66 0.00 38.05 3.91
444 445 4.093291 CTCGCCAGCTGCTTCCCT 62.093 66.667 8.66 0.00 38.05 4.20
447 448 4.811364 GCCAGCTGCTTCCCTCCC 62.811 72.222 8.66 0.00 36.87 4.30
448 449 4.120755 CCAGCTGCTTCCCTCCCC 62.121 72.222 8.66 0.00 0.00 4.81
449 450 3.013932 CAGCTGCTTCCCTCCCCT 61.014 66.667 0.00 0.00 0.00 4.79
450 451 2.204213 AGCTGCTTCCCTCCCCTT 60.204 61.111 0.00 0.00 0.00 3.95
453 454 3.009115 TGCTTCCCTCCCCTTCCG 61.009 66.667 0.00 0.00 0.00 4.30
470 471 2.436824 GCCTTCCTGCGGACTTCC 60.437 66.667 0.00 0.00 0.00 3.46
481 482 1.707200 GGACTTCCTCCTCCTCCCT 59.293 63.158 0.00 0.00 35.89 4.20
482 483 0.397957 GGACTTCCTCCTCCTCCCTC 60.398 65.000 0.00 0.00 35.89 4.30
483 484 0.336737 GACTTCCTCCTCCTCCCTCA 59.663 60.000 0.00 0.00 0.00 3.86
499 508 1.916181 CCTCAATCCCCACCACTACTT 59.084 52.381 0.00 0.00 0.00 2.24
506 515 1.203994 CCCCACCACTACTTGTACTCG 59.796 57.143 0.00 0.00 0.00 4.18
523 532 2.819284 CGCCTCCCCTACCAATCCC 61.819 68.421 0.00 0.00 0.00 3.85
525 534 1.419720 GCCTCCCCTACCAATCCCTC 61.420 65.000 0.00 0.00 0.00 4.30
526 535 0.768609 CCTCCCCTACCAATCCCTCC 60.769 65.000 0.00 0.00 0.00 4.30
527 536 0.030092 CTCCCCTACCAATCCCTCCA 60.030 60.000 0.00 0.00 0.00 3.86
528 537 0.030092 TCCCCTACCAATCCCTCCAG 60.030 60.000 0.00 0.00 0.00 3.86
543 552 1.755783 CCAGCCTCATTCTTGCCCC 60.756 63.158 0.00 0.00 0.00 5.80
544 553 1.305623 CAGCCTCATTCTTGCCCCT 59.694 57.895 0.00 0.00 0.00 4.79
545 554 0.750911 CAGCCTCATTCTTGCCCCTC 60.751 60.000 0.00 0.00 0.00 4.30
582 613 1.700042 ATTGCTCCGTCCTGGGATCC 61.700 60.000 1.92 1.92 38.76 3.36
590 621 1.337260 CGTCCTGGGATCCATCGATTC 60.337 57.143 15.23 0.00 30.82 2.52
599 630 1.165907 TCCATCGATTCATTGCCCGC 61.166 55.000 0.00 0.00 0.00 6.13
614 645 3.793144 CGCCGCTCCTTTGACTGC 61.793 66.667 0.00 0.00 0.00 4.40
621 652 1.004560 TCCTTTGACTGCCTCGCTG 60.005 57.895 0.00 0.00 0.00 5.18
668 708 0.678048 GCATCCCGAGCTTTCTTGGT 60.678 55.000 0.00 0.00 41.52 3.67
692 732 1.862602 ATCCGTGGGTTTTCTTGCGC 61.863 55.000 0.00 0.00 0.00 6.09
717 757 4.676586 CGGTGTTGCGCGGGTTTC 62.677 66.667 8.83 0.00 0.00 2.78
742 782 0.179189 CGGATTTGTTTCTCCTGCGC 60.179 55.000 0.00 0.00 0.00 6.09
785 835 1.230635 AATCTGTGCTGTGTCCGTGC 61.231 55.000 0.00 0.00 0.00 5.34
894 986 4.336713 CGATCTTTCCCCCTCTTTTGATTC 59.663 45.833 0.00 0.00 0.00 2.52
895 987 4.740154 TCTTTCCCCCTCTTTTGATTCA 57.260 40.909 0.00 0.00 0.00 2.57
897 989 5.079643 TCTTTCCCCCTCTTTTGATTCAAG 58.920 41.667 0.00 0.00 0.00 3.02
964 1061 0.742281 GATCCATCCATCCATCCGCG 60.742 60.000 0.00 0.00 0.00 6.46
984 1081 1.135170 GCAGCTCAAGAAAAGGCATCC 60.135 52.381 0.00 0.00 0.00 3.51
1010 1115 3.490249 CGGACAGACGCTATGGATAACAA 60.490 47.826 0.00 0.00 0.00 2.83
1428 1536 0.895530 TGGACAAGGTCATCGACTCC 59.104 55.000 0.00 0.00 33.68 3.85
1848 1959 3.527253 CCTATGGGTATGGGAATGCCATA 59.473 47.826 9.54 9.54 37.11 2.74
1950 2067 1.073897 GGAGTTCACCAGCAAGCCT 59.926 57.895 0.00 0.00 0.00 4.58
2015 2132 2.158769 TCAGCCCATACAGGTATTGCTG 60.159 50.000 22.60 22.60 43.34 4.41
2029 2146 4.392138 GGTATTGCTGAACTTCACTACACC 59.608 45.833 0.00 0.00 0.00 4.16
2041 2158 2.368548 TCACTACACCTGCATGTTCTGT 59.631 45.455 0.00 0.00 33.85 3.41
2080 2209 2.114616 TGGATGTTGGGCTTGTTTGTT 58.885 42.857 0.00 0.00 0.00 2.83
2216 2345 9.087871 AGTTGCTATGATTCAGTCAGTATCTAT 57.912 33.333 0.00 0.00 40.92 1.98
2279 2417 5.510520 GCTACATCTTCCTATCTTGTCCTGG 60.511 48.000 0.00 0.00 0.00 4.45
2381 2520 9.314321 CACTAGATATTTACCGTTCAAGTTCAT 57.686 33.333 0.00 0.00 0.00 2.57
2404 2704 9.574516 TCATACTACTTTGTAGATAGCATCTCA 57.425 33.333 11.17 0.32 40.76 3.27
2410 2710 7.615403 ACTTTGTAGATAGCATCTCAGTTTGA 58.385 34.615 2.47 0.00 40.76 2.69
2411 2711 8.263640 ACTTTGTAGATAGCATCTCAGTTTGAT 58.736 33.333 2.47 0.00 40.76 2.57
2412 2712 9.755804 CTTTGTAGATAGCATCTCAGTTTGATA 57.244 33.333 2.47 0.00 40.76 2.15
2468 2773 5.772825 TGTTTCATTCTCCCTTGAGTTTG 57.227 39.130 0.00 0.00 39.75 2.93
2481 2787 4.633565 CCTTGAGTTTGCTGATAGAAGACC 59.366 45.833 0.00 0.00 0.00 3.85
2484 2790 4.187694 GAGTTTGCTGATAGAAGACCTGG 58.812 47.826 0.00 0.00 0.00 4.45
2486 2792 0.833287 TGCTGATAGAAGACCTGGCC 59.167 55.000 0.00 0.00 0.00 5.36
2499 2805 1.341383 ACCTGGCCCTGCAATTTCTAG 60.341 52.381 0.00 0.00 0.00 2.43
2633 2939 3.130516 AGAATGAAGATGCAATGTGGCTG 59.869 43.478 0.00 0.00 34.04 4.85
2723 3029 1.908066 GCCCTGTTAACCGAGCAACG 61.908 60.000 2.48 0.00 42.18 4.10
2774 3080 0.251165 CCCCAACACCGTCAAATCCT 60.251 55.000 0.00 0.00 0.00 3.24
2777 3083 2.486592 CCCAACACCGTCAAATCCTAAC 59.513 50.000 0.00 0.00 0.00 2.34
2840 3146 2.026822 TGCTGATCCAGAGAAAGAACCC 60.027 50.000 0.00 0.00 32.44 4.11
2906 3212 4.837972 ACTATCCTGTTGAGAAGCTTTCC 58.162 43.478 0.00 0.00 0.00 3.13
2912 3218 3.403038 TGTTGAGAAGCTTTCCTGCTAC 58.597 45.455 0.00 0.00 43.24 3.58
2933 3239 2.852495 TTTCTGATGACGGAGGCGCC 62.852 60.000 21.89 21.89 32.64 6.53
2951 3257 1.751351 GCCCTCCTTACATTTGAAGCC 59.249 52.381 0.00 0.00 0.00 4.35
3119 3425 3.576550 GGAGGATCAAGAGGGAGTATGAC 59.423 52.174 0.00 0.00 36.25 3.06
3128 3434 4.087182 AGAGGGAGTATGACGAGTTCAAA 58.913 43.478 0.00 0.00 37.92 2.69
3146 3452 2.686915 CAAAGTCAGGATCAATGGGCTC 59.313 50.000 0.00 0.00 0.00 4.70
3155 3461 1.225704 CAATGGGCTCCCTGACTCC 59.774 63.158 6.50 0.00 36.94 3.85
3158 3464 0.268869 ATGGGCTCCCTGACTCCATA 59.731 55.000 6.50 0.00 36.55 2.74
3383 3689 3.442977 ACATTCTCAGGCAGCATTTCTTC 59.557 43.478 0.00 0.00 0.00 2.87
3474 3780 6.541641 AGAGCTGAACCATCTTGATATTGTTC 59.458 38.462 0.00 0.00 0.00 3.18
3638 3955 5.180680 CAGTGTGTGCATATTGGGATATCTG 59.819 44.000 2.05 0.00 0.00 2.90
3738 4068 7.786030 AGCCGAGAGTTATATTATATGCACAT 58.214 34.615 0.00 0.00 0.00 3.21
3781 4111 4.415881 TTGTTGCTCTGTTCTTCAGGTA 57.584 40.909 0.00 0.00 43.76 3.08
3787 4117 4.006319 GCTCTGTTCTTCAGGTAATGCTT 58.994 43.478 0.00 0.00 43.76 3.91
3847 4177 1.283321 GAAGAAGGCAGACCCCTTGAT 59.717 52.381 0.00 0.00 45.03 2.57
3859 4189 4.082125 GACCCCTTGATTTCACTGACATT 58.918 43.478 0.00 0.00 0.00 2.71
4147 4477 1.440938 GCTACGCCAACCACAACACA 61.441 55.000 0.00 0.00 0.00 3.72
4255 4585 2.700897 ACTCTATGGATTTGACCCTCCG 59.299 50.000 0.00 0.00 34.05 4.63
5146 5479 1.227089 CCTCCTCAAGGTCATCGCG 60.227 63.158 0.00 0.00 40.67 5.87
5230 5569 1.135199 GCCGACCTCTACATCGTCAAA 60.135 52.381 0.00 0.00 36.60 2.69
5290 5629 1.522355 CAACCTCATCGCCATCGCT 60.522 57.895 0.00 0.00 35.26 4.93
5545 5884 0.548510 CCTTCCAGTTCCCCTGATCC 59.451 60.000 0.00 0.00 44.49 3.36
5594 5938 0.315886 CATTTGTTCCAGCAGCAGCA 59.684 50.000 3.17 0.00 45.49 4.41
5595 5939 0.601558 ATTTGTTCCAGCAGCAGCAG 59.398 50.000 3.17 0.00 45.49 4.24
5596 5940 2.079020 TTTGTTCCAGCAGCAGCAGC 62.079 55.000 3.17 0.46 45.49 5.25
5597 5941 2.981909 GTTCCAGCAGCAGCAGCA 60.982 61.111 12.92 0.00 45.49 4.41
5598 5942 2.671963 TTCCAGCAGCAGCAGCAG 60.672 61.111 12.92 3.65 45.49 4.24
5751 6095 2.619931 TCCTGAGATGTTTGGACCTGA 58.380 47.619 0.00 0.00 0.00 3.86
5785 6129 9.443283 CAAGTACAAAAATTCAGAAGTTCTCAG 57.557 33.333 1.26 0.00 0.00 3.35
5786 6130 8.738645 AGTACAAAAATTCAGAAGTTCTCAGT 57.261 30.769 1.26 0.00 0.00 3.41
5797 6141 5.174761 CAGAAGTTCTCAGTGAGTCTTTTCG 59.825 44.000 19.53 12.51 30.76 3.46
5839 6189 1.527034 TTGCATCTGGTTGAGTGAGC 58.473 50.000 0.00 0.00 0.00 4.26
5849 6214 2.159114 GGTTGAGTGAGCCAAAGCAAAA 60.159 45.455 0.00 0.00 43.56 2.44
5900 6385 6.630203 TCTATTTGGCTAGTCCTGGTAAAA 57.370 37.500 0.00 0.00 35.26 1.52
5949 6503 7.721842 TGTTGATTTATGTTCAGTTTGGACCTA 59.278 33.333 0.00 0.00 0.00 3.08
5957 6511 4.974645 TCAGTTTGGACCTAGACAACAT 57.025 40.909 0.00 0.00 0.00 2.71
5958 6512 4.894784 TCAGTTTGGACCTAGACAACATC 58.105 43.478 0.00 0.00 0.00 3.06
6048 6608 7.868415 CCTCCCTCAGTTCTTAAATATAAGACG 59.132 40.741 0.00 0.00 45.52 4.18
6093 6653 7.803724 ACTGACAAAACGTCTTATATTTGACC 58.196 34.615 13.50 6.70 45.60 4.02
6139 6699 4.439305 TCTTGCCTTTATGTGTTGCATC 57.561 40.909 0.00 0.00 38.94 3.91
6142 6702 2.094597 TGCCTTTATGTGTTGCATCTGC 60.095 45.455 0.00 0.00 38.94 4.26
6147 6707 1.563924 ATGTGTTGCATCTGCCCATT 58.436 45.000 0.00 0.00 41.18 3.16
6153 6713 0.901114 TGCATCTGCCCATTGTGCTT 60.901 50.000 0.00 0.00 41.18 3.91
6180 6740 4.420168 TGCAAGAACTTTTCAAAAGGTCG 58.580 39.130 19.99 9.78 38.93 4.79
6234 6797 4.469945 ACCAGGTAGTAGCATATGTGTTGT 59.530 41.667 4.29 0.00 0.00 3.32
6248 6811 1.117994 TGTTGTTGGCTTTGGCATGA 58.882 45.000 0.00 0.00 38.08 3.07
6308 6871 0.538287 ACTTGAGTTCAGCCTTGGCC 60.538 55.000 8.17 0.00 0.00 5.36
6311 6874 1.676967 GAGTTCAGCCTTGGCCTGG 60.677 63.158 3.32 7.74 0.00 4.45
6317 6880 2.344872 GCCTTGGCCTGGCTTTTG 59.655 61.111 26.09 6.55 46.38 2.44
6318 6881 2.510551 GCCTTGGCCTGGCTTTTGT 61.511 57.895 26.09 0.00 46.38 2.83
6319 6882 2.043604 GCCTTGGCCTGGCTTTTGTT 62.044 55.000 26.09 0.00 46.38 2.83
6320 6883 0.249996 CCTTGGCCTGGCTTTTGTTG 60.250 55.000 19.68 2.43 0.00 3.33
6321 6884 0.465287 CTTGGCCTGGCTTTTGTTGT 59.535 50.000 19.68 0.00 0.00 3.32
6322 6885 1.686052 CTTGGCCTGGCTTTTGTTGTA 59.314 47.619 19.68 0.00 0.00 2.41
6323 6886 1.781786 TGGCCTGGCTTTTGTTGTAA 58.218 45.000 19.68 0.00 0.00 2.41
6324 6887 1.686052 TGGCCTGGCTTTTGTTGTAAG 59.314 47.619 19.68 0.00 0.00 2.34
6325 6888 1.686587 GGCCTGGCTTTTGTTGTAAGT 59.313 47.619 19.68 0.00 0.00 2.24
6326 6889 2.102420 GGCCTGGCTTTTGTTGTAAGTT 59.898 45.455 19.68 0.00 0.00 2.66
6327 6890 3.319689 GGCCTGGCTTTTGTTGTAAGTTA 59.680 43.478 19.68 0.00 0.00 2.24
6328 6891 4.546570 GCCTGGCTTTTGTTGTAAGTTAG 58.453 43.478 12.43 0.00 0.00 2.34
6329 6892 4.037565 GCCTGGCTTTTGTTGTAAGTTAGT 59.962 41.667 12.43 0.00 0.00 2.24
6330 6893 5.519722 CCTGGCTTTTGTTGTAAGTTAGTG 58.480 41.667 0.00 0.00 0.00 2.74
6331 6894 5.298276 CCTGGCTTTTGTTGTAAGTTAGTGA 59.702 40.000 0.00 0.00 0.00 3.41
6332 6895 6.183360 CCTGGCTTTTGTTGTAAGTTAGTGAA 60.183 38.462 0.00 0.00 0.00 3.18
6333 6896 7.341445 TGGCTTTTGTTGTAAGTTAGTGAAT 57.659 32.000 0.00 0.00 0.00 2.57
6352 6915 8.894768 AGTGAATGCTTTAGGTGATAGATTAC 57.105 34.615 0.00 0.00 0.00 1.89
6388 6951 6.455647 GTCGTTGATAGGTGATTGATGGATA 58.544 40.000 0.00 0.00 0.00 2.59
6394 6957 6.558394 TGATAGGTGATTGATGGATAAGGACA 59.442 38.462 0.00 0.00 0.00 4.02
6396 6959 4.723789 AGGTGATTGATGGATAAGGACACT 59.276 41.667 0.00 0.00 0.00 3.55
6405 6968 4.026744 TGGATAAGGACACTTGGAGAGAG 58.973 47.826 0.00 0.00 37.53 3.20
6407 6970 4.098807 GGATAAGGACACTTGGAGAGAGAC 59.901 50.000 0.00 0.00 37.53 3.36
6415 6978 3.513119 CACTTGGAGAGAGACAGATGGAA 59.487 47.826 0.00 0.00 0.00 3.53
6416 6979 4.020751 CACTTGGAGAGAGACAGATGGAAA 60.021 45.833 0.00 0.00 0.00 3.13
6417 6980 4.594920 ACTTGGAGAGAGACAGATGGAAAA 59.405 41.667 0.00 0.00 0.00 2.29
6419 6982 4.899502 TGGAGAGAGACAGATGGAAAAAC 58.100 43.478 0.00 0.00 0.00 2.43
6421 6984 4.693095 GGAGAGAGACAGATGGAAAAACAC 59.307 45.833 0.00 0.00 0.00 3.32
6422 6985 4.310769 AGAGAGACAGATGGAAAAACACG 58.689 43.478 0.00 0.00 0.00 4.49
6423 6986 3.403038 AGAGACAGATGGAAAAACACGG 58.597 45.455 0.00 0.00 0.00 4.94
6432 6997 3.750371 TGGAAAAACACGGACTGATGAT 58.250 40.909 0.00 0.00 0.00 2.45
6442 7007 2.350804 CGGACTGATGATGACAAGCAAG 59.649 50.000 0.00 0.00 0.00 4.01
6443 7008 3.603532 GGACTGATGATGACAAGCAAGA 58.396 45.455 0.00 0.00 0.00 3.02
6444 7009 4.005650 GGACTGATGATGACAAGCAAGAA 58.994 43.478 0.00 0.00 0.00 2.52
6447 7012 6.349944 GGACTGATGATGACAAGCAAGAAAAT 60.350 38.462 0.00 0.00 0.00 1.82
6448 7013 7.148188 GGACTGATGATGACAAGCAAGAAAATA 60.148 37.037 0.00 0.00 0.00 1.40
6449 7014 8.114331 ACTGATGATGACAAGCAAGAAAATAA 57.886 30.769 0.00 0.00 0.00 1.40
6450 7015 8.242053 ACTGATGATGACAAGCAAGAAAATAAG 58.758 33.333 0.00 0.00 0.00 1.73
6452 7017 8.963725 TGATGATGACAAGCAAGAAAATAAGAT 58.036 29.630 0.00 0.00 0.00 2.40
6453 7018 9.234384 GATGATGACAAGCAAGAAAATAAGATG 57.766 33.333 0.00 0.00 0.00 2.90
6455 7020 8.963725 TGATGACAAGCAAGAAAATAAGATGAT 58.036 29.630 0.00 0.00 0.00 2.45
6456 7021 9.798994 GATGACAAGCAAGAAAATAAGATGATT 57.201 29.630 0.00 0.00 0.00 2.57
6459 7024 9.415544 GACAAGCAAGAAAATAAGATGATTTGT 57.584 29.630 0.00 0.00 0.00 2.83
6460 7025 9.768662 ACAAGCAAGAAAATAAGATGATTTGTT 57.231 25.926 0.00 0.00 0.00 2.83
6469 7040 3.302365 AGATGATTTGTTGTTTGGCCG 57.698 42.857 0.00 0.00 0.00 6.13
6503 7074 5.689068 GTCAAAGTCTTTTCAGCAAATCCTG 59.311 40.000 0.00 0.00 0.00 3.86
6506 7077 3.823304 AGTCTTTTCAGCAAATCCTGACC 59.177 43.478 0.00 0.00 41.28 4.02
6510 7081 1.808411 TCAGCAAATCCTGACCGTTC 58.192 50.000 0.00 0.00 36.96 3.95
6517 7088 1.424638 ATCCTGACCGTTCCCTATGG 58.575 55.000 0.00 0.00 39.00 2.74
6532 7103 6.147437 TCCCTATGGTTGAATTAGGTGTTT 57.853 37.500 0.00 0.00 0.00 2.83
6534 7105 6.661805 TCCCTATGGTTGAATTAGGTGTTTTC 59.338 38.462 0.00 0.00 0.00 2.29
6536 7107 7.148069 CCCTATGGTTGAATTAGGTGTTTTCTC 60.148 40.741 0.00 0.00 0.00 2.87
6537 7108 7.611855 CCTATGGTTGAATTAGGTGTTTTCTCT 59.388 37.037 0.00 0.00 0.00 3.10
6539 7110 7.038154 TGGTTGAATTAGGTGTTTTCTCTTG 57.962 36.000 0.00 0.00 0.00 3.02
6540 7111 6.605594 TGGTTGAATTAGGTGTTTTCTCTTGT 59.394 34.615 0.00 0.00 0.00 3.16
6541 7112 6.918022 GGTTGAATTAGGTGTTTTCTCTTGTG 59.082 38.462 0.00 0.00 0.00 3.33
6542 7113 7.416326 GGTTGAATTAGGTGTTTTCTCTTGTGT 60.416 37.037 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.167908 CATCGCCTTTTACAAGCGCA 59.832 50.000 11.47 0.00 32.72 6.09
1 2 1.133946 GCATCGCCTTTTACAAGCGC 61.134 55.000 0.00 0.00 32.72 5.92
2 3 0.523335 GGCATCGCCTTTTACAAGCG 60.523 55.000 0.00 0.00 46.69 4.68
3 4 3.329114 GGCATCGCCTTTTACAAGC 57.671 52.632 0.00 0.00 46.69 4.01
17 18 4.760047 AAGCGCGGTCTTCGGCAT 62.760 61.111 12.91 0.00 39.38 4.40
21 22 4.735132 TCCCAAGCGCGGTCTTCG 62.735 66.667 12.91 0.00 42.76 3.79
22 23 2.358247 TTCCCAAGCGCGGTCTTC 60.358 61.111 12.91 0.00 0.00 2.87
23 24 2.358737 CTTCCCAAGCGCGGTCTT 60.359 61.111 12.91 1.33 0.00 3.01
24 25 4.394712 CCTTCCCAAGCGCGGTCT 62.395 66.667 12.91 0.00 0.00 3.85
64 65 3.896133 TATCGTCTCCCGCGTGGC 61.896 66.667 10.27 0.00 36.19 5.01
65 66 2.025727 GTATCGTCTCCCGCGTGG 59.974 66.667 8.42 8.42 36.19 4.94
66 67 2.352001 CGTATCGTCTCCCGCGTG 60.352 66.667 4.92 0.00 36.19 5.34
67 68 2.512286 TCGTATCGTCTCCCGCGT 60.512 61.111 4.92 0.00 36.19 6.01
68 69 2.248724 CTCGTATCGTCTCCCGCG 59.751 66.667 0.00 0.00 36.19 6.46
69 70 2.051166 GCTCGTATCGTCTCCCGC 60.051 66.667 0.00 0.00 36.19 6.13
70 71 2.119147 CTGGCTCGTATCGTCTCCCG 62.119 65.000 0.00 0.00 38.13 5.14
71 72 0.818445 TCTGGCTCGTATCGTCTCCC 60.818 60.000 0.00 0.00 0.00 4.30
72 73 1.198178 GATCTGGCTCGTATCGTCTCC 59.802 57.143 0.00 0.00 0.00 3.71
73 74 1.136197 CGATCTGGCTCGTATCGTCTC 60.136 57.143 0.00 0.00 38.12 3.36
74 75 0.869068 CGATCTGGCTCGTATCGTCT 59.131 55.000 0.00 0.00 38.12 4.18
75 76 0.866427 TCGATCTGGCTCGTATCGTC 59.134 55.000 0.00 0.00 42.32 4.20
76 77 0.869068 CTCGATCTGGCTCGTATCGT 59.131 55.000 0.00 0.00 42.32 3.73
77 78 0.453615 GCTCGATCTGGCTCGTATCG 60.454 60.000 0.00 0.00 42.90 2.92
78 79 0.453615 CGCTCGATCTGGCTCGTATC 60.454 60.000 0.00 0.00 39.62 2.24
79 80 1.576920 CGCTCGATCTGGCTCGTAT 59.423 57.895 0.00 0.00 39.62 3.06
80 81 2.543802 CCGCTCGATCTGGCTCGTA 61.544 63.158 0.00 0.00 39.62 3.43
81 82 3.893763 CCGCTCGATCTGGCTCGT 61.894 66.667 0.00 0.00 39.62 4.18
103 104 3.764466 AGAACGAGCGGCCAGGAG 61.764 66.667 2.24 0.00 0.00 3.69
104 105 4.069232 CAGAACGAGCGGCCAGGA 62.069 66.667 2.24 0.00 0.00 3.86
105 106 4.379243 ACAGAACGAGCGGCCAGG 62.379 66.667 2.24 0.00 0.00 4.45
106 107 2.811317 GACAGAACGAGCGGCCAG 60.811 66.667 2.24 0.00 0.00 4.85
107 108 4.373116 GGACAGAACGAGCGGCCA 62.373 66.667 2.24 0.00 0.00 5.36
108 109 3.876589 TTGGACAGAACGAGCGGCC 62.877 63.158 0.00 0.00 0.00 6.13
109 110 1.298859 ATTTGGACAGAACGAGCGGC 61.299 55.000 0.00 0.00 0.00 6.53
110 111 1.927174 CTATTTGGACAGAACGAGCGG 59.073 52.381 0.00 0.00 0.00 5.52
111 112 2.345641 CACTATTTGGACAGAACGAGCG 59.654 50.000 0.00 0.00 0.00 5.03
112 113 2.094417 GCACTATTTGGACAGAACGAGC 59.906 50.000 0.00 0.00 0.00 5.03
113 114 2.345641 CGCACTATTTGGACAGAACGAG 59.654 50.000 0.00 0.00 0.00 4.18
114 115 2.288579 ACGCACTATTTGGACAGAACGA 60.289 45.455 0.00 0.00 0.00 3.85
115 116 2.066262 ACGCACTATTTGGACAGAACG 58.934 47.619 0.00 0.00 0.00 3.95
116 117 4.494199 GCATACGCACTATTTGGACAGAAC 60.494 45.833 0.00 0.00 38.36 3.01
117 118 3.621268 GCATACGCACTATTTGGACAGAA 59.379 43.478 0.00 0.00 38.36 3.02
118 119 3.194861 GCATACGCACTATTTGGACAGA 58.805 45.455 0.00 0.00 38.36 3.41
119 120 2.935849 TGCATACGCACTATTTGGACAG 59.064 45.455 0.00 0.00 45.36 3.51
120 121 2.979240 TGCATACGCACTATTTGGACA 58.021 42.857 0.00 0.00 45.36 4.02
132 133 7.248437 ACCTAAAATCTAAAAAGTGCATACGC 58.752 34.615 0.00 0.00 39.24 4.42
133 134 9.620660 AAACCTAAAATCTAAAAAGTGCATACG 57.379 29.630 0.00 0.00 0.00 3.06
162 163 5.935206 GGAAAAGTCCAAGGTTTGTCAAAAA 59.065 36.000 0.00 0.00 44.26 1.94
163 164 5.483811 GGAAAAGTCCAAGGTTTGTCAAAA 58.516 37.500 0.00 0.00 44.26 2.44
164 165 5.079689 GGAAAAGTCCAAGGTTTGTCAAA 57.920 39.130 0.00 0.00 44.26 2.69
165 166 4.729227 GGAAAAGTCCAAGGTTTGTCAA 57.271 40.909 0.00 0.00 44.26 3.18
193 194 3.316868 CGCCTTAGTCAACAAGGGAAAAA 59.683 43.478 3.47 0.00 42.47 1.94
194 195 2.882137 CGCCTTAGTCAACAAGGGAAAA 59.118 45.455 3.47 0.00 42.47 2.29
195 196 2.500229 CGCCTTAGTCAACAAGGGAAA 58.500 47.619 3.47 0.00 42.47 3.13
196 197 1.271163 CCGCCTTAGTCAACAAGGGAA 60.271 52.381 3.47 0.00 42.47 3.97
197 198 0.323629 CCGCCTTAGTCAACAAGGGA 59.676 55.000 3.47 0.00 42.47 4.20
198 199 0.323629 TCCGCCTTAGTCAACAAGGG 59.676 55.000 3.47 0.00 42.47 3.95
199 200 1.439679 GTCCGCCTTAGTCAACAAGG 58.560 55.000 0.00 0.00 44.61 3.61
200 201 1.068474 CGTCCGCCTTAGTCAACAAG 58.932 55.000 0.00 0.00 0.00 3.16
201 202 0.947180 GCGTCCGCCTTAGTCAACAA 60.947 55.000 0.00 0.00 34.56 2.83
202 203 1.373748 GCGTCCGCCTTAGTCAACA 60.374 57.895 0.00 0.00 34.56 3.33
203 204 3.471399 GCGTCCGCCTTAGTCAAC 58.529 61.111 0.00 0.00 34.56 3.18
213 214 1.436983 CTCCCTAAAATGGCGTCCGC 61.437 60.000 2.45 2.45 41.06 5.54
214 215 0.814010 CCTCCCTAAAATGGCGTCCG 60.814 60.000 0.00 0.00 0.00 4.79
215 216 0.465642 CCCTCCCTAAAATGGCGTCC 60.466 60.000 0.00 0.00 0.00 4.79
216 217 0.465642 CCCCTCCCTAAAATGGCGTC 60.466 60.000 0.00 0.00 0.00 5.19
217 218 0.917333 TCCCCTCCCTAAAATGGCGT 60.917 55.000 0.00 0.00 0.00 5.68
218 219 0.465642 GTCCCCTCCCTAAAATGGCG 60.466 60.000 0.00 0.00 0.00 5.69
219 220 0.629058 TGTCCCCTCCCTAAAATGGC 59.371 55.000 0.00 0.00 0.00 4.40
220 221 1.410224 GCTGTCCCCTCCCTAAAATGG 60.410 57.143 0.00 0.00 0.00 3.16
221 222 1.566231 AGCTGTCCCCTCCCTAAAATG 59.434 52.381 0.00 0.00 0.00 2.32
222 223 1.987080 AGCTGTCCCCTCCCTAAAAT 58.013 50.000 0.00 0.00 0.00 1.82
223 224 1.755200 AAGCTGTCCCCTCCCTAAAA 58.245 50.000 0.00 0.00 0.00 1.52
224 225 1.755200 AAAGCTGTCCCCTCCCTAAA 58.245 50.000 0.00 0.00 0.00 1.85
225 226 1.633945 GAAAAGCTGTCCCCTCCCTAA 59.366 52.381 0.00 0.00 0.00 2.69
226 227 1.203440 AGAAAAGCTGTCCCCTCCCTA 60.203 52.381 0.00 0.00 0.00 3.53
227 228 0.476611 AGAAAAGCTGTCCCCTCCCT 60.477 55.000 0.00 0.00 0.00 4.20
228 229 0.034960 GAGAAAAGCTGTCCCCTCCC 60.035 60.000 0.00 0.00 0.00 4.30
229 230 0.034960 GGAGAAAAGCTGTCCCCTCC 60.035 60.000 4.72 4.72 30.86 4.30
230 231 0.693049 TGGAGAAAAGCTGTCCCCTC 59.307 55.000 0.00 0.00 36.61 4.30
231 232 0.402121 GTGGAGAAAAGCTGTCCCCT 59.598 55.000 0.00 0.00 36.61 4.79
232 233 0.609406 GGTGGAGAAAAGCTGTCCCC 60.609 60.000 0.00 0.00 36.61 4.81
233 234 0.609406 GGGTGGAGAAAAGCTGTCCC 60.609 60.000 0.00 0.00 36.61 4.46
234 235 0.609406 GGGGTGGAGAAAAGCTGTCC 60.609 60.000 0.00 0.00 38.02 4.02
235 236 0.110486 TGGGGTGGAGAAAAGCTGTC 59.890 55.000 0.00 0.00 0.00 3.51
236 237 0.779997 ATGGGGTGGAGAAAAGCTGT 59.220 50.000 0.00 0.00 0.00 4.40
237 238 1.180029 CATGGGGTGGAGAAAAGCTG 58.820 55.000 0.00 0.00 0.00 4.24
238 239 0.613012 GCATGGGGTGGAGAAAAGCT 60.613 55.000 0.00 0.00 0.00 3.74
239 240 0.899717 TGCATGGGGTGGAGAAAAGC 60.900 55.000 0.00 0.00 0.00 3.51
240 241 1.631405 TTGCATGGGGTGGAGAAAAG 58.369 50.000 0.00 0.00 0.00 2.27
241 242 1.691434 GTTTGCATGGGGTGGAGAAAA 59.309 47.619 0.00 0.00 0.00 2.29
242 243 1.337118 GTTTGCATGGGGTGGAGAAA 58.663 50.000 0.00 0.00 0.00 2.52
243 244 0.187117 TGTTTGCATGGGGTGGAGAA 59.813 50.000 0.00 0.00 0.00 2.87
244 245 0.187117 TTGTTTGCATGGGGTGGAGA 59.813 50.000 0.00 0.00 0.00 3.71
245 246 1.047002 TTTGTTTGCATGGGGTGGAG 58.953 50.000 0.00 0.00 0.00 3.86
246 247 0.755686 GTTTGTTTGCATGGGGTGGA 59.244 50.000 0.00 0.00 0.00 4.02
247 248 0.250252 GGTTTGTTTGCATGGGGTGG 60.250 55.000 0.00 0.00 0.00 4.61
248 249 0.467384 TGGTTTGTTTGCATGGGGTG 59.533 50.000 0.00 0.00 0.00 4.61
249 250 0.758123 CTGGTTTGTTTGCATGGGGT 59.242 50.000 0.00 0.00 0.00 4.95
250 251 1.001181 CTCTGGTTTGTTTGCATGGGG 59.999 52.381 0.00 0.00 0.00 4.96
251 252 1.606224 GCTCTGGTTTGTTTGCATGGG 60.606 52.381 0.00 0.00 0.00 4.00
252 253 1.606224 GGCTCTGGTTTGTTTGCATGG 60.606 52.381 0.00 0.00 0.00 3.66
253 254 1.068895 TGGCTCTGGTTTGTTTGCATG 59.931 47.619 0.00 0.00 0.00 4.06
254 255 1.412079 TGGCTCTGGTTTGTTTGCAT 58.588 45.000 0.00 0.00 0.00 3.96
255 256 1.189752 TTGGCTCTGGTTTGTTTGCA 58.810 45.000 0.00 0.00 0.00 4.08
256 257 2.307934 TTTGGCTCTGGTTTGTTTGC 57.692 45.000 0.00 0.00 0.00 3.68
257 258 4.502962 TCTTTTTGGCTCTGGTTTGTTTG 58.497 39.130 0.00 0.00 0.00 2.93
258 259 4.817318 TCTTTTTGGCTCTGGTTTGTTT 57.183 36.364 0.00 0.00 0.00 2.83
259 260 4.758688 CTTCTTTTTGGCTCTGGTTTGTT 58.241 39.130 0.00 0.00 0.00 2.83
260 261 3.430790 GCTTCTTTTTGGCTCTGGTTTGT 60.431 43.478 0.00 0.00 0.00 2.83
261 262 3.126073 GCTTCTTTTTGGCTCTGGTTTG 58.874 45.455 0.00 0.00 0.00 2.93
262 263 3.033909 AGCTTCTTTTTGGCTCTGGTTT 58.966 40.909 0.00 0.00 0.00 3.27
263 264 2.670939 AGCTTCTTTTTGGCTCTGGTT 58.329 42.857 0.00 0.00 0.00 3.67
264 265 2.371658 AGCTTCTTTTTGGCTCTGGT 57.628 45.000 0.00 0.00 0.00 4.00
265 266 3.740631 AAAGCTTCTTTTTGGCTCTGG 57.259 42.857 0.00 0.00 35.06 3.86
285 286 1.280998 GGAGGGAGGGATGACGAAAAA 59.719 52.381 0.00 0.00 0.00 1.94
286 287 0.909623 GGAGGGAGGGATGACGAAAA 59.090 55.000 0.00 0.00 0.00 2.29
287 288 0.252513 TGGAGGGAGGGATGACGAAA 60.253 55.000 0.00 0.00 0.00 3.46
288 289 0.031111 ATGGAGGGAGGGATGACGAA 60.031 55.000 0.00 0.00 0.00 3.85
289 290 0.470080 GATGGAGGGAGGGATGACGA 60.470 60.000 0.00 0.00 0.00 4.20
290 291 0.760567 TGATGGAGGGAGGGATGACG 60.761 60.000 0.00 0.00 0.00 4.35
291 292 1.627834 GATGATGGAGGGAGGGATGAC 59.372 57.143 0.00 0.00 0.00 3.06
292 293 1.511299 AGATGATGGAGGGAGGGATGA 59.489 52.381 0.00 0.00 0.00 2.92
293 294 1.629353 CAGATGATGGAGGGAGGGATG 59.371 57.143 0.00 0.00 0.00 3.51
294 295 2.041824 CAGATGATGGAGGGAGGGAT 57.958 55.000 0.00 0.00 0.00 3.85
295 296 0.765903 GCAGATGATGGAGGGAGGGA 60.766 60.000 0.00 0.00 0.00 4.20
296 297 1.058428 TGCAGATGATGGAGGGAGGG 61.058 60.000 0.00 0.00 0.00 4.30
297 298 0.841961 TTGCAGATGATGGAGGGAGG 59.158 55.000 0.00 0.00 0.00 4.30
298 299 2.723322 TTTGCAGATGATGGAGGGAG 57.277 50.000 0.00 0.00 0.00 4.30
299 300 3.454719 TTTTTGCAGATGATGGAGGGA 57.545 42.857 0.00 0.00 0.00 4.20
318 319 9.093970 CGACCTTTTCTTTTTGGTTCTTTATTT 57.906 29.630 0.00 0.00 32.30 1.40
319 320 8.255206 ACGACCTTTTCTTTTTGGTTCTTTATT 58.745 29.630 0.00 0.00 32.30 1.40
320 321 7.778083 ACGACCTTTTCTTTTTGGTTCTTTAT 58.222 30.769 0.00 0.00 32.30 1.40
321 322 7.160547 ACGACCTTTTCTTTTTGGTTCTTTA 57.839 32.000 0.00 0.00 32.30 1.85
322 323 6.032956 ACGACCTTTTCTTTTTGGTTCTTT 57.967 33.333 0.00 0.00 32.30 2.52
323 324 5.654603 ACGACCTTTTCTTTTTGGTTCTT 57.345 34.783 0.00 0.00 32.30 2.52
324 325 5.654603 AACGACCTTTTCTTTTTGGTTCT 57.345 34.783 0.00 0.00 32.30 3.01
325 326 5.865013 TCAAACGACCTTTTCTTTTTGGTTC 59.135 36.000 0.00 0.00 32.30 3.62
326 327 5.785243 TCAAACGACCTTTTCTTTTTGGTT 58.215 33.333 0.00 0.00 32.30 3.67
327 328 5.394224 TCAAACGACCTTTTCTTTTTGGT 57.606 34.783 0.00 0.00 35.23 3.67
328 329 6.367695 AGTTTCAAACGACCTTTTCTTTTTGG 59.632 34.615 0.00 0.00 36.23 3.28
329 330 7.346208 AGTTTCAAACGACCTTTTCTTTTTG 57.654 32.000 0.00 0.00 36.23 2.44
330 331 7.956420 AAGTTTCAAACGACCTTTTCTTTTT 57.044 28.000 0.00 0.00 36.23 1.94
331 332 7.956420 AAAGTTTCAAACGACCTTTTCTTTT 57.044 28.000 0.00 0.00 36.23 2.27
332 333 7.956420 AAAAGTTTCAAACGACCTTTTCTTT 57.044 28.000 0.00 0.00 36.23 2.52
333 334 7.095397 CCAAAAAGTTTCAAACGACCTTTTCTT 60.095 33.333 0.00 0.00 36.23 2.52
334 335 6.367695 CCAAAAAGTTTCAAACGACCTTTTCT 59.632 34.615 0.00 0.00 36.23 2.52
335 336 6.530567 CCAAAAAGTTTCAAACGACCTTTTC 58.469 36.000 0.00 0.00 36.23 2.29
336 337 5.106869 GCCAAAAAGTTTCAAACGACCTTTT 60.107 36.000 0.00 0.00 36.23 2.27
337 338 4.390603 GCCAAAAAGTTTCAAACGACCTTT 59.609 37.500 0.00 0.00 36.23 3.11
338 339 3.930229 GCCAAAAAGTTTCAAACGACCTT 59.070 39.130 0.00 0.00 36.23 3.50
339 340 3.194755 AGCCAAAAAGTTTCAAACGACCT 59.805 39.130 0.00 0.00 36.23 3.85
340 341 3.517602 AGCCAAAAAGTTTCAAACGACC 58.482 40.909 0.00 0.00 36.23 4.79
341 342 3.550275 GGAGCCAAAAAGTTTCAAACGAC 59.450 43.478 0.00 0.00 36.23 4.34
342 343 3.429684 GGGAGCCAAAAAGTTTCAAACGA 60.430 43.478 0.00 0.00 36.23 3.85
343 344 2.863740 GGGAGCCAAAAAGTTTCAAACG 59.136 45.455 0.00 0.00 36.23 3.60
344 345 3.202906 GGGGAGCCAAAAAGTTTCAAAC 58.797 45.455 0.00 0.00 0.00 2.93
345 346 2.171659 GGGGGAGCCAAAAAGTTTCAAA 59.828 45.455 0.00 0.00 0.00 2.69
346 347 1.765904 GGGGGAGCCAAAAAGTTTCAA 59.234 47.619 0.00 0.00 0.00 2.69
347 348 1.343478 TGGGGGAGCCAAAAAGTTTCA 60.343 47.619 0.00 0.00 0.00 2.69
348 349 1.419381 TGGGGGAGCCAAAAAGTTTC 58.581 50.000 0.00 0.00 0.00 2.78
349 350 1.699083 CATGGGGGAGCCAAAAAGTTT 59.301 47.619 0.00 0.00 0.00 2.66
350 351 1.351076 CATGGGGGAGCCAAAAAGTT 58.649 50.000 0.00 0.00 0.00 2.66
351 352 1.194121 GCATGGGGGAGCCAAAAAGT 61.194 55.000 0.00 0.00 0.00 2.66
352 353 1.598517 GCATGGGGGAGCCAAAAAG 59.401 57.895 0.00 0.00 0.00 2.27
353 354 3.804490 GCATGGGGGAGCCAAAAA 58.196 55.556 0.00 0.00 0.00 1.94
359 360 4.147587 ACATGGGCATGGGGGAGC 62.148 66.667 0.00 0.00 42.91 4.70
360 361 2.123597 CACATGGGCATGGGGGAG 60.124 66.667 0.00 0.00 42.91 4.30
373 374 0.257039 GGAAGAGGTCATGGCCACAT 59.743 55.000 20.74 4.87 37.99 3.21
374 375 1.685224 GGAAGAGGTCATGGCCACA 59.315 57.895 20.74 0.00 0.00 4.17
375 376 1.077429 GGGAAGAGGTCATGGCCAC 60.077 63.158 20.74 13.20 0.00 5.01
376 377 2.308722 GGGGAAGAGGTCATGGCCA 61.309 63.158 20.74 8.56 0.00 5.36
377 378 1.988982 GAGGGGAAGAGGTCATGGCC 61.989 65.000 8.79 8.79 0.00 5.36
378 379 1.274703 TGAGGGGAAGAGGTCATGGC 61.275 60.000 0.00 0.00 0.00 4.40
379 380 0.543749 GTGAGGGGAAGAGGTCATGG 59.456 60.000 0.00 0.00 0.00 3.66
380 381 1.065854 GTGTGAGGGGAAGAGGTCATG 60.066 57.143 0.00 0.00 0.00 3.07
381 382 1.203364 AGTGTGAGGGGAAGAGGTCAT 60.203 52.381 0.00 0.00 0.00 3.06
382 383 0.191064 AGTGTGAGGGGAAGAGGTCA 59.809 55.000 0.00 0.00 0.00 4.02
383 384 0.899019 GAGTGTGAGGGGAAGAGGTC 59.101 60.000 0.00 0.00 0.00 3.85
384 385 0.489567 AGAGTGTGAGGGGAAGAGGT 59.510 55.000 0.00 0.00 0.00 3.85
385 386 1.552792 GAAGAGTGTGAGGGGAAGAGG 59.447 57.143 0.00 0.00 0.00 3.69
386 387 1.552792 GGAAGAGTGTGAGGGGAAGAG 59.447 57.143 0.00 0.00 0.00 2.85
387 388 1.645710 GGAAGAGTGTGAGGGGAAGA 58.354 55.000 0.00 0.00 0.00 2.87
388 389 0.615850 GGGAAGAGTGTGAGGGGAAG 59.384 60.000 0.00 0.00 0.00 3.46
389 390 0.193574 AGGGAAGAGTGTGAGGGGAA 59.806 55.000 0.00 0.00 0.00 3.97
390 391 0.193574 AAGGGAAGAGTGTGAGGGGA 59.806 55.000 0.00 0.00 0.00 4.81
391 392 0.615850 GAAGGGAAGAGTGTGAGGGG 59.384 60.000 0.00 0.00 0.00 4.79
392 393 0.615850 GGAAGGGAAGAGTGTGAGGG 59.384 60.000 0.00 0.00 0.00 4.30
393 394 0.615850 GGGAAGGGAAGAGTGTGAGG 59.384 60.000 0.00 0.00 0.00 3.86
394 395 1.002544 GTGGGAAGGGAAGAGTGTGAG 59.997 57.143 0.00 0.00 0.00 3.51
395 396 1.056660 GTGGGAAGGGAAGAGTGTGA 58.943 55.000 0.00 0.00 0.00 3.58
396 397 1.059913 AGTGGGAAGGGAAGAGTGTG 58.940 55.000 0.00 0.00 0.00 3.82
397 398 1.059913 CAGTGGGAAGGGAAGAGTGT 58.940 55.000 0.00 0.00 0.00 3.55
398 399 0.322008 GCAGTGGGAAGGGAAGAGTG 60.322 60.000 0.00 0.00 0.00 3.51
399 400 0.474660 AGCAGTGGGAAGGGAAGAGT 60.475 55.000 0.00 0.00 0.00 3.24
400 401 1.208293 GTAGCAGTGGGAAGGGAAGAG 59.792 57.143 0.00 0.00 0.00 2.85
401 402 1.276622 GTAGCAGTGGGAAGGGAAGA 58.723 55.000 0.00 0.00 0.00 2.87
402 403 0.253327 GGTAGCAGTGGGAAGGGAAG 59.747 60.000 0.00 0.00 0.00 3.46
403 404 0.474854 TGGTAGCAGTGGGAAGGGAA 60.475 55.000 0.00 0.00 0.00 3.97
404 405 0.909610 CTGGTAGCAGTGGGAAGGGA 60.910 60.000 13.89 0.00 0.00 4.20
405 406 1.201429 ACTGGTAGCAGTGGGAAGGG 61.201 60.000 26.01 0.00 33.58 3.95
406 407 0.693049 AACTGGTAGCAGTGGGAAGG 59.307 55.000 27.15 0.00 35.30 3.46
407 408 1.339151 GGAACTGGTAGCAGTGGGAAG 60.339 57.143 27.15 0.76 35.30 3.46
408 409 0.690762 GGAACTGGTAGCAGTGGGAA 59.309 55.000 27.15 0.00 35.30 3.97
409 410 0.178903 AGGAACTGGTAGCAGTGGGA 60.179 55.000 27.15 0.00 37.18 4.37
410 411 0.250513 GAGGAACTGGTAGCAGTGGG 59.749 60.000 27.15 2.70 41.55 4.61
411 412 0.108615 CGAGGAACTGGTAGCAGTGG 60.109 60.000 27.15 11.19 41.55 4.00
412 413 0.737715 GCGAGGAACTGGTAGCAGTG 60.738 60.000 27.15 15.42 41.55 3.66
413 414 1.592223 GCGAGGAACTGGTAGCAGT 59.408 57.895 21.62 21.62 41.55 4.40
414 415 1.153549 GGCGAGGAACTGGTAGCAG 60.154 63.158 20.16 20.16 41.55 4.24
415 416 1.888436 CTGGCGAGGAACTGGTAGCA 61.888 60.000 0.00 0.00 41.55 3.49
416 417 1.153549 CTGGCGAGGAACTGGTAGC 60.154 63.158 0.00 0.00 41.55 3.58
440 441 4.348495 AAGGCGGAAGGGGAGGGA 62.348 66.667 0.00 0.00 0.00 4.20
443 444 2.689034 AGGAAGGCGGAAGGGGAG 60.689 66.667 0.00 0.00 0.00 4.30
444 445 3.009115 CAGGAAGGCGGAAGGGGA 61.009 66.667 0.00 0.00 0.00 4.81
470 471 0.766288 GGGGATTGAGGGAGGAGGAG 60.766 65.000 0.00 0.00 0.00 3.69
481 482 2.344592 ACAAGTAGTGGTGGGGATTGA 58.655 47.619 0.00 0.00 0.00 2.57
482 483 2.879103 ACAAGTAGTGGTGGGGATTG 57.121 50.000 0.00 0.00 0.00 2.67
483 484 3.518303 GAGTACAAGTAGTGGTGGGGATT 59.482 47.826 0.00 0.00 0.00 3.01
499 508 1.076485 GGTAGGGGAGGCGAGTACA 60.076 63.158 0.00 0.00 0.00 2.90
506 515 1.386057 AGGGATTGGTAGGGGAGGC 60.386 63.158 0.00 0.00 0.00 4.70
523 532 0.750911 GGGCAAGAATGAGGCTGGAG 60.751 60.000 0.00 0.00 0.00 3.86
525 534 1.755783 GGGGCAAGAATGAGGCTGG 60.756 63.158 0.00 0.00 0.00 4.85
526 535 0.750911 GAGGGGCAAGAATGAGGCTG 60.751 60.000 0.00 0.00 0.00 4.85
527 536 1.611965 GAGGGGCAAGAATGAGGCT 59.388 57.895 0.00 0.00 0.00 4.58
528 537 1.454663 GGAGGGGCAAGAATGAGGC 60.455 63.158 0.00 0.00 0.00 4.70
556 570 0.749454 AGGACGGAGCAATGAATGGC 60.749 55.000 0.00 0.00 0.00 4.40
582 613 1.283793 GGCGGGCAATGAATCGATG 59.716 57.895 0.00 0.00 0.00 3.84
599 630 1.743252 GAGGCAGTCAAAGGAGCGG 60.743 63.158 0.00 0.00 0.00 5.52
717 757 1.654023 GAGAAACAAATCCGGGCGGG 61.654 60.000 0.00 4.42 35.59 6.13
721 761 0.811281 GCAGGAGAAACAAATCCGGG 59.189 55.000 0.00 0.00 40.73 5.73
724 764 0.179189 CGCGCAGGAGAAACAAATCC 60.179 55.000 8.75 0.00 35.71 3.01
742 782 2.863153 CTTCCCGCAGCAAGAACG 59.137 61.111 0.00 0.00 0.00 3.95
822 872 7.545265 TCAAATCAAATCAAATCAAATCGGACC 59.455 33.333 0.00 0.00 0.00 4.46
894 986 6.697019 ACAAATCAGAACCGAAATCAAACTTG 59.303 34.615 0.00 0.00 0.00 3.16
895 987 6.805713 ACAAATCAGAACCGAAATCAAACTT 58.194 32.000 0.00 0.00 0.00 2.66
897 989 7.435192 AGAAACAAATCAGAACCGAAATCAAAC 59.565 33.333 0.00 0.00 0.00 2.93
964 1061 1.135170 GGATGCCTTTTCTTGAGCTGC 60.135 52.381 0.00 0.00 0.00 5.25
984 1081 1.298413 CATAGCGTCTGTCCGTCCG 60.298 63.158 0.00 0.00 0.00 4.79
993 1090 2.802057 GCCGTTGTTATCCATAGCGTCT 60.802 50.000 0.00 0.00 0.00 4.18
1848 1959 2.037144 GCATCATTCTCCTTTGGCCAT 58.963 47.619 6.09 0.00 0.00 4.40
1907 2024 3.717294 GCCCGTCAGGTCCACCAT 61.717 66.667 0.00 0.00 38.89 3.55
1930 2047 2.328099 GCTTGCTGGTGAACTCCGG 61.328 63.158 0.00 0.00 36.96 5.14
1950 2067 4.069232 CGAGTGAGCGGCCTCCAA 62.069 66.667 0.00 0.00 37.29 3.53
2015 2132 3.403038 ACATGCAGGTGTAGTGAAGTTC 58.597 45.455 1.71 0.00 0.00 3.01
2029 2146 4.915667 CAGAACATGAAACAGAACATGCAG 59.084 41.667 0.00 0.00 45.03 4.41
2041 2158 6.434965 ACATCCACATGAATCAGAACATGAAA 59.565 34.615 20.66 10.28 44.28 2.69
2140 2269 6.715347 ACCAAAGTTTGACTTTAGAAGCAT 57.285 33.333 17.33 0.00 45.84 3.79
2216 2345 7.676893 TCTCACCTAACCTCCTAGTTTATTGAA 59.323 37.037 0.00 0.00 0.00 2.69
2229 2367 6.322712 ACAGATCTAACATCTCACCTAACCTC 59.677 42.308 0.00 0.00 0.00 3.85
2369 2508 8.738199 TCTACAAAGTAGTATGAACTTGAACG 57.262 34.615 4.30 0.00 37.26 3.95
2381 2520 8.982091 ACTGAGATGCTATCTACAAAGTAGTA 57.018 34.615 4.30 0.00 40.38 1.82
2382 2521 7.889873 ACTGAGATGCTATCTACAAAGTAGT 57.110 36.000 4.30 0.00 40.38 2.73
2383 2522 9.029243 CAAACTGAGATGCTATCTACAAAGTAG 57.971 37.037 0.00 0.00 40.38 2.57
2449 2753 3.822735 CAGCAAACTCAAGGGAGAATGAA 59.177 43.478 0.00 0.00 44.26 2.57
2459 2763 5.350914 CAGGTCTTCTATCAGCAAACTCAAG 59.649 44.000 0.00 0.00 0.00 3.02
2468 2773 0.107643 GGGCCAGGTCTTCTATCAGC 59.892 60.000 4.39 0.00 0.00 4.26
2481 2787 2.425143 TCTAGAAATTGCAGGGCCAG 57.575 50.000 6.18 0.00 0.00 4.85
2484 2790 4.581824 TCATCATTCTAGAAATTGCAGGGC 59.418 41.667 9.71 0.00 0.00 5.19
2486 2792 7.273320 ACATCATCATTCTAGAAATTGCAGG 57.727 36.000 9.71 0.77 0.00 4.85
2499 2805 8.218338 AGTTAATGAACAGGACATCATCATTC 57.782 34.615 2.87 0.00 40.26 2.67
2633 2939 1.039856 AAACAACAGACATGCCCCAC 58.960 50.000 0.00 0.00 0.00 4.61
2774 3080 3.735237 GGCAGATCAGATCTTCCGTTA 57.265 47.619 12.77 0.00 37.58 3.18
2840 3146 3.823873 TGGTGTTTGCTGTAGTTAATGGG 59.176 43.478 0.00 0.00 0.00 4.00
2906 3212 1.920574 CCGTCATCAGAAACGTAGCAG 59.079 52.381 7.66 0.00 37.19 4.24
2912 3218 1.413767 CGCCTCCGTCATCAGAAACG 61.414 60.000 2.46 2.46 38.58 3.60
2933 3239 3.382546 CCATGGCTTCAAATGTAAGGAGG 59.617 47.826 0.00 0.00 0.00 4.30
2963 3269 2.223112 CCACATGTTAGCAAAGCTAGCG 60.223 50.000 9.55 0.00 43.55 4.26
3119 3425 4.093998 CCATTGATCCTGACTTTGAACTCG 59.906 45.833 0.00 0.00 0.00 4.18
3128 3434 0.842635 GGAGCCCATTGATCCTGACT 59.157 55.000 0.00 0.00 0.00 3.41
3146 3452 1.065928 GCGACGTATGGAGTCAGGG 59.934 63.158 0.00 0.00 38.46 4.45
3383 3689 8.692110 TGCAACAAATATGAAATAGCAAAGAG 57.308 30.769 0.00 0.00 28.50 2.85
3474 3780 7.406031 TCTGTCTTACTGATTACCCTAAGTG 57.594 40.000 0.00 0.00 0.00 3.16
3611 3928 2.819019 TCCCAATATGCACACACTGTTG 59.181 45.455 0.00 0.00 0.00 3.33
3781 4111 6.313519 TCATCACTAGGAGGTTTAAGCATT 57.686 37.500 0.00 0.00 0.00 3.56
3787 4117 4.077982 AGGGGATCATCACTAGGAGGTTTA 60.078 45.833 0.00 0.00 0.00 2.01
3847 4177 3.738982 ACGGATGTCAATGTCAGTGAAA 58.261 40.909 4.23 0.00 0.00 2.69
4147 4477 4.083643 CGCATGTTGACATCAAAGAAGACT 60.084 41.667 0.00 0.00 37.63 3.24
4255 4585 3.414700 CCGTGTTCTGTGGAGCGC 61.415 66.667 0.00 0.00 0.00 5.92
5146 5479 1.043816 TGAAGGAGATCTCGATGCCC 58.956 55.000 16.46 2.13 0.00 5.36
5230 5569 0.683973 GGATCATGAGCGAGGTCCAT 59.316 55.000 4.63 0.00 0.00 3.41
5610 5954 2.032965 TACTTTACTCCCCACCAGCA 57.967 50.000 0.00 0.00 0.00 4.41
5751 6095 9.868277 TTCTGAATTTTTGTACTTGATGTTGTT 57.132 25.926 0.00 0.00 0.00 2.83
5785 6129 2.224209 TGGGGACTTCGAAAAGACTCAC 60.224 50.000 0.00 0.00 36.30 3.51
5786 6130 2.043992 TGGGGACTTCGAAAAGACTCA 58.956 47.619 0.00 0.00 36.30 3.41
5797 6141 2.489722 GCAAGAAGAATGTGGGGACTTC 59.510 50.000 0.00 0.00 0.00 3.01
5849 6214 3.767131 ACAGGTAACACAAAAAGGCAAGT 59.233 39.130 0.00 0.00 41.41 3.16
5900 6385 4.651045 ACAACCAAAAAGATCAGGCTCTTT 59.349 37.500 0.00 0.00 45.16 2.52
5949 6503 8.902806 TGAATTTTTGTACTTGAGATGTTGTCT 58.097 29.630 0.00 0.00 40.81 3.41
5957 6511 8.450578 AGACATGTGAATTTTTGTACTTGAGA 57.549 30.769 1.15 0.00 0.00 3.27
6079 6639 9.694137 GTCATGGTACTAGGTCAAATATAAGAC 57.306 37.037 0.00 0.08 0.00 3.01
6093 6653 5.774498 TGCTGAGTATGTCATGGTACTAG 57.226 43.478 0.00 0.00 33.51 2.57
6139 6699 1.588082 GACCAAGCACAATGGGCAG 59.412 57.895 11.17 0.94 45.90 4.85
6142 6702 1.180456 TGCAGACCAAGCACAATGGG 61.180 55.000 0.00 0.00 42.48 4.00
6147 6707 1.408683 AGTTCTTGCAGACCAAGCACA 60.409 47.619 8.16 0.00 46.09 4.57
6153 6713 5.398603 TTTTGAAAAGTTCTTGCAGACCA 57.601 34.783 0.00 0.00 0.00 4.02
6208 6771 4.901849 ACACATATGCTACTACCTGGTCAT 59.098 41.667 0.63 2.66 0.00 3.06
6234 6797 0.675083 CACTGTCATGCCAAAGCCAA 59.325 50.000 0.00 0.00 38.69 4.52
6248 6811 3.234353 TCTGACCTCTTCATGTCACTGT 58.766 45.455 0.00 0.00 36.62 3.55
6308 6871 6.371809 TCACTAACTTACAACAAAAGCCAG 57.628 37.500 0.00 0.00 0.00 4.85
6311 6874 6.918022 AGCATTCACTAACTTACAACAAAAGC 59.082 34.615 0.00 0.00 0.00 3.51
6312 6875 8.856490 AAGCATTCACTAACTTACAACAAAAG 57.144 30.769 0.00 0.00 0.00 2.27
6314 6877 9.944663 CTAAAGCATTCACTAACTTACAACAAA 57.055 29.630 0.00 0.00 0.00 2.83
6315 6878 8.564574 CCTAAAGCATTCACTAACTTACAACAA 58.435 33.333 0.00 0.00 0.00 2.83
6316 6879 7.717875 ACCTAAAGCATTCACTAACTTACAACA 59.282 33.333 0.00 0.00 0.00 3.33
6317 6880 8.015658 CACCTAAAGCATTCACTAACTTACAAC 58.984 37.037 0.00 0.00 0.00 3.32
6318 6881 7.934665 TCACCTAAAGCATTCACTAACTTACAA 59.065 33.333 0.00 0.00 0.00 2.41
6319 6882 7.446769 TCACCTAAAGCATTCACTAACTTACA 58.553 34.615 0.00 0.00 0.00 2.41
6320 6883 7.900782 TCACCTAAAGCATTCACTAACTTAC 57.099 36.000 0.00 0.00 0.00 2.34
6321 6884 9.817809 CTATCACCTAAAGCATTCACTAACTTA 57.182 33.333 0.00 0.00 0.00 2.24
6322 6885 8.540388 TCTATCACCTAAAGCATTCACTAACTT 58.460 33.333 0.00 0.00 0.00 2.66
6323 6886 8.079211 TCTATCACCTAAAGCATTCACTAACT 57.921 34.615 0.00 0.00 0.00 2.24
6324 6887 8.894768 ATCTATCACCTAAAGCATTCACTAAC 57.105 34.615 0.00 0.00 0.00 2.34
6326 6889 9.982651 GTAATCTATCACCTAAAGCATTCACTA 57.017 33.333 0.00 0.00 0.00 2.74
6327 6890 8.709308 AGTAATCTATCACCTAAAGCATTCACT 58.291 33.333 0.00 0.00 0.00 3.41
6328 6891 8.894768 AGTAATCTATCACCTAAAGCATTCAC 57.105 34.615 0.00 0.00 0.00 3.18
6329 6892 8.928448 AGAGTAATCTATCACCTAAAGCATTCA 58.072 33.333 0.00 0.00 0.00 2.57
6330 6893 9.418045 GAGAGTAATCTATCACCTAAAGCATTC 57.582 37.037 0.00 0.00 32.77 2.67
6331 6894 8.928448 TGAGAGTAATCTATCACCTAAAGCATT 58.072 33.333 0.00 0.00 37.06 3.56
6332 6895 8.484214 TGAGAGTAATCTATCACCTAAAGCAT 57.516 34.615 0.00 0.00 37.06 3.79
6333 6896 7.898014 TGAGAGTAATCTATCACCTAAAGCA 57.102 36.000 0.00 0.00 37.06 3.91
6352 6915 0.446616 TCAACGACCGTCGATGAGAG 59.553 55.000 24.81 10.06 44.65 3.20
6388 6951 2.896685 CTGTCTCTCTCCAAGTGTCCTT 59.103 50.000 0.00 0.00 0.00 3.36
6394 6957 3.464720 TCCATCTGTCTCTCTCCAAGT 57.535 47.619 0.00 0.00 0.00 3.16
6396 6959 5.163205 TGTTTTTCCATCTGTCTCTCTCCAA 60.163 40.000 0.00 0.00 0.00 3.53
6405 6968 3.058914 CAGTCCGTGTTTTTCCATCTGTC 60.059 47.826 0.00 0.00 0.00 3.51
6407 6970 3.138304 TCAGTCCGTGTTTTTCCATCTG 58.862 45.455 0.00 0.00 0.00 2.90
6415 6978 3.738982 TGTCATCATCAGTCCGTGTTTT 58.261 40.909 0.00 0.00 0.00 2.43
6416 6979 3.401033 TGTCATCATCAGTCCGTGTTT 57.599 42.857 0.00 0.00 0.00 2.83
6417 6980 3.329386 CTTGTCATCATCAGTCCGTGTT 58.671 45.455 0.00 0.00 0.00 3.32
6419 6982 1.662629 GCTTGTCATCATCAGTCCGTG 59.337 52.381 0.00 0.00 0.00 4.94
6421 6984 2.014335 TGCTTGTCATCATCAGTCCG 57.986 50.000 0.00 0.00 0.00 4.79
6422 6985 3.603532 TCTTGCTTGTCATCATCAGTCC 58.396 45.455 0.00 0.00 0.00 3.85
6423 6986 5.618056 TTTCTTGCTTGTCATCATCAGTC 57.382 39.130 0.00 0.00 0.00 3.51
6432 6997 9.414295 CAAATCATCTTATTTTCTTGCTTGTCA 57.586 29.630 0.00 0.00 0.00 3.58
6442 7007 8.229811 GGCCAAACAACAAATCATCTTATTTTC 58.770 33.333 0.00 0.00 0.00 2.29
6443 7008 7.095271 CGGCCAAACAACAAATCATCTTATTTT 60.095 33.333 2.24 0.00 0.00 1.82
6444 7009 6.368516 CGGCCAAACAACAAATCATCTTATTT 59.631 34.615 2.24 0.00 0.00 1.40
6447 7012 4.804108 CGGCCAAACAACAAATCATCTTA 58.196 39.130 2.24 0.00 0.00 2.10
6448 7013 3.652274 CGGCCAAACAACAAATCATCTT 58.348 40.909 2.24 0.00 0.00 2.40
6449 7014 2.610232 GCGGCCAAACAACAAATCATCT 60.610 45.455 2.24 0.00 0.00 2.90
6450 7015 1.726248 GCGGCCAAACAACAAATCATC 59.274 47.619 2.24 0.00 0.00 2.92
6452 7017 0.461548 TGCGGCCAAACAACAAATCA 59.538 45.000 2.24 0.00 0.00 2.57
6453 7018 1.526464 CTTGCGGCCAAACAACAAATC 59.474 47.619 2.24 0.00 0.00 2.17
6455 7020 0.532573 TCTTGCGGCCAAACAACAAA 59.467 45.000 2.24 0.00 0.00 2.83
6456 7021 0.532573 TTCTTGCGGCCAAACAACAA 59.467 45.000 2.24 0.00 0.00 2.83
6459 7024 0.532573 TTGTTCTTGCGGCCAAACAA 59.467 45.000 15.94 15.94 32.26 2.83
6460 7025 0.102120 CTTGTTCTTGCGGCCAAACA 59.898 50.000 2.24 1.94 0.00 2.83
6461 7026 0.102300 ACTTGTTCTTGCGGCCAAAC 59.898 50.000 2.24 0.00 0.00 2.93
6469 7040 6.092748 TGAAAAGACTTTGACTTGTTCTTGC 58.907 36.000 0.06 0.00 0.00 4.01
6503 7074 2.773993 TTCAACCATAGGGAACGGTC 57.226 50.000 0.00 0.00 38.05 4.79
6506 7077 4.574828 CACCTAATTCAACCATAGGGAACG 59.425 45.833 0.00 0.00 40.44 3.95
6510 7081 6.663523 AGAAAACACCTAATTCAACCATAGGG 59.336 38.462 0.00 0.00 40.44 3.53
6517 7088 7.480810 ACACAAGAGAAAACACCTAATTCAAC 58.519 34.615 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.