Multiple sequence alignment - TraesCS7A01G031800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G031800 chr7A 100.000 3355 0 0 1 3355 13187145 13183791 0.000000e+00 6196.0
1 TraesCS7A01G031800 chr7A 98.907 183 2 0 2691 2873 133627898 133627716 8.980000e-86 327.0
2 TraesCS7A01G031800 chr7A 83.333 222 37 0 1889 2110 13099024 13099245 4.390000e-49 206.0
3 TraesCS7A01G031800 chr7D 90.774 1485 101 15 265 1729 13699208 13697740 0.000000e+00 1951.0
4 TraesCS7A01G031800 chr7D 88.848 825 70 13 1886 2693 13697245 13696426 0.000000e+00 994.0
5 TraesCS7A01G031800 chr7D 89.738 458 37 7 1951 2402 13694848 13694395 8.070000e-161 577.0
6 TraesCS7A01G031800 chr7D 83.191 351 59 0 1889 2239 13608585 13608935 4.180000e-84 322.0
7 TraesCS7A01G031800 chr7D 97.041 169 5 0 1722 1890 13697712 13697544 5.480000e-73 285.0
8 TraesCS7A01G031800 chr3D 85.495 455 62 4 1270 1723 585093296 585092845 3.920000e-129 472.0
9 TraesCS7A01G031800 chr3D 82.410 307 54 0 1889 2195 585092338 585092032 5.520000e-68 268.0
10 TraesCS7A01G031800 chr3D 86.982 169 22 0 1722 1890 585092809 585092641 1.230000e-44 191.0
11 TraesCS7A01G031800 chr3D 79.670 182 27 7 1054 1232 585093470 585093296 4.550000e-24 122.0
12 TraesCS7A01G031800 chr5B 98.396 187 3 0 2695 2881 674428225 674428411 2.500000e-86 329.0
13 TraesCS7A01G031800 chr5B 87.500 80 10 0 6 85 138558871 138558792 3.560000e-15 93.5
14 TraesCS7A01G031800 chr5B 83.871 93 11 3 4 95 689172830 689172741 5.960000e-13 86.1
15 TraesCS7A01G031800 chr5A 98.913 184 0 2 2694 2877 51800690 51800871 8.980000e-86 327.0
16 TraesCS7A01G031800 chr5A 99.419 172 1 0 2695 2866 514187088 514186917 2.510000e-81 313.0
17 TraesCS7A01G031800 chr5A 90.503 179 16 1 2700 2878 494977278 494977101 5.600000e-58 235.0
18 TraesCS7A01G031800 chr4B 98.315 178 3 0 2695 2872 430396367 430396544 2.510000e-81 313.0
19 TraesCS7A01G031800 chr1B 97.333 150 4 0 2730 2879 580621946 580622095 4.300000e-64 255.0
20 TraesCS7A01G031800 chr1B 98.734 79 1 0 2696 2774 580621930 580621852 1.250000e-29 141.0
21 TraesCS7A01G031800 chr1B 87.059 85 9 2 1 84 371449403 371449486 9.910000e-16 95.3
22 TraesCS7A01G031800 chr3A 80.108 186 33 3 2697 2880 667493931 667493748 5.840000e-28 135.0
23 TraesCS7A01G031800 chr3A 87.059 85 9 2 6 89 553881458 553881375 9.910000e-16 95.3
24 TraesCS7A01G031800 chr3A 86.047 86 10 2 1 85 69327078 69326994 1.280000e-14 91.6
25 TraesCS7A01G031800 chr3A 86.585 82 11 0 3 84 634234013 634234094 1.280000e-14 91.6
26 TraesCS7A01G031800 chr2B 91.139 79 7 0 6 84 214830324 214830402 1.270000e-19 108.0
27 TraesCS7A01G031800 chr3B 86.517 89 10 2 1 88 222320879 222320792 2.760000e-16 97.1
28 TraesCS7A01G031800 chr7B 85.417 96 9 4 5 98 496220242 496220150 9.910000e-16 95.3
29 TraesCS7A01G031800 chr1A 96.552 58 1 1 2825 2882 468609980 468610036 9.910000e-16 95.3
30 TraesCS7A01G031800 chr2A 75.484 155 31 3 682 836 587270678 587270531 6.010000e-08 69.4
31 TraesCS7A01G031800 chr2A 82.353 68 7 5 2763 2828 211485019 211484955 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G031800 chr7A 13183791 13187145 3354 True 6196.00 6196 100.00000 1 3355 1 chr7A.!!$R1 3354
1 TraesCS7A01G031800 chr7D 13694395 13699208 4813 True 951.75 1951 91.60025 265 2693 4 chr7D.!!$R1 2428
2 TraesCS7A01G031800 chr3D 585092032 585093470 1438 True 263.25 472 83.63925 1054 2195 4 chr3D.!!$R1 1141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
218 219 0.036732 TCTGCCAAGCGTCTCCATTT 59.963 50.0 0.0 0.0 0.0 2.32 F
771 786 0.106708 TCACTGAGCTTGACACCACC 59.893 55.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1293 1315 0.179062 CAATGAGAGGGAAGGAGCCG 60.179 60.0 0.00 0.0 0.00 5.52 R
2616 2995 0.030908 GAGGGTCGAAGCTACATCGG 59.969 60.0 6.46 0.0 40.59 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.950680 ATTGGATGTATCTAAAACTAAAATGCG 57.049 29.630 0.00 0.00 30.96 4.73
36 37 8.500753 TGGATGTATCTAAAACTAAAATGCGT 57.499 30.769 0.00 0.00 0.00 5.24
37 38 8.609176 TGGATGTATCTAAAACTAAAATGCGTC 58.391 33.333 0.00 0.00 0.00 5.19
38 39 8.827677 GGATGTATCTAAAACTAAAATGCGTCT 58.172 33.333 0.00 0.00 0.00 4.18
58 59 9.541143 TGCGTCTAGATACATTTATTTTCATGA 57.459 29.630 0.00 0.00 0.00 3.07
75 76 7.938563 TTTCATGAAAAGTATTTCCAAACGG 57.061 32.000 18.45 0.00 43.54 4.44
76 77 6.885952 TCATGAAAAGTATTTCCAAACGGA 57.114 33.333 0.00 0.00 43.54 4.69
77 78 6.908825 TCATGAAAAGTATTTCCAAACGGAG 58.091 36.000 0.00 0.00 43.54 4.63
78 79 5.699097 TGAAAAGTATTTCCAAACGGAGG 57.301 39.130 0.00 0.00 43.54 4.30
79 80 4.521256 TGAAAAGTATTTCCAAACGGAGGG 59.479 41.667 0.00 0.00 43.54 4.30
80 81 4.376225 AAAGTATTTCCAAACGGAGGGA 57.624 40.909 0.00 0.00 27.08 4.20
81 82 3.629142 AGTATTTCCAAACGGAGGGAG 57.371 47.619 0.00 0.00 34.02 4.30
82 83 2.910977 AGTATTTCCAAACGGAGGGAGT 59.089 45.455 0.00 0.00 34.02 3.85
83 84 4.098894 AGTATTTCCAAACGGAGGGAGTA 58.901 43.478 0.00 0.00 34.02 2.59
84 85 4.720273 AGTATTTCCAAACGGAGGGAGTAT 59.280 41.667 0.00 0.00 34.02 2.12
85 86 3.343941 TTTCCAAACGGAGGGAGTATG 57.656 47.619 0.00 0.00 34.02 2.39
86 87 1.946984 TCCAAACGGAGGGAGTATGT 58.053 50.000 0.00 0.00 0.00 2.29
87 88 3.104519 TCCAAACGGAGGGAGTATGTA 57.895 47.619 0.00 0.00 0.00 2.29
88 89 3.649843 TCCAAACGGAGGGAGTATGTAT 58.350 45.455 0.00 0.00 0.00 2.29
89 90 3.386726 TCCAAACGGAGGGAGTATGTATG 59.613 47.826 0.00 0.00 0.00 2.39
90 91 3.131396 CAAACGGAGGGAGTATGTATGC 58.869 50.000 0.00 0.00 0.00 3.14
91 92 1.339097 ACGGAGGGAGTATGTATGCC 58.661 55.000 0.00 0.00 0.00 4.40
92 93 1.338107 CGGAGGGAGTATGTATGCCA 58.662 55.000 0.00 0.00 0.00 4.92
93 94 1.691976 CGGAGGGAGTATGTATGCCAA 59.308 52.381 0.00 0.00 0.00 4.52
94 95 2.303022 CGGAGGGAGTATGTATGCCAAT 59.697 50.000 0.00 0.00 0.00 3.16
95 96 3.244561 CGGAGGGAGTATGTATGCCAATT 60.245 47.826 0.00 0.00 0.00 2.32
96 97 4.729868 GGAGGGAGTATGTATGCCAATTT 58.270 43.478 0.00 0.00 0.00 1.82
97 98 4.520492 GGAGGGAGTATGTATGCCAATTTG 59.480 45.833 0.00 0.00 0.00 2.32
98 99 5.129368 AGGGAGTATGTATGCCAATTTGT 57.871 39.130 0.00 0.00 0.00 2.83
99 100 5.518865 AGGGAGTATGTATGCCAATTTGTT 58.481 37.500 0.00 0.00 0.00 2.83
100 101 5.957774 AGGGAGTATGTATGCCAATTTGTTT 59.042 36.000 0.00 0.00 0.00 2.83
101 102 6.440328 AGGGAGTATGTATGCCAATTTGTTTT 59.560 34.615 0.00 0.00 0.00 2.43
102 103 6.756542 GGGAGTATGTATGCCAATTTGTTTTC 59.243 38.462 0.00 0.00 0.00 2.29
103 104 7.363793 GGGAGTATGTATGCCAATTTGTTTTCT 60.364 37.037 0.00 0.00 0.00 2.52
104 105 7.489113 GGAGTATGTATGCCAATTTGTTTTCTG 59.511 37.037 0.00 0.00 0.00 3.02
105 106 6.813152 AGTATGTATGCCAATTTGTTTTCTGC 59.187 34.615 0.00 0.00 0.00 4.26
106 107 4.953667 TGTATGCCAATTTGTTTTCTGCA 58.046 34.783 0.00 0.00 0.00 4.41
107 108 5.549347 TGTATGCCAATTTGTTTTCTGCAT 58.451 33.333 11.51 11.51 40.67 3.96
108 109 6.695429 TGTATGCCAATTTGTTTTCTGCATA 58.305 32.000 10.03 10.03 38.72 3.14
109 110 7.329499 TGTATGCCAATTTGTTTTCTGCATAT 58.671 30.769 14.58 0.00 40.87 1.78
110 111 8.473219 TGTATGCCAATTTGTTTTCTGCATATA 58.527 29.630 14.58 11.16 40.87 0.86
111 112 9.311916 GTATGCCAATTTGTTTTCTGCATATAA 57.688 29.630 14.58 0.00 40.87 0.98
112 113 7.593875 TGCCAATTTGTTTTCTGCATATAAC 57.406 32.000 0.00 0.00 0.00 1.89
113 114 6.593382 TGCCAATTTGTTTTCTGCATATAACC 59.407 34.615 3.59 0.00 0.00 2.85
114 115 6.037062 GCCAATTTGTTTTCTGCATATAACCC 59.963 38.462 3.59 0.00 0.00 4.11
115 116 7.330262 CCAATTTGTTTTCTGCATATAACCCT 58.670 34.615 3.59 0.00 0.00 4.34
116 117 7.278424 CCAATTTGTTTTCTGCATATAACCCTG 59.722 37.037 3.59 0.00 0.00 4.45
117 118 5.913137 TTGTTTTCTGCATATAACCCTGG 57.087 39.130 3.59 0.00 0.00 4.45
118 119 4.929479 TGTTTTCTGCATATAACCCTGGT 58.071 39.130 3.59 0.00 0.00 4.00
119 120 4.947388 TGTTTTCTGCATATAACCCTGGTC 59.053 41.667 3.59 0.00 0.00 4.02
120 121 3.857157 TTCTGCATATAACCCTGGTCC 57.143 47.619 0.00 0.00 0.00 4.46
121 122 2.770447 TCTGCATATAACCCTGGTCCA 58.230 47.619 0.00 0.00 0.00 4.02
122 123 3.326521 TCTGCATATAACCCTGGTCCAT 58.673 45.455 0.00 0.00 0.00 3.41
123 124 3.721575 TCTGCATATAACCCTGGTCCATT 59.278 43.478 0.00 0.00 0.00 3.16
124 125 3.822735 CTGCATATAACCCTGGTCCATTG 59.177 47.826 0.00 0.00 0.00 2.82
125 126 3.157087 GCATATAACCCTGGTCCATTGG 58.843 50.000 6.11 6.11 0.00 3.16
126 127 3.436470 GCATATAACCCTGGTCCATTGGT 60.436 47.826 7.29 7.29 0.00 3.67
127 128 4.202524 GCATATAACCCTGGTCCATTGGTA 60.203 45.833 12.43 1.47 0.00 3.25
128 129 3.945640 ATAACCCTGGTCCATTGGTAC 57.054 47.619 12.43 0.00 0.00 3.34
129 130 0.702316 AACCCTGGTCCATTGGTACC 59.298 55.000 12.43 4.43 36.24 3.34
130 131 0.178843 ACCCTGGTCCATTGGTACCT 60.179 55.000 14.36 0.00 36.67 3.08
131 132 0.255890 CCCTGGTCCATTGGTACCTG 59.744 60.000 14.36 17.93 36.67 4.00
132 133 0.394352 CCTGGTCCATTGGTACCTGC 60.394 60.000 14.36 0.00 36.67 4.85
133 134 0.620556 CTGGTCCATTGGTACCTGCT 59.379 55.000 14.36 0.00 36.67 4.24
134 135 0.327924 TGGTCCATTGGTACCTGCTG 59.672 55.000 14.36 7.63 36.67 4.41
135 136 0.394352 GGTCCATTGGTACCTGCTGG 60.394 60.000 14.36 16.08 39.83 4.85
137 138 1.072266 TCCATTGGTACCTGCTGGTT 58.928 50.000 21.33 5.33 46.05 3.67
138 139 1.427368 TCCATTGGTACCTGCTGGTTT 59.573 47.619 21.33 0.00 46.05 3.27
139 140 2.158385 TCCATTGGTACCTGCTGGTTTT 60.158 45.455 21.33 0.00 46.05 2.43
140 141 3.074687 TCCATTGGTACCTGCTGGTTTTA 59.925 43.478 21.33 0.00 46.05 1.52
141 142 3.443681 CCATTGGTACCTGCTGGTTTTAG 59.556 47.826 21.33 6.62 46.05 1.85
142 143 2.194201 TGGTACCTGCTGGTTTTAGC 57.806 50.000 21.33 12.85 46.05 3.09
143 144 1.702957 TGGTACCTGCTGGTTTTAGCT 59.297 47.619 21.33 0.00 46.05 3.32
144 145 2.907696 TGGTACCTGCTGGTTTTAGCTA 59.092 45.455 21.33 0.00 46.05 3.32
145 146 3.521937 TGGTACCTGCTGGTTTTAGCTAT 59.478 43.478 21.33 0.00 46.05 2.97
146 147 3.877508 GGTACCTGCTGGTTTTAGCTATG 59.122 47.826 21.33 0.00 46.05 2.23
147 148 3.004752 ACCTGCTGGTTTTAGCTATGG 57.995 47.619 9.88 0.00 46.05 2.74
148 149 1.678101 CCTGCTGGTTTTAGCTATGGC 59.322 52.381 0.51 0.00 44.01 4.40
149 150 2.368439 CTGCTGGTTTTAGCTATGGCA 58.632 47.619 3.10 0.00 44.01 4.92
150 151 2.357009 CTGCTGGTTTTAGCTATGGCAG 59.643 50.000 3.10 5.19 44.01 4.85
151 152 2.026356 TGCTGGTTTTAGCTATGGCAGA 60.026 45.455 3.10 0.00 44.01 4.26
152 153 2.615912 GCTGGTTTTAGCTATGGCAGAG 59.384 50.000 4.40 4.40 40.52 3.35
153 154 2.615912 CTGGTTTTAGCTATGGCAGAGC 59.384 50.000 25.78 25.78 41.70 4.09
158 159 4.775295 GCTATGGCAGAGCTCCTG 57.225 61.111 25.82 9.35 45.67 3.86
173 174 4.873768 GCTCCTGCTATTTCTTCAGAAC 57.126 45.455 0.00 0.00 33.09 3.01
174 175 3.308323 GCTCCTGCTATTTCTTCAGAACG 59.692 47.826 0.00 0.00 33.09 3.95
175 176 4.499183 CTCCTGCTATTTCTTCAGAACGT 58.501 43.478 0.00 0.00 33.13 3.99
176 177 4.894784 TCCTGCTATTTCTTCAGAACGTT 58.105 39.130 0.00 0.00 33.13 3.99
177 178 4.690748 TCCTGCTATTTCTTCAGAACGTTG 59.309 41.667 5.00 0.00 33.13 4.10
178 179 4.690748 CCTGCTATTTCTTCAGAACGTTGA 59.309 41.667 5.00 0.00 33.13 3.18
179 180 5.352569 CCTGCTATTTCTTCAGAACGTTGAT 59.647 40.000 5.00 0.00 33.13 2.57
180 181 6.535150 CCTGCTATTTCTTCAGAACGTTGATA 59.465 38.462 5.00 0.00 33.13 2.15
181 182 7.064609 CCTGCTATTTCTTCAGAACGTTGATAA 59.935 37.037 5.00 0.00 33.13 1.75
182 183 8.317891 TGCTATTTCTTCAGAACGTTGATAAA 57.682 30.769 5.00 3.34 33.13 1.40
183 184 8.946085 TGCTATTTCTTCAGAACGTTGATAAAT 58.054 29.630 5.00 10.19 33.13 1.40
189 190 9.443323 TTCTTCAGAACGTTGATAAATAATCCA 57.557 29.630 5.00 0.00 33.22 3.41
190 191 8.879759 TCTTCAGAACGTTGATAAATAATCCAC 58.120 33.333 5.00 0.00 33.22 4.02
191 192 8.786826 TTCAGAACGTTGATAAATAATCCACT 57.213 30.769 5.00 0.00 33.22 4.00
192 193 8.786826 TCAGAACGTTGATAAATAATCCACTT 57.213 30.769 5.00 0.00 33.22 3.16
193 194 8.664798 TCAGAACGTTGATAAATAATCCACTTG 58.335 33.333 5.00 0.00 33.22 3.16
194 195 8.450964 CAGAACGTTGATAAATAATCCACTTGT 58.549 33.333 5.00 0.00 33.22 3.16
195 196 8.450964 AGAACGTTGATAAATAATCCACTTGTG 58.549 33.333 5.00 0.00 33.22 3.33
196 197 7.681939 ACGTTGATAAATAATCCACTTGTGT 57.318 32.000 0.00 0.00 33.22 3.72
197 198 7.748847 ACGTTGATAAATAATCCACTTGTGTC 58.251 34.615 0.00 0.00 33.22 3.67
198 199 7.389330 ACGTTGATAAATAATCCACTTGTGTCA 59.611 33.333 0.00 0.00 33.22 3.58
199 200 8.397906 CGTTGATAAATAATCCACTTGTGTCAT 58.602 33.333 0.00 0.00 33.22 3.06
200 201 9.722056 GTTGATAAATAATCCACTTGTGTCATC 57.278 33.333 0.00 0.00 33.22 2.92
201 202 9.685276 TTGATAAATAATCCACTTGTGTCATCT 57.315 29.630 0.00 0.00 33.22 2.90
202 203 9.112725 TGATAAATAATCCACTTGTGTCATCTG 57.887 33.333 0.00 0.00 33.22 2.90
203 204 5.824904 AATAATCCACTTGTGTCATCTGC 57.175 39.130 0.00 0.00 0.00 4.26
204 205 2.119801 ATCCACTTGTGTCATCTGCC 57.880 50.000 0.00 0.00 0.00 4.85
205 206 0.764271 TCCACTTGTGTCATCTGCCA 59.236 50.000 0.00 0.00 0.00 4.92
206 207 1.142667 TCCACTTGTGTCATCTGCCAA 59.857 47.619 0.00 0.00 0.00 4.52
207 208 1.538512 CCACTTGTGTCATCTGCCAAG 59.461 52.381 0.00 0.00 40.05 3.61
208 209 1.068748 CACTTGTGTCATCTGCCAAGC 60.069 52.381 0.00 0.00 38.24 4.01
209 210 0.167470 CTTGTGTCATCTGCCAAGCG 59.833 55.000 0.00 0.00 0.00 4.68
210 211 0.534877 TTGTGTCATCTGCCAAGCGT 60.535 50.000 0.00 0.00 0.00 5.07
211 212 0.950555 TGTGTCATCTGCCAAGCGTC 60.951 55.000 0.00 0.00 0.00 5.19
212 213 0.671781 GTGTCATCTGCCAAGCGTCT 60.672 55.000 0.00 0.00 0.00 4.18
213 214 0.390340 TGTCATCTGCCAAGCGTCTC 60.390 55.000 0.00 0.00 0.00 3.36
214 215 1.086634 GTCATCTGCCAAGCGTCTCC 61.087 60.000 0.00 0.00 0.00 3.71
215 216 1.078918 CATCTGCCAAGCGTCTCCA 60.079 57.895 0.00 0.00 0.00 3.86
216 217 0.463295 CATCTGCCAAGCGTCTCCAT 60.463 55.000 0.00 0.00 0.00 3.41
217 218 0.254178 ATCTGCCAAGCGTCTCCATT 59.746 50.000 0.00 0.00 0.00 3.16
218 219 0.036732 TCTGCCAAGCGTCTCCATTT 59.963 50.000 0.00 0.00 0.00 2.32
219 220 1.277842 TCTGCCAAGCGTCTCCATTTA 59.722 47.619 0.00 0.00 0.00 1.40
220 221 1.398390 CTGCCAAGCGTCTCCATTTAC 59.602 52.381 0.00 0.00 0.00 2.01
221 222 1.003118 TGCCAAGCGTCTCCATTTACT 59.997 47.619 0.00 0.00 0.00 2.24
222 223 1.666189 GCCAAGCGTCTCCATTTACTC 59.334 52.381 0.00 0.00 0.00 2.59
223 224 2.678190 GCCAAGCGTCTCCATTTACTCT 60.678 50.000 0.00 0.00 0.00 3.24
224 225 3.430374 GCCAAGCGTCTCCATTTACTCTA 60.430 47.826 0.00 0.00 0.00 2.43
225 226 4.740934 GCCAAGCGTCTCCATTTACTCTAT 60.741 45.833 0.00 0.00 0.00 1.98
226 227 5.360591 CCAAGCGTCTCCATTTACTCTATT 58.639 41.667 0.00 0.00 0.00 1.73
227 228 5.817816 CCAAGCGTCTCCATTTACTCTATTT 59.182 40.000 0.00 0.00 0.00 1.40
228 229 6.316390 CCAAGCGTCTCCATTTACTCTATTTT 59.684 38.462 0.00 0.00 0.00 1.82
229 230 7.402640 CAAGCGTCTCCATTTACTCTATTTTC 58.597 38.462 0.00 0.00 0.00 2.29
230 231 6.879400 AGCGTCTCCATTTACTCTATTTTCT 58.121 36.000 0.00 0.00 0.00 2.52
231 232 7.331791 AGCGTCTCCATTTACTCTATTTTCTT 58.668 34.615 0.00 0.00 0.00 2.52
232 233 7.492994 AGCGTCTCCATTTACTCTATTTTCTTC 59.507 37.037 0.00 0.00 0.00 2.87
233 234 7.492994 GCGTCTCCATTTACTCTATTTTCTTCT 59.507 37.037 0.00 0.00 0.00 2.85
234 235 9.026074 CGTCTCCATTTACTCTATTTTCTTCTC 57.974 37.037 0.00 0.00 0.00 2.87
235 236 9.877178 GTCTCCATTTACTCTATTTTCTTCTCA 57.123 33.333 0.00 0.00 0.00 3.27
287 288 7.125963 AGGGTATAACAGAGTAAAAGCTAGCTT 59.874 37.037 24.42 24.42 37.98 3.74
293 294 3.330998 AGAGTAAAAGCTAGCTTGGGGTT 59.669 43.478 29.94 21.40 36.26 4.11
301 303 3.154710 GCTAGCTTGGGGTTTTACTGTT 58.845 45.455 7.70 0.00 0.00 3.16
304 306 3.154710 AGCTTGGGGTTTTACTGTTAGC 58.845 45.455 0.00 0.00 0.00 3.09
309 311 5.571791 TGGGGTTTTACTGTTAGCTTAGT 57.428 39.130 0.00 0.00 0.00 2.24
325 327 9.543018 GTTAGCTTAGTTATTGCTTTTACTGTG 57.457 33.333 0.00 0.00 38.15 3.66
328 330 8.718734 AGCTTAGTTATTGCTTTTACTGTGTAC 58.281 33.333 0.00 0.00 32.61 2.90
331 333 6.899114 AGTTATTGCTTTTACTGTGTACTGC 58.101 36.000 0.00 0.00 0.00 4.40
332 334 6.710744 AGTTATTGCTTTTACTGTGTACTGCT 59.289 34.615 0.00 0.00 0.00 4.24
333 335 7.228706 AGTTATTGCTTTTACTGTGTACTGCTT 59.771 33.333 0.00 0.00 0.00 3.91
334 336 4.811555 TGCTTTTACTGTGTACTGCTTG 57.188 40.909 0.00 0.00 0.00 4.01
335 337 3.003275 TGCTTTTACTGTGTACTGCTTGC 59.997 43.478 0.00 0.00 0.00 4.01
336 338 3.799035 CTTTTACTGTGTACTGCTTGCG 58.201 45.455 0.00 0.00 0.00 4.85
337 339 1.790755 TTACTGTGTACTGCTTGCGG 58.209 50.000 0.00 0.00 0.00 5.69
338 340 0.963225 TACTGTGTACTGCTTGCGGA 59.037 50.000 8.57 0.00 0.00 5.54
339 341 0.321671 ACTGTGTACTGCTTGCGGAT 59.678 50.000 8.57 0.00 0.00 4.18
345 356 2.419673 TGTACTGCTTGCGGATTGATTG 59.580 45.455 8.57 0.00 0.00 2.67
358 369 4.475944 GGATTGATTGTGCACACTTGTAC 58.524 43.478 21.56 10.09 38.74 2.90
366 377 3.181515 TGTGCACACTTGTACTTTTGTCG 60.182 43.478 17.42 0.00 39.02 4.35
379 390 2.419057 TTTGTCGCATGCTGGTTGCC 62.419 55.000 17.13 0.00 42.00 4.52
381 392 2.361483 TCGCATGCTGGTTGCCAT 60.361 55.556 17.13 0.00 42.00 4.40
405 416 4.336101 CGTCACTCGTTAAGATCTGACTC 58.664 47.826 0.00 0.00 35.70 3.36
431 445 2.094258 AGTTGATGCATGTCGTTTAGCG 59.906 45.455 2.46 0.00 43.01 4.26
449 463 2.621998 AGCGCCTAATGTACGTACTCAT 59.378 45.455 25.12 13.91 0.00 2.90
467 481 7.539022 CGTACTCATGTAACTAATCCTGCATAG 59.461 40.741 0.00 0.00 0.00 2.23
506 520 1.075542 CATGTACGCGTCATGTTGGT 58.924 50.000 28.27 8.26 38.17 3.67
524 538 7.643569 TGTTGGTCACGTTATATTAGGTAGA 57.356 36.000 0.00 0.00 0.00 2.59
527 541 7.268199 TGGTCACGTTATATTAGGTAGACTG 57.732 40.000 12.41 0.00 0.00 3.51
552 566 6.251376 GCAAGCGTCAAAACAATAGGAAATAG 59.749 38.462 0.00 0.00 0.00 1.73
563 577 8.574309 AACAATAGGAAATAGGAAGAGGAGAT 57.426 34.615 0.00 0.00 0.00 2.75
574 588 6.432403 AGGAAGAGGAGATGATTGATTACC 57.568 41.667 0.00 0.00 0.00 2.85
575 589 5.011533 AGGAAGAGGAGATGATTGATTACCG 59.988 44.000 0.00 0.00 0.00 4.02
598 612 3.247411 GCCACATGCCAACTTGTTTTTAC 59.753 43.478 0.00 0.00 32.19 2.01
600 614 5.055812 CCACATGCCAACTTGTTTTTACAT 58.944 37.500 0.00 0.00 32.19 2.29
654 669 3.128852 TGGTACAAGCCACGTAAACAT 57.871 42.857 0.00 0.00 31.92 2.71
658 673 1.796459 ACAAGCCACGTAAACATCGAC 59.204 47.619 0.00 0.00 0.00 4.20
660 675 0.390735 AGCCACGTAAACATCGACCC 60.391 55.000 0.00 0.00 0.00 4.46
668 683 1.253100 AAACATCGACCCGCCAAAAT 58.747 45.000 0.00 0.00 0.00 1.82
669 684 2.116827 AACATCGACCCGCCAAAATA 57.883 45.000 0.00 0.00 0.00 1.40
714 729 4.981806 TTTGCACAAAGAAACACTAGCT 57.018 36.364 0.00 0.00 0.00 3.32
721 736 6.202954 GCACAAAGAAACACTAGCTAAGAAGA 59.797 38.462 0.00 0.00 0.00 2.87
723 738 8.778358 CACAAAGAAACACTAGCTAAGAAGAAT 58.222 33.333 0.00 0.00 0.00 2.40
771 786 0.106708 TCACTGAGCTTGACACCACC 59.893 55.000 0.00 0.00 0.00 4.61
772 787 0.179048 CACTGAGCTTGACACCACCA 60.179 55.000 0.00 0.00 0.00 4.17
773 788 0.179045 ACTGAGCTTGACACCACCAC 60.179 55.000 0.00 0.00 0.00 4.16
775 790 1.344953 TGAGCTTGACACCACCACCT 61.345 55.000 0.00 0.00 0.00 4.00
778 793 1.447317 GCTTGACACCACCACCTGTG 61.447 60.000 0.00 0.00 45.01 3.66
787 802 2.078665 ACCACCTGTGACCTGCCTT 61.079 57.895 0.00 0.00 0.00 4.35
809 824 0.666374 GCACCACTACAACAACCACC 59.334 55.000 0.00 0.00 0.00 4.61
841 856 0.325671 ATGACGGGTCACCTCCTCAT 60.326 55.000 3.22 0.00 43.11 2.90
843 858 1.677637 GACGGGTCACCTCCTCATCC 61.678 65.000 0.00 0.00 33.28 3.51
853 868 1.208052 CCTCCTCATCCAAGCTCGAAA 59.792 52.381 0.00 0.00 0.00 3.46
861 876 6.483307 CCTCATCCAAGCTCGAAAATATACAA 59.517 38.462 0.00 0.00 0.00 2.41
866 881 3.131396 AGCTCGAAAATATACAAGCCCG 58.869 45.455 0.00 0.00 0.00 6.13
883 898 5.836024 AGCCCGTGGGAGAAAAATATATA 57.164 39.130 9.72 0.00 37.50 0.86
935 950 5.721232 ACATAAGAACTTAGACGGACTTGG 58.279 41.667 0.00 0.00 0.00 3.61
939 954 2.745515 ACTTAGACGGACTTGGCTTC 57.254 50.000 0.00 0.00 0.00 3.86
950 965 4.876107 CGGACTTGGCTTCATAGTTGTTAT 59.124 41.667 0.00 0.00 0.00 1.89
977 992 3.149196 ACCTGACTTAAGTTACGTCCGA 58.851 45.455 10.02 0.00 0.00 4.55
982 997 4.516698 TGACTTAAGTTACGTCCGAAGAGT 59.483 41.667 10.02 0.00 0.00 3.24
1028 1043 0.940126 CACGGGCTCATCTGCATAAC 59.060 55.000 0.00 0.00 34.04 1.89
1063 1078 2.700897 TCCAAATCAGTCTAGCTAGCCC 59.299 50.000 16.35 8.84 0.00 5.19
1109 1128 0.846693 ACCATCCTCCCTACAATGGC 59.153 55.000 0.25 0.00 41.99 4.40
1155 1174 0.951558 TTCTCAAAGCCACTTTCCGC 59.048 50.000 0.00 0.00 30.60 5.54
1293 1315 0.302890 CGCTCATGCACCTTCGATTC 59.697 55.000 0.00 0.00 39.64 2.52
1317 1339 1.004745 TCCTTCCCTCTCATTGTTGCC 59.995 52.381 0.00 0.00 0.00 4.52
1318 1340 1.005215 CCTTCCCTCTCATTGTTGCCT 59.995 52.381 0.00 0.00 0.00 4.75
1386 1408 1.372087 CTACGTCGACCGCCCTAAGT 61.372 60.000 10.58 1.72 41.42 2.24
1387 1409 0.960364 TACGTCGACCGCCCTAAGTT 60.960 55.000 10.58 0.00 41.42 2.66
1388 1410 1.080298 CGTCGACCGCCCTAAGTTT 60.080 57.895 10.58 0.00 0.00 2.66
1455 1477 3.145551 CCTACGGCGCCTACTGGT 61.146 66.667 26.68 17.04 35.27 4.00
1523 1545 2.879907 GCACTCATGGCGCACATT 59.120 55.556 10.83 0.00 37.84 2.71
1595 1617 1.081906 CAAGCGCGTTGTGCATCTT 60.082 52.632 8.43 0.00 46.97 2.40
1616 1638 1.860641 ATAGGGACCACATGTCGACA 58.139 50.000 22.48 22.48 45.46 4.35
1743 1802 2.203451 CTGGATCCCATGGCTGGC 60.203 66.667 9.90 0.00 41.64 4.85
1754 1813 3.415087 GGCTGGCCTGGATGGACT 61.415 66.667 12.06 0.00 46.68 3.85
1923 2286 2.581409 GTCGGCGGGTATGACGTG 60.581 66.667 7.21 0.00 42.32 4.49
1957 2320 0.943835 CGTGCTCATCAACGTGTGGA 60.944 55.000 0.00 0.00 0.00 4.02
1962 2325 2.002586 CTCATCAACGTGTGGACCATC 58.997 52.381 0.00 0.00 0.00 3.51
1967 2330 4.386951 CGTGTGGACCATCGGCCA 62.387 66.667 2.24 0.00 0.00 5.36
2046 2409 0.320374 AGATCGACGTGAAAGGGCAA 59.680 50.000 0.00 0.00 0.00 4.52
2073 2436 1.208293 GAGCTTCTTCCATTCGGGTCT 59.792 52.381 0.00 0.00 38.11 3.85
2118 2481 2.294078 CCTCGGGCTGAAGGAGGTT 61.294 63.158 0.00 0.00 41.93 3.50
2166 2529 1.451936 GTTCACCTGGACACTGCCT 59.548 57.895 0.00 0.00 0.00 4.75
2168 2531 1.344953 TTCACCTGGACACTGCCTGT 61.345 55.000 0.00 0.00 34.96 4.00
2176 2539 2.753043 CACTGCCTGTGGGGATGC 60.753 66.667 0.00 0.00 42.68 3.91
2177 2540 4.052518 ACTGCCTGTGGGGATGCC 62.053 66.667 0.00 0.00 37.23 4.40
2178 2541 4.828296 CTGCCTGTGGGGATGCCC 62.828 72.222 16.99 16.99 44.51 5.36
2205 2568 0.913451 AGCTGAGCATGGAGGAGGTT 60.913 55.000 7.39 0.00 0.00 3.50
2239 2602 4.752879 GCCGCAAGTACCCGCTGA 62.753 66.667 2.95 0.00 0.00 4.26
2262 2625 4.143333 GTCGCCGCTCCCAAGCTA 62.143 66.667 0.00 0.00 46.91 3.32
2307 2670 5.237127 AGTTTGATATACGTCATGCATGTGG 59.763 40.000 25.43 19.61 0.00 4.17
2316 2679 3.016031 GTCATGCATGTGGTATGGTTCA 58.984 45.455 25.43 0.00 39.75 3.18
2319 2682 2.287769 TGCATGTGGTATGGTTCATCG 58.712 47.619 0.00 0.00 0.00 3.84
2345 2708 4.434545 ACTAGTCTATTCCGCCAGTCTA 57.565 45.455 0.00 0.00 0.00 2.59
2346 2709 4.136051 ACTAGTCTATTCCGCCAGTCTAC 58.864 47.826 0.00 0.00 0.00 2.59
2348 2711 2.029623 GTCTATTCCGCCAGTCTACCA 58.970 52.381 0.00 0.00 0.00 3.25
2351 2714 1.972660 ATTCCGCCAGTCTACCAGCC 61.973 60.000 0.00 0.00 0.00 4.85
2389 2753 4.150897 AGTTGGTTGCTCAAGACAAGTA 57.849 40.909 5.86 0.00 0.00 2.24
2391 2755 4.516698 AGTTGGTTGCTCAAGACAAGTATG 59.483 41.667 5.86 0.00 0.00 2.39
2398 2762 4.106197 GCTCAAGACAAGTATGTAGACCG 58.894 47.826 0.00 0.00 40.74 4.79
2413 2777 3.446442 AGACCGAACCTAGTTACCTCA 57.554 47.619 0.00 0.00 0.00 3.86
2420 2784 5.178809 CCGAACCTAGTTACCTCAAAGTTTG 59.821 44.000 9.44 9.44 0.00 2.93
2435 2799 5.006941 TCAAAGTTTGTACTAAACCAGCGAC 59.993 40.000 15.08 0.00 33.17 5.19
2451 2815 4.929211 CCAGCGACAAATAATATGGATCGA 59.071 41.667 0.00 0.00 0.00 3.59
2452 2816 5.408299 CCAGCGACAAATAATATGGATCGAA 59.592 40.000 0.00 0.00 0.00 3.71
2453 2817 6.401474 CCAGCGACAAATAATATGGATCGAAG 60.401 42.308 0.00 0.00 0.00 3.79
2454 2818 5.120830 AGCGACAAATAATATGGATCGAAGC 59.879 40.000 0.00 0.00 0.00 3.86
2455 2819 5.107104 GCGACAAATAATATGGATCGAAGCA 60.107 40.000 0.00 0.00 0.00 3.91
2519 2883 4.877773 AGTCAATAATTGGCATAACCCCA 58.122 39.130 0.00 0.00 37.85 4.96
2522 2886 4.592351 TCAATAATTGGCATAACCCCATGG 59.408 41.667 4.14 4.14 37.83 3.66
2544 2908 2.099098 CCGGGTCAAGATGCATTTTACC 59.901 50.000 0.00 9.81 0.00 2.85
2545 2909 3.016736 CGGGTCAAGATGCATTTTACCT 58.983 45.455 18.93 4.45 0.00 3.08
2546 2910 3.443681 CGGGTCAAGATGCATTTTACCTT 59.556 43.478 18.93 9.15 0.00 3.50
2547 2911 4.438744 CGGGTCAAGATGCATTTTACCTTC 60.439 45.833 18.93 9.48 0.00 3.46
2549 2913 5.127682 GGGTCAAGATGCATTTTACCTTCAT 59.872 40.000 18.93 0.00 0.00 2.57
2550 2914 6.038356 GGTCAAGATGCATTTTACCTTCATG 58.962 40.000 0.00 0.00 0.00 3.07
2551 2915 6.038356 GTCAAGATGCATTTTACCTTCATGG 58.962 40.000 0.00 0.00 42.93 3.66
2561 2925 3.532896 CCTTCATGGTGCACTACGT 57.467 52.632 17.98 0.00 0.00 3.57
2562 2926 1.808411 CCTTCATGGTGCACTACGTT 58.192 50.000 17.98 0.00 0.00 3.99
2563 2927 2.151202 CCTTCATGGTGCACTACGTTT 58.849 47.619 17.98 0.00 0.00 3.60
2574 2946 3.949113 TGCACTACGTTTTCCCTTTTTCT 59.051 39.130 0.00 0.00 0.00 2.52
2586 2958 7.936496 TTTCCCTTTTTCTTTTTGAAATGCT 57.064 28.000 0.00 0.00 43.34 3.79
2608 2987 0.033366 TTGCACTGCTCAGCGTCTTA 59.967 50.000 1.98 0.00 0.00 2.10
2613 2992 1.063806 CTGCTCAGCGTCTTACACAC 58.936 55.000 0.00 0.00 0.00 3.82
2616 2995 1.344942 CTCAGCGTCTTACACACGGC 61.345 60.000 0.00 0.00 37.74 5.68
2617 2996 2.048503 AGCGTCTTACACACGGCC 60.049 61.111 0.00 0.00 37.74 6.13
2627 3006 1.447838 CACACGGCCGATGTAGCTT 60.448 57.895 35.90 2.60 0.00 3.74
2635 3014 0.030908 CCGATGTAGCTTCGACCCTC 59.969 60.000 7.85 0.00 38.88 4.30
2645 3024 2.513204 CGACCCTCGTCCGAGCTA 60.513 66.667 11.11 0.00 40.69 3.32
2652 3031 1.517361 TCGTCCGAGCTACGAGGTA 59.483 57.895 6.12 0.00 43.90 3.08
2676 3055 2.498726 CAGCCCGCTCCTCTTCTC 59.501 66.667 0.00 0.00 0.00 2.87
2682 3061 2.202864 GCTCCTCTTCTCGCAGCC 60.203 66.667 0.00 0.00 0.00 4.85
2683 3062 2.498726 CTCCTCTTCTCGCAGCCC 59.501 66.667 0.00 0.00 0.00 5.19
2684 3063 3.077556 TCCTCTTCTCGCAGCCCC 61.078 66.667 0.00 0.00 0.00 5.80
2685 3064 4.521062 CCTCTTCTCGCAGCCCCG 62.521 72.222 0.00 0.00 0.00 5.73
2688 3067 4.767255 CTTCTCGCAGCCCCGCTT 62.767 66.667 0.00 0.00 36.40 4.68
2698 3077 2.600173 CCCCGCTTGCTCCCAAAA 60.600 61.111 0.00 0.00 0.00 2.44
2699 3078 2.206536 CCCCGCTTGCTCCCAAAAA 61.207 57.895 0.00 0.00 0.00 1.94
2700 3079 1.543944 CCCCGCTTGCTCCCAAAAAT 61.544 55.000 0.00 0.00 0.00 1.82
2701 3080 0.390209 CCCGCTTGCTCCCAAAAATG 60.390 55.000 0.00 0.00 0.00 2.32
2702 3081 1.015607 CCGCTTGCTCCCAAAAATGC 61.016 55.000 0.00 0.00 0.00 3.56
2703 3082 0.037975 CGCTTGCTCCCAAAAATGCT 60.038 50.000 0.00 0.00 0.00 3.79
2704 3083 1.202114 CGCTTGCTCCCAAAAATGCTA 59.798 47.619 0.00 0.00 0.00 3.49
2705 3084 2.733227 CGCTTGCTCCCAAAAATGCTAG 60.733 50.000 0.00 0.00 0.00 3.42
2706 3085 2.493278 GCTTGCTCCCAAAAATGCTAGA 59.507 45.455 0.00 0.00 31.85 2.43
2707 3086 3.674410 GCTTGCTCCCAAAAATGCTAGAC 60.674 47.826 0.00 0.00 31.85 2.59
2708 3087 3.439857 TGCTCCCAAAAATGCTAGACT 57.560 42.857 0.00 0.00 0.00 3.24
2709 3088 3.766545 TGCTCCCAAAAATGCTAGACTT 58.233 40.909 0.00 0.00 0.00 3.01
2710 3089 4.917385 TGCTCCCAAAAATGCTAGACTTA 58.083 39.130 0.00 0.00 0.00 2.24
2711 3090 4.700213 TGCTCCCAAAAATGCTAGACTTAC 59.300 41.667 0.00 0.00 0.00 2.34
2712 3091 4.201822 GCTCCCAAAAATGCTAGACTTACG 60.202 45.833 0.00 0.00 0.00 3.18
2713 3092 4.901868 TCCCAAAAATGCTAGACTTACGT 58.098 39.130 0.00 0.00 0.00 3.57
2714 3093 6.040209 TCCCAAAAATGCTAGACTTACGTA 57.960 37.500 0.00 0.00 0.00 3.57
2715 3094 6.465948 TCCCAAAAATGCTAGACTTACGTAA 58.534 36.000 7.94 7.94 0.00 3.18
2716 3095 7.107542 TCCCAAAAATGCTAGACTTACGTAAT 58.892 34.615 8.76 0.00 0.00 1.89
2717 3096 7.065324 TCCCAAAAATGCTAGACTTACGTAATG 59.935 37.037 8.76 5.91 0.00 1.90
2718 3097 6.687105 CCAAAAATGCTAGACTTACGTAATGC 59.313 38.462 8.76 8.96 0.00 3.56
2719 3098 7.414098 CCAAAAATGCTAGACTTACGTAATGCT 60.414 37.037 8.76 11.24 0.00 3.79
2720 3099 6.589830 AAATGCTAGACTTACGTAATGCTG 57.410 37.500 8.76 0.00 0.00 4.41
2721 3100 4.713824 TGCTAGACTTACGTAATGCTGT 57.286 40.909 8.76 2.91 0.00 4.40
2722 3101 5.068234 TGCTAGACTTACGTAATGCTGTT 57.932 39.130 8.76 0.00 0.00 3.16
2723 3102 6.198650 TGCTAGACTTACGTAATGCTGTTA 57.801 37.500 8.76 0.00 0.00 2.41
2724 3103 6.032094 TGCTAGACTTACGTAATGCTGTTAC 58.968 40.000 8.76 3.41 0.00 2.50
2748 3127 7.620397 CGTATCCTACGTAATCCTTCTTTTC 57.380 40.000 0.00 0.00 46.41 2.29
2749 3128 6.640092 CGTATCCTACGTAATCCTTCTTTTCC 59.360 42.308 0.00 0.00 46.41 3.13
2750 3129 5.349061 TCCTACGTAATCCTTCTTTTCCC 57.651 43.478 0.00 0.00 0.00 3.97
2751 3130 5.028131 TCCTACGTAATCCTTCTTTTCCCT 58.972 41.667 0.00 0.00 0.00 4.20
2752 3131 6.197168 TCCTACGTAATCCTTCTTTTCCCTA 58.803 40.000 0.00 0.00 0.00 3.53
2753 3132 6.669154 TCCTACGTAATCCTTCTTTTCCCTAA 59.331 38.462 0.00 0.00 0.00 2.69
2754 3133 6.760298 CCTACGTAATCCTTCTTTTCCCTAAC 59.240 42.308 0.00 0.00 0.00 2.34
2755 3134 5.494724 ACGTAATCCTTCTTTTCCCTAACC 58.505 41.667 0.00 0.00 0.00 2.85
2756 3135 5.013391 ACGTAATCCTTCTTTTCCCTAACCA 59.987 40.000 0.00 0.00 0.00 3.67
2757 3136 5.941647 CGTAATCCTTCTTTTCCCTAACCAA 59.058 40.000 0.00 0.00 0.00 3.67
2758 3137 6.431852 CGTAATCCTTCTTTTCCCTAACCAAA 59.568 38.462 0.00 0.00 0.00 3.28
2759 3138 6.665992 AATCCTTCTTTTCCCTAACCAAAC 57.334 37.500 0.00 0.00 0.00 2.93
2760 3139 4.139038 TCCTTCTTTTCCCTAACCAAACG 58.861 43.478 0.00 0.00 0.00 3.60
2761 3140 3.305131 CCTTCTTTTCCCTAACCAAACGC 60.305 47.826 0.00 0.00 0.00 4.84
2762 3141 2.232399 TCTTTTCCCTAACCAAACGCC 58.768 47.619 0.00 0.00 0.00 5.68
2763 3142 1.271379 CTTTTCCCTAACCAAACGCCC 59.729 52.381 0.00 0.00 0.00 6.13
2764 3143 0.479378 TTTCCCTAACCAAACGCCCT 59.521 50.000 0.00 0.00 0.00 5.19
2765 3144 0.037160 TTCCCTAACCAAACGCCCTC 59.963 55.000 0.00 0.00 0.00 4.30
2766 3145 1.378119 CCCTAACCAAACGCCCTCC 60.378 63.158 0.00 0.00 0.00 4.30
2767 3146 1.378119 CCTAACCAAACGCCCTCCC 60.378 63.158 0.00 0.00 0.00 4.30
2768 3147 1.378119 CTAACCAAACGCCCTCCCC 60.378 63.158 0.00 0.00 0.00 4.81
2769 3148 2.831894 CTAACCAAACGCCCTCCCCC 62.832 65.000 0.00 0.00 0.00 5.40
2788 3167 2.583472 CTGATTTTCAGGGTGGGCC 58.417 57.895 0.00 0.00 40.71 5.80
2803 3182 3.335711 GCCCCAGCCTCCACTAAT 58.664 61.111 0.00 0.00 0.00 1.73
2804 3183 2.539983 GCCCCAGCCTCCACTAATA 58.460 57.895 0.00 0.00 0.00 0.98
2805 3184 1.068121 GCCCCAGCCTCCACTAATAT 58.932 55.000 0.00 0.00 0.00 1.28
2806 3185 1.003696 GCCCCAGCCTCCACTAATATC 59.996 57.143 0.00 0.00 0.00 1.63
2807 3186 1.630878 CCCCAGCCTCCACTAATATCC 59.369 57.143 0.00 0.00 0.00 2.59
2808 3187 2.338809 CCCAGCCTCCACTAATATCCA 58.661 52.381 0.00 0.00 0.00 3.41
2809 3188 2.711009 CCCAGCCTCCACTAATATCCAA 59.289 50.000 0.00 0.00 0.00 3.53
2810 3189 3.331889 CCCAGCCTCCACTAATATCCAAT 59.668 47.826 0.00 0.00 0.00 3.16
2811 3190 4.202609 CCCAGCCTCCACTAATATCCAATT 60.203 45.833 0.00 0.00 0.00 2.32
2812 3191 4.763793 CCAGCCTCCACTAATATCCAATTG 59.236 45.833 0.00 0.00 0.00 2.32
2813 3192 5.456619 CCAGCCTCCACTAATATCCAATTGA 60.457 44.000 7.12 0.00 0.00 2.57
2814 3193 6.064060 CAGCCTCCACTAATATCCAATTGAA 58.936 40.000 7.12 0.00 0.00 2.69
2815 3194 6.206243 CAGCCTCCACTAATATCCAATTGAAG 59.794 42.308 7.12 0.00 0.00 3.02
2816 3195 5.474876 GCCTCCACTAATATCCAATTGAAGG 59.525 44.000 7.12 0.00 0.00 3.46
2817 3196 5.474876 CCTCCACTAATATCCAATTGAAGGC 59.525 44.000 7.12 0.00 0.00 4.35
2818 3197 6.266131 TCCACTAATATCCAATTGAAGGCT 57.734 37.500 7.12 0.00 0.00 4.58
2819 3198 6.064060 TCCACTAATATCCAATTGAAGGCTG 58.936 40.000 7.12 0.00 0.00 4.85
2820 3199 5.278660 CCACTAATATCCAATTGAAGGCTGC 60.279 44.000 7.12 0.00 0.00 5.25
2821 3200 4.829492 ACTAATATCCAATTGAAGGCTGCC 59.171 41.667 11.65 11.65 0.00 4.85
2822 3201 2.824689 TATCCAATTGAAGGCTGCCA 57.175 45.000 22.65 0.00 0.00 4.92
2823 3202 1.941377 ATCCAATTGAAGGCTGCCAA 58.059 45.000 22.65 6.94 0.00 4.52
2824 3203 0.968405 TCCAATTGAAGGCTGCCAAC 59.032 50.000 22.65 14.32 0.00 3.77
2825 3204 0.971386 CCAATTGAAGGCTGCCAACT 59.029 50.000 22.65 4.36 0.00 3.16
2826 3205 1.067354 CCAATTGAAGGCTGCCAACTC 60.067 52.381 22.65 14.28 0.00 3.01
2827 3206 1.614903 CAATTGAAGGCTGCCAACTCA 59.385 47.619 22.65 16.71 0.00 3.41
2828 3207 2.226962 ATTGAAGGCTGCCAACTCAT 57.773 45.000 22.65 3.00 0.00 2.90
2829 3208 1.999648 TTGAAGGCTGCCAACTCATT 58.000 45.000 22.65 4.70 0.00 2.57
2830 3209 1.999648 TGAAGGCTGCCAACTCATTT 58.000 45.000 22.65 3.88 0.00 2.32
2831 3210 1.888512 TGAAGGCTGCCAACTCATTTC 59.111 47.619 22.65 13.89 0.00 2.17
2832 3211 1.888512 GAAGGCTGCCAACTCATTTCA 59.111 47.619 22.65 0.00 0.00 2.69
2833 3212 2.226962 AGGCTGCCAACTCATTTCAT 57.773 45.000 22.65 0.00 0.00 2.57
2834 3213 2.532843 AGGCTGCCAACTCATTTCATT 58.467 42.857 22.65 0.00 0.00 2.57
2835 3214 2.494870 AGGCTGCCAACTCATTTCATTC 59.505 45.455 22.65 0.00 0.00 2.67
2836 3215 2.523015 GCTGCCAACTCATTTCATTCG 58.477 47.619 0.00 0.00 0.00 3.34
2837 3216 2.095059 GCTGCCAACTCATTTCATTCGT 60.095 45.455 0.00 0.00 0.00 3.85
2838 3217 3.126858 GCTGCCAACTCATTTCATTCGTA 59.873 43.478 0.00 0.00 0.00 3.43
2839 3218 4.379394 GCTGCCAACTCATTTCATTCGTAA 60.379 41.667 0.00 0.00 0.00 3.18
2840 3219 5.295431 TGCCAACTCATTTCATTCGTAAG 57.705 39.130 0.00 0.00 0.00 2.34
2869 3248 8.382875 ACGTAAAAATATTTTCGTAGGTGTAGC 58.617 33.333 20.02 2.41 46.30 3.58
2870 3249 8.382130 CGTAAAAATATTTTCGTAGGTGTAGCA 58.618 33.333 13.68 0.00 35.42 3.49
2873 3252 9.567848 AAAAATATTTTCGTAGGTGTAGCATTG 57.432 29.630 13.68 0.00 0.00 2.82
2876 3255 2.579207 TCGTAGGTGTAGCATTGCTC 57.421 50.000 15.81 7.72 40.44 4.26
2887 3266 1.428219 CATTGCTCCTTGCTCGCTG 59.572 57.895 0.00 0.00 43.37 5.18
2888 3267 1.022982 CATTGCTCCTTGCTCGCTGA 61.023 55.000 0.00 0.00 43.37 4.26
2889 3268 0.107312 ATTGCTCCTTGCTCGCTGAT 60.107 50.000 0.00 0.00 43.37 2.90
2890 3269 0.742281 TTGCTCCTTGCTCGCTGATC 60.742 55.000 0.00 0.00 43.37 2.92
2891 3270 1.143620 GCTCCTTGCTCGCTGATCT 59.856 57.895 0.00 0.00 38.95 2.75
2893 3272 0.746063 CTCCTTGCTCGCTGATCTCT 59.254 55.000 0.00 0.00 0.00 3.10
2894 3273 0.743688 TCCTTGCTCGCTGATCTCTC 59.256 55.000 0.00 0.00 0.00 3.20
2895 3274 0.746063 CCTTGCTCGCTGATCTCTCT 59.254 55.000 0.00 0.00 0.00 3.10
2896 3275 1.269206 CCTTGCTCGCTGATCTCTCTC 60.269 57.143 0.00 0.00 0.00 3.20
2897 3276 1.677576 CTTGCTCGCTGATCTCTCTCT 59.322 52.381 0.00 0.00 0.00 3.10
2898 3277 1.761449 TGCTCGCTGATCTCTCTCTT 58.239 50.000 0.00 0.00 0.00 2.85
2899 3278 2.098614 TGCTCGCTGATCTCTCTCTTT 58.901 47.619 0.00 0.00 0.00 2.52
2900 3279 2.495270 TGCTCGCTGATCTCTCTCTTTT 59.505 45.455 0.00 0.00 0.00 2.27
2901 3280 3.115554 GCTCGCTGATCTCTCTCTTTTC 58.884 50.000 0.00 0.00 0.00 2.29
2902 3281 3.181487 GCTCGCTGATCTCTCTCTTTTCT 60.181 47.826 0.00 0.00 0.00 2.52
2903 3282 4.677779 GCTCGCTGATCTCTCTCTTTTCTT 60.678 45.833 0.00 0.00 0.00 2.52
2904 3283 5.398603 TCGCTGATCTCTCTCTTTTCTTT 57.601 39.130 0.00 0.00 0.00 2.52
2905 3284 5.788450 TCGCTGATCTCTCTCTTTTCTTTT 58.212 37.500 0.00 0.00 0.00 2.27
2906 3285 5.866633 TCGCTGATCTCTCTCTTTTCTTTTC 59.133 40.000 0.00 0.00 0.00 2.29
2907 3286 5.636965 CGCTGATCTCTCTCTTTTCTTTTCA 59.363 40.000 0.00 0.00 0.00 2.69
2908 3287 6.313411 CGCTGATCTCTCTCTTTTCTTTTCAT 59.687 38.462 0.00 0.00 0.00 2.57
2909 3288 7.148440 CGCTGATCTCTCTCTTTTCTTTTCATT 60.148 37.037 0.00 0.00 0.00 2.57
2929 3308 6.430451 TCATTTCTTTTCTTTTCTGTCGCTC 58.570 36.000 0.00 0.00 0.00 5.03
2952 3331 5.467035 CCTGCTGGGAAAAAGATACAAAA 57.533 39.130 0.71 0.00 37.23 2.44
2953 3332 5.852827 CCTGCTGGGAAAAAGATACAAAAA 58.147 37.500 0.71 0.00 37.23 1.94
2986 3827 3.579586 TCGCTAAGGGAAAAACTCTACCA 59.420 43.478 0.00 0.00 0.00 3.25
2987 3828 4.224370 TCGCTAAGGGAAAAACTCTACCAT 59.776 41.667 0.00 0.00 0.00 3.55
2991 3832 7.313646 GCTAAGGGAAAAACTCTACCATTTTC 58.686 38.462 0.00 0.00 40.57 2.29
2993 3834 9.734984 CTAAGGGAAAAACTCTACCATTTTCTA 57.265 33.333 9.31 0.00 40.90 2.10
2994 3835 7.997773 AGGGAAAAACTCTACCATTTTCTAC 57.002 36.000 9.31 4.61 40.90 2.59
2995 3836 6.653740 AGGGAAAAACTCTACCATTTTCTACG 59.346 38.462 9.31 0.00 40.90 3.51
3034 3876 8.616076 TCATGGTTTTTAAAATTTGTTTGCGAT 58.384 25.926 0.55 0.00 0.00 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.950680 CGCATTTTAGTTTTAGATACATCCAAT 57.049 29.630 0.00 0.00 0.00 3.16
10 11 8.952278 ACGCATTTTAGTTTTAGATACATCCAA 58.048 29.630 0.00 0.00 0.00 3.53
11 12 8.500753 ACGCATTTTAGTTTTAGATACATCCA 57.499 30.769 0.00 0.00 0.00 3.41
12 13 8.827677 AGACGCATTTTAGTTTTAGATACATCC 58.172 33.333 0.00 0.00 0.00 3.51
32 33 9.541143 TCATGAAAATAAATGTATCTAGACGCA 57.459 29.630 0.00 0.00 0.00 5.24
49 50 8.987890 CCGTTTGGAAATACTTTTCATGAAAAT 58.012 29.630 28.86 21.21 42.55 1.82
50 51 8.198109 TCCGTTTGGAAATACTTTTCATGAAAA 58.802 29.630 27.39 27.39 42.85 2.29
51 52 7.717568 TCCGTTTGGAAATACTTTTCATGAAA 58.282 30.769 16.91 16.91 42.85 2.69
52 53 7.278461 TCCGTTTGGAAATACTTTTCATGAA 57.722 32.000 3.38 3.38 42.85 2.57
53 54 6.072175 CCTCCGTTTGGAAATACTTTTCATGA 60.072 38.462 0.00 0.00 45.87 3.07
54 55 6.092748 CCTCCGTTTGGAAATACTTTTCATG 58.907 40.000 1.38 0.00 45.87 3.07
55 56 5.185056 CCCTCCGTTTGGAAATACTTTTCAT 59.815 40.000 1.38 0.00 45.87 2.57
56 57 4.521256 CCCTCCGTTTGGAAATACTTTTCA 59.479 41.667 1.38 0.00 45.87 2.69
57 58 4.763279 TCCCTCCGTTTGGAAATACTTTTC 59.237 41.667 0.00 0.00 45.87 2.29
58 59 4.732065 TCCCTCCGTTTGGAAATACTTTT 58.268 39.130 0.00 0.00 45.87 2.27
59 60 4.202535 ACTCCCTCCGTTTGGAAATACTTT 60.203 41.667 0.00 0.00 45.87 2.66
60 61 3.329814 ACTCCCTCCGTTTGGAAATACTT 59.670 43.478 0.00 0.00 45.87 2.24
61 62 2.910977 ACTCCCTCCGTTTGGAAATACT 59.089 45.455 0.00 0.00 45.87 2.12
62 63 3.345508 ACTCCCTCCGTTTGGAAATAC 57.654 47.619 0.00 0.00 45.87 1.89
63 64 4.472108 ACATACTCCCTCCGTTTGGAAATA 59.528 41.667 0.00 0.00 45.87 1.40
64 65 3.265995 ACATACTCCCTCCGTTTGGAAAT 59.734 43.478 0.00 0.00 45.87 2.17
65 66 2.640826 ACATACTCCCTCCGTTTGGAAA 59.359 45.455 0.00 0.00 45.87 3.13
66 67 2.262637 ACATACTCCCTCCGTTTGGAA 58.737 47.619 0.00 0.00 45.87 3.53
67 68 1.946984 ACATACTCCCTCCGTTTGGA 58.053 50.000 0.00 0.00 43.88 3.53
68 69 3.728845 CATACATACTCCCTCCGTTTGG 58.271 50.000 0.00 0.00 0.00 3.28
69 70 3.131396 GCATACATACTCCCTCCGTTTG 58.869 50.000 0.00 0.00 0.00 2.93
70 71 2.104281 GGCATACATACTCCCTCCGTTT 59.896 50.000 0.00 0.00 0.00 3.60
71 72 1.692519 GGCATACATACTCCCTCCGTT 59.307 52.381 0.00 0.00 0.00 4.44
72 73 1.339097 GGCATACATACTCCCTCCGT 58.661 55.000 0.00 0.00 0.00 4.69
73 74 1.338107 TGGCATACATACTCCCTCCG 58.662 55.000 0.00 0.00 0.00 4.63
74 75 4.373156 AATTGGCATACATACTCCCTCC 57.627 45.455 0.00 0.00 0.00 4.30
75 76 5.133221 ACAAATTGGCATACATACTCCCTC 58.867 41.667 0.00 0.00 0.00 4.30
76 77 5.129368 ACAAATTGGCATACATACTCCCT 57.871 39.130 0.00 0.00 0.00 4.20
77 78 5.852282 AACAAATTGGCATACATACTCCC 57.148 39.130 0.00 0.00 0.00 4.30
78 79 7.489113 CAGAAAACAAATTGGCATACATACTCC 59.511 37.037 0.00 0.00 0.00 3.85
79 80 7.009540 GCAGAAAACAAATTGGCATACATACTC 59.990 37.037 0.00 0.00 0.00 2.59
80 81 6.813152 GCAGAAAACAAATTGGCATACATACT 59.187 34.615 0.00 0.00 0.00 2.12
81 82 6.589523 TGCAGAAAACAAATTGGCATACATAC 59.410 34.615 0.00 0.00 0.00 2.39
82 83 6.695429 TGCAGAAAACAAATTGGCATACATA 58.305 32.000 0.00 0.00 0.00 2.29
83 84 5.549347 TGCAGAAAACAAATTGGCATACAT 58.451 33.333 0.00 0.00 0.00 2.29
84 85 4.953667 TGCAGAAAACAAATTGGCATACA 58.046 34.783 0.00 0.00 0.00 2.29
85 86 7.775397 ATATGCAGAAAACAAATTGGCATAC 57.225 32.000 12.21 0.00 43.11 2.39
86 87 9.311916 GTTATATGCAGAAAACAAATTGGCATA 57.688 29.630 12.31 12.31 44.04 3.14
87 88 7.280652 GGTTATATGCAGAAAACAAATTGGCAT 59.719 33.333 9.38 9.38 42.50 4.40
88 89 6.593382 GGTTATATGCAGAAAACAAATTGGCA 59.407 34.615 0.00 0.00 0.00 4.92
89 90 6.037062 GGGTTATATGCAGAAAACAAATTGGC 59.963 38.462 0.00 0.00 0.00 4.52
90 91 7.278424 CAGGGTTATATGCAGAAAACAAATTGG 59.722 37.037 0.00 0.00 0.00 3.16
91 92 7.278424 CCAGGGTTATATGCAGAAAACAAATTG 59.722 37.037 9.28 0.00 0.00 2.32
92 93 7.038373 ACCAGGGTTATATGCAGAAAACAAATT 60.038 33.333 9.28 0.00 0.00 1.82
93 94 6.440328 ACCAGGGTTATATGCAGAAAACAAAT 59.560 34.615 9.28 0.00 0.00 2.32
94 95 5.777732 ACCAGGGTTATATGCAGAAAACAAA 59.222 36.000 9.28 0.00 0.00 2.83
95 96 5.329399 ACCAGGGTTATATGCAGAAAACAA 58.671 37.500 9.28 0.00 0.00 2.83
96 97 4.929479 ACCAGGGTTATATGCAGAAAACA 58.071 39.130 9.28 0.00 0.00 2.83
97 98 4.338400 GGACCAGGGTTATATGCAGAAAAC 59.662 45.833 0.00 0.00 0.00 2.43
98 99 4.017958 TGGACCAGGGTTATATGCAGAAAA 60.018 41.667 0.00 0.00 0.00 2.29
99 100 3.525609 TGGACCAGGGTTATATGCAGAAA 59.474 43.478 0.00 0.00 0.00 2.52
100 101 3.119319 TGGACCAGGGTTATATGCAGAA 58.881 45.455 0.00 0.00 0.00 3.02
101 102 2.770447 TGGACCAGGGTTATATGCAGA 58.230 47.619 0.00 0.00 0.00 4.26
102 103 3.795688 ATGGACCAGGGTTATATGCAG 57.204 47.619 0.00 0.00 0.00 4.41
103 104 3.436325 CCAATGGACCAGGGTTATATGCA 60.436 47.826 0.00 0.00 0.00 3.96
104 105 3.157087 CCAATGGACCAGGGTTATATGC 58.843 50.000 0.00 0.00 0.00 3.14
105 106 4.453480 ACCAATGGACCAGGGTTATATG 57.547 45.455 6.16 0.00 0.00 1.78
106 107 4.352893 GGTACCAATGGACCAGGGTTATAT 59.647 45.833 21.94 3.75 35.65 0.86
107 108 3.717913 GGTACCAATGGACCAGGGTTATA 59.282 47.826 21.94 5.65 35.65 0.98
108 109 2.512476 GGTACCAATGGACCAGGGTTAT 59.488 50.000 21.94 4.37 35.65 1.89
109 110 1.917568 GGTACCAATGGACCAGGGTTA 59.082 52.381 21.94 8.76 35.65 2.85
110 111 0.702316 GGTACCAATGGACCAGGGTT 59.298 55.000 21.94 9.56 35.65 4.11
111 112 0.178843 AGGTACCAATGGACCAGGGT 60.179 55.000 20.88 20.88 38.27 4.34
112 113 0.255890 CAGGTACCAATGGACCAGGG 59.744 60.000 15.94 12.35 38.27 4.45
113 114 0.394352 GCAGGTACCAATGGACCAGG 60.394 60.000 15.94 12.76 38.27 4.45
114 115 0.620556 AGCAGGTACCAATGGACCAG 59.379 55.000 15.94 13.43 38.27 4.00
115 116 0.327924 CAGCAGGTACCAATGGACCA 59.672 55.000 15.94 0.00 38.27 4.02
116 117 0.394352 CCAGCAGGTACCAATGGACC 60.394 60.000 20.05 9.52 35.83 4.46
117 118 3.175133 CCAGCAGGTACCAATGGAC 57.825 57.895 20.05 0.00 32.55 4.02
125 126 5.749150 GCCATAGCTAAAACCAGCAGGTAC 61.749 50.000 0.00 0.00 44.35 3.34
126 127 3.684413 GCCATAGCTAAAACCAGCAGGTA 60.684 47.826 0.00 0.00 44.35 3.08
127 128 2.945890 GCCATAGCTAAAACCAGCAGGT 60.946 50.000 0.00 0.00 44.35 4.00
128 129 1.678101 GCCATAGCTAAAACCAGCAGG 59.322 52.381 0.00 0.00 44.35 4.85
129 130 2.357009 CTGCCATAGCTAAAACCAGCAG 59.643 50.000 0.00 6.58 44.35 4.24
130 131 2.026356 TCTGCCATAGCTAAAACCAGCA 60.026 45.455 0.00 0.25 44.35 4.41
131 132 2.615912 CTCTGCCATAGCTAAAACCAGC 59.384 50.000 0.00 0.00 42.12 4.85
132 133 2.615912 GCTCTGCCATAGCTAAAACCAG 59.384 50.000 0.00 2.80 40.80 4.00
133 134 2.643551 GCTCTGCCATAGCTAAAACCA 58.356 47.619 0.00 0.00 40.80 3.67
141 142 4.775295 CAGGAGCTCTGCCATAGC 57.225 61.111 14.64 0.00 40.40 2.97
148 149 7.613267 GTTCTGAAGAAATAGCAGGAGCTCTG 61.613 46.154 14.64 10.92 42.51 3.35
149 150 5.626578 GTTCTGAAGAAATAGCAGGAGCTCT 60.627 44.000 14.64 0.00 42.51 4.09
150 151 4.570369 GTTCTGAAGAAATAGCAGGAGCTC 59.430 45.833 4.71 4.71 42.51 4.09
151 152 4.512484 GTTCTGAAGAAATAGCAGGAGCT 58.488 43.478 0.00 0.00 44.39 4.09
152 153 3.308323 CGTTCTGAAGAAATAGCAGGAGC 59.692 47.826 0.00 0.00 37.06 4.70
153 154 4.499183 ACGTTCTGAAGAAATAGCAGGAG 58.501 43.478 0.00 0.00 35.58 3.69
154 155 4.537135 ACGTTCTGAAGAAATAGCAGGA 57.463 40.909 0.00 0.00 35.58 3.86
155 156 4.690748 TCAACGTTCTGAAGAAATAGCAGG 59.309 41.667 0.00 0.00 35.58 4.85
156 157 5.845985 TCAACGTTCTGAAGAAATAGCAG 57.154 39.130 0.00 0.00 35.58 4.24
157 158 7.899178 TTATCAACGTTCTGAAGAAATAGCA 57.101 32.000 0.00 0.00 35.58 3.49
163 164 9.443323 TGGATTATTTATCAACGTTCTGAAGAA 57.557 29.630 0.00 0.00 34.77 2.52
164 165 8.879759 GTGGATTATTTATCAACGTTCTGAAGA 58.120 33.333 0.00 0.00 34.77 2.87
165 166 8.883731 AGTGGATTATTTATCAACGTTCTGAAG 58.116 33.333 0.00 0.00 41.39 3.02
166 167 8.786826 AGTGGATTATTTATCAACGTTCTGAA 57.213 30.769 0.00 0.00 41.39 3.02
167 168 8.664798 CAAGTGGATTATTTATCAACGTTCTGA 58.335 33.333 0.00 0.00 41.39 3.27
168 169 8.450964 ACAAGTGGATTATTTATCAACGTTCTG 58.549 33.333 0.00 0.00 41.39 3.02
169 170 8.450964 CACAAGTGGATTATTTATCAACGTTCT 58.549 33.333 0.00 0.00 41.39 3.01
170 171 8.234546 ACACAAGTGGATTATTTATCAACGTTC 58.765 33.333 0.00 0.00 41.39 3.95
171 172 8.106247 ACACAAGTGGATTATTTATCAACGTT 57.894 30.769 5.08 0.00 41.39 3.99
172 173 7.389330 TGACACAAGTGGATTATTTATCAACGT 59.611 33.333 5.08 0.00 41.39 3.99
173 174 7.747888 TGACACAAGTGGATTATTTATCAACG 58.252 34.615 5.08 0.00 41.39 4.10
174 175 9.722056 GATGACACAAGTGGATTATTTATCAAC 57.278 33.333 5.08 0.00 37.45 3.18
175 176 9.685276 AGATGACACAAGTGGATTATTTATCAA 57.315 29.630 5.08 0.00 34.77 2.57
176 177 9.112725 CAGATGACACAAGTGGATTATTTATCA 57.887 33.333 5.08 0.00 34.77 2.15
177 178 8.072567 GCAGATGACACAAGTGGATTATTTATC 58.927 37.037 5.08 0.00 34.19 1.75
178 179 7.013655 GGCAGATGACACAAGTGGATTATTTAT 59.986 37.037 5.08 0.00 34.19 1.40
179 180 6.318648 GGCAGATGACACAAGTGGATTATTTA 59.681 38.462 5.08 0.00 34.19 1.40
180 181 5.126061 GGCAGATGACACAAGTGGATTATTT 59.874 40.000 5.08 0.00 34.19 1.40
181 182 4.641989 GGCAGATGACACAAGTGGATTATT 59.358 41.667 5.08 0.00 34.19 1.40
182 183 4.202441 GGCAGATGACACAAGTGGATTAT 58.798 43.478 5.08 0.00 34.19 1.28
183 184 3.008923 TGGCAGATGACACAAGTGGATTA 59.991 43.478 5.08 0.00 34.19 1.75
184 185 2.224843 TGGCAGATGACACAAGTGGATT 60.225 45.455 5.08 0.00 34.19 3.01
185 186 1.352017 TGGCAGATGACACAAGTGGAT 59.648 47.619 5.08 0.00 34.19 3.41
186 187 0.764271 TGGCAGATGACACAAGTGGA 59.236 50.000 5.08 0.00 34.19 4.02
187 188 1.538512 CTTGGCAGATGACACAAGTGG 59.461 52.381 5.08 0.00 36.47 4.00
188 189 1.068748 GCTTGGCAGATGACACAAGTG 60.069 52.381 0.00 0.00 41.65 3.16
189 190 1.242076 GCTTGGCAGATGACACAAGT 58.758 50.000 0.00 0.00 41.65 3.16
190 191 0.167470 CGCTTGGCAGATGACACAAG 59.833 55.000 0.00 0.00 42.31 3.16
191 192 0.534877 ACGCTTGGCAGATGACACAA 60.535 50.000 0.00 0.00 29.05 3.33
192 193 0.950555 GACGCTTGGCAGATGACACA 60.951 55.000 0.00 0.00 29.05 3.72
193 194 0.671781 AGACGCTTGGCAGATGACAC 60.672 55.000 0.00 0.00 29.05 3.67
194 195 0.390340 GAGACGCTTGGCAGATGACA 60.390 55.000 0.00 0.00 0.00 3.58
195 196 1.086634 GGAGACGCTTGGCAGATGAC 61.087 60.000 0.00 0.00 0.00 3.06
196 197 1.219124 GGAGACGCTTGGCAGATGA 59.781 57.895 0.00 0.00 0.00 2.92
197 198 0.463295 ATGGAGACGCTTGGCAGATG 60.463 55.000 0.00 0.00 0.00 2.90
198 199 0.254178 AATGGAGACGCTTGGCAGAT 59.746 50.000 0.00 0.00 0.00 2.90
199 200 0.036732 AAATGGAGACGCTTGGCAGA 59.963 50.000 0.00 0.00 0.00 4.26
200 201 1.398390 GTAAATGGAGACGCTTGGCAG 59.602 52.381 0.00 0.00 0.00 4.85
201 202 1.003118 AGTAAATGGAGACGCTTGGCA 59.997 47.619 0.00 0.00 0.00 4.92
202 203 1.666189 GAGTAAATGGAGACGCTTGGC 59.334 52.381 0.00 0.00 0.00 4.52
203 204 3.252974 AGAGTAAATGGAGACGCTTGG 57.747 47.619 0.00 0.00 0.00 3.61
204 205 6.910536 AAATAGAGTAAATGGAGACGCTTG 57.089 37.500 0.00 0.00 0.00 4.01
205 206 7.331791 AGAAAATAGAGTAAATGGAGACGCTT 58.668 34.615 0.00 0.00 0.00 4.68
206 207 6.879400 AGAAAATAGAGTAAATGGAGACGCT 58.121 36.000 0.00 0.00 0.00 5.07
207 208 7.492994 AGAAGAAAATAGAGTAAATGGAGACGC 59.507 37.037 0.00 0.00 0.00 5.19
208 209 8.934507 AGAAGAAAATAGAGTAAATGGAGACG 57.065 34.615 0.00 0.00 0.00 4.18
209 210 9.877178 TGAGAAGAAAATAGAGTAAATGGAGAC 57.123 33.333 0.00 0.00 0.00 3.36
243 244 3.636764 ACCCTTTCGAGTCTGCAATTTTT 59.363 39.130 0.00 0.00 0.00 1.94
244 245 3.222603 ACCCTTTCGAGTCTGCAATTTT 58.777 40.909 0.00 0.00 0.00 1.82
245 246 2.863809 ACCCTTTCGAGTCTGCAATTT 58.136 42.857 0.00 0.00 0.00 1.82
246 247 2.568623 ACCCTTTCGAGTCTGCAATT 57.431 45.000 0.00 0.00 0.00 2.32
247 248 3.914426 ATACCCTTTCGAGTCTGCAAT 57.086 42.857 0.00 0.00 0.00 3.56
248 249 4.020928 TGTTATACCCTTTCGAGTCTGCAA 60.021 41.667 0.00 0.00 0.00 4.08
249 250 3.512329 TGTTATACCCTTTCGAGTCTGCA 59.488 43.478 0.00 0.00 0.00 4.41
250 251 4.113354 CTGTTATACCCTTTCGAGTCTGC 58.887 47.826 0.00 0.00 0.00 4.26
251 252 5.125739 ACTCTGTTATACCCTTTCGAGTCTG 59.874 44.000 0.00 0.00 0.00 3.51
252 253 5.262804 ACTCTGTTATACCCTTTCGAGTCT 58.737 41.667 0.00 0.00 0.00 3.24
253 254 5.579564 ACTCTGTTATACCCTTTCGAGTC 57.420 43.478 0.00 0.00 0.00 3.36
254 255 7.472334 TTTACTCTGTTATACCCTTTCGAGT 57.528 36.000 0.00 0.00 35.06 4.18
255 256 7.010275 GCTTTTACTCTGTTATACCCTTTCGAG 59.990 40.741 0.00 0.00 0.00 4.04
256 257 6.815142 GCTTTTACTCTGTTATACCCTTTCGA 59.185 38.462 0.00 0.00 0.00 3.71
257 258 6.817140 AGCTTTTACTCTGTTATACCCTTTCG 59.183 38.462 0.00 0.00 0.00 3.46
258 259 9.315525 CTAGCTTTTACTCTGTTATACCCTTTC 57.684 37.037 0.00 0.00 0.00 2.62
259 260 7.769507 GCTAGCTTTTACTCTGTTATACCCTTT 59.230 37.037 7.70 0.00 0.00 3.11
260 261 7.125963 AGCTAGCTTTTACTCTGTTATACCCTT 59.874 37.037 12.68 0.00 0.00 3.95
261 262 6.612049 AGCTAGCTTTTACTCTGTTATACCCT 59.388 38.462 12.68 0.00 0.00 4.34
262 263 6.818233 AGCTAGCTTTTACTCTGTTATACCC 58.182 40.000 12.68 0.00 0.00 3.69
263 264 7.224949 CCAAGCTAGCTTTTACTCTGTTATACC 59.775 40.741 27.34 0.00 33.42 2.73
287 288 5.571791 ACTAAGCTAACAGTAAAACCCCA 57.428 39.130 0.00 0.00 0.00 4.96
301 303 8.842358 ACACAGTAAAAGCAATAACTAAGCTA 57.158 30.769 0.00 0.00 37.70 3.32
309 311 7.359595 CAAGCAGTACACAGTAAAAGCAATAA 58.640 34.615 0.00 0.00 0.00 1.40
321 323 1.129251 CAATCCGCAAGCAGTACACAG 59.871 52.381 0.00 0.00 0.00 3.66
325 327 2.420022 ACAATCAATCCGCAAGCAGTAC 59.580 45.455 0.00 0.00 0.00 2.73
328 330 1.904144 CACAATCAATCCGCAAGCAG 58.096 50.000 0.00 0.00 0.00 4.24
330 332 0.109179 TGCACAATCAATCCGCAAGC 60.109 50.000 0.00 0.00 0.00 4.01
331 333 1.068402 TGTGCACAATCAATCCGCAAG 60.068 47.619 19.28 0.00 33.76 4.01
332 334 0.957362 TGTGCACAATCAATCCGCAA 59.043 45.000 19.28 0.00 33.76 4.85
333 335 0.240678 GTGTGCACAATCAATCCGCA 59.759 50.000 23.59 0.00 0.00 5.69
334 336 0.523072 AGTGTGCACAATCAATCCGC 59.477 50.000 23.59 5.59 0.00 5.54
335 337 2.030893 ACAAGTGTGCACAATCAATCCG 60.031 45.455 23.59 8.03 0.00 4.18
336 338 3.648339 ACAAGTGTGCACAATCAATCC 57.352 42.857 23.59 7.22 0.00 3.01
337 339 5.362556 AGTACAAGTGTGCACAATCAATC 57.637 39.130 23.59 8.04 32.87 2.67
338 340 5.772825 AAGTACAAGTGTGCACAATCAAT 57.227 34.783 23.59 11.86 32.87 2.57
339 341 5.574891 AAAGTACAAGTGTGCACAATCAA 57.425 34.783 23.59 6.59 32.87 2.57
345 356 3.350912 CGACAAAAGTACAAGTGTGCAC 58.649 45.455 10.75 10.75 32.87 4.57
358 369 1.411394 CAACCAGCATGCGACAAAAG 58.589 50.000 13.01 0.00 31.97 2.27
405 416 2.011947 ACGACATGCATCAACTCCATG 58.988 47.619 0.00 0.00 41.49 3.66
431 445 6.501781 AGTTACATGAGTACGTACATTAGGC 58.498 40.000 26.55 10.01 0.00 3.93
473 487 6.327934 ACGCGTACATGTAGAAGAGTATTTT 58.672 36.000 11.67 0.00 0.00 1.82
474 488 5.888105 ACGCGTACATGTAGAAGAGTATTT 58.112 37.500 11.67 0.00 0.00 1.40
475 489 5.065602 TGACGCGTACATGTAGAAGAGTATT 59.934 40.000 13.97 0.00 0.00 1.89
476 490 4.573607 TGACGCGTACATGTAGAAGAGTAT 59.426 41.667 13.97 0.00 0.00 2.12
506 520 6.947644 TGCAGTCTACCTAATATAACGTGA 57.052 37.500 0.00 0.00 0.00 4.35
524 538 2.869233 ATTGTTTTGACGCTTGCAGT 57.131 40.000 0.00 0.00 0.00 4.40
527 541 3.552604 TCCTATTGTTTTGACGCTTGC 57.447 42.857 0.00 0.00 0.00 4.01
552 566 5.233988 CGGTAATCAATCATCTCCTCTTCC 58.766 45.833 0.00 0.00 0.00 3.46
563 577 2.296792 CATGTGGCCGGTAATCAATCA 58.703 47.619 1.90 0.00 0.00 2.57
635 650 2.093152 CGATGTTTACGTGGCTTGTACC 59.907 50.000 0.00 0.00 0.00 3.34
640 655 1.435577 GGTCGATGTTTACGTGGCTT 58.564 50.000 0.00 0.00 0.00 4.35
646 661 1.015085 TTGGCGGGTCGATGTTTACG 61.015 55.000 0.00 0.00 0.00 3.18
730 745 9.778741 AGTGAATTATTCAGTCTTGAGTGTAAA 57.221 29.630 8.00 0.69 39.00 2.01
744 759 5.412594 GGTGTCAAGCTCAGTGAATTATTCA 59.587 40.000 3.20 3.20 37.33 2.57
752 767 0.106708 GGTGGTGTCAAGCTCAGTGA 59.893 55.000 0.00 0.00 0.00 3.41
771 786 1.669115 CGAAGGCAGGTCACAGGTG 60.669 63.158 0.00 0.00 0.00 4.00
772 787 2.743718 CGAAGGCAGGTCACAGGT 59.256 61.111 0.00 0.00 0.00 4.00
773 788 2.046892 CCGAAGGCAGGTCACAGG 60.047 66.667 0.00 0.00 46.14 4.00
787 802 0.533308 GGTTGTTGTAGTGGTGCCGA 60.533 55.000 0.00 0.00 0.00 5.54
824 839 1.677637 GGATGAGGAGGTGACCCGTC 61.678 65.000 0.00 1.92 35.12 4.79
825 840 1.686110 GGATGAGGAGGTGACCCGT 60.686 63.158 0.00 0.00 35.12 5.28
829 844 0.908198 AGCTTGGATGAGGAGGTGAC 59.092 55.000 0.00 0.00 0.00 3.67
834 849 2.680312 TTTCGAGCTTGGATGAGGAG 57.320 50.000 0.00 0.00 0.00 3.69
836 851 5.991606 TGTATATTTTCGAGCTTGGATGAGG 59.008 40.000 0.00 0.00 0.00 3.86
841 856 4.574828 GGCTTGTATATTTTCGAGCTTGGA 59.425 41.667 0.00 0.00 39.99 3.53
843 858 4.552767 CGGGCTTGTATATTTTCGAGCTTG 60.553 45.833 0.00 0.00 39.99 4.01
853 868 2.404559 TCTCCCACGGGCTTGTATATT 58.595 47.619 0.00 0.00 34.68 1.28
861 876 4.724279 ATATATTTTTCTCCCACGGGCT 57.276 40.909 0.00 0.00 34.68 5.19
866 881 9.998106 TCAAGTAGCTATATATTTTTCTCCCAC 57.002 33.333 0.00 0.00 0.00 4.61
909 924 8.627403 CCAAGTCCGTCTAAGTTCTTATGTATA 58.373 37.037 0.00 0.00 0.00 1.47
910 925 7.490000 CCAAGTCCGTCTAAGTTCTTATGTAT 58.510 38.462 0.00 0.00 0.00 2.29
919 934 2.367567 TGAAGCCAAGTCCGTCTAAGTT 59.632 45.455 0.00 0.00 0.00 2.66
922 937 3.767673 ACTATGAAGCCAAGTCCGTCTAA 59.232 43.478 0.00 0.00 0.00 2.10
930 945 8.540388 TCTCTAATAACAACTATGAAGCCAAGT 58.460 33.333 0.00 0.00 0.00 3.16
935 950 8.198109 TCAGGTCTCTAATAACAACTATGAAGC 58.802 37.037 0.00 0.00 0.00 3.86
950 965 6.150140 GGACGTAACTTAAGTCAGGTCTCTAA 59.850 42.308 24.00 0.00 38.65 2.10
977 992 2.092323 GCGGGGCTAATTCAAACTCTT 58.908 47.619 0.00 0.00 0.00 2.85
982 997 0.623723 AGGAGCGGGGCTAATTCAAA 59.376 50.000 0.00 0.00 39.88 2.69
1028 1043 5.821470 ACTGATTTGGAGATCTATGCAAGTG 59.179 40.000 0.00 0.00 31.79 3.16
1043 1058 2.224402 GGGGCTAGCTAGACTGATTTGG 60.224 54.545 25.73 0.00 0.00 3.28
1063 1078 1.949525 CATTATTGACTCGCCAAGGGG 59.050 52.381 0.00 0.00 37.18 4.79
1155 1174 0.953960 GGTTGTACTTCTGGCCGTGG 60.954 60.000 0.00 0.00 0.00 4.94
1233 1255 3.716195 TGGATGGAGCGGTGTGGG 61.716 66.667 0.00 0.00 0.00 4.61
1293 1315 0.179062 CAATGAGAGGGAAGGAGCCG 60.179 60.000 0.00 0.00 0.00 5.52
1399 1421 2.030007 GCGTAGTTGTAGGTGGTGTACA 60.030 50.000 0.00 0.00 0.00 2.90
1553 1575 1.531677 CCAGACGCCGCAAATATGTTG 60.532 52.381 0.00 0.00 0.00 3.33
1554 1576 0.732571 CCAGACGCCGCAAATATGTT 59.267 50.000 0.00 0.00 0.00 2.71
1595 1617 3.131577 GTGTCGACATGTGGTCCCTATAA 59.868 47.826 23.12 0.00 43.95 0.98
1616 1638 2.408050 GTGATCACGTTCAAGCTCAGT 58.592 47.619 10.69 0.00 0.00 3.41
1699 1721 1.625315 TCATCCACCTGAACACCTCTG 59.375 52.381 0.00 0.00 0.00 3.35
1700 1722 2.030027 TCATCCACCTGAACACCTCT 57.970 50.000 0.00 0.00 0.00 3.69
1743 1802 1.077212 CCCTGCAAGTCCATCCAGG 60.077 63.158 0.00 0.00 43.47 4.45
1754 1813 4.690719 CCGCACGTACCCCTGCAA 62.691 66.667 0.00 0.00 32.57 4.08
1914 2277 1.024579 CACCCTTGGGCACGTCATAC 61.025 60.000 5.46 0.00 0.00 2.39
1917 2280 4.947147 GCACCCTTGGGCACGTCA 62.947 66.667 5.46 0.00 0.00 4.35
1990 2353 1.984570 CTGGCCTGAACTCCTCCGA 60.985 63.158 3.32 0.00 0.00 4.55
2046 2409 3.483352 TGGAAGAAGCTCCAGGTCT 57.517 52.632 0.00 0.00 40.71 3.85
2134 2497 1.453155 GTGAACCCATGCAGTAGGTG 58.547 55.000 5.90 0.00 33.05 4.00
2145 2508 1.836391 CAGTGTCCAGGTGAACCCA 59.164 57.895 0.00 0.00 36.42 4.51
2176 2539 1.633915 ATGCTCAGCTCCTCCTTGGG 61.634 60.000 0.00 0.00 36.20 4.12
2177 2540 0.464013 CATGCTCAGCTCCTCCTTGG 60.464 60.000 0.00 0.00 37.10 3.61
2178 2541 0.464013 CCATGCTCAGCTCCTCCTTG 60.464 60.000 0.00 0.00 0.00 3.61
2262 2625 4.961730 ACTCAAAGATAGAGATGAGCAGGT 59.038 41.667 1.77 0.00 42.34 4.00
2293 2656 1.065491 ACCATACCACATGCATGACGT 60.065 47.619 32.75 25.96 0.00 4.34
2307 2670 7.216973 AGACTAGTATTCCGATGAACCATAC 57.783 40.000 0.00 0.00 32.13 2.39
2370 2733 4.460263 ACATACTTGTCTTGAGCAACCAA 58.540 39.130 0.00 0.00 0.00 3.67
2372 2735 5.348997 GTCTACATACTTGTCTTGAGCAACC 59.651 44.000 0.00 0.00 37.28 3.77
2398 2762 7.930325 AGTACAAACTTTGAGGTAACTAGGTTC 59.070 37.037 8.55 0.00 39.64 3.62
2413 2777 4.877251 TGTCGCTGGTTTAGTACAAACTTT 59.123 37.500 15.66 0.00 37.15 2.66
2420 2784 8.280497 CCATATTATTTGTCGCTGGTTTAGTAC 58.720 37.037 0.00 0.00 0.00 2.73
2435 2799 8.993121 AGTACTTGCTTCGATCCATATTATTTG 58.007 33.333 0.00 0.00 0.00 2.32
2452 2816 9.769677 TGATATCCCACTTATATAGTACTTGCT 57.230 33.333 0.00 0.00 34.56 3.91
2468 2832 4.346418 AGATGGTGAACTCTGATATCCCAC 59.654 45.833 0.00 0.00 0.00 4.61
2479 2843 6.861065 TTGACTTTACAAGATGGTGAACTC 57.139 37.500 0.00 0.00 0.00 3.01
2484 2848 7.489113 GCCAATTATTGACTTTACAAGATGGTG 59.511 37.037 6.50 0.00 33.22 4.17
2485 2849 7.178274 TGCCAATTATTGACTTTACAAGATGGT 59.822 33.333 6.50 0.00 33.22 3.55
2519 2883 2.124151 GCATCTTGACCCGGCCAT 60.124 61.111 2.24 0.00 0.00 4.40
2522 2886 0.532115 AAAATGCATCTTGACCCGGC 59.468 50.000 0.00 0.00 0.00 6.13
2544 2908 3.364964 GGAAAACGTAGTGCACCATGAAG 60.365 47.826 14.63 1.67 45.00 3.02
2545 2909 2.550606 GGAAAACGTAGTGCACCATGAA 59.449 45.455 14.63 0.00 45.00 2.57
2546 2910 2.147958 GGAAAACGTAGTGCACCATGA 58.852 47.619 14.63 0.00 45.00 3.07
2547 2911 1.199097 GGGAAAACGTAGTGCACCATG 59.801 52.381 14.63 8.28 45.00 3.66
2549 2913 0.470766 AGGGAAAACGTAGTGCACCA 59.529 50.000 14.63 0.00 45.00 4.17
2550 2914 1.601166 AAGGGAAAACGTAGTGCACC 58.399 50.000 14.63 0.00 45.00 5.01
2551 2915 3.703286 AAAAGGGAAAACGTAGTGCAC 57.297 42.857 9.40 9.40 45.00 4.57
2556 2920 8.468720 TTCAAAAAGAAAAAGGGAAAACGTAG 57.531 30.769 0.00 0.00 32.05 3.51
2557 2921 8.828688 TTTCAAAAAGAAAAAGGGAAAACGTA 57.171 26.923 0.00 0.00 43.00 3.57
2586 2958 1.775039 GACGCTGAGCAGTGCAACAA 61.775 55.000 19.20 0.00 42.40 2.83
2608 2987 2.125673 GCTACATCGGCCGTGTGT 60.126 61.111 30.75 30.73 0.00 3.72
2613 2992 1.944676 GTCGAAGCTACATCGGCCG 60.945 63.158 22.12 22.12 38.90 6.13
2616 2995 0.030908 GAGGGTCGAAGCTACATCGG 59.969 60.000 6.46 0.00 40.59 4.18
2617 2996 0.317103 CGAGGGTCGAAGCTACATCG 60.317 60.000 0.00 0.00 43.74 3.84
2627 3006 3.022710 TAGCTCGGACGAGGGTCGA 62.023 63.158 21.57 0.88 43.74 4.20
2635 3014 0.809241 AGTACCTCGTAGCTCGGACG 60.809 60.000 0.98 0.98 41.69 4.79
2645 3024 1.592223 GGCTGCTTGAGTACCTCGT 59.408 57.895 0.00 0.00 32.35 4.18
2659 3038 2.498726 GAGAAGAGGAGCGGGCTG 59.501 66.667 0.00 0.00 0.00 4.85
2682 3061 0.390209 CATTTTTGGGAGCAAGCGGG 60.390 55.000 0.00 0.00 0.00 6.13
2683 3062 1.015607 GCATTTTTGGGAGCAAGCGG 61.016 55.000 0.00 0.00 0.00 5.52
2684 3063 0.037975 AGCATTTTTGGGAGCAAGCG 60.038 50.000 0.00 0.00 0.00 4.68
2685 3064 2.493278 TCTAGCATTTTTGGGAGCAAGC 59.507 45.455 0.00 0.00 0.00 4.01
2686 3065 3.760684 AGTCTAGCATTTTTGGGAGCAAG 59.239 43.478 0.00 0.00 0.00 4.01
2687 3066 3.766545 AGTCTAGCATTTTTGGGAGCAA 58.233 40.909 0.00 0.00 0.00 3.91
2688 3067 3.439857 AGTCTAGCATTTTTGGGAGCA 57.560 42.857 0.00 0.00 0.00 4.26
2689 3068 4.201822 CGTAAGTCTAGCATTTTTGGGAGC 60.202 45.833 0.00 0.00 0.00 4.70
2690 3069 5.470845 CGTAAGTCTAGCATTTTTGGGAG 57.529 43.478 0.00 0.00 0.00 4.30
2725 3104 6.927936 GGGAAAAGAAGGATTACGTAGGATAC 59.072 42.308 0.00 0.00 38.50 2.24
2726 3105 6.842807 AGGGAAAAGAAGGATTACGTAGGATA 59.157 38.462 0.00 0.00 0.00 2.59
2727 3106 5.666265 AGGGAAAAGAAGGATTACGTAGGAT 59.334 40.000 0.00 0.00 0.00 3.24
2728 3107 5.028131 AGGGAAAAGAAGGATTACGTAGGA 58.972 41.667 0.00 0.00 0.00 2.94
2729 3108 5.354842 AGGGAAAAGAAGGATTACGTAGG 57.645 43.478 0.00 0.00 0.00 3.18
2730 3109 6.760298 GGTTAGGGAAAAGAAGGATTACGTAG 59.240 42.308 0.00 0.00 0.00 3.51
2731 3110 6.213195 TGGTTAGGGAAAAGAAGGATTACGTA 59.787 38.462 0.00 0.00 0.00 3.57
2732 3111 5.013391 TGGTTAGGGAAAAGAAGGATTACGT 59.987 40.000 0.00 0.00 0.00 3.57
2733 3112 5.493809 TGGTTAGGGAAAAGAAGGATTACG 58.506 41.667 0.00 0.00 0.00 3.18
2734 3113 7.574404 CGTTTGGTTAGGGAAAAGAAGGATTAC 60.574 40.741 0.00 0.00 0.00 1.89
2735 3114 6.431852 CGTTTGGTTAGGGAAAAGAAGGATTA 59.568 38.462 0.00 0.00 0.00 1.75
2736 3115 5.243060 CGTTTGGTTAGGGAAAAGAAGGATT 59.757 40.000 0.00 0.00 0.00 3.01
2737 3116 4.765339 CGTTTGGTTAGGGAAAAGAAGGAT 59.235 41.667 0.00 0.00 0.00 3.24
2738 3117 4.139038 CGTTTGGTTAGGGAAAAGAAGGA 58.861 43.478 0.00 0.00 0.00 3.36
2739 3118 3.305131 GCGTTTGGTTAGGGAAAAGAAGG 60.305 47.826 0.00 0.00 0.00 3.46
2740 3119 3.305131 GGCGTTTGGTTAGGGAAAAGAAG 60.305 47.826 0.00 0.00 0.00 2.85
2741 3120 2.624364 GGCGTTTGGTTAGGGAAAAGAA 59.376 45.455 0.00 0.00 0.00 2.52
2742 3121 2.232399 GGCGTTTGGTTAGGGAAAAGA 58.768 47.619 0.00 0.00 0.00 2.52
2743 3122 1.271379 GGGCGTTTGGTTAGGGAAAAG 59.729 52.381 0.00 0.00 0.00 2.27
2744 3123 1.133419 AGGGCGTTTGGTTAGGGAAAA 60.133 47.619 0.00 0.00 0.00 2.29
2745 3124 0.479378 AGGGCGTTTGGTTAGGGAAA 59.521 50.000 0.00 0.00 0.00 3.13
2746 3125 0.037160 GAGGGCGTTTGGTTAGGGAA 59.963 55.000 0.00 0.00 0.00 3.97
2747 3126 1.681076 GAGGGCGTTTGGTTAGGGA 59.319 57.895 0.00 0.00 0.00 4.20
2748 3127 1.378119 GGAGGGCGTTTGGTTAGGG 60.378 63.158 0.00 0.00 0.00 3.53
2749 3128 1.378119 GGGAGGGCGTTTGGTTAGG 60.378 63.158 0.00 0.00 0.00 2.69
2750 3129 1.378119 GGGGAGGGCGTTTGGTTAG 60.378 63.158 0.00 0.00 0.00 2.34
2751 3130 2.758434 GGGGAGGGCGTTTGGTTA 59.242 61.111 0.00 0.00 0.00 2.85
2752 3131 4.295199 GGGGGAGGGCGTTTGGTT 62.295 66.667 0.00 0.00 0.00 3.67
2770 3149 2.583472 GGCCCACCCTGAAAATCAG 58.417 57.895 0.00 0.32 43.91 2.90
2771 3150 4.863415 GGCCCACCCTGAAAATCA 57.137 55.556 0.00 0.00 0.00 2.57
2786 3165 1.003696 GATATTAGTGGAGGCTGGGGC 59.996 57.143 0.00 0.00 37.82 5.80
2787 3166 1.630878 GGATATTAGTGGAGGCTGGGG 59.369 57.143 0.00 0.00 0.00 4.96
2788 3167 2.338809 TGGATATTAGTGGAGGCTGGG 58.661 52.381 0.00 0.00 0.00 4.45
2789 3168 4.647564 ATTGGATATTAGTGGAGGCTGG 57.352 45.455 0.00 0.00 0.00 4.85
2790 3169 5.624159 TCAATTGGATATTAGTGGAGGCTG 58.376 41.667 5.42 0.00 0.00 4.85
2791 3170 5.912149 TCAATTGGATATTAGTGGAGGCT 57.088 39.130 5.42 0.00 0.00 4.58
2792 3171 5.474876 CCTTCAATTGGATATTAGTGGAGGC 59.525 44.000 5.42 0.00 0.00 4.70
2793 3172 5.474876 GCCTTCAATTGGATATTAGTGGAGG 59.525 44.000 5.42 0.00 0.00 4.30
2794 3173 6.206243 CAGCCTTCAATTGGATATTAGTGGAG 59.794 42.308 5.42 0.00 0.00 3.86
2795 3174 6.064060 CAGCCTTCAATTGGATATTAGTGGA 58.936 40.000 5.42 0.00 0.00 4.02
2796 3175 5.278660 GCAGCCTTCAATTGGATATTAGTGG 60.279 44.000 5.42 0.00 0.00 4.00
2797 3176 5.278660 GGCAGCCTTCAATTGGATATTAGTG 60.279 44.000 3.29 0.00 0.00 2.74
2798 3177 4.829492 GGCAGCCTTCAATTGGATATTAGT 59.171 41.667 3.29 0.00 0.00 2.24
2799 3178 4.828939 TGGCAGCCTTCAATTGGATATTAG 59.171 41.667 14.15 0.00 0.00 1.73
2800 3179 4.802307 TGGCAGCCTTCAATTGGATATTA 58.198 39.130 14.15 0.00 0.00 0.98
2801 3180 3.645434 TGGCAGCCTTCAATTGGATATT 58.355 40.909 14.15 0.00 0.00 1.28
2802 3181 3.317455 TGGCAGCCTTCAATTGGATAT 57.683 42.857 14.15 0.00 0.00 1.63
2803 3182 2.760092 GTTGGCAGCCTTCAATTGGATA 59.240 45.455 14.15 0.00 0.00 2.59
2804 3183 1.551883 GTTGGCAGCCTTCAATTGGAT 59.448 47.619 14.15 0.00 0.00 3.41
2805 3184 0.968405 GTTGGCAGCCTTCAATTGGA 59.032 50.000 14.15 0.00 0.00 3.53
2806 3185 0.971386 AGTTGGCAGCCTTCAATTGG 59.029 50.000 14.15 0.00 0.00 3.16
2807 3186 1.614903 TGAGTTGGCAGCCTTCAATTG 59.385 47.619 14.15 0.00 0.00 2.32
2808 3187 1.999648 TGAGTTGGCAGCCTTCAATT 58.000 45.000 14.15 0.00 0.00 2.32
2809 3188 2.226962 ATGAGTTGGCAGCCTTCAAT 57.773 45.000 14.15 0.00 0.00 2.57
2810 3189 1.999648 AATGAGTTGGCAGCCTTCAA 58.000 45.000 14.15 0.00 0.00 2.69
2811 3190 1.888512 GAAATGAGTTGGCAGCCTTCA 59.111 47.619 14.15 13.98 0.00 3.02
2812 3191 1.888512 TGAAATGAGTTGGCAGCCTTC 59.111 47.619 14.15 6.69 0.00 3.46
2813 3192 1.999648 TGAAATGAGTTGGCAGCCTT 58.000 45.000 14.15 0.00 0.00 4.35
2814 3193 2.226962 ATGAAATGAGTTGGCAGCCT 57.773 45.000 14.15 0.00 0.00 4.58
2815 3194 2.733227 CGAATGAAATGAGTTGGCAGCC 60.733 50.000 3.66 3.66 0.00 4.85
2816 3195 2.095059 ACGAATGAAATGAGTTGGCAGC 60.095 45.455 0.00 0.00 0.00 5.25
2817 3196 3.837213 ACGAATGAAATGAGTTGGCAG 57.163 42.857 0.00 0.00 0.00 4.85
2818 3197 5.000591 TCTTACGAATGAAATGAGTTGGCA 58.999 37.500 0.00 0.00 0.00 4.92
2819 3198 5.545658 TCTTACGAATGAAATGAGTTGGC 57.454 39.130 0.00 0.00 0.00 4.52
2843 3222 8.382875 GCTACACCTACGAAAATATTTTTACGT 58.617 33.333 23.05 23.05 35.63 3.57
2844 3223 8.382130 TGCTACACCTACGAAAATATTTTTACG 58.618 33.333 14.45 15.49 0.00 3.18
2847 3226 9.567848 CAATGCTACACCTACGAAAATATTTTT 57.432 29.630 14.45 2.92 0.00 1.94
2848 3227 7.700656 GCAATGCTACACCTACGAAAATATTTT 59.299 33.333 13.24 13.24 0.00 1.82
2849 3228 7.067008 AGCAATGCTACACCTACGAAAATATTT 59.933 33.333 5.69 0.00 36.99 1.40
2850 3229 6.542370 AGCAATGCTACACCTACGAAAATATT 59.458 34.615 5.69 0.00 36.99 1.28
2851 3230 6.055588 AGCAATGCTACACCTACGAAAATAT 58.944 36.000 5.69 0.00 36.99 1.28
2852 3231 5.424757 AGCAATGCTACACCTACGAAAATA 58.575 37.500 5.69 0.00 36.99 1.40
2853 3232 4.261801 AGCAATGCTACACCTACGAAAAT 58.738 39.130 5.69 0.00 36.99 1.82
2854 3233 3.670625 AGCAATGCTACACCTACGAAAA 58.329 40.909 5.69 0.00 36.99 2.29
2855 3234 3.259064 GAGCAATGCTACACCTACGAAA 58.741 45.455 8.12 0.00 39.88 3.46
2856 3235 2.418197 GGAGCAATGCTACACCTACGAA 60.418 50.000 13.46 0.00 39.71 3.85
2857 3236 1.136305 GGAGCAATGCTACACCTACGA 59.864 52.381 13.46 0.00 39.71 3.43
2858 3237 1.137086 AGGAGCAATGCTACACCTACG 59.863 52.381 20.85 0.00 42.99 3.51
2859 3238 2.939103 CAAGGAGCAATGCTACACCTAC 59.061 50.000 20.85 0.00 42.99 3.18
2860 3239 2.680805 GCAAGGAGCAATGCTACACCTA 60.681 50.000 20.85 0.00 42.99 3.08
2861 3240 1.952367 GCAAGGAGCAATGCTACACCT 60.952 52.381 20.85 14.01 42.99 4.00
2862 3241 0.453390 GCAAGGAGCAATGCTACACC 59.547 55.000 20.85 11.77 42.99 4.16
2873 3252 0.875474 GAGATCAGCGAGCAAGGAGC 60.875 60.000 0.00 0.00 46.19 4.70
2876 3255 0.746063 AGAGAGATCAGCGAGCAAGG 59.254 55.000 0.00 0.00 0.00 3.61
2900 3279 9.289303 CGACAGAAAAGAAAAGAAATGAAAAGA 57.711 29.630 0.00 0.00 0.00 2.52
2901 3280 8.052490 GCGACAGAAAAGAAAAGAAATGAAAAG 58.948 33.333 0.00 0.00 0.00 2.27
2902 3281 7.759433 AGCGACAGAAAAGAAAAGAAATGAAAA 59.241 29.630 0.00 0.00 0.00 2.29
2903 3282 7.257722 AGCGACAGAAAAGAAAAGAAATGAAA 58.742 30.769 0.00 0.00 0.00 2.69
2904 3283 6.795399 AGCGACAGAAAAGAAAAGAAATGAA 58.205 32.000 0.00 0.00 0.00 2.57
2905 3284 6.377327 AGCGACAGAAAAGAAAAGAAATGA 57.623 33.333 0.00 0.00 0.00 2.57
2906 3285 5.626955 GGAGCGACAGAAAAGAAAAGAAATG 59.373 40.000 0.00 0.00 0.00 2.32
2907 3286 5.278512 GGGAGCGACAGAAAAGAAAAGAAAT 60.279 40.000 0.00 0.00 0.00 2.17
2908 3287 4.036380 GGGAGCGACAGAAAAGAAAAGAAA 59.964 41.667 0.00 0.00 0.00 2.52
2909 3288 3.564225 GGGAGCGACAGAAAAGAAAAGAA 59.436 43.478 0.00 0.00 0.00 2.52
2963 3342 4.182339 GGTAGAGTTTTTCCCTTAGCGAG 58.818 47.826 0.00 0.00 0.00 5.03
2964 3343 3.579586 TGGTAGAGTTTTTCCCTTAGCGA 59.420 43.478 0.00 0.00 0.00 4.93
2965 3344 3.934068 TGGTAGAGTTTTTCCCTTAGCG 58.066 45.455 0.00 0.00 0.00 4.26
2966 3345 6.835819 AAATGGTAGAGTTTTTCCCTTAGC 57.164 37.500 0.00 0.00 0.00 3.09
2967 3346 8.637196 AGAAAATGGTAGAGTTTTTCCCTTAG 57.363 34.615 0.00 0.00 39.18 2.18
2968 3347 9.511272 GTAGAAAATGGTAGAGTTTTTCCCTTA 57.489 33.333 0.00 0.00 39.18 2.69
2969 3348 7.174426 CGTAGAAAATGGTAGAGTTTTTCCCTT 59.826 37.037 0.00 0.00 39.18 3.95
2970 3349 6.653740 CGTAGAAAATGGTAGAGTTTTTCCCT 59.346 38.462 0.00 0.00 39.18 4.20
3007 3849 8.450964 TCGCAAACAAATTTTAAAAACCATGAA 58.549 25.926 4.44 0.00 0.00 2.57
3171 4035 9.119418 TCATGAACTGTTTTGAAGTCTTTATCA 57.881 29.630 0.00 0.00 0.00 2.15
3172 4036 9.950680 TTCATGAACTGTTTTGAAGTCTTTATC 57.049 29.630 3.38 0.00 0.00 1.75
3175 4039 8.469200 TGATTCATGAACTGTTTTGAAGTCTTT 58.531 29.630 11.07 7.48 32.13 2.52
3176 4040 7.999679 TGATTCATGAACTGTTTTGAAGTCTT 58.000 30.769 11.07 7.73 32.13 3.01
3177 4041 7.572523 TGATTCATGAACTGTTTTGAAGTCT 57.427 32.000 11.07 7.98 32.13 3.24
3178 4042 8.633075 TTTGATTCATGAACTGTTTTGAAGTC 57.367 30.769 11.07 16.00 32.13 3.01
3228 4092 9.590088 CCACGAGTAGTTTTTAAATAAGTGAAC 57.410 33.333 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.