Multiple sequence alignment - TraesCS7A01G031700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G031700 chr7A 100.000 4029 0 0 1 4029 13180329 13176301 0.000000e+00 7441.0
1 TraesCS7A01G031700 chr7A 98.792 662 6 2 1 662 650933878 650933219 0.000000e+00 1177.0
2 TraesCS7A01G031700 chr7A 86.256 422 50 1 1001 1414 465342604 465343025 6.140000e-123 451.0
3 TraesCS7A01G031700 chr7A 86.897 145 16 3 733 875 161297334 161297477 4.170000e-35 159.0
4 TraesCS7A01G031700 chr7A 84.722 144 9 3 3474 3605 13163603 13163461 9.090000e-27 132.0
5 TraesCS7A01G031700 chr7D 86.425 1989 171 39 1996 3942 13676406 13674475 0.000000e+00 2085.0
6 TraesCS7A01G031700 chr7D 89.934 1212 73 18 723 1917 13677634 13676455 0.000000e+00 1517.0
7 TraesCS7A01G031700 chr7D 89.077 531 55 2 1002 1532 34996561 34996034 0.000000e+00 656.0
8 TraesCS7A01G031700 chr7D 85.000 140 19 2 738 875 160489888 160490027 1.510000e-29 141.0
9 TraesCS7A01G031700 chr7D 92.857 42 2 1 707 748 235530995 235530955 4.350000e-05 60.2
10 TraesCS7A01G031700 chr5B 99.095 663 5 1 1 663 539618554 539619215 0.000000e+00 1190.0
11 TraesCS7A01G031700 chr5B 84.023 532 61 6 1001 1532 643476102 643476609 1.300000e-134 490.0
12 TraesCS7A01G031700 chr5B 91.139 79 4 3 3936 4011 261248028 261247950 1.980000e-18 104.0
13 TraesCS7A01G031700 chr6B 89.513 677 67 4 1 674 23526350 23525675 0.000000e+00 854.0
14 TraesCS7A01G031700 chr6B 87.342 237 27 1 1019 1252 703841017 703840781 6.640000e-68 268.0
15 TraesCS7A01G031700 chr6B 86.441 118 13 3 747 861 37956926 37956809 4.230000e-25 126.0
16 TraesCS7A01G031700 chrUn 84.418 584 81 8 84 661 281575119 281575698 2.100000e-157 566.0
17 TraesCS7A01G031700 chr7B 84.321 574 80 7 85 654 73481649 73482216 1.640000e-153 553.0
18 TraesCS7A01G031700 chr7B 87.342 237 27 1 1019 1252 317847263 317847027 6.640000e-68 268.0
19 TraesCS7A01G031700 chr7B 89.873 79 5 3 3936 4011 680190641 680190563 9.220000e-17 99.0
20 TraesCS7A01G031700 chr7B 94.872 39 2 0 710 748 731022012 731021974 1.210000e-05 62.1
21 TraesCS7A01G031700 chr5A 82.886 596 82 16 69 660 16842420 16842999 5.970000e-143 518.0
22 TraesCS7A01G031700 chr5A 88.124 421 42 1 1002 1414 425274744 425274324 1.010000e-135 494.0
23 TraesCS7A01G031700 chr5A 89.873 79 4 3 3940 4014 447370450 447370372 9.220000e-17 99.0
24 TraesCS7A01G031700 chr5A 93.220 59 4 0 1483 1541 29442723 29442781 1.990000e-13 87.9
25 TraesCS7A01G031700 chr4B 91.758 364 22 4 1 357 627527404 627527766 2.160000e-137 499.0
26 TraesCS7A01G031700 chr4B 93.103 87 6 0 355 441 627529676 627529762 1.180000e-25 128.0
27 TraesCS7A01G031700 chr4B 94.643 56 3 0 1486 1541 20611927 20611872 1.990000e-13 87.9
28 TraesCS7A01G031700 chr2A 86.709 316 37 4 84 397 112492100 112492412 2.980000e-91 346.0
29 TraesCS7A01G031700 chr2A 88.571 140 13 3 733 870 759849278 759849140 2.490000e-37 167.0
30 TraesCS7A01G031700 chr2A 85.906 149 21 0 2374 2522 775687173 775687025 4.170000e-35 159.0
31 TraesCS7A01G031700 chr6D 89.451 237 22 1 1019 1252 324511266 324511030 3.040000e-76 296.0
32 TraesCS7A01G031700 chr6D 92.000 75 2 3 3941 4011 219783643 219783717 7.120000e-18 102.0
33 TraesCS7A01G031700 chr6D 94.643 56 3 0 1486 1541 324510990 324510935 1.990000e-13 87.9
34 TraesCS7A01G031700 chr3D 87.342 237 27 1 1019 1252 178168133 178167897 6.640000e-68 268.0
35 TraesCS7A01G031700 chr3D 89.873 79 5 3 3936 4011 540361744 540361666 9.220000e-17 99.0
36 TraesCS7A01G031700 chr3D 94.643 56 3 0 1486 1541 178167857 178167802 1.990000e-13 87.9
37 TraesCS7A01G031700 chr1B 81.667 180 32 1 481 660 641687554 641687376 9.020000e-32 148.0
38 TraesCS7A01G031700 chr1B 89.873 79 4 4 3935 4011 611409449 611409525 9.220000e-17 99.0
39 TraesCS7A01G031700 chr1B 100.000 34 0 0 712 745 196144406 196144439 3.360000e-06 63.9
40 TraesCS7A01G031700 chr1B 92.683 41 3 0 708 748 343665350 343665310 4.350000e-05 60.2
41 TraesCS7A01G031700 chr3B 86.029 136 16 3 733 866 63434755 63434621 4.200000e-30 143.0
42 TraesCS7A01G031700 chr3B 94.737 38 2 0 708 745 776230137 776230174 4.350000e-05 60.2
43 TraesCS7A01G031700 chr3A 85.612 139 17 3 733 870 25193629 25193765 4.200000e-30 143.0
44 TraesCS7A01G031700 chr2D 84.091 132 17 4 740 871 27499706 27499579 1.520000e-24 124.0
45 TraesCS7A01G031700 chr2D 83.721 129 20 1 744 871 16143600 16143728 1.970000e-23 121.0
46 TraesCS7A01G031700 chr2D 87.234 94 8 4 3921 4011 642198698 642198790 1.980000e-18 104.0
47 TraesCS7A01G031700 chr5D 90.909 77 4 3 3935 4009 332506253 332506328 2.560000e-17 100.0
48 TraesCS7A01G031700 chr5D 91.781 73 4 2 3941 4011 340531559 340531631 2.560000e-17 100.0
49 TraesCS7A01G031700 chr5D 91.525 59 5 0 1483 1541 526748837 526748895 9.280000e-12 82.4
50 TraesCS7A01G031700 chr6A 92.857 56 4 0 1486 1541 115939617 115939562 9.280000e-12 82.4
51 TraesCS7A01G031700 chr6A 97.143 35 0 1 712 745 456781879 456781913 1.560000e-04 58.4
52 TraesCS7A01G031700 chr4A 92.857 56 4 0 1486 1541 32125457 32125402 9.280000e-12 82.4
53 TraesCS7A01G031700 chr4A 97.222 36 1 0 712 747 491662844 491662879 1.210000e-05 62.1
54 TraesCS7A01G031700 chr4A 94.737 38 2 0 708 745 143238944 143238907 4.350000e-05 60.2
55 TraesCS7A01G031700 chr4D 100.000 34 0 0 712 745 118243641 118243608 3.360000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G031700 chr7A 13176301 13180329 4028 True 7441.0 7441 100.0000 1 4029 1 chr7A.!!$R2 4028
1 TraesCS7A01G031700 chr7A 650933219 650933878 659 True 1177.0 1177 98.7920 1 662 1 chr7A.!!$R3 661
2 TraesCS7A01G031700 chr7D 13674475 13677634 3159 True 1801.0 2085 88.1795 723 3942 2 chr7D.!!$R3 3219
3 TraesCS7A01G031700 chr7D 34996034 34996561 527 True 656.0 656 89.0770 1002 1532 1 chr7D.!!$R1 530
4 TraesCS7A01G031700 chr5B 539618554 539619215 661 False 1190.0 1190 99.0950 1 663 1 chr5B.!!$F1 662
5 TraesCS7A01G031700 chr5B 643476102 643476609 507 False 490.0 490 84.0230 1001 1532 1 chr5B.!!$F2 531
6 TraesCS7A01G031700 chr6B 23525675 23526350 675 True 854.0 854 89.5130 1 674 1 chr6B.!!$R1 673
7 TraesCS7A01G031700 chrUn 281575119 281575698 579 False 566.0 566 84.4180 84 661 1 chrUn.!!$F1 577
8 TraesCS7A01G031700 chr7B 73481649 73482216 567 False 553.0 553 84.3210 85 654 1 chr7B.!!$F1 569
9 TraesCS7A01G031700 chr5A 16842420 16842999 579 False 518.0 518 82.8860 69 660 1 chr5A.!!$F1 591
10 TraesCS7A01G031700 chr4B 627527404 627529762 2358 False 313.5 499 92.4305 1 441 2 chr4B.!!$F1 440

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
973 2904 0.109919 GTCCTTTTTAGTTGCCGCCG 60.110 55.0 0.0 0.0 0.00 6.46 F
975 2906 0.168128 CCTTTTTAGTTGCCGCCGAG 59.832 55.0 0.0 0.0 0.00 4.63 F
976 2907 0.168128 CTTTTTAGTTGCCGCCGAGG 59.832 55.0 0.0 0.0 44.97 4.63 F
1698 3646 0.177836 ACCATGATGCCGACGATGAA 59.822 50.0 0.0 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2611 4569 0.103208 GAGAGGTACGCCACATCCAG 59.897 60.0 0.0 0.0 38.77 3.86 R
2613 4571 0.103208 CTGAGAGGTACGCCACATCC 59.897 60.0 0.0 0.0 38.77 3.51 R
2841 4800 0.469518 ACCGGCCTCCAGTATCCTAC 60.470 60.0 0.0 0.0 0.00 3.18 R
3660 5639 0.032815 TCGTCCATCGTGCTTTGTGA 59.967 50.0 0.0 0.0 40.80 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
587 2511 0.591236 CAACTTGTTGCACCGGTTCG 60.591 55.000 2.97 0.00 0.00 3.95
628 2552 7.575414 TTTAGCACTAAAATGACTTTCCACA 57.425 32.000 0.37 0.00 32.64 4.17
663 2587 5.670792 ACCGATGGTGTAATTGACTCTAA 57.329 39.130 0.00 0.00 32.98 2.10
666 2590 6.938030 ACCGATGGTGTAATTGACTCTAAAAA 59.062 34.615 0.00 0.00 32.98 1.94
705 2629 7.972623 GTGAGTGACACTTGTCTATATACAC 57.027 40.000 10.01 5.37 44.99 2.90
706 2630 7.535997 GTGAGTGACACTTGTCTATATACACA 58.464 38.462 10.01 2.66 44.99 3.72
707 2631 8.191446 GTGAGTGACACTTGTCTATATACACAT 58.809 37.037 10.01 0.00 44.99 3.21
708 2632 9.403583 TGAGTGACACTTGTCTATATACACATA 57.596 33.333 10.01 0.00 44.99 2.29
743 2667 5.712004 TGTTTGGATTGCTTATCACATGTG 58.288 37.500 20.18 20.18 34.77 3.21
788 2713 8.866970 ATATGAAAATTTTGAAGGCCAAATGT 57.133 26.923 8.47 0.00 43.59 2.71
789 2714 7.585579 ATGAAAATTTTGAAGGCCAAATGTT 57.414 28.000 8.47 3.20 43.59 2.71
790 2715 7.025485 TGAAAATTTTGAAGGCCAAATGTTC 57.975 32.000 16.85 16.85 43.59 3.18
791 2716 6.827762 TGAAAATTTTGAAGGCCAAATGTTCT 59.172 30.769 21.21 0.00 43.59 3.01
792 2717 6.866010 AAATTTTGAAGGCCAAATGTTCTC 57.134 33.333 5.01 0.00 43.59 2.87
793 2718 5.813513 ATTTTGAAGGCCAAATGTTCTCT 57.186 34.783 5.01 0.00 43.59 3.10
819 2744 8.541133 TGTTTGGAAGAAACGAAAAAGAAAAT 57.459 26.923 0.00 0.00 33.05 1.82
849 2774 3.085443 AGGATAGCACGAATCTTGACG 57.915 47.619 0.00 0.00 0.00 4.35
863 2788 2.290367 TCTTGACGCAAACTGAATGGTG 59.710 45.455 0.00 0.00 0.00 4.17
874 2799 6.816640 GCAAACTGAATGGTGTAGATAGTGTA 59.183 38.462 0.00 0.00 0.00 2.90
883 2808 4.154556 GGTGTAGATAGTGTAGAGGCGATC 59.845 50.000 0.00 0.00 0.00 3.69
887 2812 1.319541 TAGTGTAGAGGCGATCCTGC 58.680 55.000 0.00 0.00 44.46 4.85
913 2838 2.644555 CTTGGCCCCGACGTATGGAG 62.645 65.000 0.00 0.00 0.00 3.86
914 2839 4.603946 GGCCCCGACGTATGGAGC 62.604 72.222 7.86 6.10 0.00 4.70
915 2840 3.537874 GCCCCGACGTATGGAGCT 61.538 66.667 7.86 0.00 0.00 4.09
916 2841 2.417516 CCCCGACGTATGGAGCTG 59.582 66.667 7.86 0.00 0.00 4.24
917 2842 2.279517 CCCGACGTATGGAGCTGC 60.280 66.667 7.86 0.00 0.00 5.25
918 2843 2.279517 CCGACGTATGGAGCTGCC 60.280 66.667 1.53 0.00 37.10 4.85
933 2858 4.357279 GCCAGCTGCCTTGGTCCT 62.357 66.667 8.66 0.00 38.02 3.85
945 2870 2.484770 CCTTGGTCCTGACGTTTCAAGA 60.485 50.000 12.62 0.00 35.08 3.02
950 2875 3.875134 GGTCCTGACGTTTCAAGAGAAAA 59.125 43.478 0.00 0.00 44.75 2.29
951 2876 4.024809 GGTCCTGACGTTTCAAGAGAAAAG 60.025 45.833 0.00 0.00 44.75 2.27
973 2904 0.109919 GTCCTTTTTAGTTGCCGCCG 60.110 55.000 0.00 0.00 0.00 6.46
974 2905 0.250381 TCCTTTTTAGTTGCCGCCGA 60.250 50.000 0.00 0.00 0.00 5.54
975 2906 0.168128 CCTTTTTAGTTGCCGCCGAG 59.832 55.000 0.00 0.00 0.00 4.63
976 2907 0.168128 CTTTTTAGTTGCCGCCGAGG 59.832 55.000 0.00 0.00 44.97 4.63
977 2908 0.250381 TTTTTAGTTGCCGCCGAGGA 60.250 50.000 0.91 0.00 45.00 3.71
978 2909 0.672401 TTTTAGTTGCCGCCGAGGAG 60.672 55.000 0.91 0.00 45.00 3.69
979 2910 2.515996 TTTAGTTGCCGCCGAGGAGG 62.516 60.000 7.59 7.59 45.00 4.30
982 2913 3.632080 TTGCCGCCGAGGAGGAAA 61.632 61.111 16.22 8.76 45.00 3.13
996 2935 5.567623 CGAGGAGGAAAAGAGTCAGAATTCA 60.568 44.000 8.44 0.00 0.00 2.57
1439 3378 1.000496 GGGTAGGATTAAGCTCGACCG 60.000 57.143 0.00 0.00 0.00 4.79
1458 3397 2.359967 CCTCCGGGACTTCCTCCAC 61.360 68.421 0.00 0.00 41.63 4.02
1461 3400 2.359967 CCGGGACTTCCTCCACCTC 61.360 68.421 0.00 0.00 41.63 3.85
1530 3469 2.657296 ACGTTCGCCACACACTCG 60.657 61.111 0.00 0.00 0.00 4.18
1548 3487 1.614241 CGTTCTTCCGGGAGATGGGT 61.614 60.000 14.89 0.00 0.00 4.51
1552 3491 0.462047 CTTCCGGGAGATGGGTTTCG 60.462 60.000 2.45 0.00 0.00 3.46
1620 3559 0.602638 GCGACATGTTCCAGGTGACA 60.603 55.000 0.00 1.64 0.00 3.58
1660 3599 3.846405 AAGGCGGACAGGGACCTCA 62.846 63.158 0.00 0.00 0.00 3.86
1671 3610 1.682257 GGACCTCAGGCTGAAGCTT 59.318 57.895 19.29 0.00 41.70 3.74
1679 3627 1.002868 GGCTGAAGCTTGCTCCTCA 60.003 57.895 2.10 0.00 41.70 3.86
1683 3631 0.694771 TGAAGCTTGCTCCTCACCAT 59.305 50.000 2.10 0.00 0.00 3.55
1686 3634 0.917533 AGCTTGCTCCTCACCATGAT 59.082 50.000 0.00 0.00 0.00 2.45
1688 3636 1.022735 CTTGCTCCTCACCATGATGC 58.977 55.000 0.00 0.00 0.00 3.91
1689 3637 0.394762 TTGCTCCTCACCATGATGCC 60.395 55.000 0.00 0.00 0.00 4.40
1692 3640 0.531532 CTCCTCACCATGATGCCGAC 60.532 60.000 0.00 0.00 0.00 4.79
1697 3645 0.530431 CACCATGATGCCGACGATGA 60.530 55.000 0.00 0.00 0.00 2.92
1698 3646 0.177836 ACCATGATGCCGACGATGAA 59.822 50.000 0.00 0.00 0.00 2.57
1699 3647 0.863799 CCATGATGCCGACGATGAAG 59.136 55.000 0.00 0.00 0.00 3.02
1700 3648 1.538849 CCATGATGCCGACGATGAAGA 60.539 52.381 0.00 0.00 0.00 2.87
1701 3649 2.204237 CATGATGCCGACGATGAAGAA 58.796 47.619 0.00 0.00 0.00 2.52
1702 3650 1.926561 TGATGCCGACGATGAAGAAG 58.073 50.000 0.00 0.00 0.00 2.85
1703 3651 1.476488 TGATGCCGACGATGAAGAAGA 59.524 47.619 0.00 0.00 0.00 2.87
1704 3652 2.094234 TGATGCCGACGATGAAGAAGAA 60.094 45.455 0.00 0.00 0.00 2.52
1705 3653 1.996292 TGCCGACGATGAAGAAGAAG 58.004 50.000 0.00 0.00 0.00 2.85
1706 3654 1.544246 TGCCGACGATGAAGAAGAAGA 59.456 47.619 0.00 0.00 0.00 2.87
1707 3655 2.029380 TGCCGACGATGAAGAAGAAGAA 60.029 45.455 0.00 0.00 0.00 2.52
1708 3656 2.600867 GCCGACGATGAAGAAGAAGAAG 59.399 50.000 0.00 0.00 0.00 2.85
1879 3827 1.227089 CTCGCCGAGTTCTGGATGG 60.227 63.158 5.82 0.00 0.00 3.51
1903 3851 3.315521 CGGAGATCGCGTTCGCAG 61.316 66.667 20.03 13.61 35.26 5.18
1930 3878 6.294342 CCTGCAGGTAATATTGATCCACAATG 60.294 42.308 25.53 0.00 46.93 2.82
1931 3879 6.128486 TGCAGGTAATATTGATCCACAATGT 58.872 36.000 0.00 0.00 46.93 2.71
1932 3880 6.606796 TGCAGGTAATATTGATCCACAATGTT 59.393 34.615 0.00 0.00 46.93 2.71
1933 3881 7.141363 GCAGGTAATATTGATCCACAATGTTC 58.859 38.462 0.00 0.00 46.93 3.18
1936 3884 8.497745 AGGTAATATTGATCCACAATGTTCTCT 58.502 33.333 0.00 0.00 46.93 3.10
1937 3885 9.778741 GGTAATATTGATCCACAATGTTCTCTA 57.221 33.333 0.00 0.00 46.93 2.43
1942 3890 8.899427 ATTGATCCACAATGTTCTCTACATAG 57.101 34.615 0.00 0.00 46.75 2.23
1943 3891 7.423844 TGATCCACAATGTTCTCTACATAGT 57.576 36.000 0.00 0.00 46.75 2.12
1944 3892 8.533569 TGATCCACAATGTTCTCTACATAGTA 57.466 34.615 0.00 0.00 46.75 1.82
1945 3893 9.147732 TGATCCACAATGTTCTCTACATAGTAT 57.852 33.333 0.00 0.00 46.75 2.12
1948 3896 9.416284 TCCACAATGTTCTCTACATAGTATACA 57.584 33.333 5.50 0.00 46.75 2.29
1966 3914 8.470040 AGTATACATTGTACTTGTGTAAACCG 57.530 34.615 5.50 0.00 32.65 4.44
1967 3915 8.090214 AGTATACATTGTACTTGTGTAAACCGT 58.910 33.333 5.50 0.00 32.65 4.83
1968 3916 5.412526 ACATTGTACTTGTGTAAACCGTG 57.587 39.130 0.00 0.00 0.00 4.94
1969 3917 4.877251 ACATTGTACTTGTGTAAACCGTGT 59.123 37.500 0.00 0.00 0.00 4.49
1970 3918 5.354792 ACATTGTACTTGTGTAAACCGTGTT 59.645 36.000 0.00 0.00 0.00 3.32
1971 3919 5.876612 TTGTACTTGTGTAAACCGTGTTT 57.123 34.783 7.11 7.11 0.00 2.83
1972 3920 6.974932 TTGTACTTGTGTAAACCGTGTTTA 57.025 33.333 5.46 5.46 0.00 2.01
1973 3921 7.551035 TTGTACTTGTGTAAACCGTGTTTAT 57.449 32.000 10.92 0.42 0.00 1.40
1974 3922 7.551035 TGTACTTGTGTAAACCGTGTTTATT 57.449 32.000 10.92 0.00 0.00 1.40
1975 3923 7.983307 TGTACTTGTGTAAACCGTGTTTATTT 58.017 30.769 10.92 0.00 0.00 1.40
1976 3924 8.121708 TGTACTTGTGTAAACCGTGTTTATTTC 58.878 33.333 10.92 6.89 0.00 2.17
1977 3925 7.324354 ACTTGTGTAAACCGTGTTTATTTCT 57.676 32.000 10.92 0.00 0.00 2.52
1978 3926 7.190871 ACTTGTGTAAACCGTGTTTATTTCTG 58.809 34.615 10.92 6.47 0.00 3.02
1979 3927 5.512473 TGTGTAAACCGTGTTTATTTCTGC 58.488 37.500 10.92 1.36 0.00 4.26
1980 3928 4.609708 GTGTAAACCGTGTTTATTTCTGCG 59.390 41.667 10.92 0.00 0.00 5.18
1981 3929 4.510711 TGTAAACCGTGTTTATTTCTGCGA 59.489 37.500 10.92 0.00 0.00 5.10
1982 3930 4.759516 AAACCGTGTTTATTTCTGCGAT 57.240 36.364 0.86 0.00 0.00 4.58
1983 3931 3.740044 ACCGTGTTTATTTCTGCGATG 57.260 42.857 0.00 0.00 0.00 3.84
1984 3932 2.159572 ACCGTGTTTATTTCTGCGATGC 60.160 45.455 0.00 0.00 0.00 3.91
1985 3933 2.440501 CGTGTTTATTTCTGCGATGCC 58.559 47.619 0.00 0.00 0.00 4.40
1986 3934 2.095853 CGTGTTTATTTCTGCGATGCCT 59.904 45.455 0.00 0.00 0.00 4.75
1987 3935 3.308595 CGTGTTTATTTCTGCGATGCCTA 59.691 43.478 0.00 0.00 0.00 3.93
1988 3936 4.588278 GTGTTTATTTCTGCGATGCCTAC 58.412 43.478 0.00 0.00 0.00 3.18
1989 3937 4.332819 GTGTTTATTTCTGCGATGCCTACT 59.667 41.667 0.00 0.00 0.00 2.57
1990 3938 4.332543 TGTTTATTTCTGCGATGCCTACTG 59.667 41.667 0.00 0.00 0.00 2.74
1991 3939 2.988010 ATTTCTGCGATGCCTACTGA 57.012 45.000 0.00 0.00 0.00 3.41
1992 3940 2.988010 TTTCTGCGATGCCTACTGAT 57.012 45.000 0.00 0.00 0.00 2.90
1993 3941 4.607293 ATTTCTGCGATGCCTACTGATA 57.393 40.909 0.00 0.00 0.00 2.15
1994 3942 4.607293 TTTCTGCGATGCCTACTGATAT 57.393 40.909 0.00 0.00 0.00 1.63
1995 3943 3.857549 TCTGCGATGCCTACTGATATC 57.142 47.619 0.00 0.00 0.00 1.63
1996 3944 2.493675 TCTGCGATGCCTACTGATATCC 59.506 50.000 0.00 0.00 0.00 2.59
1997 3945 2.232208 CTGCGATGCCTACTGATATCCA 59.768 50.000 0.00 0.00 0.00 3.41
1998 3946 2.833943 TGCGATGCCTACTGATATCCAT 59.166 45.455 0.00 0.00 0.00 3.41
2007 3955 5.744300 GCCTACTGATATCCATGCTGAACTT 60.744 44.000 0.00 0.00 0.00 2.66
2014 3962 2.929641 TCCATGCTGAACTTTGTCACA 58.070 42.857 0.00 0.00 0.00 3.58
2047 3995 5.811613 GGATATCATGAACTATGCAGAGAGC 59.188 44.000 16.75 6.80 45.96 4.09
2134 4082 1.271054 ACCCATGATAAGGCTGCGATC 60.271 52.381 0.00 0.00 0.00 3.69
2143 4091 2.328289 GCTGCGATCGAGCGTCTA 59.672 61.111 25.15 10.51 40.67 2.59
2149 4097 1.420378 CGATCGAGCGTCTAGAGCTA 58.580 55.000 16.15 3.79 46.13 3.32
2155 4103 2.597971 CGAGCGTCTAGAGCTAGTTTCG 60.598 54.545 14.25 10.64 46.13 3.46
2179 4127 1.773496 GCCTTTCGAACGTGTCTCG 59.227 57.895 0.00 1.73 46.00 4.04
2197 4145 3.416119 TCGTATACGAAGGCTGTTGAG 57.584 47.619 24.97 0.00 46.30 3.02
2200 4148 4.818005 TCGTATACGAAGGCTGTTGAGATA 59.182 41.667 24.97 0.00 46.30 1.98
2205 4153 3.449018 ACGAAGGCTGTTGAGATACTGAT 59.551 43.478 0.00 0.00 0.00 2.90
2236 4184 2.038557 TGGTAGCAAGAAGTTCCAGACC 59.961 50.000 0.00 1.61 0.00 3.85
2239 4187 3.297134 AGCAAGAAGTTCCAGACCAAA 57.703 42.857 0.00 0.00 0.00 3.28
2266 4214 1.202604 TGGGGAATCGATTTAGCGTCC 60.203 52.381 12.81 7.56 0.00 4.79
2282 4230 2.152016 CGTCCGAGCATGAGAGGTATA 58.848 52.381 0.00 0.00 0.00 1.47
2287 4235 6.073494 CGTCCGAGCATGAGAGGTATATATAG 60.073 46.154 0.00 0.00 0.00 1.31
2316 4264 5.932619 ACACCTGTGCAGATACAGTTATA 57.067 39.130 0.02 0.00 45.12 0.98
2317 4265 6.294361 ACACCTGTGCAGATACAGTTATAA 57.706 37.500 0.02 0.00 45.12 0.98
2321 4269 5.994054 CCTGTGCAGATACAGTTATAAGCAT 59.006 40.000 0.02 0.00 45.12 3.79
2341 4289 8.652810 AAGCATTGATATTTCTGTTATTTGCC 57.347 30.769 0.00 0.00 0.00 4.52
2342 4290 6.919662 AGCATTGATATTTCTGTTATTTGCCG 59.080 34.615 0.00 0.00 0.00 5.69
2343 4291 6.697019 GCATTGATATTTCTGTTATTTGCCGT 59.303 34.615 0.00 0.00 0.00 5.68
2356 4313 0.608640 TTGCCGTGTTGTTTGGGTTT 59.391 45.000 0.00 0.00 0.00 3.27
2361 4318 2.413453 CCGTGTTGTTTGGGTTTTTGTG 59.587 45.455 0.00 0.00 0.00 3.33
2369 4326 4.223923 TGTTTGGGTTTTTGTGGTGATTCT 59.776 37.500 0.00 0.00 0.00 2.40
2411 4369 6.472686 AGGTACTTGACTGAGGTGATATTC 57.527 41.667 0.00 0.00 27.25 1.75
2414 4372 6.758886 GGTACTTGACTGAGGTGATATTCAAG 59.241 42.308 7.44 7.44 43.61 3.02
2426 4384 5.591877 GGTGATATTCAAGAAGCCTGTCATT 59.408 40.000 0.00 0.00 0.00 2.57
2489 4447 2.353208 GCTCAACGATGACCAGAAGACT 60.353 50.000 0.00 0.00 0.00 3.24
2498 4456 1.374190 CCAGAAGACTGTGGCTGCT 59.626 57.895 0.00 0.00 42.05 4.24
2510 4468 2.025981 TGTGGCTGCTATGGATGTTCTT 60.026 45.455 0.00 0.00 0.00 2.52
2522 4480 2.558359 GGATGTTCTTGTTCCCAAGGTG 59.442 50.000 2.88 0.00 46.65 4.00
2533 4491 2.771688 TCCCAAGGTGTATAAGGGAGG 58.228 52.381 0.00 0.00 43.39 4.30
2534 4492 2.319747 TCCCAAGGTGTATAAGGGAGGA 59.680 50.000 0.00 0.00 43.39 3.71
2535 4493 2.706190 CCCAAGGTGTATAAGGGAGGAG 59.294 54.545 0.00 0.00 42.25 3.69
2536 4494 2.104963 CCAAGGTGTATAAGGGAGGAGC 59.895 54.545 0.00 0.00 0.00 4.70
2549 4507 5.134725 AGGGAGGAGCAATATGTTGAATT 57.865 39.130 6.35 0.00 37.53 2.17
2622 4580 2.315925 AACTGATACTGGATGTGGCG 57.684 50.000 0.00 0.00 0.00 5.69
2624 4582 2.384828 ACTGATACTGGATGTGGCGTA 58.615 47.619 0.00 0.00 0.00 4.42
2625 4583 2.100916 ACTGATACTGGATGTGGCGTAC 59.899 50.000 0.00 0.00 0.00 3.67
2653 4611 2.632512 GGTTGGTGAATTGATTGGTGGT 59.367 45.455 0.00 0.00 0.00 4.16
2676 4634 4.214327 GAGGGAGGAGCGCTTCGG 62.214 72.222 13.26 0.00 40.28 4.30
2698 4656 5.430886 GGTATCCTTAAACAACGGTACCAT 58.569 41.667 13.54 0.00 32.58 3.55
2700 4658 4.620589 TCCTTAAACAACGGTACCATCA 57.379 40.909 13.54 0.00 0.00 3.07
2705 4663 2.467566 ACAACGGTACCATCACCTTC 57.532 50.000 13.54 0.00 36.35 3.46
2707 4665 2.370849 ACAACGGTACCATCACCTTCTT 59.629 45.455 13.54 0.00 36.35 2.52
2708 4666 3.579586 ACAACGGTACCATCACCTTCTTA 59.420 43.478 13.54 0.00 36.35 2.10
2711 4669 6.070653 ACAACGGTACCATCACCTTCTTATAA 60.071 38.462 13.54 0.00 36.35 0.98
2712 4670 6.742559 ACGGTACCATCACCTTCTTATAAT 57.257 37.500 13.54 0.00 36.35 1.28
2714 4672 6.990349 ACGGTACCATCACCTTCTTATAATTG 59.010 38.462 13.54 0.00 36.35 2.32
2716 4674 7.497909 CGGTACCATCACCTTCTTATAATTGTT 59.502 37.037 13.54 0.00 36.35 2.83
2717 4675 9.185680 GGTACCATCACCTTCTTATAATTGTTT 57.814 33.333 7.15 0.00 35.55 2.83
2792 4750 8.795513 CAACCAATCCATGTCTGCATATAATAA 58.204 33.333 0.00 0.00 33.30 1.40
2854 4813 7.417911 ACATGTTGTGTATGTAGGATACTGGAG 60.418 40.741 0.00 0.00 44.33 3.86
2965 4924 1.372087 GGATGCTCCTCTTTGCCACG 61.372 60.000 0.00 0.00 32.53 4.94
3001 4960 0.767998 GAGATGTCATCCCCTTCCCC 59.232 60.000 9.29 0.00 0.00 4.81
3004 4963 0.995675 ATGTCATCCCCTTCCCCAGG 60.996 60.000 0.00 0.00 43.49 4.45
3045 5004 2.437281 TCTGAAGATCTGATTGGCCTCC 59.563 50.000 3.32 0.00 0.00 4.30
3046 5005 1.492176 TGAAGATCTGATTGGCCTCCC 59.508 52.381 3.32 0.00 0.00 4.30
3081 5040 6.313905 CACAAGTTGTCCATAGTCTGATAACC 59.686 42.308 5.27 0.00 34.33 2.85
3092 5051 4.216708 AGTCTGATAACCAGCTAGGGTAC 58.783 47.826 2.54 0.00 44.01 3.34
3100 5059 2.225445 ACCAGCTAGGGTACAGTGGTAA 60.225 50.000 0.00 0.00 43.89 2.85
3128 5087 9.734984 AGGTGTAAAGCATAGTAAGTGTAAATT 57.265 29.630 0.00 0.00 0.00 1.82
3161 5120 5.194432 TGTCCATAAGTGAGACTAGGAGTC 58.806 45.833 0.00 0.00 45.38 3.36
3178 5137 3.791887 GGAGTCATACGTGCGCATATATC 59.208 47.826 15.91 7.34 0.00 1.63
3179 5138 4.412207 GAGTCATACGTGCGCATATATCA 58.588 43.478 15.91 0.00 0.00 2.15
3181 5140 6.131544 AGTCATACGTGCGCATATATCATA 57.868 37.500 15.91 0.00 0.00 2.15
3183 5142 5.971792 GTCATACGTGCGCATATATCATAGT 59.028 40.000 15.91 5.60 0.00 2.12
3184 5143 6.472486 GTCATACGTGCGCATATATCATAGTT 59.528 38.462 15.91 0.00 0.00 2.24
3185 5144 7.009265 GTCATACGTGCGCATATATCATAGTTT 59.991 37.037 15.91 0.00 0.00 2.66
3186 5145 5.515548 ACGTGCGCATATATCATAGTTTG 57.484 39.130 15.91 0.00 0.00 2.93
3187 5146 4.988540 ACGTGCGCATATATCATAGTTTGT 59.011 37.500 15.91 0.00 0.00 2.83
3188 5147 5.107491 ACGTGCGCATATATCATAGTTTGTG 60.107 40.000 15.91 0.00 0.00 3.33
3189 5148 5.118510 CGTGCGCATATATCATAGTTTGTGA 59.881 40.000 15.91 0.00 0.00 3.58
3193 5152 7.550196 TGCGCATATATCATAGTTTGTGATGAT 59.450 33.333 5.66 3.14 43.55 2.45
3202 5161 8.722480 TCATAGTTTGTGATGATGTCCTTTAG 57.278 34.615 0.00 0.00 0.00 1.85
3209 5168 6.283694 TGTGATGATGTCCTTTAGATAGCAC 58.716 40.000 0.00 0.00 34.63 4.40
3214 5175 7.994425 TGATGTCCTTTAGATAGCACAAAAA 57.006 32.000 0.00 0.00 25.71 1.94
3328 5293 2.105930 GCTGCTAGCTCGTCCCTG 59.894 66.667 17.23 0.00 38.45 4.45
3332 5297 2.716017 GCTAGCTCGTCCCTGCAGT 61.716 63.158 13.81 0.00 0.00 4.40
3333 5298 1.384989 GCTAGCTCGTCCCTGCAGTA 61.385 60.000 13.81 0.00 0.00 2.74
3334 5299 0.665835 CTAGCTCGTCCCTGCAGTAG 59.334 60.000 13.81 3.60 0.00 2.57
3365 5332 6.441093 TCATATCAGTTGTTCAATTCAGGC 57.559 37.500 0.00 0.00 0.00 4.85
3367 5334 2.571212 TCAGTTGTTCAATTCAGGCGT 58.429 42.857 0.00 0.00 0.00 5.68
3402 5369 7.731054 ACTAGAGTTGTCAACTGAATTTCTCT 58.269 34.615 22.83 12.81 43.03 3.10
3424 5391 6.789268 TCTATATAGCTTCTCTCTTCCAGCT 58.211 40.000 4.75 0.00 44.83 4.24
3444 5411 7.117812 TCCAGCTTAATTTTGTAGAGAAAGACG 59.882 37.037 0.00 0.00 0.00 4.18
3451 5418 8.836959 AATTTTGTAGAGAAAGACGTTCAAAC 57.163 30.769 3.93 0.00 38.86 2.93
3472 5439 3.181440 ACTTGTTTCTCTTGATCTGCCCA 60.181 43.478 0.00 0.00 0.00 5.36
3484 5451 6.772716 TCTTGATCTGCCCAAGGTATTTTATC 59.227 38.462 0.00 0.00 40.88 1.75
3485 5452 6.012337 TGATCTGCCCAAGGTATTTTATCA 57.988 37.500 0.00 0.00 0.00 2.15
3581 5559 7.724305 ACACGTAGAATTTCTAACACAACAT 57.276 32.000 7.70 0.00 29.58 2.71
3582 5560 8.149973 ACACGTAGAATTTCTAACACAACATT 57.850 30.769 7.70 0.00 29.58 2.71
3604 5583 0.827507 GGCCTTGTCACCAACCATGT 60.828 55.000 0.00 0.00 0.00 3.21
3612 5591 1.626321 TCACCAACCATGTATCCACGT 59.374 47.619 0.00 0.00 0.00 4.49
3613 5592 2.832733 TCACCAACCATGTATCCACGTA 59.167 45.455 0.00 0.00 0.00 3.57
3652 5631 7.867403 TGAATCTTTGTATTTCCAACTTGAAGC 59.133 33.333 0.00 0.00 0.00 3.86
3653 5632 6.084326 TCTTTGTATTTCCAACTTGAAGCC 57.916 37.500 0.00 0.00 0.00 4.35
3654 5633 5.833131 TCTTTGTATTTCCAACTTGAAGCCT 59.167 36.000 0.00 0.00 0.00 4.58
3655 5634 7.001674 TCTTTGTATTTCCAACTTGAAGCCTA 58.998 34.615 0.00 0.00 0.00 3.93
3657 5636 5.626142 TGTATTTCCAACTTGAAGCCTACA 58.374 37.500 0.00 0.00 0.00 2.74
3658 5637 5.472137 TGTATTTCCAACTTGAAGCCTACAC 59.528 40.000 0.00 0.00 0.00 2.90
3659 5638 2.163818 TCCAACTTGAAGCCTACACG 57.836 50.000 0.00 0.00 0.00 4.49
3660 5639 1.414919 TCCAACTTGAAGCCTACACGT 59.585 47.619 0.00 0.00 0.00 4.49
3661 5640 1.798813 CCAACTTGAAGCCTACACGTC 59.201 52.381 0.00 0.00 0.00 4.34
3662 5641 2.479837 CAACTTGAAGCCTACACGTCA 58.520 47.619 0.00 0.00 0.00 4.35
3663 5642 2.150397 ACTTGAAGCCTACACGTCAC 57.850 50.000 0.00 0.00 0.00 3.67
3664 5643 1.411246 ACTTGAAGCCTACACGTCACA 59.589 47.619 0.00 0.00 0.00 3.58
3666 5645 2.605837 TGAAGCCTACACGTCACAAA 57.394 45.000 0.00 0.00 0.00 2.83
3681 5663 1.464608 CACAAAGCACGATGGACGATT 59.535 47.619 0.00 0.00 45.77 3.34
3710 5692 1.000771 AGTGAGCTCGTGAGGCCTA 60.001 57.895 4.42 0.00 0.00 3.93
3722 5704 2.237392 GTGAGGCCTAAGGATGAGTTGT 59.763 50.000 4.42 0.00 0.00 3.32
3723 5705 2.237143 TGAGGCCTAAGGATGAGTTGTG 59.763 50.000 4.42 0.00 0.00 3.33
3727 5709 3.307762 GGCCTAAGGATGAGTTGTGTTCT 60.308 47.826 0.00 0.00 0.00 3.01
3731 5713 5.641209 CCTAAGGATGAGTTGTGTTCTGAAG 59.359 44.000 0.00 0.00 0.00 3.02
3757 5739 0.618458 AAGGATCACAGCGCCCTTAA 59.382 50.000 11.10 0.00 37.26 1.85
3764 5746 1.226773 CAGCGCCCTTAAATGCAGC 60.227 57.895 2.29 0.00 0.00 5.25
3769 5751 1.077068 CCCTTAAATGCAGCGGGGA 60.077 57.895 7.07 0.00 36.17 4.81
3822 5804 8.637986 ACAAATGTCTCTAGAGAAGGACATATC 58.362 37.037 23.96 8.91 41.42 1.63
3823 5805 8.637099 CAAATGTCTCTAGAGAAGGACATATCA 58.363 37.037 23.96 14.10 41.42 2.15
3824 5806 8.774546 AATGTCTCTAGAGAAGGACATATCAA 57.225 34.615 23.96 0.00 41.42 2.57
3825 5807 8.774546 ATGTCTCTAGAGAAGGACATATCAAA 57.225 34.615 23.96 0.00 40.94 2.69
3826 5808 8.231692 TGTCTCTAGAGAAGGACATATCAAAG 57.768 38.462 23.96 0.00 39.48 2.77
3827 5809 7.286546 TGTCTCTAGAGAAGGACATATCAAAGG 59.713 40.741 23.96 0.00 39.48 3.11
3828 5810 7.286775 GTCTCTAGAGAAGGACATATCAAAGGT 59.713 40.741 23.96 0.00 39.48 3.50
3829 5811 8.503573 TCTCTAGAGAAGGACATATCAAAGGTA 58.496 37.037 20.31 0.00 33.91 3.08
3830 5812 8.466617 TCTAGAGAAGGACATATCAAAGGTAC 57.533 38.462 0.00 0.00 0.00 3.34
3831 5813 8.059461 TCTAGAGAAGGACATATCAAAGGTACA 58.941 37.037 0.00 0.00 0.00 2.90
3832 5814 7.682787 AGAGAAGGACATATCAAAGGTACAT 57.317 36.000 0.00 0.00 0.00 2.29
3833 5815 8.783660 AGAGAAGGACATATCAAAGGTACATA 57.216 34.615 0.00 0.00 0.00 2.29
3834 5816 9.386122 AGAGAAGGACATATCAAAGGTACATAT 57.614 33.333 0.00 0.00 0.00 1.78
3888 5871 7.472543 ACAGACTTTGTTTTAATGTGTGACTC 58.527 34.615 8.92 0.00 36.31 3.36
3889 5872 6.628856 CAGACTTTGTTTTAATGTGTGACTCG 59.371 38.462 0.00 0.00 0.00 4.18
3920 5904 9.209175 ACACTTTGTACACTCTGAATTATCTTC 57.791 33.333 0.00 0.00 0.00 2.87
3925 5909 7.386059 TGTACACTCTGAATTATCTTCTTGCA 58.614 34.615 0.00 0.00 0.00 4.08
3926 5910 6.981762 ACACTCTGAATTATCTTCTTGCAG 57.018 37.500 0.00 0.00 0.00 4.41
3928 5912 5.879223 CACTCTGAATTATCTTCTTGCAGGT 59.121 40.000 0.00 0.00 0.00 4.00
3930 5914 7.550551 CACTCTGAATTATCTTCTTGCAGGTAA 59.449 37.037 0.00 0.00 0.00 2.85
3931 5915 8.103305 ACTCTGAATTATCTTCTTGCAGGTAAA 58.897 33.333 0.00 0.00 0.00 2.01
3932 5916 8.268850 TCTGAATTATCTTCTTGCAGGTAAAC 57.731 34.615 0.00 0.00 0.00 2.01
3933 5917 7.336931 TCTGAATTATCTTCTTGCAGGTAAACC 59.663 37.037 0.00 0.00 0.00 3.27
3935 5919 7.615365 TGAATTATCTTCTTGCAGGTAAACCAT 59.385 33.333 1.26 0.00 38.89 3.55
3936 5920 9.120538 GAATTATCTTCTTGCAGGTAAACCATA 57.879 33.333 1.26 0.00 38.89 2.74
3939 5923 9.555727 TTATCTTCTTGCAGGTAAACCATATAC 57.444 33.333 1.26 0.00 38.89 1.47
3944 5928 7.723324 TCTTGCAGGTAAACCATATACTACTC 58.277 38.462 1.26 0.00 38.89 2.59
3945 5929 6.415206 TGCAGGTAAACCATATACTACTCC 57.585 41.667 1.26 0.00 38.89 3.85
3946 5930 5.306160 TGCAGGTAAACCATATACTACTCCC 59.694 44.000 1.26 0.00 38.89 4.30
3947 5931 5.543020 GCAGGTAAACCATATACTACTCCCT 59.457 44.000 1.26 0.00 38.89 4.20
3948 5932 6.295180 GCAGGTAAACCATATACTACTCCCTC 60.295 46.154 1.26 0.00 38.89 4.30
3949 5933 6.210984 CAGGTAAACCATATACTACTCCCTCC 59.789 46.154 1.26 0.00 38.89 4.30
3950 5934 5.184671 GGTAAACCATATACTACTCCCTCCG 59.815 48.000 0.00 0.00 35.64 4.63
3951 5935 2.805194 ACCATATACTACTCCCTCCGC 58.195 52.381 0.00 0.00 0.00 5.54
3952 5936 2.100989 CCATATACTACTCCCTCCGCC 58.899 57.143 0.00 0.00 0.00 6.13
3953 5937 2.100989 CATATACTACTCCCTCCGCCC 58.899 57.143 0.00 0.00 0.00 6.13
3954 5938 1.151760 TATACTACTCCCTCCGCCCA 58.848 55.000 0.00 0.00 0.00 5.36
3955 5939 0.263765 ATACTACTCCCTCCGCCCAA 59.736 55.000 0.00 0.00 0.00 4.12
3956 5940 0.041535 TACTACTCCCTCCGCCCAAA 59.958 55.000 0.00 0.00 0.00 3.28
3957 5941 0.838987 ACTACTCCCTCCGCCCAAAA 60.839 55.000 0.00 0.00 0.00 2.44
3958 5942 0.546598 CTACTCCCTCCGCCCAAAAT 59.453 55.000 0.00 0.00 0.00 1.82
3959 5943 1.766496 CTACTCCCTCCGCCCAAAATA 59.234 52.381 0.00 0.00 0.00 1.40
3960 5944 0.996583 ACTCCCTCCGCCCAAAATAA 59.003 50.000 0.00 0.00 0.00 1.40
3961 5945 1.064685 ACTCCCTCCGCCCAAAATAAG 60.065 52.381 0.00 0.00 0.00 1.73
3962 5946 0.996583 TCCCTCCGCCCAAAATAAGT 59.003 50.000 0.00 0.00 0.00 2.24
3963 5947 2.171870 CTCCCTCCGCCCAAAATAAGTA 59.828 50.000 0.00 0.00 0.00 2.24
3964 5948 2.092807 TCCCTCCGCCCAAAATAAGTAC 60.093 50.000 0.00 0.00 0.00 2.73
3965 5949 2.092592 CCCTCCGCCCAAAATAAGTACT 60.093 50.000 0.00 0.00 0.00 2.73
3966 5950 3.135167 CCCTCCGCCCAAAATAAGTACTA 59.865 47.826 0.00 0.00 0.00 1.82
3967 5951 4.384427 CCCTCCGCCCAAAATAAGTACTAA 60.384 45.833 0.00 0.00 0.00 2.24
3968 5952 5.187687 CCTCCGCCCAAAATAAGTACTAAA 58.812 41.667 0.00 0.00 0.00 1.85
3969 5953 5.296035 CCTCCGCCCAAAATAAGTACTAAAG 59.704 44.000 0.00 0.00 0.00 1.85
3970 5954 5.807909 TCCGCCCAAAATAAGTACTAAAGT 58.192 37.500 0.00 0.00 0.00 2.66
3971 5955 6.240145 TCCGCCCAAAATAAGTACTAAAGTT 58.760 36.000 0.00 0.00 0.00 2.66
3972 5956 7.393216 TCCGCCCAAAATAAGTACTAAAGTTA 58.607 34.615 0.00 0.00 0.00 2.24
3973 5957 7.550196 TCCGCCCAAAATAAGTACTAAAGTTAG 59.450 37.037 0.00 0.00 36.82 2.34
3974 5958 7.335171 CCGCCCAAAATAAGTACTAAAGTTAGT 59.665 37.037 8.67 8.67 45.39 2.24
3975 5959 8.173130 CGCCCAAAATAAGTACTAAAGTTAGTG 58.827 37.037 12.92 0.00 43.44 2.74
3976 5960 9.006839 GCCCAAAATAAGTACTAAAGTTAGTGT 57.993 33.333 12.92 2.64 43.44 3.55
3989 5973 9.310716 ACTAAAGTTAGTGTAAAGTTGAGTCAC 57.689 33.333 2.91 0.00 42.13 3.67
3990 5974 9.530633 CTAAAGTTAGTGTAAAGTTGAGTCACT 57.469 33.333 0.00 0.00 41.32 3.41
3991 5975 8.788325 AAAGTTAGTGTAAAGTTGAGTCACTT 57.212 30.769 0.00 0.00 39.54 3.16
3992 5976 9.880157 AAAGTTAGTGTAAAGTTGAGTCACTTA 57.120 29.630 0.00 0.00 39.54 2.24
3998 5982 8.621286 AGTGTAAAGTTGAGTCACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
3999 5983 7.860872 GTGTAAAGTTGAGTCACTTATTTTGGG 59.139 37.037 0.00 0.00 35.87 4.12
4000 5984 7.776030 TGTAAAGTTGAGTCACTTATTTTGGGA 59.224 33.333 0.00 0.00 35.87 4.37
4001 5985 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4002 5986 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
4003 5987 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
4004 5988 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
4005 5989 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
4006 5990 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4007 5991 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
4008 5992 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4009 5993 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4010 5994 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4011 5995 1.073098 ATTTTGGGACGGAGGGAGTT 58.927 50.000 0.00 0.00 0.00 3.01
4012 5996 0.399075 TTTTGGGACGGAGGGAGTTC 59.601 55.000 0.00 0.00 0.00 3.01
4013 5997 0.473117 TTTGGGACGGAGGGAGTTCT 60.473 55.000 0.00 0.00 0.00 3.01
4014 5998 0.903454 TTGGGACGGAGGGAGTTCTC 60.903 60.000 0.00 0.00 0.00 2.87
4015 5999 1.000612 GGGACGGAGGGAGTTCTCT 59.999 63.158 0.00 0.00 34.39 3.10
4016 6000 0.258194 GGGACGGAGGGAGTTCTCTA 59.742 60.000 0.00 0.00 34.39 2.43
4017 6001 1.682740 GGACGGAGGGAGTTCTCTAG 58.317 60.000 0.00 0.00 34.39 2.43
4018 6002 1.212441 GGACGGAGGGAGTTCTCTAGA 59.788 57.143 0.00 0.00 34.39 2.43
4019 6003 2.356947 GGACGGAGGGAGTTCTCTAGAA 60.357 54.545 0.00 0.00 34.39 2.10
4020 6004 3.354467 GACGGAGGGAGTTCTCTAGAAA 58.646 50.000 0.00 0.00 35.58 2.52
4021 6005 3.955551 GACGGAGGGAGTTCTCTAGAAAT 59.044 47.826 0.00 0.00 35.58 2.17
4022 6006 3.955551 ACGGAGGGAGTTCTCTAGAAATC 59.044 47.826 10.84 10.84 45.30 2.17
4023 6007 4.211920 CGGAGGGAGTTCTCTAGAAATCT 58.788 47.826 16.92 2.09 45.34 2.40
4024 6008 4.277423 CGGAGGGAGTTCTCTAGAAATCTC 59.723 50.000 16.92 14.23 46.58 2.75
4028 6012 6.644248 GGGAGTTCTCTAGAAATCTCTACC 57.356 45.833 16.92 6.80 43.86 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
587 2511 4.215399 TGCTAAAACTTGCAGTGTACATCC 59.785 41.667 0.00 0.00 34.84 3.51
616 2540 3.897239 TCAACTTGGTGTGGAAAGTCAT 58.103 40.909 0.00 0.00 35.60 3.06
628 2552 1.238439 CATCGGTGCTTCAACTTGGT 58.762 50.000 0.00 0.00 0.00 3.67
711 2635 9.334947 TGATAAGCAATCCAAACAATTCAAAAA 57.665 25.926 0.00 0.00 33.22 1.94
712 2636 8.772705 GTGATAAGCAATCCAAACAATTCAAAA 58.227 29.630 0.00 0.00 33.22 2.44
713 2637 7.930325 TGTGATAAGCAATCCAAACAATTCAAA 59.070 29.630 0.00 0.00 33.22 2.69
714 2638 7.440198 TGTGATAAGCAATCCAAACAATTCAA 58.560 30.769 0.00 0.00 33.22 2.69
715 2639 6.990798 TGTGATAAGCAATCCAAACAATTCA 58.009 32.000 0.00 0.00 33.22 2.57
716 2640 7.546667 ACATGTGATAAGCAATCCAAACAATTC 59.453 33.333 0.00 0.00 33.22 2.17
717 2641 7.332430 CACATGTGATAAGCAATCCAAACAATT 59.668 33.333 21.64 0.00 33.22 2.32
718 2642 6.814644 CACATGTGATAAGCAATCCAAACAAT 59.185 34.615 21.64 0.00 33.22 2.71
719 2643 6.157904 CACATGTGATAAGCAATCCAAACAA 58.842 36.000 21.64 0.00 33.22 2.83
720 2644 5.243507 ACACATGTGATAAGCAATCCAAACA 59.756 36.000 31.94 0.00 33.22 2.83
721 2645 5.713025 ACACATGTGATAAGCAATCCAAAC 58.287 37.500 31.94 0.00 33.22 2.93
767 2692 7.227314 AGAGAACATTTGGCCTTCAAAATTTTC 59.773 33.333 3.32 10.25 46.93 2.29
772 2697 5.104982 ACAAGAGAACATTTGGCCTTCAAAA 60.105 36.000 3.32 0.00 46.93 2.44
776 2701 4.590850 AACAAGAGAACATTTGGCCTTC 57.409 40.909 3.32 0.00 0.00 3.46
778 2703 3.070015 CCAAACAAGAGAACATTTGGCCT 59.930 43.478 3.32 0.00 43.29 5.19
786 2711 4.938832 TCGTTTCTTCCAAACAAGAGAACA 59.061 37.500 0.00 0.00 33.85 3.18
787 2712 5.479716 TCGTTTCTTCCAAACAAGAGAAC 57.520 39.130 0.00 0.00 33.85 3.01
788 2713 6.503589 TTTCGTTTCTTCCAAACAAGAGAA 57.496 33.333 0.00 0.00 33.85 2.87
789 2714 6.503589 TTTTCGTTTCTTCCAAACAAGAGA 57.496 33.333 0.00 0.00 33.85 3.10
790 2715 7.027161 TCTTTTTCGTTTCTTCCAAACAAGAG 58.973 34.615 0.00 0.00 33.85 2.85
791 2716 6.915349 TCTTTTTCGTTTCTTCCAAACAAGA 58.085 32.000 0.00 0.00 0.00 3.02
792 2717 7.575332 TTCTTTTTCGTTTCTTCCAAACAAG 57.425 32.000 0.00 0.00 0.00 3.16
793 2718 7.948278 TTTCTTTTTCGTTTCTTCCAAACAA 57.052 28.000 0.00 0.00 0.00 2.83
849 2774 5.643777 ACACTATCTACACCATTCAGTTTGC 59.356 40.000 0.00 0.00 0.00 3.68
863 2788 4.393680 CAGGATCGCCTCTACACTATCTAC 59.606 50.000 0.00 0.00 44.80 2.59
874 2799 1.220206 CAACTGCAGGATCGCCTCT 59.780 57.895 19.93 0.00 44.80 3.69
916 2841 4.357279 AGGACCAAGGCAGCTGGC 62.357 66.667 31.58 31.58 43.74 4.85
917 2842 2.360852 CAGGACCAAGGCAGCTGG 60.361 66.667 17.12 0.79 40.05 4.85
918 2843 1.673665 GTCAGGACCAAGGCAGCTG 60.674 63.158 10.11 10.11 0.00 4.24
919 2844 2.753029 GTCAGGACCAAGGCAGCT 59.247 61.111 0.00 0.00 0.00 4.24
920 2845 2.743928 CGTCAGGACCAAGGCAGC 60.744 66.667 0.00 0.00 0.00 5.25
921 2846 0.535102 AAACGTCAGGACCAAGGCAG 60.535 55.000 0.00 0.00 0.00 4.85
930 2855 4.127171 CCTTTTCTCTTGAAACGTCAGGA 58.873 43.478 0.00 0.00 41.34 3.86
933 2858 4.766375 ACTCCTTTTCTCTTGAAACGTCA 58.234 39.130 0.00 0.00 41.34 4.35
950 2875 2.779506 CGGCAACTAAAAAGGACTCCT 58.220 47.619 0.00 0.00 33.87 3.69
951 2876 1.199327 GCGGCAACTAAAAAGGACTCC 59.801 52.381 0.00 0.00 0.00 3.85
965 2896 3.185299 TTTTCCTCCTCGGCGGCAA 62.185 57.895 10.53 0.00 0.00 4.52
973 2904 5.799213 TGAATTCTGACTCTTTTCCTCCTC 58.201 41.667 7.05 0.00 0.00 3.71
974 2905 5.832539 TGAATTCTGACTCTTTTCCTCCT 57.167 39.130 7.05 0.00 0.00 3.69
975 2906 6.263168 TGTTTGAATTCTGACTCTTTTCCTCC 59.737 38.462 7.05 0.00 0.00 4.30
976 2907 7.264373 TGTTTGAATTCTGACTCTTTTCCTC 57.736 36.000 7.05 0.00 0.00 3.71
977 2908 7.255730 CCATGTTTGAATTCTGACTCTTTTCCT 60.256 37.037 7.05 0.00 0.00 3.36
978 2909 6.865205 CCATGTTTGAATTCTGACTCTTTTCC 59.135 38.462 7.05 0.00 0.00 3.13
979 2910 6.364435 GCCATGTTTGAATTCTGACTCTTTTC 59.636 38.462 7.05 0.00 0.00 2.29
982 2913 4.083110 CGCCATGTTTGAATTCTGACTCTT 60.083 41.667 7.05 0.00 0.00 2.85
996 2935 2.676471 GTGGAGGCCGCCATGTTT 60.676 61.111 32.07 0.00 40.68 2.83
1530 3469 0.618981 AACCCATCTCCCGGAAGAAC 59.381 55.000 0.73 0.00 0.00 3.01
1605 3544 2.291465 CAGTGTTGTCACCTGGAACATG 59.709 50.000 0.00 0.00 44.83 3.21
1620 3559 1.529244 GGCCTGGCTGAACAGTGTT 60.529 57.895 19.68 8.61 36.75 3.32
1651 3590 2.297129 GCTTCAGCCTGAGGTCCCT 61.297 63.158 5.67 0.00 34.31 4.20
1660 3599 1.299321 GAGGAGCAAGCTTCAGCCT 59.701 57.895 9.61 9.61 43.38 4.58
1671 3610 1.225426 GGCATCATGGTGAGGAGCA 59.775 57.895 11.02 0.00 27.97 4.26
1679 3627 0.177836 TTCATCGTCGGCATCATGGT 59.822 50.000 0.00 0.00 0.00 3.55
1683 3631 1.476488 TCTTCTTCATCGTCGGCATCA 59.524 47.619 0.00 0.00 0.00 3.07
1686 3634 1.544246 TCTTCTTCTTCATCGTCGGCA 59.456 47.619 0.00 0.00 0.00 5.69
1688 3636 3.119459 TCCTTCTTCTTCTTCATCGTCGG 60.119 47.826 0.00 0.00 0.00 4.79
1689 3637 4.098055 TCCTTCTTCTTCTTCATCGTCG 57.902 45.455 0.00 0.00 0.00 5.12
1692 3640 5.233988 ACAGTTCCTTCTTCTTCTTCATCG 58.766 41.667 0.00 0.00 0.00 3.84
1697 3645 3.388350 ACCGACAGTTCCTTCTTCTTCTT 59.612 43.478 0.00 0.00 0.00 2.52
1698 3646 2.966516 ACCGACAGTTCCTTCTTCTTCT 59.033 45.455 0.00 0.00 0.00 2.85
1699 3647 3.388345 ACCGACAGTTCCTTCTTCTTC 57.612 47.619 0.00 0.00 0.00 2.87
1700 3648 3.840124 AACCGACAGTTCCTTCTTCTT 57.160 42.857 0.00 0.00 30.99 2.52
1701 3649 3.729966 GAAACCGACAGTTCCTTCTTCT 58.270 45.455 0.00 0.00 37.88 2.85
1702 3650 2.475487 CGAAACCGACAGTTCCTTCTTC 59.525 50.000 0.00 0.00 37.88 2.87
1703 3651 2.101917 TCGAAACCGACAGTTCCTTCTT 59.898 45.455 0.00 0.00 37.88 2.52
1704 3652 1.684983 TCGAAACCGACAGTTCCTTCT 59.315 47.619 0.00 0.00 37.88 2.85
1705 3653 2.059541 CTCGAAACCGACAGTTCCTTC 58.940 52.381 0.00 0.00 37.88 3.46
1706 3654 1.684983 TCTCGAAACCGACAGTTCCTT 59.315 47.619 0.00 0.00 37.88 3.36
1707 3655 1.269998 CTCTCGAAACCGACAGTTCCT 59.730 52.381 0.00 0.00 37.88 3.36
1708 3656 1.699343 CTCTCGAAACCGACAGTTCC 58.301 55.000 0.00 0.00 37.88 3.62
1728 3676 0.734253 CCTGACGCCTGAAGAAGTCG 60.734 60.000 0.00 0.00 36.49 4.18
1797 3745 2.881352 GTGTAGACGCCGCTGAGC 60.881 66.667 0.00 0.00 0.00 4.26
1833 3781 2.355837 GTGTGCGAGTTCTCGGCA 60.356 61.111 20.97 16.31 0.00 5.69
1879 3827 4.965858 CGCGATCTCCGGCTCGAC 62.966 72.222 20.41 12.42 37.05 4.20
1903 3851 8.391702 ATTGTGGATCAATATTACCTGCAGGTC 61.392 40.741 41.00 22.63 43.82 3.85
1941 3889 8.090214 ACGGTTTACACAAGTACAATGTATACT 58.910 33.333 16.59 0.00 33.72 2.12
1942 3890 8.164153 CACGGTTTACACAAGTACAATGTATAC 58.836 37.037 0.00 9.12 32.95 1.47
1943 3891 7.871973 ACACGGTTTACACAAGTACAATGTATA 59.128 33.333 0.00 0.00 0.00 1.47
1944 3892 6.707161 ACACGGTTTACACAAGTACAATGTAT 59.293 34.615 0.00 0.00 0.00 2.29
1945 3893 6.047870 ACACGGTTTACACAAGTACAATGTA 58.952 36.000 4.26 2.58 0.00 2.29
1946 3894 4.877251 ACACGGTTTACACAAGTACAATGT 59.123 37.500 0.00 0.00 0.00 2.71
1947 3895 5.412526 ACACGGTTTACACAAGTACAATG 57.587 39.130 0.00 0.00 0.00 2.82
1948 3896 6.439675 AAACACGGTTTACACAAGTACAAT 57.560 33.333 0.00 0.00 0.00 2.71
1949 3897 5.876612 AAACACGGTTTACACAAGTACAA 57.123 34.783 0.00 0.00 0.00 2.41
1950 3898 7.551035 AATAAACACGGTTTACACAAGTACA 57.449 32.000 10.22 0.00 0.00 2.90
1951 3899 8.337532 AGAAATAAACACGGTTTACACAAGTAC 58.662 33.333 10.22 0.00 0.00 2.73
1953 3901 7.190871 CAGAAATAAACACGGTTTACACAAGT 58.809 34.615 10.22 0.00 0.00 3.16
1954 3902 6.141685 GCAGAAATAAACACGGTTTACACAAG 59.858 38.462 10.22 4.61 0.00 3.16
1955 3903 5.972382 GCAGAAATAAACACGGTTTACACAA 59.028 36.000 10.22 0.00 0.00 3.33
1956 3904 5.512473 GCAGAAATAAACACGGTTTACACA 58.488 37.500 10.22 0.00 0.00 3.72
1957 3905 4.609708 CGCAGAAATAAACACGGTTTACAC 59.390 41.667 10.22 6.44 0.00 2.90
1958 3906 4.510711 TCGCAGAAATAAACACGGTTTACA 59.489 37.500 10.22 0.00 0.00 2.41
1959 3907 5.021120 TCGCAGAAATAAACACGGTTTAC 57.979 39.130 10.22 1.47 0.00 2.01
1961 3909 4.472286 CATCGCAGAAATAAACACGGTTT 58.528 39.130 7.11 7.11 43.58 3.27
1962 3910 3.669557 GCATCGCAGAAATAAACACGGTT 60.670 43.478 0.00 0.00 43.58 4.44
1963 3911 2.159572 GCATCGCAGAAATAAACACGGT 60.160 45.455 0.00 0.00 43.58 4.83
1964 3912 2.440501 GCATCGCAGAAATAAACACGG 58.559 47.619 0.00 0.00 43.58 4.94
1966 3914 3.764885 AGGCATCGCAGAAATAAACAC 57.235 42.857 0.00 0.00 43.58 3.32
1967 3915 4.332543 CAGTAGGCATCGCAGAAATAAACA 59.667 41.667 0.00 0.00 43.58 2.83
1968 3916 4.570772 TCAGTAGGCATCGCAGAAATAAAC 59.429 41.667 0.00 0.00 43.58 2.01
1969 3917 4.765273 TCAGTAGGCATCGCAGAAATAAA 58.235 39.130 0.00 0.00 43.58 1.40
1970 3918 4.400529 TCAGTAGGCATCGCAGAAATAA 57.599 40.909 0.00 0.00 43.58 1.40
1971 3919 4.607293 ATCAGTAGGCATCGCAGAAATA 57.393 40.909 0.00 0.00 43.58 1.40
1972 3920 2.988010 TCAGTAGGCATCGCAGAAAT 57.012 45.000 0.00 0.00 43.58 2.17
1973 3921 2.988010 ATCAGTAGGCATCGCAGAAA 57.012 45.000 0.00 0.00 43.58 2.52
1974 3922 3.056536 GGATATCAGTAGGCATCGCAGAA 60.057 47.826 4.83 0.00 43.58 3.02
1975 3923 2.493675 GGATATCAGTAGGCATCGCAGA 59.506 50.000 4.83 0.00 45.75 4.26
1976 3924 2.232208 TGGATATCAGTAGGCATCGCAG 59.768 50.000 4.83 0.00 0.00 5.18
1977 3925 2.247358 TGGATATCAGTAGGCATCGCA 58.753 47.619 4.83 0.00 0.00 5.10
1978 3926 3.193263 CATGGATATCAGTAGGCATCGC 58.807 50.000 4.83 0.00 0.00 4.58
1979 3927 3.118847 AGCATGGATATCAGTAGGCATCG 60.119 47.826 4.83 0.00 0.00 3.84
1980 3928 4.081254 TCAGCATGGATATCAGTAGGCATC 60.081 45.833 4.83 0.00 36.16 3.91
1981 3929 3.842436 TCAGCATGGATATCAGTAGGCAT 59.158 43.478 4.83 0.00 36.16 4.40
1982 3930 3.242011 TCAGCATGGATATCAGTAGGCA 58.758 45.455 4.83 0.00 36.16 4.75
1983 3931 3.969287 TCAGCATGGATATCAGTAGGC 57.031 47.619 4.83 3.92 36.16 3.93
1984 3932 5.480642 AGTTCAGCATGGATATCAGTAGG 57.519 43.478 4.83 0.00 36.16 3.18
1985 3933 6.765036 ACAAAGTTCAGCATGGATATCAGTAG 59.235 38.462 4.83 0.00 36.16 2.57
1986 3934 6.653020 ACAAAGTTCAGCATGGATATCAGTA 58.347 36.000 4.83 0.00 36.16 2.74
1987 3935 5.503927 ACAAAGTTCAGCATGGATATCAGT 58.496 37.500 4.83 0.00 36.16 3.41
1988 3936 5.587443 TGACAAAGTTCAGCATGGATATCAG 59.413 40.000 4.83 0.00 36.16 2.90
1989 3937 5.355071 GTGACAAAGTTCAGCATGGATATCA 59.645 40.000 4.83 0.00 36.16 2.15
1990 3938 5.355071 TGTGACAAAGTTCAGCATGGATATC 59.645 40.000 0.00 0.00 36.16 1.63
1991 3939 5.255687 TGTGACAAAGTTCAGCATGGATAT 58.744 37.500 0.00 0.00 36.16 1.63
1992 3940 4.650734 TGTGACAAAGTTCAGCATGGATA 58.349 39.130 0.00 0.00 36.16 2.59
1993 3941 3.489355 TGTGACAAAGTTCAGCATGGAT 58.511 40.909 0.00 0.00 36.16 3.41
1994 3942 2.929641 TGTGACAAAGTTCAGCATGGA 58.070 42.857 0.00 0.00 36.16 3.41
1995 3943 3.928727 ATGTGACAAAGTTCAGCATGG 57.071 42.857 0.00 0.00 36.16 3.66
1996 3944 8.829612 TGTATATATGTGACAAAGTTCAGCATG 58.170 33.333 0.00 0.00 37.54 4.06
1997 3945 8.962884 TGTATATATGTGACAAAGTTCAGCAT 57.037 30.769 0.00 0.00 0.00 3.79
1998 3946 7.495606 CCTGTATATATGTGACAAAGTTCAGCA 59.504 37.037 0.00 0.00 0.00 4.41
2126 4074 1.724234 CTAGACGCTCGATCGCAGC 60.724 63.158 21.90 21.90 0.00 5.25
2134 4082 2.597971 CGAAACTAGCTCTAGACGCTCG 60.598 54.545 16.72 13.94 38.86 5.03
2143 4091 0.179194 GCGTCGACGAAACTAGCTCT 60.179 55.000 39.74 0.00 43.02 4.09
2149 4097 1.273455 CGAAAGGCGTCGACGAAACT 61.273 55.000 39.74 28.57 43.86 2.66
2179 4127 5.915758 CAGTATCTCAACAGCCTTCGTATAC 59.084 44.000 0.00 0.00 0.00 1.47
2182 4130 4.014406 TCAGTATCTCAACAGCCTTCGTA 58.986 43.478 0.00 0.00 0.00 3.43
2185 4133 4.125703 CCATCAGTATCTCAACAGCCTTC 58.874 47.826 0.00 0.00 0.00 3.46
2205 4153 2.189191 CTTGCTACCAGCTGAGCCCA 62.189 60.000 21.08 9.68 42.97 5.36
2236 4184 4.989279 ATCGATTCCCCATTCAACTTTG 57.011 40.909 0.00 0.00 0.00 2.77
2239 4187 4.580580 GCTAAATCGATTCCCCATTCAACT 59.419 41.667 11.83 0.00 0.00 3.16
2266 4214 7.990917 ACAACTATATATACCTCTCATGCTCG 58.009 38.462 0.00 0.00 0.00 5.03
2282 4230 7.597288 TCTGCACAGGTGTATACAACTATAT 57.403 36.000 22.80 9.16 43.10 0.86
2287 4235 5.416083 TGTATCTGCACAGGTGTATACAAC 58.584 41.667 13.28 13.28 33.85 3.32
2294 4242 4.826274 ATAACTGTATCTGCACAGGTGT 57.174 40.909 4.10 0.00 45.95 4.16
2300 4248 7.482654 TCAATGCTTATAACTGTATCTGCAC 57.517 36.000 0.00 0.00 33.64 4.57
2316 4264 7.436080 CGGCAAATAACAGAAATATCAATGCTT 59.564 33.333 0.00 0.00 0.00 3.91
2317 4265 6.919662 CGGCAAATAACAGAAATATCAATGCT 59.080 34.615 0.00 0.00 0.00 3.79
2321 4269 7.151999 ACACGGCAAATAACAGAAATATCAA 57.848 32.000 0.00 0.00 0.00 2.57
2339 4287 1.395262 CAAAAACCCAAACAACACGGC 59.605 47.619 0.00 0.00 0.00 5.68
2341 4289 2.413453 CCACAAAAACCCAAACAACACG 59.587 45.455 0.00 0.00 0.00 4.49
2342 4290 3.187432 CACCACAAAAACCCAAACAACAC 59.813 43.478 0.00 0.00 0.00 3.32
2343 4291 3.071023 TCACCACAAAAACCCAAACAACA 59.929 39.130 0.00 0.00 0.00 3.33
2356 4313 5.984926 GCAAGAAATTCAGAATCACCACAAA 59.015 36.000 0.00 0.00 0.00 2.83
2361 4318 4.925646 GGTTGCAAGAAATTCAGAATCACC 59.074 41.667 0.00 0.00 0.00 4.02
2369 4326 4.589216 CCTTCAGGTTGCAAGAAATTCA 57.411 40.909 0.00 0.00 0.00 2.57
2411 4369 7.820648 AGTTATAAACAATGACAGGCTTCTTG 58.179 34.615 0.00 0.00 0.00 3.02
2414 4372 7.201705 GGGTAGTTATAAACAATGACAGGCTTC 60.202 40.741 0.00 0.00 0.00 3.86
2426 4384 2.101249 CCCTCGCGGGTAGTTATAAACA 59.899 50.000 4.71 0.00 46.12 2.83
2456 4414 6.292919 GGTCATCGTTGAGCCTCATATAAAAC 60.293 42.308 13.47 0.00 43.15 2.43
2489 4447 1.561076 AGAACATCCATAGCAGCCACA 59.439 47.619 0.00 0.00 0.00 4.17
2510 4468 3.521937 CTCCCTTATACACCTTGGGAACA 59.478 47.826 0.00 0.00 45.22 3.18
2522 4480 6.769512 TCAACATATTGCTCCTCCCTTATAC 58.230 40.000 0.00 0.00 35.63 1.47
2594 4552 7.202001 CCACATCCAGTATCAGTTAAGGTATCA 60.202 40.741 0.00 0.00 0.00 2.15
2595 4553 7.155328 CCACATCCAGTATCAGTTAAGGTATC 58.845 42.308 0.00 0.00 0.00 2.24
2605 4563 2.545952 GGTACGCCACATCCAGTATCAG 60.546 54.545 0.00 0.00 34.09 2.90
2610 4568 0.614979 AGAGGTACGCCACATCCAGT 60.615 55.000 0.00 0.00 38.77 4.00
2611 4569 0.103208 GAGAGGTACGCCACATCCAG 59.897 60.000 0.00 0.00 38.77 3.86
2613 4571 0.103208 CTGAGAGGTACGCCACATCC 59.897 60.000 0.00 0.00 38.77 3.51
2625 4583 3.423539 TCAATTCACCAACCTGAGAGG 57.576 47.619 0.00 0.00 42.49 3.69
2653 4611 1.454111 GCGCTCCTCCCTCTGACTA 60.454 63.158 0.00 0.00 0.00 2.59
2676 4634 6.036408 GTGATGGTACCGTTGTTTAAGGATAC 59.964 42.308 8.35 0.00 0.00 2.24
2720 4678 9.823647 TTTGTAGTATCCTGCAATTTTGAAAAA 57.176 25.926 0.00 0.00 41.93 1.94
2721 4679 9.995003 ATTTGTAGTATCCTGCAATTTTGAAAA 57.005 25.926 0.00 0.00 41.93 2.29
2722 4680 9.421806 CATTTGTAGTATCCTGCAATTTTGAAA 57.578 29.630 0.00 0.00 41.93 2.69
2723 4681 8.584157 ACATTTGTAGTATCCTGCAATTTTGAA 58.416 29.630 0.00 0.00 41.93 2.69
2724 4682 8.121305 ACATTTGTAGTATCCTGCAATTTTGA 57.879 30.769 0.00 0.00 41.93 2.69
2725 4683 8.761575 AACATTTGTAGTATCCTGCAATTTTG 57.238 30.769 0.00 0.00 41.93 2.44
2752 4710 9.487790 CATGGATTGGTTGTTACAAAGTTAATT 57.512 29.630 0.00 0.00 0.00 1.40
2753 4711 8.646900 ACATGGATTGGTTGTTACAAAGTTAAT 58.353 29.630 0.00 0.00 0.00 1.40
2754 4712 8.012957 ACATGGATTGGTTGTTACAAAGTTAA 57.987 30.769 0.00 0.00 0.00 2.01
2755 4713 7.504238 AGACATGGATTGGTTGTTACAAAGTTA 59.496 33.333 0.00 0.00 0.00 2.24
2756 4714 6.323739 AGACATGGATTGGTTGTTACAAAGTT 59.676 34.615 0.00 0.00 0.00 2.66
2792 4750 7.120726 GTCCACTACAAGTGCCTTAATTTGTAT 59.879 37.037 1.43 0.00 44.63 2.29
2841 4800 0.469518 ACCGGCCTCCAGTATCCTAC 60.470 60.000 0.00 0.00 0.00 3.18
2866 4825 6.339730 CAGATAGAACTCATAGGATGCCATC 58.660 44.000 0.00 0.00 0.00 3.51
2871 4830 6.015918 AGGTCCAGATAGAACTCATAGGATG 58.984 44.000 0.00 0.00 0.00 3.51
2935 4894 1.148048 GAGCATCCTCTCCAAGCCC 59.852 63.158 0.00 0.00 35.16 5.19
2965 4924 1.003580 TCTCTGATGTTGTCAAGGCCC 59.996 52.381 0.00 0.00 36.14 5.80
3004 4963 2.686106 TCGGCCTTCCCAGGGTAC 60.686 66.667 5.01 0.00 41.21 3.34
3025 4984 2.486907 GGGAGGCCAATCAGATCTTCAG 60.487 54.545 5.01 0.00 0.00 3.02
3045 5004 3.568538 GACAACTTGTGCTATTGCTTGG 58.431 45.455 0.00 0.00 40.48 3.61
3046 5005 3.004629 TGGACAACTTGTGCTATTGCTTG 59.995 43.478 13.84 0.00 39.59 4.01
3081 5040 4.281182 CCTATTACCACTGTACCCTAGCTG 59.719 50.000 0.00 0.00 0.00 4.24
3092 5051 7.272978 ACTATGCTTTACACCTATTACCACTG 58.727 38.462 0.00 0.00 0.00 3.66
3127 5086 7.764443 GTCTCACTTATGGACAACTTATGCTAA 59.236 37.037 0.00 0.00 0.00 3.09
3128 5087 7.124298 AGTCTCACTTATGGACAACTTATGCTA 59.876 37.037 0.00 0.00 31.83 3.49
3129 5088 6.070538 AGTCTCACTTATGGACAACTTATGCT 60.071 38.462 0.00 0.00 31.83 3.79
3130 5089 6.109359 AGTCTCACTTATGGACAACTTATGC 58.891 40.000 0.00 0.00 31.83 3.14
3131 5090 7.923344 CCTAGTCTCACTTATGGACAACTTATG 59.077 40.741 0.00 0.00 31.83 1.90
3132 5091 7.839705 TCCTAGTCTCACTTATGGACAACTTAT 59.160 37.037 0.00 0.00 31.83 1.73
3147 5106 3.242804 GCACGTATGACTCCTAGTCTCAC 60.243 52.174 8.42 5.42 45.27 3.51
3161 5120 6.812481 AACTATGATATATGCGCACGTATG 57.188 37.500 14.90 4.93 30.49 2.39
3169 5128 8.876790 ACATCATCACAAACTATGATATATGCG 58.123 33.333 0.00 0.00 40.10 4.73
3178 5137 8.722480 TCTAAAGGACATCATCACAAACTATG 57.278 34.615 0.00 0.00 0.00 2.23
3181 5140 7.497249 GCTATCTAAAGGACATCATCACAAACT 59.503 37.037 0.00 0.00 0.00 2.66
3183 5142 7.280876 GTGCTATCTAAAGGACATCATCACAAA 59.719 37.037 0.00 0.00 37.72 2.83
3184 5143 6.763135 GTGCTATCTAAAGGACATCATCACAA 59.237 38.462 0.00 0.00 37.72 3.33
3185 5144 6.127083 TGTGCTATCTAAAGGACATCATCACA 60.127 38.462 0.00 0.00 42.12 3.58
3186 5145 6.283694 TGTGCTATCTAAAGGACATCATCAC 58.716 40.000 0.00 0.00 42.12 3.06
3187 5146 6.484364 TGTGCTATCTAAAGGACATCATCA 57.516 37.500 0.00 0.00 42.12 3.07
3188 5147 7.792374 TTTGTGCTATCTAAAGGACATCATC 57.208 36.000 0.00 0.00 45.64 2.92
3189 5148 8.579850 TTTTTGTGCTATCTAAAGGACATCAT 57.420 30.769 0.00 0.00 45.64 2.45
3193 5152 9.162764 GACTATTTTTGTGCTATCTAAAGGACA 57.837 33.333 0.00 0.00 44.83 4.02
3267 5232 8.121305 TGCTCCATAACAACAATTCAATTAGT 57.879 30.769 0.00 0.00 0.00 2.24
3285 5250 6.211184 TGGTCTGTTTTTCATTTATGCTCCAT 59.789 34.615 0.00 0.00 0.00 3.41
3288 5253 5.574443 GCTGGTCTGTTTTTCATTTATGCTC 59.426 40.000 0.00 0.00 0.00 4.26
3297 5262 2.057137 AGCAGCTGGTCTGTTTTTCA 57.943 45.000 13.85 0.00 44.66 2.69
3314 5279 1.384989 TACTGCAGGGACGAGCTAGC 61.385 60.000 19.93 6.62 35.42 3.42
3351 5318 2.571212 AGACACGCCTGAATTGAACAA 58.429 42.857 0.00 0.00 0.00 2.83
3354 5321 3.064207 GTGTAGACACGCCTGAATTGAA 58.936 45.455 0.00 0.00 37.10 2.69
3402 5369 8.941995 TTAAGCTGGAAGAGAGAAGCTATATA 57.058 34.615 0.00 0.00 45.04 0.86
3444 5411 6.416161 GCAGATCAAGAGAAACAAGTTTGAAC 59.584 38.462 2.45 0.00 32.21 3.18
3451 5418 3.415212 TGGGCAGATCAAGAGAAACAAG 58.585 45.455 0.00 0.00 0.00 3.16
3484 5451 8.939929 TGAACTGTAAGATAAGAGCTTTTGATG 58.060 33.333 0.00 0.00 37.43 3.07
3485 5452 9.678260 ATGAACTGTAAGATAAGAGCTTTTGAT 57.322 29.630 0.00 0.00 37.43 2.57
3541 5508 3.220110 ACGTGTAAGAGAAGACCACTCA 58.780 45.455 0.00 0.00 36.91 3.41
3542 5509 3.919223 ACGTGTAAGAGAAGACCACTC 57.081 47.619 0.00 0.00 34.95 3.51
3625 5604 9.918630 CTTCAAGTTGGAAATACAAAGATTCAT 57.081 29.630 2.34 0.00 31.17 2.57
3627 5606 7.329471 GGCTTCAAGTTGGAAATACAAAGATTC 59.671 37.037 2.34 0.00 31.17 2.52
3629 5608 6.494835 AGGCTTCAAGTTGGAAATACAAAGAT 59.505 34.615 2.34 0.00 31.17 2.40
3634 5613 5.472137 GTGTAGGCTTCAAGTTGGAAATACA 59.528 40.000 2.34 1.33 0.00 2.29
3635 5614 5.390567 CGTGTAGGCTTCAAGTTGGAAATAC 60.391 44.000 2.34 0.00 0.00 1.89
3636 5615 4.693566 CGTGTAGGCTTCAAGTTGGAAATA 59.306 41.667 2.34 0.00 0.00 1.40
3637 5616 3.502211 CGTGTAGGCTTCAAGTTGGAAAT 59.498 43.478 2.34 0.00 0.00 2.17
3639 5618 2.158871 ACGTGTAGGCTTCAAGTTGGAA 60.159 45.455 6.87 0.00 0.00 3.53
3642 5621 2.221055 GTGACGTGTAGGCTTCAAGTTG 59.779 50.000 13.22 0.00 0.00 3.16
3644 5623 1.411246 TGTGACGTGTAGGCTTCAAGT 59.589 47.619 12.02 12.02 0.00 3.16
3645 5624 2.148916 TGTGACGTGTAGGCTTCAAG 57.851 50.000 5.58 5.58 0.00 3.02
3647 5626 2.479837 CTTTGTGACGTGTAGGCTTCA 58.520 47.619 0.00 0.00 0.00 3.02
3648 5627 1.194772 GCTTTGTGACGTGTAGGCTTC 59.805 52.381 0.00 0.00 0.00 3.86
3649 5628 1.226746 GCTTTGTGACGTGTAGGCTT 58.773 50.000 0.00 0.00 0.00 4.35
3652 5631 0.506932 CGTGCTTTGTGACGTGTAGG 59.493 55.000 0.00 0.00 0.00 3.18
3653 5632 1.483316 TCGTGCTTTGTGACGTGTAG 58.517 50.000 0.00 0.00 36.91 2.74
3654 5633 1.790043 CATCGTGCTTTGTGACGTGTA 59.210 47.619 0.00 0.00 36.91 2.90
3655 5634 0.581529 CATCGTGCTTTGTGACGTGT 59.418 50.000 0.00 0.00 36.91 4.49
3657 5636 0.249699 TCCATCGTGCTTTGTGACGT 60.250 50.000 0.00 0.00 36.91 4.34
3658 5637 0.163788 GTCCATCGTGCTTTGTGACG 59.836 55.000 0.00 0.00 36.91 4.35
3659 5638 0.163788 CGTCCATCGTGCTTTGTGAC 59.836 55.000 0.00 0.00 34.52 3.67
3660 5639 0.032815 TCGTCCATCGTGCTTTGTGA 59.967 50.000 0.00 0.00 40.80 3.58
3661 5640 1.078709 ATCGTCCATCGTGCTTTGTG 58.921 50.000 0.00 0.00 40.80 3.33
3662 5641 1.464608 CAATCGTCCATCGTGCTTTGT 59.535 47.619 0.00 0.00 40.80 2.83
3663 5642 1.731709 TCAATCGTCCATCGTGCTTTG 59.268 47.619 0.00 0.00 40.80 2.77
3664 5643 2.093306 TCAATCGTCCATCGTGCTTT 57.907 45.000 0.00 0.00 40.80 3.51
3666 5645 1.136891 TGATCAATCGTCCATCGTGCT 59.863 47.619 0.00 0.00 40.80 4.40
3705 5687 2.789409 ACACAACTCATCCTTAGGCC 57.211 50.000 0.00 0.00 0.00 5.19
3710 5692 4.818546 CACTTCAGAACACAACTCATCCTT 59.181 41.667 0.00 0.00 0.00 3.36
3722 5704 4.286808 TGATCCTTCCATCACTTCAGAACA 59.713 41.667 0.00 0.00 0.00 3.18
3723 5705 4.633565 GTGATCCTTCCATCACTTCAGAAC 59.366 45.833 6.37 0.00 46.37 3.01
3747 5729 2.764314 CGCTGCATTTAAGGGCGCT 61.764 57.895 7.64 0.00 39.42 5.92
3757 5739 1.920734 TACACCATCCCCGCTGCATT 61.921 55.000 0.00 0.00 0.00 3.56
3764 5746 3.599343 CATATGACATACACCATCCCCG 58.401 50.000 0.00 0.00 0.00 5.73
3769 5751 5.827797 GGAACAACCATATGACATACACCAT 59.172 40.000 3.65 0.00 38.79 3.55
3803 5785 7.358263 ACCTTTGATATGTCCTTCTCTAGAGA 58.642 38.462 18.76 18.76 35.27 3.10
3865 5848 6.238374 CCGAGTCACACATTAAAACAAAGTCT 60.238 38.462 0.00 0.00 0.00 3.24
3870 5853 5.354513 TGAACCGAGTCACACATTAAAACAA 59.645 36.000 0.00 0.00 0.00 2.83
3882 5865 2.277084 ACAAAGTGTGAACCGAGTCAC 58.723 47.619 10.49 10.49 46.74 3.67
3888 5871 3.245284 CAGAGTGTACAAAGTGTGAACCG 59.755 47.826 0.00 0.00 0.00 4.44
3889 5872 4.439057 TCAGAGTGTACAAAGTGTGAACC 58.561 43.478 0.00 0.00 0.00 3.62
3920 5904 6.929606 GGAGTAGTATATGGTTTACCTGCAAG 59.070 42.308 0.00 0.00 36.82 4.01
3923 5907 5.543020 AGGGAGTAGTATATGGTTTACCTGC 59.457 44.000 0.00 0.00 36.82 4.85
3925 5909 6.321321 GGAGGGAGTAGTATATGGTTTACCT 58.679 44.000 0.00 0.00 36.82 3.08
3926 5910 5.184671 CGGAGGGAGTAGTATATGGTTTACC 59.815 48.000 0.00 0.00 0.00 2.85
3928 5912 4.768968 GCGGAGGGAGTAGTATATGGTTTA 59.231 45.833 0.00 0.00 0.00 2.01
3930 5914 3.163467 GCGGAGGGAGTAGTATATGGTT 58.837 50.000 0.00 0.00 0.00 3.67
3931 5915 2.557005 GGCGGAGGGAGTAGTATATGGT 60.557 54.545 0.00 0.00 0.00 3.55
3932 5916 2.100989 GGCGGAGGGAGTAGTATATGG 58.899 57.143 0.00 0.00 0.00 2.74
3933 5917 2.100989 GGGCGGAGGGAGTAGTATATG 58.899 57.143 0.00 0.00 0.00 1.78
3935 5919 1.151760 TGGGCGGAGGGAGTAGTATA 58.848 55.000 0.00 0.00 0.00 1.47
3936 5920 0.263765 TTGGGCGGAGGGAGTAGTAT 59.736 55.000 0.00 0.00 0.00 2.12
3938 5922 0.838987 TTTTGGGCGGAGGGAGTAGT 60.839 55.000 0.00 0.00 0.00 2.73
3939 5923 0.546598 ATTTTGGGCGGAGGGAGTAG 59.453 55.000 0.00 0.00 0.00 2.57
3944 5928 2.092592 AGTACTTATTTTGGGCGGAGGG 60.093 50.000 0.00 0.00 0.00 4.30
3945 5929 3.277142 AGTACTTATTTTGGGCGGAGG 57.723 47.619 0.00 0.00 0.00 4.30
3946 5930 5.878669 ACTTTAGTACTTATTTTGGGCGGAG 59.121 40.000 0.00 0.00 0.00 4.63
3947 5931 5.807909 ACTTTAGTACTTATTTTGGGCGGA 58.192 37.500 0.00 0.00 0.00 5.54
3948 5932 6.505044 AACTTTAGTACTTATTTTGGGCGG 57.495 37.500 0.00 0.00 0.00 6.13
3949 5933 8.173130 CACTAACTTTAGTACTTATTTTGGGCG 58.827 37.037 0.00 0.00 41.82 6.13
3950 5934 9.006839 ACACTAACTTTAGTACTTATTTTGGGC 57.993 33.333 0.00 0.00 41.82 5.36
3963 5947 9.310716 GTGACTCAACTTTACACTAACTTTAGT 57.689 33.333 0.00 0.00 44.42 2.24
3964 5948 9.530633 AGTGACTCAACTTTACACTAACTTTAG 57.469 33.333 0.00 0.00 39.52 1.85
3965 5949 9.880157 AAGTGACTCAACTTTACACTAACTTTA 57.120 29.630 0.00 0.00 40.23 1.85
3966 5950 8.788325 AAGTGACTCAACTTTACACTAACTTT 57.212 30.769 0.00 0.00 40.23 2.66
3972 5956 8.621286 CCAAAATAAGTGACTCAACTTTACACT 58.379 33.333 0.00 0.00 40.77 3.55
3973 5957 7.860872 CCCAAAATAAGTGACTCAACTTTACAC 59.139 37.037 0.00 0.00 40.77 2.90
3974 5958 7.776030 TCCCAAAATAAGTGACTCAACTTTACA 59.224 33.333 0.00 0.00 40.77 2.41
3975 5959 8.074370 GTCCCAAAATAAGTGACTCAACTTTAC 58.926 37.037 0.00 0.00 40.77 2.01
3976 5960 7.041644 CGTCCCAAAATAAGTGACTCAACTTTA 60.042 37.037 0.00 0.00 40.77 1.85
3977 5961 6.238648 CGTCCCAAAATAAGTGACTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
3978 5962 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3979 5963 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3980 5964 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3981 5965 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3982 5966 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
3983 5967 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
3984 5968 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3985 5969 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
3986 5970 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
3987 5971 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3988 5972 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3989 5973 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3990 5974 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3991 5975 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3992 5976 1.004394 GAACTCCCTCCGTCCCAAAAT 59.996 52.381 0.00 0.00 0.00 1.82
3993 5977 0.399075 GAACTCCCTCCGTCCCAAAA 59.601 55.000 0.00 0.00 0.00 2.44
3994 5978 0.473117 AGAACTCCCTCCGTCCCAAA 60.473 55.000 0.00 0.00 0.00 3.28
3995 5979 0.903454 GAGAACTCCCTCCGTCCCAA 60.903 60.000 0.00 0.00 0.00 4.12
3996 5980 1.305046 GAGAACTCCCTCCGTCCCA 60.305 63.158 0.00 0.00 0.00 4.37
3997 5981 0.258194 TAGAGAACTCCCTCCGTCCC 59.742 60.000 0.00 0.00 33.76 4.46
3998 5982 1.212441 TCTAGAGAACTCCCTCCGTCC 59.788 57.143 0.00 0.00 33.76 4.79
3999 5983 2.713863 TCTAGAGAACTCCCTCCGTC 57.286 55.000 0.00 0.00 33.76 4.79
4000 5984 3.453059 TTTCTAGAGAACTCCCTCCGT 57.547 47.619 0.00 0.00 33.13 4.69
4001 5985 4.211920 AGATTTCTAGAGAACTCCCTCCG 58.788 47.826 6.13 0.00 35.20 4.63
4002 5986 5.454966 AGAGATTTCTAGAGAACTCCCTCC 58.545 45.833 14.61 0.00 35.20 4.30
4003 5987 6.489022 GGTAGAGATTTCTAGAGAACTCCCTC 59.511 46.154 14.61 7.44 36.61 4.30
4004 5988 6.370453 GGTAGAGATTTCTAGAGAACTCCCT 58.630 44.000 14.61 3.30 36.61 4.20
4005 5989 6.644248 GGTAGAGATTTCTAGAGAACTCCC 57.356 45.833 14.61 8.02 36.61 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.