Multiple sequence alignment - TraesCS7A01G031600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G031600 chr7A 100.000 3397 0 0 1 3397 13134034 13130638 0.000000e+00 6274
1 TraesCS7A01G031600 chr7A 99.009 2825 26 2 574 3397 707670446 707673269 0.000000e+00 5060
2 TraesCS7A01G031600 chr7A 82.018 456 57 15 66 498 13125169 13124716 6.930000e-97 364
3 TraesCS7A01G031600 chr5A 99.326 2820 18 1 579 3397 44279440 44276621 0.000000e+00 5101
4 TraesCS7A01G031600 chrUn 99.114 2821 23 2 579 3397 8808795 8805975 0.000000e+00 5070
5 TraesCS7A01G031600 chr7B 99.007 2820 24 4 579 3397 714452956 714450140 0.000000e+00 5049
6 TraesCS7A01G031600 chr3B 98.936 2820 23 2 579 3397 60270841 60273654 0.000000e+00 5035
7 TraesCS7A01G031600 chr2A 98.582 2820 33 3 579 3397 734935070 734932257 0.000000e+00 4979
8 TraesCS7A01G031600 chr2A 97.629 2826 53 7 577 3397 2768051 2765235 0.000000e+00 4835
9 TraesCS7A01G031600 chr2A 88.344 1793 133 39 1661 3397 38527852 38526080 0.000000e+00 2084
10 TraesCS7A01G031600 chr6B 97.910 2823 46 6 579 3397 704743237 704746050 0.000000e+00 4874
11 TraesCS7A01G031600 chr4B 97.553 2820 35 7 579 3397 621762622 621759836 0.000000e+00 4795
12 TraesCS7A01G031600 chr3A 87.126 668 49 16 2757 3397 674546809 674546152 0.000000e+00 723
13 TraesCS7A01G031600 chr7D 95.926 270 10 1 1 269 13670542 13670273 1.450000e-118 436
14 TraesCS7A01G031600 chr7D 92.713 247 14 4 333 578 13670273 13670030 1.500000e-93 353


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G031600 chr7A 13130638 13134034 3396 True 6274.0 6274 100.0000 1 3397 1 chr7A.!!$R2 3396
1 TraesCS7A01G031600 chr7A 707670446 707673269 2823 False 5060.0 5060 99.0090 574 3397 1 chr7A.!!$F1 2823
2 TraesCS7A01G031600 chr5A 44276621 44279440 2819 True 5101.0 5101 99.3260 579 3397 1 chr5A.!!$R1 2818
3 TraesCS7A01G031600 chrUn 8805975 8808795 2820 True 5070.0 5070 99.1140 579 3397 1 chrUn.!!$R1 2818
4 TraesCS7A01G031600 chr7B 714450140 714452956 2816 True 5049.0 5049 99.0070 579 3397 1 chr7B.!!$R1 2818
5 TraesCS7A01G031600 chr3B 60270841 60273654 2813 False 5035.0 5035 98.9360 579 3397 1 chr3B.!!$F1 2818
6 TraesCS7A01G031600 chr2A 734932257 734935070 2813 True 4979.0 4979 98.5820 579 3397 1 chr2A.!!$R3 2818
7 TraesCS7A01G031600 chr2A 2765235 2768051 2816 True 4835.0 4835 97.6290 577 3397 1 chr2A.!!$R1 2820
8 TraesCS7A01G031600 chr2A 38526080 38527852 1772 True 2084.0 2084 88.3440 1661 3397 1 chr2A.!!$R2 1736
9 TraesCS7A01G031600 chr6B 704743237 704746050 2813 False 4874.0 4874 97.9100 579 3397 1 chr6B.!!$F1 2818
10 TraesCS7A01G031600 chr4B 621759836 621762622 2786 True 4795.0 4795 97.5530 579 3397 1 chr4B.!!$R1 2818
11 TraesCS7A01G031600 chr3A 674546152 674546809 657 True 723.0 723 87.1260 2757 3397 1 chr3A.!!$R1 640
12 TraesCS7A01G031600 chr7D 13670030 13670542 512 True 394.5 436 94.3195 1 578 2 chr7D.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
325 326 0.035056 CTCCTCCCACCAATCACCAC 60.035 60.0 0.0 0.0 0.00 4.16 F
361 362 0.320247 CACAGCTCACCTGACCAGTC 60.320 60.0 0.0 0.0 44.64 3.51 F
387 388 0.535335 TCCTGGCCACACGTAAGATC 59.465 55.0 0.0 0.0 43.62 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1224 1226 2.202932 ATCATGCACGTCGGCTCC 60.203 61.111 0.00 0.0 34.04 4.70 R
1598 1630 7.825270 TCTGTTCTTTTTCAGTTAACACCTACA 59.175 33.333 8.61 0.0 33.89 2.74 R
2866 2990 4.684484 AGTTCCTAGGTTCAGTTTCGTT 57.316 40.909 9.08 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.012374 CGTAGTCCCTCCGCCTTAATATA 58.988 47.826 0.00 0.00 0.00 0.86
45 46 3.057736 TCCGCCTTAATATACAGAGCGTC 60.058 47.826 0.00 0.00 40.43 5.19
56 57 0.368227 CAGAGCGTCGTTTCATCTGC 59.632 55.000 0.00 0.00 31.83 4.26
99 100 6.072112 ACAATTACTTTGTTCATTCACGCT 57.928 33.333 0.00 0.00 46.51 5.07
100 101 6.503524 ACAATTACTTTGTTCATTCACGCTT 58.496 32.000 0.00 0.00 46.51 4.68
101 102 6.978080 ACAATTACTTTGTTCATTCACGCTTT 59.022 30.769 0.00 0.00 46.51 3.51
102 103 7.167468 ACAATTACTTTGTTCATTCACGCTTTC 59.833 33.333 0.00 0.00 46.51 2.62
103 104 3.964909 ACTTTGTTCATTCACGCTTTCC 58.035 40.909 0.00 0.00 0.00 3.13
104 105 3.380004 ACTTTGTTCATTCACGCTTTCCA 59.620 39.130 0.00 0.00 0.00 3.53
105 106 4.037923 ACTTTGTTCATTCACGCTTTCCAT 59.962 37.500 0.00 0.00 0.00 3.41
106 107 3.557577 TGTTCATTCACGCTTTCCATG 57.442 42.857 0.00 0.00 0.00 3.66
107 108 3.145286 TGTTCATTCACGCTTTCCATGA 58.855 40.909 0.00 0.00 0.00 3.07
108 109 3.758023 TGTTCATTCACGCTTTCCATGAT 59.242 39.130 0.00 0.00 0.00 2.45
109 110 4.940654 TGTTCATTCACGCTTTCCATGATA 59.059 37.500 0.00 0.00 0.00 2.15
110 111 5.163764 TGTTCATTCACGCTTTCCATGATAC 60.164 40.000 0.00 0.00 0.00 2.24
111 112 4.512484 TCATTCACGCTTTCCATGATACA 58.488 39.130 0.00 0.00 0.00 2.29
112 113 4.940654 TCATTCACGCTTTCCATGATACAA 59.059 37.500 0.00 0.00 0.00 2.41
113 114 5.414144 TCATTCACGCTTTCCATGATACAAA 59.586 36.000 0.00 0.00 0.00 2.83
114 115 4.678509 TCACGCTTTCCATGATACAAAC 57.321 40.909 0.00 0.00 0.00 2.93
115 116 4.323417 TCACGCTTTCCATGATACAAACT 58.677 39.130 0.00 0.00 0.00 2.66
116 117 5.483811 TCACGCTTTCCATGATACAAACTA 58.516 37.500 0.00 0.00 0.00 2.24
117 118 6.112734 TCACGCTTTCCATGATACAAACTAT 58.887 36.000 0.00 0.00 0.00 2.12
118 119 7.269316 TCACGCTTTCCATGATACAAACTATA 58.731 34.615 0.00 0.00 0.00 1.31
119 120 7.931407 TCACGCTTTCCATGATACAAACTATAT 59.069 33.333 0.00 0.00 0.00 0.86
120 121 9.203421 CACGCTTTCCATGATACAAACTATATA 57.797 33.333 0.00 0.00 0.00 0.86
121 122 9.772973 ACGCTTTCCATGATACAAACTATATAA 57.227 29.630 0.00 0.00 0.00 0.98
145 146 8.856490 AATATTATCGCTGGATTTGTGTTTTC 57.144 30.769 0.00 0.00 34.00 2.29
146 147 5.957842 TTATCGCTGGATTTGTGTTTTCT 57.042 34.783 0.00 0.00 34.00 2.52
147 148 3.624326 TCGCTGGATTTGTGTTTTCTG 57.376 42.857 0.00 0.00 0.00 3.02
148 149 2.948979 TCGCTGGATTTGTGTTTTCTGT 59.051 40.909 0.00 0.00 0.00 3.41
149 150 3.380004 TCGCTGGATTTGTGTTTTCTGTT 59.620 39.130 0.00 0.00 0.00 3.16
150 151 4.111916 CGCTGGATTTGTGTTTTCTGTTT 58.888 39.130 0.00 0.00 0.00 2.83
151 152 4.207019 CGCTGGATTTGTGTTTTCTGTTTC 59.793 41.667 0.00 0.00 0.00 2.78
152 153 5.351458 GCTGGATTTGTGTTTTCTGTTTCT 58.649 37.500 0.00 0.00 0.00 2.52
153 154 5.812127 GCTGGATTTGTGTTTTCTGTTTCTT 59.188 36.000 0.00 0.00 0.00 2.52
154 155 6.019559 GCTGGATTTGTGTTTTCTGTTTCTTC 60.020 38.462 0.00 0.00 0.00 2.87
155 156 6.929625 TGGATTTGTGTTTTCTGTTTCTTCA 58.070 32.000 0.00 0.00 0.00 3.02
156 157 7.035004 TGGATTTGTGTTTTCTGTTTCTTCAG 58.965 34.615 0.00 0.00 36.85 3.02
157 158 7.093988 TGGATTTGTGTTTTCTGTTTCTTCAGA 60.094 33.333 0.00 0.00 41.85 3.27
158 159 7.220875 GGATTTGTGTTTTCTGTTTCTTCAGAC 59.779 37.037 0.00 0.00 43.01 3.51
159 160 6.567687 TTGTGTTTTCTGTTTCTTCAGACA 57.432 33.333 0.00 0.00 43.01 3.41
160 161 6.567687 TGTGTTTTCTGTTTCTTCAGACAA 57.432 33.333 0.00 0.00 43.01 3.18
161 162 6.976088 TGTGTTTTCTGTTTCTTCAGACAAA 58.024 32.000 0.00 0.00 43.01 2.83
162 163 7.083858 TGTGTTTTCTGTTTCTTCAGACAAAG 58.916 34.615 0.00 0.00 43.01 2.77
163 164 6.528072 GTGTTTTCTGTTTCTTCAGACAAAGG 59.472 38.462 0.00 0.00 43.01 3.11
164 165 6.432783 TGTTTTCTGTTTCTTCAGACAAAGGA 59.567 34.615 0.00 0.00 43.01 3.36
165 166 6.436843 TTTCTGTTTCTTCAGACAAAGGAC 57.563 37.500 0.00 0.00 43.01 3.85
166 167 4.451900 TCTGTTTCTTCAGACAAAGGACC 58.548 43.478 0.00 0.00 39.20 4.46
167 168 3.202906 TGTTTCTTCAGACAAAGGACCG 58.797 45.455 0.00 0.00 0.00 4.79
168 169 3.118555 TGTTTCTTCAGACAAAGGACCGA 60.119 43.478 0.00 0.00 0.00 4.69
169 170 4.065789 GTTTCTTCAGACAAAGGACCGAT 58.934 43.478 0.00 0.00 0.00 4.18
170 171 4.351874 TTCTTCAGACAAAGGACCGATT 57.648 40.909 0.00 0.00 0.00 3.34
171 172 5.477607 TTCTTCAGACAAAGGACCGATTA 57.522 39.130 0.00 0.00 0.00 1.75
172 173 5.677319 TCTTCAGACAAAGGACCGATTAT 57.323 39.130 0.00 0.00 0.00 1.28
173 174 5.661458 TCTTCAGACAAAGGACCGATTATC 58.339 41.667 0.00 0.00 0.00 1.75
174 175 4.041740 TCAGACAAAGGACCGATTATCG 57.958 45.455 7.74 7.74 40.07 2.92
175 176 3.697542 TCAGACAAAGGACCGATTATCGA 59.302 43.478 16.78 0.00 43.74 3.59
176 177 4.158949 TCAGACAAAGGACCGATTATCGAA 59.841 41.667 16.78 0.00 43.74 3.71
177 178 5.050490 CAGACAAAGGACCGATTATCGAAT 58.950 41.667 16.78 3.53 43.74 3.34
178 179 5.523916 CAGACAAAGGACCGATTATCGAATT 59.476 40.000 16.78 0.00 43.74 2.17
179 180 6.037172 CAGACAAAGGACCGATTATCGAATTT 59.963 38.462 16.78 8.06 43.74 1.82
180 181 7.223971 CAGACAAAGGACCGATTATCGAATTTA 59.776 37.037 16.78 0.00 43.74 1.40
181 182 7.224167 AGACAAAGGACCGATTATCGAATTTAC 59.776 37.037 16.78 8.36 43.74 2.01
182 183 6.019318 ACAAAGGACCGATTATCGAATTTACG 60.019 38.462 16.78 0.00 43.74 3.18
183 184 4.553323 AGGACCGATTATCGAATTTACGG 58.447 43.478 16.78 15.77 43.74 4.02
184 185 3.122445 GGACCGATTATCGAATTTACGGC 59.878 47.826 16.78 0.00 43.74 5.68
185 186 3.719924 ACCGATTATCGAATTTACGGCA 58.280 40.909 16.78 0.00 43.74 5.69
186 187 3.492011 ACCGATTATCGAATTTACGGCAC 59.508 43.478 16.78 0.00 43.74 5.01
187 188 3.491639 CCGATTATCGAATTTACGGCACA 59.508 43.478 16.78 0.00 43.74 4.57
188 189 4.025563 CCGATTATCGAATTTACGGCACAA 60.026 41.667 16.78 0.00 43.74 3.33
189 190 4.896238 CGATTATCGAATTTACGGCACAAC 59.104 41.667 9.20 0.00 43.74 3.32
190 191 4.603231 TTATCGAATTTACGGCACAACC 57.397 40.909 0.00 0.00 0.00 3.77
199 200 3.808036 GGCACAACCGACGCATAT 58.192 55.556 0.00 0.00 0.00 1.78
200 201 1.641677 GGCACAACCGACGCATATC 59.358 57.895 0.00 0.00 0.00 1.63
201 202 1.087202 GGCACAACCGACGCATATCA 61.087 55.000 0.00 0.00 0.00 2.15
202 203 0.937304 GCACAACCGACGCATATCAT 59.063 50.000 0.00 0.00 0.00 2.45
203 204 1.333169 GCACAACCGACGCATATCATG 60.333 52.381 0.00 0.00 0.00 3.07
204 205 1.933181 CACAACCGACGCATATCATGT 59.067 47.619 0.00 0.00 0.00 3.21
205 206 2.033747 CACAACCGACGCATATCATGTC 60.034 50.000 0.00 0.00 0.00 3.06
206 207 2.200899 CAACCGACGCATATCATGTCA 58.799 47.619 0.00 0.00 32.91 3.58
207 208 2.802247 CAACCGACGCATATCATGTCAT 59.198 45.455 0.00 0.00 32.91 3.06
208 209 3.111853 ACCGACGCATATCATGTCATT 57.888 42.857 0.00 0.00 32.91 2.57
209 210 2.802247 ACCGACGCATATCATGTCATTG 59.198 45.455 0.00 0.00 32.91 2.82
210 211 2.802247 CCGACGCATATCATGTCATTGT 59.198 45.455 0.00 0.00 32.91 2.71
211 212 3.120889 CCGACGCATATCATGTCATTGTC 60.121 47.826 0.00 0.00 32.91 3.18
212 213 3.490526 CGACGCATATCATGTCATTGTCA 59.509 43.478 0.00 0.00 32.91 3.58
213 214 4.151157 CGACGCATATCATGTCATTGTCAT 59.849 41.667 0.00 0.00 32.91 3.06
214 215 5.333568 CGACGCATATCATGTCATTGTCATT 60.334 40.000 0.00 0.00 32.91 2.57
215 216 5.754778 ACGCATATCATGTCATTGTCATTG 58.245 37.500 0.00 0.00 0.00 2.82
216 217 5.528320 ACGCATATCATGTCATTGTCATTGA 59.472 36.000 0.00 0.00 0.00 2.57
217 218 6.206048 ACGCATATCATGTCATTGTCATTGAT 59.794 34.615 0.98 10.78 0.00 2.57
218 219 7.081976 CGCATATCATGTCATTGTCATTGATT 58.918 34.615 0.98 0.00 0.00 2.57
219 220 7.593644 CGCATATCATGTCATTGTCATTGATTT 59.406 33.333 0.98 4.96 0.00 2.17
220 221 9.256477 GCATATCATGTCATTGTCATTGATTTT 57.744 29.630 0.98 0.00 0.00 1.82
224 225 8.975410 TCATGTCATTGTCATTGATTTTTCTC 57.025 30.769 0.98 0.00 0.00 2.87
225 226 8.578151 TCATGTCATTGTCATTGATTTTTCTCA 58.422 29.630 0.98 0.00 0.00 3.27
226 227 9.366216 CATGTCATTGTCATTGATTTTTCTCAT 57.634 29.630 0.98 0.00 0.00 2.90
227 228 8.751302 TGTCATTGTCATTGATTTTTCTCATG 57.249 30.769 0.98 0.00 0.00 3.07
228 229 8.578151 TGTCATTGTCATTGATTTTTCTCATGA 58.422 29.630 0.00 0.00 0.00 3.07
229 230 8.857216 GTCATTGTCATTGATTTTTCTCATGAC 58.143 33.333 0.00 4.04 35.97 3.06
230 231 8.799367 TCATTGTCATTGATTTTTCTCATGACT 58.201 29.630 10.93 0.00 36.16 3.41
231 232 9.419297 CATTGTCATTGATTTTTCTCATGACTT 57.581 29.630 10.93 0.00 36.16 3.01
232 233 9.991906 ATTGTCATTGATTTTTCTCATGACTTT 57.008 25.926 10.93 0.00 36.16 2.66
233 234 9.820725 TTGTCATTGATTTTTCTCATGACTTTT 57.179 25.926 10.93 0.00 36.16 2.27
236 237 9.630098 TCATTGATTTTTCTCATGACTTTTAGC 57.370 29.630 0.00 0.00 0.00 3.09
237 238 9.414295 CATTGATTTTTCTCATGACTTTTAGCA 57.586 29.630 0.00 0.00 0.00 3.49
238 239 9.635520 ATTGATTTTTCTCATGACTTTTAGCAG 57.364 29.630 0.00 0.00 0.00 4.24
239 240 7.086376 TGATTTTTCTCATGACTTTTAGCAGC 58.914 34.615 0.00 0.00 0.00 5.25
240 241 6.389830 TTTTTCTCATGACTTTTAGCAGCA 57.610 33.333 0.00 0.00 0.00 4.41
241 242 6.579666 TTTTCTCATGACTTTTAGCAGCAT 57.420 33.333 0.00 0.00 0.00 3.79
242 243 6.579666 TTTCTCATGACTTTTAGCAGCATT 57.420 33.333 0.00 0.00 0.00 3.56
243 244 6.579666 TTCTCATGACTTTTAGCAGCATTT 57.420 33.333 0.00 0.00 0.00 2.32
244 245 5.946298 TCTCATGACTTTTAGCAGCATTTG 58.054 37.500 0.00 0.00 0.00 2.32
245 246 5.063180 TCATGACTTTTAGCAGCATTTGG 57.937 39.130 0.00 0.00 0.00 3.28
246 247 4.766373 TCATGACTTTTAGCAGCATTTGGA 59.234 37.500 0.00 0.00 0.00 3.53
247 248 5.419788 TCATGACTTTTAGCAGCATTTGGAT 59.580 36.000 0.00 0.00 0.00 3.41
248 249 5.063180 TGACTTTTAGCAGCATTTGGATG 57.937 39.130 0.00 0.00 36.32 3.51
249 250 4.766373 TGACTTTTAGCAGCATTTGGATGA 59.234 37.500 0.00 0.00 33.82 2.92
250 251 5.106038 TGACTTTTAGCAGCATTTGGATGAG 60.106 40.000 0.00 0.00 33.82 2.90
251 252 3.788333 TTTAGCAGCATTTGGATGAGC 57.212 42.857 0.00 0.00 33.82 4.26
252 253 1.683943 TAGCAGCATTTGGATGAGCC 58.316 50.000 0.00 0.00 36.86 4.70
280 281 7.790823 AAAACGTAAATACACACCAAGTACT 57.209 32.000 0.00 0.00 0.00 2.73
281 282 7.790823 AAACGTAAATACACACCAAGTACTT 57.209 32.000 1.12 1.12 0.00 2.24
282 283 7.412137 AACGTAAATACACACCAAGTACTTC 57.588 36.000 4.77 0.00 0.00 3.01
283 284 6.514947 ACGTAAATACACACCAAGTACTTCA 58.485 36.000 4.77 0.00 0.00 3.02
284 285 6.985645 ACGTAAATACACACCAAGTACTTCAA 59.014 34.615 4.77 0.00 0.00 2.69
285 286 7.495279 ACGTAAATACACACCAAGTACTTCAAA 59.505 33.333 4.77 0.00 0.00 2.69
286 287 8.336806 CGTAAATACACACCAAGTACTTCAAAA 58.663 33.333 4.77 0.00 0.00 2.44
289 290 5.514274 ACACACCAAGTACTTCAAAATGG 57.486 39.130 4.77 6.30 0.00 3.16
290 291 4.340950 ACACACCAAGTACTTCAAAATGGG 59.659 41.667 4.77 4.75 32.21 4.00
291 292 4.582656 CACACCAAGTACTTCAAAATGGGA 59.417 41.667 4.77 0.00 32.21 4.37
292 293 4.827284 ACACCAAGTACTTCAAAATGGGAG 59.173 41.667 4.77 3.66 32.21 4.30
293 294 3.826729 ACCAAGTACTTCAAAATGGGAGC 59.173 43.478 4.77 0.00 32.21 4.70
294 295 3.826157 CCAAGTACTTCAAAATGGGAGCA 59.174 43.478 4.77 0.00 0.00 4.26
295 296 4.280677 CCAAGTACTTCAAAATGGGAGCAA 59.719 41.667 4.77 0.00 0.00 3.91
296 297 5.047092 CCAAGTACTTCAAAATGGGAGCAAT 60.047 40.000 4.77 0.00 0.00 3.56
297 298 5.649782 AGTACTTCAAAATGGGAGCAATG 57.350 39.130 0.00 0.00 0.00 2.82
298 299 3.967332 ACTTCAAAATGGGAGCAATGG 57.033 42.857 0.00 0.00 0.00 3.16
299 300 3.509442 ACTTCAAAATGGGAGCAATGGA 58.491 40.909 0.00 0.00 0.00 3.41
300 301 4.098894 ACTTCAAAATGGGAGCAATGGAT 58.901 39.130 0.00 0.00 0.00 3.41
301 302 5.271598 ACTTCAAAATGGGAGCAATGGATA 58.728 37.500 0.00 0.00 0.00 2.59
302 303 5.127682 ACTTCAAAATGGGAGCAATGGATAC 59.872 40.000 0.00 0.00 0.00 2.24
316 317 2.408565 TGGATACATTCTCCTCCCACC 58.591 52.381 0.00 0.00 46.17 4.61
317 318 2.293519 TGGATACATTCTCCTCCCACCA 60.294 50.000 0.00 0.00 46.17 4.17
318 319 2.777692 GGATACATTCTCCTCCCACCAA 59.222 50.000 0.00 0.00 0.00 3.67
319 320 3.395941 GGATACATTCTCCTCCCACCAAT 59.604 47.826 0.00 0.00 0.00 3.16
320 321 4.505742 GGATACATTCTCCTCCCACCAATC 60.506 50.000 0.00 0.00 0.00 2.67
321 322 2.278245 ACATTCTCCTCCCACCAATCA 58.722 47.619 0.00 0.00 0.00 2.57
322 323 2.025887 ACATTCTCCTCCCACCAATCAC 60.026 50.000 0.00 0.00 0.00 3.06
323 324 0.991920 TTCTCCTCCCACCAATCACC 59.008 55.000 0.00 0.00 0.00 4.02
324 325 0.178876 TCTCCTCCCACCAATCACCA 60.179 55.000 0.00 0.00 0.00 4.17
325 326 0.035056 CTCCTCCCACCAATCACCAC 60.035 60.000 0.00 0.00 0.00 4.16
326 327 0.770166 TCCTCCCACCAATCACCACA 60.770 55.000 0.00 0.00 0.00 4.17
327 328 0.609131 CCTCCCACCAATCACCACAC 60.609 60.000 0.00 0.00 0.00 3.82
328 329 0.609131 CTCCCACCAATCACCACACC 60.609 60.000 0.00 0.00 0.00 4.16
329 330 1.152599 CCCACCAATCACCACACCA 59.847 57.895 0.00 0.00 0.00 4.17
330 331 0.895100 CCCACCAATCACCACACCAG 60.895 60.000 0.00 0.00 0.00 4.00
331 332 1.526575 CCACCAATCACCACACCAGC 61.527 60.000 0.00 0.00 0.00 4.85
332 333 1.228552 ACCAATCACCACACCAGCC 60.229 57.895 0.00 0.00 0.00 4.85
333 334 1.978617 CCAATCACCACACCAGCCC 60.979 63.158 0.00 0.00 0.00 5.19
334 335 1.228521 CAATCACCACACCAGCCCA 60.229 57.895 0.00 0.00 0.00 5.36
335 336 0.612732 CAATCACCACACCAGCCCAT 60.613 55.000 0.00 0.00 0.00 4.00
336 337 0.323725 AATCACCACACCAGCCCATC 60.324 55.000 0.00 0.00 0.00 3.51
337 338 1.210204 ATCACCACACCAGCCCATCT 61.210 55.000 0.00 0.00 0.00 2.90
338 339 1.676635 CACCACACCAGCCCATCTG 60.677 63.158 0.00 0.00 42.49 2.90
339 340 2.156098 ACCACACCAGCCCATCTGT 61.156 57.895 0.00 0.00 41.25 3.41
340 341 1.075482 CCACACCAGCCCATCTGTT 59.925 57.895 0.00 0.00 41.25 3.16
341 342 1.246056 CCACACCAGCCCATCTGTTG 61.246 60.000 0.00 0.00 40.60 3.33
342 343 1.604593 ACACCAGCCCATCTGTTGC 60.605 57.895 0.00 0.00 38.62 4.17
343 344 1.604308 CACCAGCCCATCTGTTGCA 60.604 57.895 0.00 0.00 41.25 4.08
344 345 1.604593 ACCAGCCCATCTGTTGCAC 60.605 57.895 0.00 0.00 41.25 4.57
345 346 1.604308 CCAGCCCATCTGTTGCACA 60.604 57.895 0.00 0.00 41.25 4.57
347 348 1.975407 AGCCCATCTGTTGCACAGC 60.975 57.895 10.36 1.82 45.54 4.40
348 349 1.975407 GCCCATCTGTTGCACAGCT 60.975 57.895 10.36 0.38 45.54 4.24
349 350 1.930908 GCCCATCTGTTGCACAGCTC 61.931 60.000 10.36 0.00 45.54 4.09
350 351 0.607217 CCCATCTGTTGCACAGCTCA 60.607 55.000 10.36 0.00 45.54 4.26
351 352 0.520404 CCATCTGTTGCACAGCTCAC 59.480 55.000 10.36 0.00 45.54 3.51
352 353 0.520404 CATCTGTTGCACAGCTCACC 59.480 55.000 10.36 0.00 45.54 4.02
353 354 0.399454 ATCTGTTGCACAGCTCACCT 59.601 50.000 10.36 0.00 45.54 4.00
354 355 0.533531 TCTGTTGCACAGCTCACCTG 60.534 55.000 10.36 0.00 45.54 4.00
355 356 0.533531 CTGTTGCACAGCTCACCTGA 60.534 55.000 3.83 0.00 44.64 3.86
356 357 0.815213 TGTTGCACAGCTCACCTGAC 60.815 55.000 0.00 0.00 44.64 3.51
357 358 1.227943 TTGCACAGCTCACCTGACC 60.228 57.895 0.00 0.00 44.64 4.02
358 359 1.981951 TTGCACAGCTCACCTGACCA 61.982 55.000 0.00 0.00 44.64 4.02
359 360 1.670406 GCACAGCTCACCTGACCAG 60.670 63.158 0.00 0.00 44.64 4.00
360 361 1.750930 CACAGCTCACCTGACCAGT 59.249 57.895 0.00 0.00 44.64 4.00
361 362 0.320247 CACAGCTCACCTGACCAGTC 60.320 60.000 0.00 0.00 44.64 3.51
362 363 0.760567 ACAGCTCACCTGACCAGTCA 60.761 55.000 0.00 0.00 44.64 3.41
363 364 0.612229 CAGCTCACCTGACCAGTCAT 59.388 55.000 0.04 0.00 44.64 3.06
364 365 0.901124 AGCTCACCTGACCAGTCATC 59.099 55.000 0.04 0.00 39.13 2.92
365 366 0.610174 GCTCACCTGACCAGTCATCA 59.390 55.000 0.04 0.00 39.13 3.07
366 367 1.674221 GCTCACCTGACCAGTCATCAC 60.674 57.143 0.04 0.00 39.13 3.06
367 368 0.976641 TCACCTGACCAGTCATCACC 59.023 55.000 0.04 0.00 39.13 4.02
368 369 0.979665 CACCTGACCAGTCATCACCT 59.020 55.000 0.04 0.00 39.13 4.00
369 370 1.066573 CACCTGACCAGTCATCACCTC 60.067 57.143 0.04 0.00 39.13 3.85
370 371 0.539051 CCTGACCAGTCATCACCTCC 59.461 60.000 0.04 0.00 39.13 4.30
371 372 1.566211 CTGACCAGTCATCACCTCCT 58.434 55.000 0.04 0.00 39.13 3.69
372 373 1.206610 CTGACCAGTCATCACCTCCTG 59.793 57.143 0.04 0.00 39.13 3.86
374 375 1.222936 CCAGTCATCACCTCCTGGC 59.777 63.158 0.00 0.00 38.19 4.85
375 376 1.222936 CAGTCATCACCTCCTGGCC 59.777 63.158 0.00 0.00 36.63 5.36
376 377 1.229625 AGTCATCACCTCCTGGCCA 60.230 57.895 4.71 4.71 36.63 5.36
377 378 1.078143 GTCATCACCTCCTGGCCAC 60.078 63.158 0.00 0.00 36.63 5.01
378 379 1.538629 TCATCACCTCCTGGCCACA 60.539 57.895 0.00 0.00 36.63 4.17
379 380 1.377725 CATCACCTCCTGGCCACAC 60.378 63.158 0.00 0.00 36.63 3.82
380 381 2.959484 ATCACCTCCTGGCCACACG 61.959 63.158 0.00 0.00 36.63 4.49
381 382 3.941188 CACCTCCTGGCCACACGT 61.941 66.667 0.00 0.00 36.63 4.49
382 383 2.203728 ACCTCCTGGCCACACGTA 60.204 61.111 0.00 0.00 36.63 3.57
383 384 1.839747 ACCTCCTGGCCACACGTAA 60.840 57.895 0.00 0.00 36.63 3.18
384 385 1.827399 ACCTCCTGGCCACACGTAAG 61.827 60.000 0.00 0.00 39.71 2.34
385 386 1.541310 CCTCCTGGCCACACGTAAGA 61.541 60.000 0.00 0.00 43.62 2.10
386 387 0.537188 CTCCTGGCCACACGTAAGAT 59.463 55.000 0.00 0.00 43.62 2.40
387 388 0.535335 TCCTGGCCACACGTAAGATC 59.465 55.000 0.00 0.00 43.62 2.75
388 389 0.537188 CCTGGCCACACGTAAGATCT 59.463 55.000 0.00 0.00 43.62 2.75
389 390 1.066143 CCTGGCCACACGTAAGATCTT 60.066 52.381 13.56 13.56 43.62 2.40
390 391 2.167693 CCTGGCCACACGTAAGATCTTA 59.832 50.000 11.24 11.24 43.62 2.10
391 392 3.187700 CTGGCCACACGTAAGATCTTAC 58.812 50.000 28.53 28.53 41.37 2.34
392 393 2.829720 TGGCCACACGTAAGATCTTACT 59.170 45.455 32.48 21.29 42.31 2.24
393 394 3.119245 TGGCCACACGTAAGATCTTACTC 60.119 47.826 32.48 15.79 42.31 2.59
394 395 3.119245 GGCCACACGTAAGATCTTACTCA 60.119 47.826 32.48 7.70 42.31 3.41
395 396 4.106197 GCCACACGTAAGATCTTACTCAG 58.894 47.826 32.48 25.27 42.31 3.35
396 397 4.380655 GCCACACGTAAGATCTTACTCAGT 60.381 45.833 32.48 25.75 42.31 3.41
397 398 5.333513 CCACACGTAAGATCTTACTCAGTC 58.666 45.833 32.48 13.99 42.31 3.51
398 399 5.333513 CACACGTAAGATCTTACTCAGTCC 58.666 45.833 32.48 13.39 42.31 3.85
399 400 5.008331 ACACGTAAGATCTTACTCAGTCCA 58.992 41.667 32.48 4.60 42.31 4.02
400 401 5.475909 ACACGTAAGATCTTACTCAGTCCAA 59.524 40.000 32.48 3.91 42.31 3.53
401 402 5.800941 CACGTAAGATCTTACTCAGTCCAAC 59.199 44.000 32.48 13.74 42.31 3.77
402 403 5.029014 CGTAAGATCTTACTCAGTCCAACG 58.971 45.833 32.48 20.02 42.31 4.10
403 404 5.391736 CGTAAGATCTTACTCAGTCCAACGT 60.392 44.000 32.48 1.43 42.31 3.99
404 405 4.442375 AGATCTTACTCAGTCCAACGTG 57.558 45.455 0.00 0.00 0.00 4.49
405 406 3.827302 AGATCTTACTCAGTCCAACGTGT 59.173 43.478 0.00 0.00 0.00 4.49
406 407 4.281182 AGATCTTACTCAGTCCAACGTGTT 59.719 41.667 0.00 0.00 0.00 3.32
407 408 3.973657 TCTTACTCAGTCCAACGTGTTC 58.026 45.455 0.00 0.00 0.00 3.18
408 409 3.382227 TCTTACTCAGTCCAACGTGTTCA 59.618 43.478 0.00 0.00 0.00 3.18
409 410 1.935933 ACTCAGTCCAACGTGTTCAC 58.064 50.000 0.00 0.00 0.00 3.18
410 411 1.206132 ACTCAGTCCAACGTGTTCACA 59.794 47.619 0.00 0.00 0.00 3.58
411 412 1.593006 CTCAGTCCAACGTGTTCACAC 59.407 52.381 0.00 0.00 43.15 3.82
412 413 1.066787 TCAGTCCAACGTGTTCACACA 60.067 47.619 10.61 0.00 46.75 3.72
413 414 1.939934 CAGTCCAACGTGTTCACACAT 59.060 47.619 10.61 0.00 46.75 3.21
414 415 2.354510 CAGTCCAACGTGTTCACACATT 59.645 45.455 10.61 0.00 46.75 2.71
415 416 3.558006 CAGTCCAACGTGTTCACACATTA 59.442 43.478 10.61 0.00 46.75 1.90
416 417 4.034626 CAGTCCAACGTGTTCACACATTAA 59.965 41.667 10.61 0.00 46.75 1.40
417 418 4.034742 AGTCCAACGTGTTCACACATTAAC 59.965 41.667 10.61 3.79 46.75 2.01
418 419 3.939592 TCCAACGTGTTCACACATTAACA 59.060 39.130 10.61 0.00 46.75 2.41
419 420 4.576873 TCCAACGTGTTCACACATTAACAT 59.423 37.500 10.61 0.00 46.75 2.71
420 421 5.758784 TCCAACGTGTTCACACATTAACATA 59.241 36.000 10.61 0.00 46.75 2.29
421 422 6.428465 TCCAACGTGTTCACACATTAACATAT 59.572 34.615 10.61 0.00 46.75 1.78
422 423 7.603024 TCCAACGTGTTCACACATTAACATATA 59.397 33.333 10.61 0.00 46.75 0.86
423 424 8.231161 CCAACGTGTTCACACATTAACATATAA 58.769 33.333 10.61 0.00 46.75 0.98
424 425 9.261318 CAACGTGTTCACACATTAACATATAAG 57.739 33.333 10.61 0.00 46.75 1.73
425 426 8.766000 ACGTGTTCACACATTAACATATAAGA 57.234 30.769 10.61 0.00 46.75 2.10
426 427 8.653338 ACGTGTTCACACATTAACATATAAGAC 58.347 33.333 10.61 0.00 46.75 3.01
427 428 8.114290 CGTGTTCACACATTAACATATAAGACC 58.886 37.037 10.61 0.00 46.75 3.85
428 429 8.395633 GTGTTCACACATTAACATATAAGACCC 58.604 37.037 5.16 0.00 45.75 4.46
429 430 7.554835 TGTTCACACATTAACATATAAGACCCC 59.445 37.037 0.00 0.00 30.88 4.95
430 431 7.201702 TCACACATTAACATATAAGACCCCA 57.798 36.000 0.00 0.00 0.00 4.96
431 432 7.051623 TCACACATTAACATATAAGACCCCAC 58.948 38.462 0.00 0.00 0.00 4.61
432 433 7.054124 CACACATTAACATATAAGACCCCACT 58.946 38.462 0.00 0.00 0.00 4.00
433 434 8.208224 CACACATTAACATATAAGACCCCACTA 58.792 37.037 0.00 0.00 0.00 2.74
434 435 8.429641 ACACATTAACATATAAGACCCCACTAG 58.570 37.037 0.00 0.00 0.00 2.57
435 436 8.429641 CACATTAACATATAAGACCCCACTAGT 58.570 37.037 0.00 0.00 0.00 2.57
436 437 8.648693 ACATTAACATATAAGACCCCACTAGTC 58.351 37.037 0.00 0.00 34.31 2.59
437 438 7.607615 TTAACATATAAGACCCCACTAGTCC 57.392 40.000 0.00 0.00 34.67 3.85
438 439 4.150359 ACATATAAGACCCCACTAGTCCG 58.850 47.826 0.00 0.00 34.67 4.79
439 440 4.141088 ACATATAAGACCCCACTAGTCCGA 60.141 45.833 0.00 0.00 34.67 4.55
440 441 3.614568 ATAAGACCCCACTAGTCCGAT 57.385 47.619 0.00 0.00 34.67 4.18
441 442 2.249309 AAGACCCCACTAGTCCGATT 57.751 50.000 0.00 0.00 34.67 3.34
442 443 1.486211 AGACCCCACTAGTCCGATTG 58.514 55.000 0.00 0.00 34.67 2.67
443 444 1.006758 AGACCCCACTAGTCCGATTGA 59.993 52.381 0.00 0.00 34.67 2.57
444 445 2.040178 GACCCCACTAGTCCGATTGAT 58.960 52.381 0.00 0.00 0.00 2.57
445 446 2.434702 GACCCCACTAGTCCGATTGATT 59.565 50.000 0.00 0.00 0.00 2.57
446 447 3.640029 GACCCCACTAGTCCGATTGATTA 59.360 47.826 0.00 0.00 0.00 1.75
447 448 4.035112 ACCCCACTAGTCCGATTGATTAA 58.965 43.478 0.00 0.00 0.00 1.40
448 449 4.141779 ACCCCACTAGTCCGATTGATTAAC 60.142 45.833 0.00 0.00 0.00 2.01
449 450 4.101119 CCCCACTAGTCCGATTGATTAACT 59.899 45.833 0.00 0.00 0.00 2.24
450 451 5.303589 CCCCACTAGTCCGATTGATTAACTA 59.696 44.000 0.00 0.00 0.00 2.24
451 452 6.214399 CCCACTAGTCCGATTGATTAACTAC 58.786 44.000 0.00 0.00 0.00 2.73
452 453 6.214399 CCACTAGTCCGATTGATTAACTACC 58.786 44.000 0.00 0.00 0.00 3.18
453 454 6.040616 CCACTAGTCCGATTGATTAACTACCT 59.959 42.308 0.00 0.00 0.00 3.08
454 455 7.417570 CCACTAGTCCGATTGATTAACTACCTT 60.418 40.741 0.00 0.00 0.00 3.50
455 456 7.980099 CACTAGTCCGATTGATTAACTACCTTT 59.020 37.037 0.00 0.00 0.00 3.11
456 457 8.537858 ACTAGTCCGATTGATTAACTACCTTTT 58.462 33.333 0.00 0.00 0.00 2.27
457 458 9.379791 CTAGTCCGATTGATTAACTACCTTTTT 57.620 33.333 0.00 0.00 0.00 1.94
459 460 9.729281 AGTCCGATTGATTAACTACCTTTTTAA 57.271 29.630 0.00 0.00 0.00 1.52
484 485 8.753497 ATACCAAACTATTTTCTCCCATTCTC 57.247 34.615 0.00 0.00 0.00 2.87
485 486 6.552008 ACCAAACTATTTTCTCCCATTCTCA 58.448 36.000 0.00 0.00 0.00 3.27
486 487 7.184862 ACCAAACTATTTTCTCCCATTCTCAT 58.815 34.615 0.00 0.00 0.00 2.90
487 488 7.340487 ACCAAACTATTTTCTCCCATTCTCATC 59.660 37.037 0.00 0.00 0.00 2.92
488 489 7.201857 CCAAACTATTTTCTCCCATTCTCATCC 60.202 40.741 0.00 0.00 0.00 3.51
489 490 5.946486 ACTATTTTCTCCCATTCTCATCCC 58.054 41.667 0.00 0.00 0.00 3.85
490 491 4.886755 ATTTTCTCCCATTCTCATCCCA 57.113 40.909 0.00 0.00 0.00 4.37
491 492 4.673328 TTTTCTCCCATTCTCATCCCAA 57.327 40.909 0.00 0.00 0.00 4.12
492 493 3.652057 TTCTCCCATTCTCATCCCAAC 57.348 47.619 0.00 0.00 0.00 3.77
493 494 1.846439 TCTCCCATTCTCATCCCAACC 59.154 52.381 0.00 0.00 0.00 3.77
494 495 1.565759 CTCCCATTCTCATCCCAACCA 59.434 52.381 0.00 0.00 0.00 3.67
495 496 2.176364 CTCCCATTCTCATCCCAACCAT 59.824 50.000 0.00 0.00 0.00 3.55
496 497 3.395607 CTCCCATTCTCATCCCAACCATA 59.604 47.826 0.00 0.00 0.00 2.74
497 498 3.989558 TCCCATTCTCATCCCAACCATAT 59.010 43.478 0.00 0.00 0.00 1.78
498 499 4.084287 CCCATTCTCATCCCAACCATATG 58.916 47.826 0.00 0.00 0.00 1.78
499 500 4.448200 CCCATTCTCATCCCAACCATATGT 60.448 45.833 1.24 0.00 0.00 2.29
500 501 5.222109 CCCATTCTCATCCCAACCATATGTA 60.222 44.000 1.24 0.00 0.00 2.29
501 502 5.707298 CCATTCTCATCCCAACCATATGTAC 59.293 44.000 1.24 0.00 0.00 2.90
502 503 4.974645 TCTCATCCCAACCATATGTACC 57.025 45.455 1.24 0.00 0.00 3.34
503 504 4.302930 TCTCATCCCAACCATATGTACCA 58.697 43.478 1.24 0.00 0.00 3.25
504 505 4.724293 TCTCATCCCAACCATATGTACCAA 59.276 41.667 1.24 0.00 0.00 3.67
505 506 4.787551 TCATCCCAACCATATGTACCAAC 58.212 43.478 1.24 0.00 0.00 3.77
506 507 3.655615 TCCCAACCATATGTACCAACC 57.344 47.619 1.24 0.00 0.00 3.77
507 508 2.092861 TCCCAACCATATGTACCAACCG 60.093 50.000 1.24 0.00 0.00 4.44
508 509 2.092861 CCCAACCATATGTACCAACCGA 60.093 50.000 1.24 0.00 0.00 4.69
509 510 3.611970 CCAACCATATGTACCAACCGAA 58.388 45.455 1.24 0.00 0.00 4.30
510 511 4.204012 CCAACCATATGTACCAACCGAAT 58.796 43.478 1.24 0.00 0.00 3.34
511 512 4.642885 CCAACCATATGTACCAACCGAATT 59.357 41.667 1.24 0.00 0.00 2.17
512 513 5.126384 CCAACCATATGTACCAACCGAATTT 59.874 40.000 1.24 0.00 0.00 1.82
513 514 5.828299 ACCATATGTACCAACCGAATTTG 57.172 39.130 1.24 0.00 0.00 2.32
514 515 5.258051 ACCATATGTACCAACCGAATTTGT 58.742 37.500 1.24 0.00 0.00 2.83
515 516 5.712917 ACCATATGTACCAACCGAATTTGTT 59.287 36.000 1.24 0.00 0.00 2.83
516 517 6.209788 ACCATATGTACCAACCGAATTTGTTT 59.790 34.615 1.24 0.00 0.00 2.83
517 518 7.093992 CCATATGTACCAACCGAATTTGTTTT 58.906 34.615 1.24 0.00 0.00 2.43
518 519 7.274686 CCATATGTACCAACCGAATTTGTTTTC 59.725 37.037 1.24 0.00 0.00 2.29
519 520 5.578005 TGTACCAACCGAATTTGTTTTCA 57.422 34.783 0.00 0.00 0.00 2.69
520 521 6.150396 TGTACCAACCGAATTTGTTTTCAT 57.850 33.333 0.00 0.00 0.00 2.57
521 522 6.574350 TGTACCAACCGAATTTGTTTTCATT 58.426 32.000 0.00 0.00 0.00 2.57
522 523 7.713750 TGTACCAACCGAATTTGTTTTCATTA 58.286 30.769 0.00 0.00 0.00 1.90
523 524 8.361139 TGTACCAACCGAATTTGTTTTCATTAT 58.639 29.630 0.00 0.00 0.00 1.28
524 525 9.843334 GTACCAACCGAATTTGTTTTCATTATA 57.157 29.630 0.00 0.00 0.00 0.98
525 526 8.751302 ACCAACCGAATTTGTTTTCATTATAC 57.249 30.769 0.00 0.00 0.00 1.47
526 527 8.581578 ACCAACCGAATTTGTTTTCATTATACT 58.418 29.630 0.00 0.00 0.00 2.12
535 536 9.783256 ATTTGTTTTCATTATACTAAAGACGGC 57.217 29.630 0.00 0.00 0.00 5.68
536 537 7.908827 TGTTTTCATTATACTAAAGACGGCA 57.091 32.000 0.00 0.00 0.00 5.69
537 538 8.325421 TGTTTTCATTATACTAAAGACGGCAA 57.675 30.769 0.00 0.00 0.00 4.52
538 539 8.952278 TGTTTTCATTATACTAAAGACGGCAAT 58.048 29.630 0.00 0.00 0.00 3.56
539 540 9.783256 GTTTTCATTATACTAAAGACGGCAATT 57.217 29.630 0.00 0.00 0.00 2.32
542 543 9.826574 TTCATTATACTAAAGACGGCAATTAGT 57.173 29.630 19.46 19.46 41.42 2.24
543 544 9.256477 TCATTATACTAAAGACGGCAATTAGTG 57.744 33.333 22.67 10.65 39.51 2.74
544 545 9.042008 CATTATACTAAAGACGGCAATTAGTGT 57.958 33.333 22.67 19.53 39.51 3.55
546 547 9.740239 TTATACTAAAGACGGCAATTAGTGTAG 57.260 33.333 22.67 0.00 39.51 2.74
547 548 6.276832 ACTAAAGACGGCAATTAGTGTAGA 57.723 37.500 16.12 0.00 38.19 2.59
548 549 6.694447 ACTAAAGACGGCAATTAGTGTAGAA 58.306 36.000 16.12 0.00 38.19 2.10
549 550 7.328737 ACTAAAGACGGCAATTAGTGTAGAAT 58.671 34.615 16.12 0.00 38.19 2.40
550 551 6.663944 AAAGACGGCAATTAGTGTAGAATC 57.336 37.500 0.00 0.00 0.00 2.52
551 552 5.339008 AGACGGCAATTAGTGTAGAATCA 57.661 39.130 0.00 0.00 0.00 2.57
552 553 5.918608 AGACGGCAATTAGTGTAGAATCAT 58.081 37.500 0.00 0.00 0.00 2.45
553 554 5.986135 AGACGGCAATTAGTGTAGAATCATC 59.014 40.000 0.00 0.00 0.00 2.92
554 555 5.670485 ACGGCAATTAGTGTAGAATCATCA 58.330 37.500 0.00 0.00 0.00 3.07
555 556 5.755375 ACGGCAATTAGTGTAGAATCATCAG 59.245 40.000 0.00 0.00 0.00 2.90
556 557 5.985530 CGGCAATTAGTGTAGAATCATCAGA 59.014 40.000 0.00 0.00 0.00 3.27
557 558 6.074088 CGGCAATTAGTGTAGAATCATCAGAC 60.074 42.308 0.00 0.00 0.00 3.51
558 559 6.763135 GGCAATTAGTGTAGAATCATCAGACA 59.237 38.462 0.00 0.00 0.00 3.41
559 560 7.254590 GGCAATTAGTGTAGAATCATCAGACAC 60.255 40.741 0.00 0.00 41.46 3.67
560 561 7.278646 GCAATTAGTGTAGAATCATCAGACACA 59.721 37.037 13.18 0.00 42.60 3.72
561 562 9.154847 CAATTAGTGTAGAATCATCAGACACAA 57.845 33.333 13.18 8.07 42.60 3.33
562 563 9.896645 AATTAGTGTAGAATCATCAGACACAAT 57.103 29.630 13.18 9.31 42.60 2.71
563 564 8.932945 TTAGTGTAGAATCATCAGACACAATC 57.067 34.615 13.18 0.00 42.60 2.67
564 565 6.939622 AGTGTAGAATCATCAGACACAATCA 58.060 36.000 13.18 0.00 42.60 2.57
565 566 7.040494 AGTGTAGAATCATCAGACACAATCAG 58.960 38.462 13.18 0.00 42.60 2.90
566 567 6.815641 GTGTAGAATCATCAGACACAATCAGT 59.184 38.462 0.00 0.00 41.11 3.41
567 568 7.976175 GTGTAGAATCATCAGACACAATCAGTA 59.024 37.037 0.00 0.00 41.11 2.74
568 569 8.531146 TGTAGAATCATCAGACACAATCAGTAA 58.469 33.333 0.00 0.00 0.00 2.24
569 570 7.840342 AGAATCATCAGACACAATCAGTAAC 57.160 36.000 0.00 0.00 0.00 2.50
570 571 6.820656 AGAATCATCAGACACAATCAGTAACC 59.179 38.462 0.00 0.00 0.00 2.85
571 572 5.482163 TCATCAGACACAATCAGTAACCA 57.518 39.130 0.00 0.00 0.00 3.67
572 573 5.863965 TCATCAGACACAATCAGTAACCAA 58.136 37.500 0.00 0.00 0.00 3.67
573 574 6.295249 TCATCAGACACAATCAGTAACCAAA 58.705 36.000 0.00 0.00 0.00 3.28
574 575 6.942005 TCATCAGACACAATCAGTAACCAAAT 59.058 34.615 0.00 0.00 0.00 2.32
575 576 6.801539 TCAGACACAATCAGTAACCAAATC 57.198 37.500 0.00 0.00 0.00 2.17
709 711 0.736325 CAACTCGGGAAATCGCTCGT 60.736 55.000 0.00 0.00 0.00 4.18
1224 1226 4.556233 TCTGTGGTTCTTACACTGAATCG 58.444 43.478 0.00 0.00 41.67 3.34
2035 2114 7.397892 TTGATTTCCTGTCAAACAACTACAA 57.602 32.000 0.00 0.00 32.98 2.41
2866 2990 8.882282 AGATGAACTACTAGTAGATAGTGCCTA 58.118 37.037 31.93 10.70 44.69 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.702886 CAGATGAAACGACGCTCTGT 58.297 50.000 0.00 0.00 30.98 3.41
45 46 3.443037 TGTTGTTTTGGCAGATGAAACG 58.557 40.909 7.72 0.00 36.36 3.60
84 85 4.037327 TCATGGAAAGCGTGAATGAACAAA 59.963 37.500 0.00 0.00 0.00 2.83
85 86 3.567585 TCATGGAAAGCGTGAATGAACAA 59.432 39.130 0.00 0.00 0.00 2.83
86 87 3.145286 TCATGGAAAGCGTGAATGAACA 58.855 40.909 0.00 0.00 0.00 3.18
87 88 3.829886 TCATGGAAAGCGTGAATGAAC 57.170 42.857 0.00 0.00 0.00 3.18
88 89 4.940654 TGTATCATGGAAAGCGTGAATGAA 59.059 37.500 0.00 0.00 31.49 2.57
89 90 4.512484 TGTATCATGGAAAGCGTGAATGA 58.488 39.130 0.00 0.00 0.00 2.57
90 91 4.880886 TGTATCATGGAAAGCGTGAATG 57.119 40.909 0.00 0.00 0.00 2.67
91 92 5.415701 AGTTTGTATCATGGAAAGCGTGAAT 59.584 36.000 0.00 0.00 0.00 2.57
92 93 4.759693 AGTTTGTATCATGGAAAGCGTGAA 59.240 37.500 0.00 0.00 0.00 3.18
93 94 4.323417 AGTTTGTATCATGGAAAGCGTGA 58.677 39.130 0.00 0.00 0.00 4.35
94 95 4.685169 AGTTTGTATCATGGAAAGCGTG 57.315 40.909 0.00 0.00 0.00 5.34
95 96 9.772973 TTATATAGTTTGTATCATGGAAAGCGT 57.227 29.630 0.00 0.00 0.00 5.07
119 120 9.944663 GAAAACACAAATCCAGCGATAATATTA 57.055 29.630 0.00 0.00 0.00 0.98
120 121 8.686334 AGAAAACACAAATCCAGCGATAATATT 58.314 29.630 0.00 0.00 0.00 1.28
121 122 8.131100 CAGAAAACACAAATCCAGCGATAATAT 58.869 33.333 0.00 0.00 0.00 1.28
122 123 7.120579 ACAGAAAACACAAATCCAGCGATAATA 59.879 33.333 0.00 0.00 0.00 0.98
123 124 6.071952 ACAGAAAACACAAATCCAGCGATAAT 60.072 34.615 0.00 0.00 0.00 1.28
124 125 5.240623 ACAGAAAACACAAATCCAGCGATAA 59.759 36.000 0.00 0.00 0.00 1.75
125 126 4.759693 ACAGAAAACACAAATCCAGCGATA 59.240 37.500 0.00 0.00 0.00 2.92
126 127 3.569701 ACAGAAAACACAAATCCAGCGAT 59.430 39.130 0.00 0.00 0.00 4.58
127 128 2.948979 ACAGAAAACACAAATCCAGCGA 59.051 40.909 0.00 0.00 0.00 4.93
128 129 3.354089 ACAGAAAACACAAATCCAGCG 57.646 42.857 0.00 0.00 0.00 5.18
129 130 5.351458 AGAAACAGAAAACACAAATCCAGC 58.649 37.500 0.00 0.00 0.00 4.85
130 131 7.035004 TGAAGAAACAGAAAACACAAATCCAG 58.965 34.615 0.00 0.00 0.00 3.86
131 132 6.929625 TGAAGAAACAGAAAACACAAATCCA 58.070 32.000 0.00 0.00 0.00 3.41
132 133 7.220875 GTCTGAAGAAACAGAAAACACAAATCC 59.779 37.037 0.00 0.00 46.34 3.01
133 134 7.754924 TGTCTGAAGAAACAGAAAACACAAATC 59.245 33.333 0.00 0.00 46.34 2.17
134 135 7.601856 TGTCTGAAGAAACAGAAAACACAAAT 58.398 30.769 0.00 0.00 46.34 2.32
135 136 6.976088 TGTCTGAAGAAACAGAAAACACAAA 58.024 32.000 0.00 0.00 46.34 2.83
136 137 6.567687 TGTCTGAAGAAACAGAAAACACAA 57.432 33.333 0.00 0.00 46.34 3.33
137 138 6.567687 TTGTCTGAAGAAACAGAAAACACA 57.432 33.333 0.00 0.00 46.34 3.72
138 139 6.528072 CCTTTGTCTGAAGAAACAGAAAACAC 59.472 38.462 0.00 0.00 46.34 3.32
139 140 6.432783 TCCTTTGTCTGAAGAAACAGAAAACA 59.567 34.615 0.00 0.00 46.34 2.83
140 141 6.747739 GTCCTTTGTCTGAAGAAACAGAAAAC 59.252 38.462 0.00 0.00 46.34 2.43
141 142 6.127730 GGTCCTTTGTCTGAAGAAACAGAAAA 60.128 38.462 0.00 0.00 46.34 2.29
142 143 5.357032 GGTCCTTTGTCTGAAGAAACAGAAA 59.643 40.000 0.00 0.00 46.34 2.52
143 144 4.881850 GGTCCTTTGTCTGAAGAAACAGAA 59.118 41.667 0.00 0.00 46.34 3.02
144 145 4.451900 GGTCCTTTGTCTGAAGAAACAGA 58.548 43.478 0.00 0.00 43.39 3.41
145 146 3.248602 CGGTCCTTTGTCTGAAGAAACAG 59.751 47.826 0.00 0.00 39.02 3.16
146 147 3.118555 TCGGTCCTTTGTCTGAAGAAACA 60.119 43.478 0.00 0.00 0.00 2.83
147 148 3.463944 TCGGTCCTTTGTCTGAAGAAAC 58.536 45.455 0.00 0.00 0.00 2.78
148 149 3.830744 TCGGTCCTTTGTCTGAAGAAA 57.169 42.857 0.00 0.00 0.00 2.52
149 150 4.351874 AATCGGTCCTTTGTCTGAAGAA 57.648 40.909 0.00 0.00 0.00 2.52
150 151 5.661458 GATAATCGGTCCTTTGTCTGAAGA 58.339 41.667 0.00 0.00 0.00 2.87
151 152 4.504461 CGATAATCGGTCCTTTGTCTGAAG 59.496 45.833 0.00 0.00 36.00 3.02
152 153 4.158949 TCGATAATCGGTCCTTTGTCTGAA 59.841 41.667 0.00 0.00 40.88 3.02
153 154 3.697542 TCGATAATCGGTCCTTTGTCTGA 59.302 43.478 0.00 0.00 40.88 3.27
154 155 4.041740 TCGATAATCGGTCCTTTGTCTG 57.958 45.455 0.00 0.00 40.88 3.51
155 156 4.730949 TTCGATAATCGGTCCTTTGTCT 57.269 40.909 0.00 0.00 40.88 3.41
156 157 5.986004 AATTCGATAATCGGTCCTTTGTC 57.014 39.130 0.00 0.00 40.88 3.18
157 158 6.019318 CGTAAATTCGATAATCGGTCCTTTGT 60.019 38.462 0.00 0.00 40.88 2.83
158 159 6.352526 CGTAAATTCGATAATCGGTCCTTTG 58.647 40.000 0.00 0.00 40.88 2.77
159 160 5.464389 CCGTAAATTCGATAATCGGTCCTTT 59.536 40.000 0.00 0.00 40.88 3.11
160 161 4.986659 CCGTAAATTCGATAATCGGTCCTT 59.013 41.667 0.00 0.00 40.88 3.36
161 162 4.553323 CCGTAAATTCGATAATCGGTCCT 58.447 43.478 0.00 0.00 40.88 3.85
162 163 3.122445 GCCGTAAATTCGATAATCGGTCC 59.878 47.826 14.43 0.00 40.88 4.46
163 164 3.737266 TGCCGTAAATTCGATAATCGGTC 59.263 43.478 14.43 9.48 40.88 4.79
164 165 3.492011 GTGCCGTAAATTCGATAATCGGT 59.508 43.478 14.43 0.00 40.88 4.69
165 166 3.491639 TGTGCCGTAAATTCGATAATCGG 59.508 43.478 10.60 10.60 40.88 4.18
166 167 4.702247 TGTGCCGTAAATTCGATAATCG 57.298 40.909 0.00 0.00 42.10 3.34
167 168 5.202640 GGTTGTGCCGTAAATTCGATAATC 58.797 41.667 0.00 0.00 0.00 1.75
168 169 5.164606 GGTTGTGCCGTAAATTCGATAAT 57.835 39.130 0.00 0.00 0.00 1.28
169 170 4.603231 GGTTGTGCCGTAAATTCGATAA 57.397 40.909 0.00 0.00 0.00 1.75
182 183 1.087202 TGATATGCGTCGGTTGTGCC 61.087 55.000 0.00 0.00 0.00 5.01
183 184 0.937304 ATGATATGCGTCGGTTGTGC 59.063 50.000 0.00 0.00 0.00 4.57
184 185 1.933181 ACATGATATGCGTCGGTTGTG 59.067 47.619 0.00 0.00 0.00 3.33
185 186 2.201732 GACATGATATGCGTCGGTTGT 58.798 47.619 0.00 0.00 0.00 3.32
186 187 2.200899 TGACATGATATGCGTCGGTTG 58.799 47.619 0.00 0.00 32.17 3.77
187 188 2.595124 TGACATGATATGCGTCGGTT 57.405 45.000 0.00 0.00 32.17 4.44
188 189 2.802247 CAATGACATGATATGCGTCGGT 59.198 45.455 0.00 0.00 32.17 4.69
189 190 2.802247 ACAATGACATGATATGCGTCGG 59.198 45.455 0.00 0.00 32.17 4.79
190 191 3.490526 TGACAATGACATGATATGCGTCG 59.509 43.478 0.00 0.00 32.17 5.12
191 192 5.602458 ATGACAATGACATGATATGCGTC 57.398 39.130 0.00 5.06 0.00 5.19
192 193 5.528320 TCAATGACAATGACATGATATGCGT 59.472 36.000 0.00 0.00 0.00 5.24
193 194 5.992729 TCAATGACAATGACATGATATGCG 58.007 37.500 0.00 0.00 0.00 4.73
194 195 8.812147 AAATCAATGACAATGACATGATATGC 57.188 30.769 0.00 0.00 0.00 3.14
198 199 9.582431 GAGAAAAATCAATGACAATGACATGAT 57.418 29.630 0.00 2.73 0.00 2.45
199 200 8.578151 TGAGAAAAATCAATGACAATGACATGA 58.422 29.630 0.00 0.60 0.00 3.07
200 201 8.751302 TGAGAAAAATCAATGACAATGACATG 57.249 30.769 0.00 0.00 0.00 3.21
201 202 9.366216 CATGAGAAAAATCAATGACAATGACAT 57.634 29.630 0.00 0.00 31.76 3.06
202 203 8.578151 TCATGAGAAAAATCAATGACAATGACA 58.422 29.630 0.00 0.00 31.76 3.58
203 204 8.857216 GTCATGAGAAAAATCAATGACAATGAC 58.143 33.333 0.00 0.00 37.50 3.06
204 205 8.799367 AGTCATGAGAAAAATCAATGACAATGA 58.201 29.630 18.60 0.00 38.63 2.57
205 206 8.981724 AGTCATGAGAAAAATCAATGACAATG 57.018 30.769 18.60 0.00 38.63 2.82
206 207 9.991906 AAAGTCATGAGAAAAATCAATGACAAT 57.008 25.926 18.60 9.91 38.63 2.71
207 208 9.820725 AAAAGTCATGAGAAAAATCAATGACAA 57.179 25.926 18.60 0.00 38.63 3.18
210 211 9.630098 GCTAAAAGTCATGAGAAAAATCAATGA 57.370 29.630 0.00 0.00 31.76 2.57
211 212 9.414295 TGCTAAAAGTCATGAGAAAAATCAATG 57.586 29.630 0.00 0.00 31.76 2.82
212 213 9.635520 CTGCTAAAAGTCATGAGAAAAATCAAT 57.364 29.630 0.00 0.00 31.76 2.57
213 214 7.596248 GCTGCTAAAAGTCATGAGAAAAATCAA 59.404 33.333 0.00 0.00 31.76 2.57
214 215 7.086376 GCTGCTAAAAGTCATGAGAAAAATCA 58.914 34.615 0.00 0.00 0.00 2.57
215 216 7.086376 TGCTGCTAAAAGTCATGAGAAAAATC 58.914 34.615 0.00 0.00 0.00 2.17
216 217 6.985117 TGCTGCTAAAAGTCATGAGAAAAAT 58.015 32.000 0.00 0.00 0.00 1.82
217 218 6.389830 TGCTGCTAAAAGTCATGAGAAAAA 57.610 33.333 0.00 0.00 0.00 1.94
218 219 6.579666 ATGCTGCTAAAAGTCATGAGAAAA 57.420 33.333 0.00 0.00 0.00 2.29
219 220 6.579666 AATGCTGCTAAAAGTCATGAGAAA 57.420 33.333 0.00 0.00 0.00 2.52
220 221 6.384224 CAAATGCTGCTAAAAGTCATGAGAA 58.616 36.000 0.00 0.00 0.00 2.87
221 222 5.106038 CCAAATGCTGCTAAAAGTCATGAGA 60.106 40.000 0.00 0.00 0.00 3.27
222 223 5.100259 CCAAATGCTGCTAAAAGTCATGAG 58.900 41.667 0.00 0.00 0.00 2.90
223 224 4.766373 TCCAAATGCTGCTAAAAGTCATGA 59.234 37.500 0.00 0.00 0.00 3.07
224 225 5.063180 TCCAAATGCTGCTAAAAGTCATG 57.937 39.130 0.00 0.00 0.00 3.07
225 226 5.419788 TCATCCAAATGCTGCTAAAAGTCAT 59.580 36.000 0.00 0.00 32.58 3.06
226 227 4.766373 TCATCCAAATGCTGCTAAAAGTCA 59.234 37.500 0.00 0.00 32.58 3.41
227 228 5.314923 TCATCCAAATGCTGCTAAAAGTC 57.685 39.130 0.00 0.00 32.58 3.01
228 229 4.381292 GCTCATCCAAATGCTGCTAAAAGT 60.381 41.667 0.00 0.00 32.80 2.66
229 230 4.110482 GCTCATCCAAATGCTGCTAAAAG 58.890 43.478 0.00 0.00 32.80 2.27
230 231 3.119029 GGCTCATCCAAATGCTGCTAAAA 60.119 43.478 0.00 0.00 34.60 1.52
231 232 2.428171 GGCTCATCCAAATGCTGCTAAA 59.572 45.455 0.00 0.00 34.60 1.85
232 233 2.026641 GGCTCATCCAAATGCTGCTAA 58.973 47.619 0.00 0.00 34.60 3.09
233 234 1.064537 TGGCTCATCCAAATGCTGCTA 60.065 47.619 0.00 0.00 43.21 3.49
234 235 0.323999 TGGCTCATCCAAATGCTGCT 60.324 50.000 0.00 0.00 43.21 4.24
235 236 2.195389 TGGCTCATCCAAATGCTGC 58.805 52.632 0.00 0.00 43.21 5.25
255 256 8.212317 AGTACTTGGTGTGTATTTACGTTTTT 57.788 30.769 0.00 0.00 0.00 1.94
256 257 7.790823 AGTACTTGGTGTGTATTTACGTTTT 57.209 32.000 0.00 0.00 0.00 2.43
257 258 7.495279 TGAAGTACTTGGTGTGTATTTACGTTT 59.505 33.333 14.14 0.00 0.00 3.60
258 259 6.985645 TGAAGTACTTGGTGTGTATTTACGTT 59.014 34.615 14.14 0.00 0.00 3.99
259 260 6.514947 TGAAGTACTTGGTGTGTATTTACGT 58.485 36.000 14.14 0.00 0.00 3.57
260 261 7.410800 TTGAAGTACTTGGTGTGTATTTACG 57.589 36.000 14.14 0.00 0.00 3.18
263 264 8.141268 CCATTTTGAAGTACTTGGTGTGTATTT 58.859 33.333 14.14 0.00 0.00 1.40
264 265 7.255801 CCCATTTTGAAGTACTTGGTGTGTATT 60.256 37.037 14.14 0.00 0.00 1.89
265 266 6.208599 CCCATTTTGAAGTACTTGGTGTGTAT 59.791 38.462 14.14 0.00 0.00 2.29
266 267 5.533154 CCCATTTTGAAGTACTTGGTGTGTA 59.467 40.000 14.14 0.00 0.00 2.90
267 268 4.340950 CCCATTTTGAAGTACTTGGTGTGT 59.659 41.667 14.14 0.00 0.00 3.72
268 269 4.582656 TCCCATTTTGAAGTACTTGGTGTG 59.417 41.667 14.14 5.38 0.00 3.82
269 270 4.798882 TCCCATTTTGAAGTACTTGGTGT 58.201 39.130 14.14 0.00 0.00 4.16
270 271 4.321230 GCTCCCATTTTGAAGTACTTGGTG 60.321 45.833 14.14 8.06 0.00 4.17
271 272 3.826729 GCTCCCATTTTGAAGTACTTGGT 59.173 43.478 14.14 0.00 0.00 3.67
272 273 3.826157 TGCTCCCATTTTGAAGTACTTGG 59.174 43.478 14.14 7.47 0.00 3.61
273 274 5.452078 TTGCTCCCATTTTGAAGTACTTG 57.548 39.130 14.14 0.00 0.00 3.16
274 275 5.047092 CCATTGCTCCCATTTTGAAGTACTT 60.047 40.000 8.13 8.13 0.00 2.24
275 276 4.463891 CCATTGCTCCCATTTTGAAGTACT 59.536 41.667 0.00 0.00 0.00 2.73
276 277 4.462483 TCCATTGCTCCCATTTTGAAGTAC 59.538 41.667 0.00 0.00 0.00 2.73
277 278 4.671831 TCCATTGCTCCCATTTTGAAGTA 58.328 39.130 0.00 0.00 0.00 2.24
278 279 3.509442 TCCATTGCTCCCATTTTGAAGT 58.491 40.909 0.00 0.00 0.00 3.01
279 280 4.748277 ATCCATTGCTCCCATTTTGAAG 57.252 40.909 0.00 0.00 0.00 3.02
280 281 5.022122 TGTATCCATTGCTCCCATTTTGAA 58.978 37.500 0.00 0.00 0.00 2.69
281 282 4.608269 TGTATCCATTGCTCCCATTTTGA 58.392 39.130 0.00 0.00 0.00 2.69
282 283 5.540400 ATGTATCCATTGCTCCCATTTTG 57.460 39.130 0.00 0.00 0.00 2.44
283 284 5.901276 AGAATGTATCCATTGCTCCCATTTT 59.099 36.000 0.00 0.00 41.37 1.82
284 285 5.461327 AGAATGTATCCATTGCTCCCATTT 58.539 37.500 0.00 0.00 41.37 2.32
285 286 5.070823 AGAATGTATCCATTGCTCCCATT 57.929 39.130 0.00 0.00 41.37 3.16
286 287 4.508047 GGAGAATGTATCCATTGCTCCCAT 60.508 45.833 13.70 0.00 42.32 4.00
287 288 3.181440 GGAGAATGTATCCATTGCTCCCA 60.181 47.826 13.70 0.00 42.32 4.37
288 289 3.073650 AGGAGAATGTATCCATTGCTCCC 59.926 47.826 17.79 3.97 45.12 4.30
289 290 4.322567 GAGGAGAATGTATCCATTGCTCC 58.677 47.826 15.51 15.51 44.81 4.70
290 291 4.322567 GGAGGAGAATGTATCCATTGCTC 58.677 47.826 0.00 0.00 41.37 4.26
291 292 3.073650 GGGAGGAGAATGTATCCATTGCT 59.926 47.826 0.00 0.00 41.37 3.91
292 293 3.181440 TGGGAGGAGAATGTATCCATTGC 60.181 47.826 0.00 0.00 41.37 3.56
293 294 4.392940 GTGGGAGGAGAATGTATCCATTG 58.607 47.826 0.00 0.00 41.37 2.82
294 295 3.395941 GGTGGGAGGAGAATGTATCCATT 59.604 47.826 0.00 0.00 43.97 3.16
295 296 2.982488 GGTGGGAGGAGAATGTATCCAT 59.018 50.000 0.00 0.00 39.47 3.41
296 297 2.293519 TGGTGGGAGGAGAATGTATCCA 60.294 50.000 0.00 0.00 39.47 3.41
297 298 2.408565 TGGTGGGAGGAGAATGTATCC 58.591 52.381 0.00 0.00 37.07 2.59
298 299 4.103153 TGATTGGTGGGAGGAGAATGTATC 59.897 45.833 0.00 0.00 0.00 2.24
299 300 4.047166 TGATTGGTGGGAGGAGAATGTAT 58.953 43.478 0.00 0.00 0.00 2.29
300 301 3.199946 GTGATTGGTGGGAGGAGAATGTA 59.800 47.826 0.00 0.00 0.00 2.29
301 302 2.025887 GTGATTGGTGGGAGGAGAATGT 60.026 50.000 0.00 0.00 0.00 2.71
302 303 2.648059 GTGATTGGTGGGAGGAGAATG 58.352 52.381 0.00 0.00 0.00 2.67
303 304 1.566231 GGTGATTGGTGGGAGGAGAAT 59.434 52.381 0.00 0.00 0.00 2.40
304 305 0.991920 GGTGATTGGTGGGAGGAGAA 59.008 55.000 0.00 0.00 0.00 2.87
305 306 0.178876 TGGTGATTGGTGGGAGGAGA 60.179 55.000 0.00 0.00 0.00 3.71
306 307 0.035056 GTGGTGATTGGTGGGAGGAG 60.035 60.000 0.00 0.00 0.00 3.69
307 308 0.770166 TGTGGTGATTGGTGGGAGGA 60.770 55.000 0.00 0.00 0.00 3.71
308 309 0.609131 GTGTGGTGATTGGTGGGAGG 60.609 60.000 0.00 0.00 0.00 4.30
309 310 0.609131 GGTGTGGTGATTGGTGGGAG 60.609 60.000 0.00 0.00 0.00 4.30
310 311 1.356494 TGGTGTGGTGATTGGTGGGA 61.356 55.000 0.00 0.00 0.00 4.37
311 312 0.895100 CTGGTGTGGTGATTGGTGGG 60.895 60.000 0.00 0.00 0.00 4.61
312 313 1.526575 GCTGGTGTGGTGATTGGTGG 61.527 60.000 0.00 0.00 0.00 4.61
313 314 1.526575 GGCTGGTGTGGTGATTGGTG 61.527 60.000 0.00 0.00 0.00 4.17
314 315 1.228552 GGCTGGTGTGGTGATTGGT 60.229 57.895 0.00 0.00 0.00 3.67
315 316 1.978617 GGGCTGGTGTGGTGATTGG 60.979 63.158 0.00 0.00 0.00 3.16
316 317 0.612732 ATGGGCTGGTGTGGTGATTG 60.613 55.000 0.00 0.00 0.00 2.67
317 318 0.323725 GATGGGCTGGTGTGGTGATT 60.324 55.000 0.00 0.00 0.00 2.57
318 319 1.210204 AGATGGGCTGGTGTGGTGAT 61.210 55.000 0.00 0.00 0.00 3.06
319 320 1.847506 AGATGGGCTGGTGTGGTGA 60.848 57.895 0.00 0.00 0.00 4.02
320 321 1.676635 CAGATGGGCTGGTGTGGTG 60.677 63.158 0.00 0.00 41.07 4.17
321 322 1.719063 AACAGATGGGCTGGTGTGGT 61.719 55.000 0.00 0.00 44.70 4.16
322 323 1.075482 AACAGATGGGCTGGTGTGG 59.925 57.895 0.00 0.00 44.70 4.17
323 324 4.828409 AACAGATGGGCTGGTGTG 57.172 55.556 0.00 0.00 44.70 3.82
327 328 1.604308 TGTGCAACAGATGGGCTGG 60.604 57.895 0.00 0.00 45.67 4.85
328 329 4.084265 TGTGCAACAGATGGGCTG 57.916 55.556 0.00 0.00 45.67 4.85
338 339 1.510480 GGTCAGGTGAGCTGTGCAAC 61.510 60.000 11.78 2.16 39.31 4.17
339 340 1.227943 GGTCAGGTGAGCTGTGCAA 60.228 57.895 11.78 0.00 39.31 4.08
340 341 2.387476 CTGGTCAGGTGAGCTGTGCA 62.387 60.000 11.78 0.00 42.60 4.57
341 342 1.670406 CTGGTCAGGTGAGCTGTGC 60.670 63.158 11.78 6.05 42.60 4.57
342 343 4.689484 CTGGTCAGGTGAGCTGTG 57.311 61.111 11.78 0.00 42.60 3.66
343 344 4.302622 ACTGGTCAGGTGAGCTGT 57.697 55.556 11.78 13.91 45.46 4.40
344 345 0.612229 ATGACTGGTCAGGTGAGCTG 59.388 55.000 5.07 5.07 43.61 4.24
345 346 0.901124 GATGACTGGTCAGGTGAGCT 59.099 55.000 10.35 0.00 43.61 4.09
346 347 0.610174 TGATGACTGGTCAGGTGAGC 59.390 55.000 9.33 2.12 43.61 4.26
347 348 1.066573 GGTGATGACTGGTCAGGTGAG 60.067 57.143 9.33 0.00 43.61 3.51
348 349 0.976641 GGTGATGACTGGTCAGGTGA 59.023 55.000 9.33 0.00 43.61 4.02
349 350 0.979665 AGGTGATGACTGGTCAGGTG 59.020 55.000 9.33 0.00 43.61 4.00
350 351 1.270907 GAGGTGATGACTGGTCAGGT 58.729 55.000 9.33 0.00 43.61 4.00
351 352 0.539051 GGAGGTGATGACTGGTCAGG 59.461 60.000 9.33 0.00 43.61 3.86
352 353 1.206610 CAGGAGGTGATGACTGGTCAG 59.793 57.143 9.33 0.00 43.61 3.51
353 354 1.269958 CAGGAGGTGATGACTGGTCA 58.730 55.000 5.87 5.87 44.59 4.02
354 355 0.539051 CCAGGAGGTGATGACTGGTC 59.461 60.000 0.00 0.00 44.21 4.02
355 356 2.689073 CCAGGAGGTGATGACTGGT 58.311 57.895 0.00 0.00 44.21 4.00
357 358 1.222936 GGCCAGGAGGTGATGACTG 59.777 63.158 0.00 0.00 37.19 3.51
358 359 1.229625 TGGCCAGGAGGTGATGACT 60.230 57.895 0.00 0.00 37.19 3.41
359 360 1.078143 GTGGCCAGGAGGTGATGAC 60.078 63.158 5.11 0.00 37.19 3.06
360 361 1.538629 TGTGGCCAGGAGGTGATGA 60.539 57.895 5.11 0.00 37.19 2.92
361 362 1.377725 GTGTGGCCAGGAGGTGATG 60.378 63.158 5.11 0.00 37.19 3.07
362 363 2.959484 CGTGTGGCCAGGAGGTGAT 61.959 63.158 5.11 0.00 37.19 3.06
363 364 3.625897 CGTGTGGCCAGGAGGTGA 61.626 66.667 5.11 0.00 37.19 4.02
364 365 2.107041 TTACGTGTGGCCAGGAGGTG 62.107 60.000 5.11 0.00 37.19 4.00
365 366 1.827399 CTTACGTGTGGCCAGGAGGT 61.827 60.000 5.11 10.61 37.19 3.85
366 367 1.079127 CTTACGTGTGGCCAGGAGG 60.079 63.158 5.11 3.97 38.23 4.30
367 368 0.537188 ATCTTACGTGTGGCCAGGAG 59.463 55.000 5.11 1.99 0.00 3.69
368 369 0.535335 GATCTTACGTGTGGCCAGGA 59.465 55.000 5.11 0.00 0.00 3.86
369 370 0.537188 AGATCTTACGTGTGGCCAGG 59.463 55.000 5.11 0.06 0.00 4.45
370 371 2.386661 AAGATCTTACGTGTGGCCAG 57.613 50.000 5.11 0.00 0.00 4.85
371 372 3.241067 GTAAGATCTTACGTGTGGCCA 57.759 47.619 25.68 0.00 36.47 5.36
380 381 5.800941 CACGTTGGACTGAGTAAGATCTTAC 59.199 44.000 30.31 30.31 44.22 2.34
381 382 5.475909 ACACGTTGGACTGAGTAAGATCTTA 59.524 40.000 11.24 11.24 0.00 2.10
382 383 4.281182 ACACGTTGGACTGAGTAAGATCTT 59.719 41.667 13.56 13.56 0.00 2.40
383 384 3.827302 ACACGTTGGACTGAGTAAGATCT 59.173 43.478 0.00 0.00 0.00 2.75
384 385 4.175787 ACACGTTGGACTGAGTAAGATC 57.824 45.455 0.00 0.00 0.00 2.75
385 386 4.038763 TGAACACGTTGGACTGAGTAAGAT 59.961 41.667 0.00 0.00 0.00 2.40
386 387 3.382227 TGAACACGTTGGACTGAGTAAGA 59.618 43.478 0.00 0.00 0.00 2.10
387 388 3.489785 GTGAACACGTTGGACTGAGTAAG 59.510 47.826 0.00 0.00 0.00 2.34
388 389 3.119065 TGTGAACACGTTGGACTGAGTAA 60.119 43.478 0.00 0.00 0.00 2.24
389 390 2.427812 TGTGAACACGTTGGACTGAGTA 59.572 45.455 0.00 0.00 0.00 2.59
390 391 1.206132 TGTGAACACGTTGGACTGAGT 59.794 47.619 0.00 0.00 0.00 3.41
391 392 1.593006 GTGTGAACACGTTGGACTGAG 59.407 52.381 0.00 0.00 37.10 3.35
392 393 1.647346 GTGTGAACACGTTGGACTGA 58.353 50.000 0.00 0.00 37.10 3.41
402 403 8.395633 GGGTCTTATATGTTAATGTGTGAACAC 58.604 37.037 6.63 6.63 46.59 3.32
403 404 7.554835 GGGGTCTTATATGTTAATGTGTGAACA 59.445 37.037 0.00 0.00 39.74 3.18
404 405 7.554835 TGGGGTCTTATATGTTAATGTGTGAAC 59.445 37.037 0.00 0.00 0.00 3.18
405 406 7.554835 GTGGGGTCTTATATGTTAATGTGTGAA 59.445 37.037 0.00 0.00 0.00 3.18
406 407 7.051623 GTGGGGTCTTATATGTTAATGTGTGA 58.948 38.462 0.00 0.00 0.00 3.58
407 408 7.054124 AGTGGGGTCTTATATGTTAATGTGTG 58.946 38.462 0.00 0.00 0.00 3.82
408 409 7.208064 AGTGGGGTCTTATATGTTAATGTGT 57.792 36.000 0.00 0.00 0.00 3.72
409 410 8.429641 ACTAGTGGGGTCTTATATGTTAATGTG 58.570 37.037 0.00 0.00 0.00 3.21
410 411 8.562949 ACTAGTGGGGTCTTATATGTTAATGT 57.437 34.615 0.00 0.00 0.00 2.71
411 412 8.095169 GGACTAGTGGGGTCTTATATGTTAATG 58.905 40.741 0.00 0.00 34.47 1.90
412 413 7.039223 CGGACTAGTGGGGTCTTATATGTTAAT 60.039 40.741 0.00 0.00 34.47 1.40
413 414 6.266103 CGGACTAGTGGGGTCTTATATGTTAA 59.734 42.308 0.00 0.00 34.47 2.01
414 415 5.771666 CGGACTAGTGGGGTCTTATATGTTA 59.228 44.000 0.00 0.00 34.47 2.41
415 416 4.587684 CGGACTAGTGGGGTCTTATATGTT 59.412 45.833 0.00 0.00 34.47 2.71
416 417 4.141088 TCGGACTAGTGGGGTCTTATATGT 60.141 45.833 0.00 0.00 34.47 2.29
417 418 4.404640 TCGGACTAGTGGGGTCTTATATG 58.595 47.826 0.00 0.00 34.47 1.78
418 419 4.736611 TCGGACTAGTGGGGTCTTATAT 57.263 45.455 0.00 0.00 34.47 0.86
419 420 4.736611 ATCGGACTAGTGGGGTCTTATA 57.263 45.455 0.00 0.00 34.47 0.98
420 421 3.614568 ATCGGACTAGTGGGGTCTTAT 57.385 47.619 0.00 0.00 34.47 1.73
421 422 3.028850 CAATCGGACTAGTGGGGTCTTA 58.971 50.000 0.00 0.00 34.47 2.10
422 423 1.831736 CAATCGGACTAGTGGGGTCTT 59.168 52.381 0.00 0.00 34.47 3.01
423 424 1.006758 TCAATCGGACTAGTGGGGTCT 59.993 52.381 0.00 0.00 34.47 3.85
424 425 1.481871 TCAATCGGACTAGTGGGGTC 58.518 55.000 0.00 0.00 0.00 4.46
425 426 2.176247 ATCAATCGGACTAGTGGGGT 57.824 50.000 0.00 0.00 0.00 4.95
426 427 4.101119 AGTTAATCAATCGGACTAGTGGGG 59.899 45.833 0.00 0.00 0.00 4.96
427 428 5.277857 AGTTAATCAATCGGACTAGTGGG 57.722 43.478 0.00 0.00 0.00 4.61
428 429 6.040616 AGGTAGTTAATCAATCGGACTAGTGG 59.959 42.308 0.00 0.00 0.00 4.00
429 430 7.040473 AGGTAGTTAATCAATCGGACTAGTG 57.960 40.000 0.00 0.00 0.00 2.74
430 431 7.657023 AAGGTAGTTAATCAATCGGACTAGT 57.343 36.000 0.00 0.00 0.00 2.57
431 432 8.943909 AAAAGGTAGTTAATCAATCGGACTAG 57.056 34.615 0.00 0.00 0.00 2.57
433 434 9.729281 TTAAAAAGGTAGTTAATCAATCGGACT 57.271 29.630 0.00 0.00 0.00 3.85
458 459 9.190317 GAGAATGGGAGAAAATAGTTTGGTATT 57.810 33.333 0.00 0.00 0.00 1.89
459 460 8.336235 TGAGAATGGGAGAAAATAGTTTGGTAT 58.664 33.333 0.00 0.00 0.00 2.73
460 461 7.695055 TGAGAATGGGAGAAAATAGTTTGGTA 58.305 34.615 0.00 0.00 0.00 3.25
461 462 6.552008 TGAGAATGGGAGAAAATAGTTTGGT 58.448 36.000 0.00 0.00 0.00 3.67
462 463 7.201857 GGATGAGAATGGGAGAAAATAGTTTGG 60.202 40.741 0.00 0.00 0.00 3.28
463 464 7.201857 GGGATGAGAATGGGAGAAAATAGTTTG 60.202 40.741 0.00 0.00 0.00 2.93
464 465 6.836007 GGGATGAGAATGGGAGAAAATAGTTT 59.164 38.462 0.00 0.00 0.00 2.66
465 466 6.068853 TGGGATGAGAATGGGAGAAAATAGTT 60.069 38.462 0.00 0.00 0.00 2.24
466 467 5.433051 TGGGATGAGAATGGGAGAAAATAGT 59.567 40.000 0.00 0.00 0.00 2.12
467 468 5.945310 TGGGATGAGAATGGGAGAAAATAG 58.055 41.667 0.00 0.00 0.00 1.73
468 469 5.992564 TGGGATGAGAATGGGAGAAAATA 57.007 39.130 0.00 0.00 0.00 1.40
469 470 4.886755 TGGGATGAGAATGGGAGAAAAT 57.113 40.909 0.00 0.00 0.00 1.82
470 471 4.344104 GTTGGGATGAGAATGGGAGAAAA 58.656 43.478 0.00 0.00 0.00 2.29
471 472 3.309121 GGTTGGGATGAGAATGGGAGAAA 60.309 47.826 0.00 0.00 0.00 2.52
472 473 2.242196 GGTTGGGATGAGAATGGGAGAA 59.758 50.000 0.00 0.00 0.00 2.87
473 474 1.846439 GGTTGGGATGAGAATGGGAGA 59.154 52.381 0.00 0.00 0.00 3.71
474 475 1.565759 TGGTTGGGATGAGAATGGGAG 59.434 52.381 0.00 0.00 0.00 4.30
475 476 1.679981 TGGTTGGGATGAGAATGGGA 58.320 50.000 0.00 0.00 0.00 4.37
476 477 2.761786 ATGGTTGGGATGAGAATGGG 57.238 50.000 0.00 0.00 0.00 4.00
477 478 4.733165 ACATATGGTTGGGATGAGAATGG 58.267 43.478 7.80 0.00 0.00 3.16
478 479 5.707298 GGTACATATGGTTGGGATGAGAATG 59.293 44.000 7.80 0.00 0.00 2.67
479 480 5.372363 TGGTACATATGGTTGGGATGAGAAT 59.628 40.000 7.80 0.00 0.00 2.40
480 481 4.724293 TGGTACATATGGTTGGGATGAGAA 59.276 41.667 7.80 0.00 0.00 2.87
481 482 4.302930 TGGTACATATGGTTGGGATGAGA 58.697 43.478 7.80 0.00 0.00 3.27
482 483 4.705110 TGGTACATATGGTTGGGATGAG 57.295 45.455 7.80 0.00 0.00 2.90
483 484 4.385865 GGTTGGTACATATGGTTGGGATGA 60.386 45.833 7.80 0.00 39.30 2.92
484 485 3.888930 GGTTGGTACATATGGTTGGGATG 59.111 47.826 7.80 0.00 39.30 3.51
485 486 3.434453 CGGTTGGTACATATGGTTGGGAT 60.434 47.826 7.80 0.00 39.30 3.85
486 487 2.092861 CGGTTGGTACATATGGTTGGGA 60.093 50.000 7.80 0.00 39.30 4.37
487 488 2.092861 TCGGTTGGTACATATGGTTGGG 60.093 50.000 7.80 0.00 39.30 4.12
488 489 3.269538 TCGGTTGGTACATATGGTTGG 57.730 47.619 7.80 0.00 39.30 3.77
489 490 5.828299 AATTCGGTTGGTACATATGGTTG 57.172 39.130 7.80 0.00 39.30 3.77
490 491 5.712917 ACAAATTCGGTTGGTACATATGGTT 59.287 36.000 7.80 0.00 39.30 3.67
491 492 5.258051 ACAAATTCGGTTGGTACATATGGT 58.742 37.500 7.80 0.00 39.30 3.55
492 493 5.828299 ACAAATTCGGTTGGTACATATGG 57.172 39.130 7.80 0.00 39.30 2.74
493 494 7.810282 TGAAAACAAATTCGGTTGGTACATATG 59.190 33.333 0.00 0.00 32.29 1.78
494 495 7.887381 TGAAAACAAATTCGGTTGGTACATAT 58.113 30.769 0.00 0.00 32.29 1.78
495 496 7.273320 TGAAAACAAATTCGGTTGGTACATA 57.727 32.000 0.00 0.00 32.29 2.29
496 497 6.150396 TGAAAACAAATTCGGTTGGTACAT 57.850 33.333 0.00 0.00 32.29 2.29
497 498 5.578005 TGAAAACAAATTCGGTTGGTACA 57.422 34.783 0.00 0.00 32.50 2.90
498 499 8.751302 ATAATGAAAACAAATTCGGTTGGTAC 57.249 30.769 0.00 0.00 32.50 3.34
499 500 9.843334 GTATAATGAAAACAAATTCGGTTGGTA 57.157 29.630 0.00 0.00 32.50 3.25
500 501 8.581578 AGTATAATGAAAACAAATTCGGTTGGT 58.418 29.630 0.00 0.00 32.50 3.67
501 502 8.980143 AGTATAATGAAAACAAATTCGGTTGG 57.020 30.769 0.00 0.00 32.50 3.77
509 510 9.783256 GCCGTCTTTAGTATAATGAAAACAAAT 57.217 29.630 0.00 0.00 0.00 2.32
510 511 8.784994 TGCCGTCTTTAGTATAATGAAAACAAA 58.215 29.630 0.00 0.00 0.00 2.83
511 512 8.325421 TGCCGTCTTTAGTATAATGAAAACAA 57.675 30.769 0.00 0.00 0.00 2.83
512 513 7.908827 TGCCGTCTTTAGTATAATGAAAACA 57.091 32.000 0.00 0.00 0.00 2.83
513 514 9.783256 AATTGCCGTCTTTAGTATAATGAAAAC 57.217 29.630 0.00 0.00 0.00 2.43
516 517 9.826574 ACTAATTGCCGTCTTTAGTATAATGAA 57.173 29.630 0.00 0.00 35.09 2.57
517 518 9.256477 CACTAATTGCCGTCTTTAGTATAATGA 57.744 33.333 0.00 0.00 35.09 2.57
518 519 9.042008 ACACTAATTGCCGTCTTTAGTATAATG 57.958 33.333 0.00 0.00 35.09 1.90
520 521 9.740239 CTACACTAATTGCCGTCTTTAGTATAA 57.260 33.333 0.00 0.00 35.09 0.98
521 522 9.123902 TCTACACTAATTGCCGTCTTTAGTATA 57.876 33.333 0.00 0.00 35.09 1.47
522 523 8.004087 TCTACACTAATTGCCGTCTTTAGTAT 57.996 34.615 0.00 0.00 35.09 2.12
523 524 7.395190 TCTACACTAATTGCCGTCTTTAGTA 57.605 36.000 0.00 0.00 35.09 1.82
524 525 6.276832 TCTACACTAATTGCCGTCTTTAGT 57.723 37.500 0.00 0.00 36.79 2.24
525 526 7.491372 TGATTCTACACTAATTGCCGTCTTTAG 59.509 37.037 0.00 0.00 0.00 1.85
526 527 7.324935 TGATTCTACACTAATTGCCGTCTTTA 58.675 34.615 0.00 0.00 0.00 1.85
527 528 6.170506 TGATTCTACACTAATTGCCGTCTTT 58.829 36.000 0.00 0.00 0.00 2.52
528 529 5.730550 TGATTCTACACTAATTGCCGTCTT 58.269 37.500 0.00 0.00 0.00 3.01
529 530 5.339008 TGATTCTACACTAATTGCCGTCT 57.661 39.130 0.00 0.00 0.00 4.18
530 531 5.753438 TGATGATTCTACACTAATTGCCGTC 59.247 40.000 0.00 0.00 0.00 4.79
531 532 5.670485 TGATGATTCTACACTAATTGCCGT 58.330 37.500 0.00 0.00 0.00 5.68
532 533 5.985530 TCTGATGATTCTACACTAATTGCCG 59.014 40.000 0.00 0.00 0.00 5.69
533 534 6.763135 TGTCTGATGATTCTACACTAATTGCC 59.237 38.462 0.00 0.00 0.00 4.52
534 535 7.278646 TGTGTCTGATGATTCTACACTAATTGC 59.721 37.037 0.00 0.00 38.84 3.56
535 536 8.707938 TGTGTCTGATGATTCTACACTAATTG 57.292 34.615 0.00 0.00 38.84 2.32
536 537 9.896645 ATTGTGTCTGATGATTCTACACTAATT 57.103 29.630 0.00 0.00 38.84 1.40
537 538 9.539825 GATTGTGTCTGATGATTCTACACTAAT 57.460 33.333 0.00 0.00 38.84 1.73
538 539 8.531146 TGATTGTGTCTGATGATTCTACACTAA 58.469 33.333 0.00 0.00 38.84 2.24
539 540 8.066612 TGATTGTGTCTGATGATTCTACACTA 57.933 34.615 0.00 0.00 38.84 2.74
540 541 6.939622 TGATTGTGTCTGATGATTCTACACT 58.060 36.000 0.00 0.00 38.84 3.55
541 542 6.815641 ACTGATTGTGTCTGATGATTCTACAC 59.184 38.462 0.00 0.00 38.68 2.90
542 543 6.939622 ACTGATTGTGTCTGATGATTCTACA 58.060 36.000 0.00 0.00 0.00 2.74
543 544 8.812329 GTTACTGATTGTGTCTGATGATTCTAC 58.188 37.037 0.00 0.00 0.00 2.59
544 545 7.981789 GGTTACTGATTGTGTCTGATGATTCTA 59.018 37.037 0.00 0.00 0.00 2.10
545 546 6.820656 GGTTACTGATTGTGTCTGATGATTCT 59.179 38.462 0.00 0.00 0.00 2.40
546 547 6.595326 TGGTTACTGATTGTGTCTGATGATTC 59.405 38.462 0.00 0.00 0.00 2.52
547 548 6.475504 TGGTTACTGATTGTGTCTGATGATT 58.524 36.000 0.00 0.00 0.00 2.57
548 549 6.053632 TGGTTACTGATTGTGTCTGATGAT 57.946 37.500 0.00 0.00 0.00 2.45
549 550 5.482163 TGGTTACTGATTGTGTCTGATGA 57.518 39.130 0.00 0.00 0.00 2.92
550 551 6.558771 TTTGGTTACTGATTGTGTCTGATG 57.441 37.500 0.00 0.00 0.00 3.07
551 552 6.092670 CGATTTGGTTACTGATTGTGTCTGAT 59.907 38.462 0.00 0.00 0.00 2.90
552 553 5.408299 CGATTTGGTTACTGATTGTGTCTGA 59.592 40.000 0.00 0.00 0.00 3.27
553 554 5.179368 ACGATTTGGTTACTGATTGTGTCTG 59.821 40.000 0.00 0.00 0.00 3.51
554 555 5.179368 CACGATTTGGTTACTGATTGTGTCT 59.821 40.000 0.00 0.00 31.99 3.41
555 556 5.178623 TCACGATTTGGTTACTGATTGTGTC 59.821 40.000 0.00 0.00 36.03 3.67
556 557 5.060506 TCACGATTTGGTTACTGATTGTGT 58.939 37.500 0.00 0.00 36.03 3.72
557 558 5.179368 ACTCACGATTTGGTTACTGATTGTG 59.821 40.000 0.00 0.00 35.95 3.33
558 559 5.305585 ACTCACGATTTGGTTACTGATTGT 58.694 37.500 0.00 0.00 0.00 2.71
559 560 5.862924 ACTCACGATTTGGTTACTGATTG 57.137 39.130 0.00 0.00 0.00 2.67
560 561 8.561738 AAATACTCACGATTTGGTTACTGATT 57.438 30.769 0.00 0.00 0.00 2.57
561 562 9.661563 TTAAATACTCACGATTTGGTTACTGAT 57.338 29.630 0.00 0.00 0.00 2.90
562 563 8.928733 GTTAAATACTCACGATTTGGTTACTGA 58.071 33.333 0.00 0.00 0.00 3.41
563 564 8.173130 GGTTAAATACTCACGATTTGGTTACTG 58.827 37.037 0.00 0.00 0.00 2.74
564 565 7.879160 TGGTTAAATACTCACGATTTGGTTACT 59.121 33.333 0.00 0.00 0.00 2.24
565 566 8.031848 TGGTTAAATACTCACGATTTGGTTAC 57.968 34.615 0.00 0.00 0.00 2.50
566 567 8.618702 TTGGTTAAATACTCACGATTTGGTTA 57.381 30.769 0.00 0.00 0.00 2.85
567 568 7.513371 TTGGTTAAATACTCACGATTTGGTT 57.487 32.000 0.00 0.00 0.00 3.67
568 569 7.513371 TTTGGTTAAATACTCACGATTTGGT 57.487 32.000 0.00 0.00 0.00 3.67
569 570 8.696175 GTTTTTGGTTAAATACTCACGATTTGG 58.304 33.333 0.00 0.00 0.00 3.28
570 571 9.458374 AGTTTTTGGTTAAATACTCACGATTTG 57.542 29.630 0.00 0.00 34.37 2.32
573 574 8.724229 GGTAGTTTTTGGTTAAATACTCACGAT 58.276 33.333 0.00 0.00 38.47 3.73
574 575 7.714377 TGGTAGTTTTTGGTTAAATACTCACGA 59.286 33.333 0.00 0.00 38.47 4.35
575 576 7.799914 GTGGTAGTTTTTGGTTAAATACTCACG 59.200 37.037 0.00 0.00 38.47 4.35
786 788 2.279985 TTAACGGCCGTCAACGCA 60.280 55.556 34.29 9.90 38.18 5.24
1224 1226 2.202932 ATCATGCACGTCGGCTCC 60.203 61.111 0.00 0.00 34.04 4.70
1598 1630 7.825270 TCTGTTCTTTTTCAGTTAACACCTACA 59.175 33.333 8.61 0.00 33.89 2.74
2866 2990 4.684484 AGTTCCTAGGTTCAGTTTCGTT 57.316 40.909 9.08 0.00 0.00 3.85
3024 3166 1.209019 GTGAGGATGATGTGCTGGAGT 59.791 52.381 0.00 0.00 0.00 3.85
3196 3338 2.100989 GACGAGGTGGATGAGGTAGTT 58.899 52.381 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.