Multiple sequence alignment - TraesCS7A01G024700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G024700 chr7A 100.000 4857 0 0 1 4857 9739217 9744073 0.000000e+00 8970
1 TraesCS7A01G024700 chr7A 94.530 3364 126 20 1512 4856 709011458 709014782 0.000000e+00 5140
2 TraesCS7A01G024700 chr7A 94.899 3058 98 22 1819 4857 708960018 708963036 0.000000e+00 4730
3 TraesCS7A01G024700 chr7A 89.139 755 52 15 4133 4857 12392338 12391584 0.000000e+00 913
4 TraesCS7A01G024700 chr7A 91.786 487 35 5 1 483 9748684 9749169 0.000000e+00 673
5 TraesCS7A01G024700 chr1D 95.929 3611 96 17 1270 4857 406570942 406567360 0.000000e+00 5806
6 TraesCS7A01G024700 chr1D 93.638 723 32 9 560 1270 406571699 406570979 0.000000e+00 1068
7 TraesCS7A01G024700 chr4D 94.165 3633 150 21 1267 4857 445494232 445490620 0.000000e+00 5478
8 TraesCS7A01G024700 chr4D 93.939 3630 150 27 1270 4857 485399755 485396154 0.000000e+00 5421
9 TraesCS7A01G024700 chr4A 93.959 3642 133 23 1270 4855 660227851 660224241 0.000000e+00 5426
10 TraesCS7A01G024700 chr4A 94.444 666 29 6 612 1270 660228552 660227888 0.000000e+00 1018
11 TraesCS7A01G024700 chr4A 88.193 703 53 13 581 1267 744180445 744181133 0.000000e+00 811
12 TraesCS7A01G024700 chr4A 86.081 273 22 10 1 272 728092916 728092659 3.700000e-71 279
13 TraesCS7A01G024700 chr1A 92.960 3622 181 28 1267 4857 26485247 26481669 0.000000e+00 5208
14 TraesCS7A01G024700 chr3D 94.053 3363 143 23 1523 4857 353998648 354001981 0.000000e+00 5049
15 TraesCS7A01G024700 chr3B 93.720 2882 154 17 2001 4857 40916075 40913196 0.000000e+00 4294
16 TraesCS7A01G024700 chr1B 88.448 3575 330 44 1326 4855 668274527 668270991 0.000000e+00 4237
17 TraesCS7A01G024700 chr1B 94.857 2022 69 13 1267 3269 283848986 283850991 0.000000e+00 3125
18 TraesCS7A01G024700 chr1B 93.961 712 36 7 562 1267 283848239 283848949 0.000000e+00 1070
19 TraesCS7A01G024700 chr1B 91.748 715 31 15 559 1267 42304149 42304841 0.000000e+00 968
20 TraesCS7A01G024700 chr5B 95.342 2018 61 10 1270 3269 442751068 442749066 0.000000e+00 3175
21 TraesCS7A01G024700 chr5B 95.111 2025 62 12 1267 3269 6640817 6642826 0.000000e+00 3157
22 TraesCS7A01G024700 chr5B 95.052 2021 67 9 1267 3269 657405859 657407864 0.000000e+00 3147
23 TraesCS7A01G024700 chr5B 94.811 713 30 5 555 1267 6640075 6640780 0.000000e+00 1105
24 TraesCS7A01G024700 chr5B 93.118 712 40 5 562 1267 657405114 657405822 0.000000e+00 1035
25 TraesCS7A01G024700 chr5B 91.421 711 32 12 561 1270 442751787 442751105 0.000000e+00 948
26 TraesCS7A01G024700 chr2B 94.854 2021 70 10 1267 3269 712750624 712752628 0.000000e+00 3125
27 TraesCS7A01G024700 chr2B 91.994 712 32 14 562 1267 712749895 712750587 0.000000e+00 976
28 TraesCS7A01G024700 chr6B 93.973 1709 63 12 1266 2956 668946338 668944652 0.000000e+00 2549
29 TraesCS7A01G024700 chr6B 94.818 714 31 4 563 1270 703865715 703865002 0.000000e+00 1109
30 TraesCS7A01G024700 chr6B 92.807 709 29 7 562 1270 668947058 668946372 0.000000e+00 1007
31 TraesCS7A01G024700 chr2D 93.204 1339 45 15 1267 2585 474434989 474436301 0.000000e+00 1927


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G024700 chr7A 9739217 9744073 4856 False 8970.0 8970 100.0000 1 4857 1 chr7A.!!$F1 4856
1 TraesCS7A01G024700 chr7A 709011458 709014782 3324 False 5140.0 5140 94.5300 1512 4856 1 chr7A.!!$F4 3344
2 TraesCS7A01G024700 chr7A 708960018 708963036 3018 False 4730.0 4730 94.8990 1819 4857 1 chr7A.!!$F3 3038
3 TraesCS7A01G024700 chr7A 12391584 12392338 754 True 913.0 913 89.1390 4133 4857 1 chr7A.!!$R1 724
4 TraesCS7A01G024700 chr1D 406567360 406571699 4339 True 3437.0 5806 94.7835 560 4857 2 chr1D.!!$R1 4297
5 TraesCS7A01G024700 chr4D 445490620 445494232 3612 True 5478.0 5478 94.1650 1267 4857 1 chr4D.!!$R1 3590
6 TraesCS7A01G024700 chr4D 485396154 485399755 3601 True 5421.0 5421 93.9390 1270 4857 1 chr4D.!!$R2 3587
7 TraesCS7A01G024700 chr4A 660224241 660228552 4311 True 3222.0 5426 94.2015 612 4855 2 chr4A.!!$R2 4243
8 TraesCS7A01G024700 chr4A 744180445 744181133 688 False 811.0 811 88.1930 581 1267 1 chr4A.!!$F1 686
9 TraesCS7A01G024700 chr1A 26481669 26485247 3578 True 5208.0 5208 92.9600 1267 4857 1 chr1A.!!$R1 3590
10 TraesCS7A01G024700 chr3D 353998648 354001981 3333 False 5049.0 5049 94.0530 1523 4857 1 chr3D.!!$F1 3334
11 TraesCS7A01G024700 chr3B 40913196 40916075 2879 True 4294.0 4294 93.7200 2001 4857 1 chr3B.!!$R1 2856
12 TraesCS7A01G024700 chr1B 668270991 668274527 3536 True 4237.0 4237 88.4480 1326 4855 1 chr1B.!!$R1 3529
13 TraesCS7A01G024700 chr1B 283848239 283850991 2752 False 2097.5 3125 94.4090 562 3269 2 chr1B.!!$F2 2707
14 TraesCS7A01G024700 chr1B 42304149 42304841 692 False 968.0 968 91.7480 559 1267 1 chr1B.!!$F1 708
15 TraesCS7A01G024700 chr5B 6640075 6642826 2751 False 2131.0 3157 94.9610 555 3269 2 chr5B.!!$F1 2714
16 TraesCS7A01G024700 chr5B 657405114 657407864 2750 False 2091.0 3147 94.0850 562 3269 2 chr5B.!!$F2 2707
17 TraesCS7A01G024700 chr5B 442749066 442751787 2721 True 2061.5 3175 93.3815 561 3269 2 chr5B.!!$R1 2708
18 TraesCS7A01G024700 chr2B 712749895 712752628 2733 False 2050.5 3125 93.4240 562 3269 2 chr2B.!!$F1 2707
19 TraesCS7A01G024700 chr6B 668944652 668947058 2406 True 1778.0 2549 93.3900 562 2956 2 chr6B.!!$R2 2394
20 TraesCS7A01G024700 chr6B 703865002 703865715 713 True 1109.0 1109 94.8180 563 1270 1 chr6B.!!$R1 707
21 TraesCS7A01G024700 chr2D 474434989 474436301 1312 False 1927.0 1927 93.2040 1267 2585 1 chr2D.!!$F1 1318

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 446 0.032017 CACCTCCTAGCTACACCCCT 60.032 60.0 0.00 0.00 0.00 4.79 F
685 686 0.315886 AATACGGTCACTGTGCGTCA 59.684 50.0 14.98 5.18 0.00 4.35 F
1979 2090 0.825010 ACAAGGACAAGCAGGGCAAG 60.825 55.0 0.00 0.00 0.00 4.01 F
1991 2102 0.107312 AGGGCAAGCAGAGCATGTAG 60.107 55.0 0.00 0.00 29.47 2.74 F
1996 2107 0.329261 AAGCAGAGCATGTAGGCCAA 59.671 50.0 5.01 0.00 0.00 4.52 F
3016 3210 0.899019 TGTGCCTTGATGCATGCAAT 59.101 45.0 26.68 13.38 44.30 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1979 2090 0.107508 TCTTGGCCTACATGCTCTGC 60.108 55.000 3.32 0.0 0.00 4.26 R
1990 2101 1.561076 TGCTGTACATCATCTTGGCCT 59.439 47.619 3.32 0.0 0.00 5.19 R
3016 3210 3.774766 TGCAACCTTGAAGATAGCCTCTA 59.225 43.478 0.00 0.0 32.41 2.43 R
3639 3844 4.876107 ACTTACTTGTTGAACACCTCACAG 59.124 41.667 0.00 0.0 32.21 3.66 R
3854 4062 5.903010 TGATCTTAGGGCACATTACTCCTTA 59.097 40.000 0.00 0.0 0.00 2.69 R
4457 4666 0.468029 CTGGGCTTGTTGTGGAGGTT 60.468 55.000 0.00 0.0 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.934457 AAAAACCTATTTGGGCGAGTG 57.066 42.857 0.00 0.00 41.11 3.51
38 39 2.871096 AAACCTATTTGGGCGAGTGA 57.129 45.000 0.00 0.00 41.11 3.41
39 40 2.109425 AACCTATTTGGGCGAGTGAC 57.891 50.000 0.00 0.00 41.11 3.67
47 48 3.139029 GGGCGAGTGACCTAAAGTG 57.861 57.895 0.00 0.00 41.70 3.16
48 49 0.320697 GGGCGAGTGACCTAAAGTGT 59.679 55.000 0.00 0.00 41.70 3.55
49 50 1.270678 GGGCGAGTGACCTAAAGTGTT 60.271 52.381 0.00 0.00 41.70 3.32
50 51 2.490991 GGCGAGTGACCTAAAGTGTTT 58.509 47.619 0.00 0.00 0.00 2.83
51 52 2.876550 GGCGAGTGACCTAAAGTGTTTT 59.123 45.455 0.00 0.00 0.00 2.43
52 53 3.314357 GGCGAGTGACCTAAAGTGTTTTT 59.686 43.478 0.00 0.00 0.00 1.94
53 54 4.524749 GCGAGTGACCTAAAGTGTTTTTC 58.475 43.478 0.00 0.00 0.00 2.29
54 55 4.034742 GCGAGTGACCTAAAGTGTTTTTCA 59.965 41.667 0.00 0.00 0.00 2.69
55 56 5.448089 GCGAGTGACCTAAAGTGTTTTTCAA 60.448 40.000 0.00 0.00 0.00 2.69
56 57 6.548171 CGAGTGACCTAAAGTGTTTTTCAAA 58.452 36.000 0.00 0.00 0.00 2.69
57 58 7.024768 CGAGTGACCTAAAGTGTTTTTCAAAA 58.975 34.615 0.00 0.00 0.00 2.44
58 59 7.007995 CGAGTGACCTAAAGTGTTTTTCAAAAC 59.992 37.037 8.02 8.02 46.40 2.43
59 60 7.094631 AGTGACCTAAAGTGTTTTTCAAAACC 58.905 34.615 11.70 4.67 45.82 3.27
60 61 7.039293 AGTGACCTAAAGTGTTTTTCAAAACCT 60.039 33.333 11.70 6.54 45.82 3.50
61 62 7.601130 GTGACCTAAAGTGTTTTTCAAAACCTT 59.399 33.333 11.70 11.07 45.82 3.50
62 63 8.151596 TGACCTAAAGTGTTTTTCAAAACCTTT 58.848 29.630 21.87 21.87 45.82 3.11
63 64 8.317891 ACCTAAAGTGTTTTTCAAAACCTTTG 57.682 30.769 24.14 17.36 45.82 2.77
64 65 7.389330 ACCTAAAGTGTTTTTCAAAACCTTTGG 59.611 33.333 24.14 22.35 45.82 3.28
65 66 7.389330 CCTAAAGTGTTTTTCAAAACCTTTGGT 59.611 33.333 24.14 12.69 45.82 3.67
66 67 6.552859 AAGTGTTTTTCAAAACCTTTGGTG 57.447 33.333 11.70 0.00 45.82 4.17
67 68 5.616270 AGTGTTTTTCAAAACCTTTGGTGT 58.384 33.333 11.70 0.00 45.82 4.16
68 69 6.058833 AGTGTTTTTCAAAACCTTTGGTGTT 58.941 32.000 11.70 0.00 45.82 3.32
69 70 7.217906 AGTGTTTTTCAAAACCTTTGGTGTTA 58.782 30.769 11.70 0.00 45.82 2.41
70 71 7.386573 AGTGTTTTTCAAAACCTTTGGTGTTAG 59.613 33.333 11.70 0.00 45.82 2.34
71 72 7.171848 GTGTTTTTCAAAACCTTTGGTGTTAGT 59.828 33.333 11.70 0.00 45.82 2.24
72 73 7.385478 TGTTTTTCAAAACCTTTGGTGTTAGTC 59.615 33.333 11.70 0.00 45.82 2.59
73 74 5.585820 TTCAAAACCTTTGGTGTTAGTCC 57.414 39.130 0.00 0.00 35.34 3.85
74 75 4.601084 TCAAAACCTTTGGTGTTAGTCCA 58.399 39.130 0.00 0.00 35.34 4.02
75 76 5.205056 TCAAAACCTTTGGTGTTAGTCCAT 58.795 37.500 0.00 0.00 35.34 3.41
76 77 6.366340 TCAAAACCTTTGGTGTTAGTCCATA 58.634 36.000 0.00 0.00 35.34 2.74
77 78 6.834451 TCAAAACCTTTGGTGTTAGTCCATAA 59.166 34.615 0.00 0.00 35.34 1.90
78 79 7.342284 TCAAAACCTTTGGTGTTAGTCCATAAA 59.658 33.333 0.00 0.00 35.34 1.40
79 80 7.849322 AAACCTTTGGTGTTAGTCCATAAAT 57.151 32.000 0.00 0.00 35.34 1.40
80 81 6.834168 ACCTTTGGTGTTAGTCCATAAATG 57.166 37.500 0.00 0.00 32.98 2.32
81 82 5.185056 ACCTTTGGTGTTAGTCCATAAATGC 59.815 40.000 0.00 0.00 32.98 3.56
82 83 5.418840 CCTTTGGTGTTAGTCCATAAATGCT 59.581 40.000 0.00 0.00 34.75 3.79
83 84 6.071391 CCTTTGGTGTTAGTCCATAAATGCTT 60.071 38.462 0.00 0.00 34.75 3.91
84 85 5.895636 TGGTGTTAGTCCATAAATGCTTG 57.104 39.130 0.00 0.00 0.00 4.01
85 86 4.704540 TGGTGTTAGTCCATAAATGCTTGG 59.295 41.667 0.00 0.00 0.00 3.61
86 87 4.705023 GGTGTTAGTCCATAAATGCTTGGT 59.295 41.667 0.00 0.00 34.48 3.67
87 88 5.163652 GGTGTTAGTCCATAAATGCTTGGTC 60.164 44.000 0.00 0.00 34.48 4.02
88 89 4.634004 TGTTAGTCCATAAATGCTTGGTCG 59.366 41.667 0.00 0.00 34.48 4.79
89 90 3.350219 AGTCCATAAATGCTTGGTCGT 57.650 42.857 0.00 0.00 34.48 4.34
90 91 3.270877 AGTCCATAAATGCTTGGTCGTC 58.729 45.455 0.00 0.00 34.48 4.20
91 92 3.055094 AGTCCATAAATGCTTGGTCGTCT 60.055 43.478 0.00 0.00 34.48 4.18
92 93 3.063997 GTCCATAAATGCTTGGTCGTCTG 59.936 47.826 0.00 0.00 34.48 3.51
93 94 3.009723 CCATAAATGCTTGGTCGTCTGT 58.990 45.455 0.00 0.00 0.00 3.41
94 95 3.440173 CCATAAATGCTTGGTCGTCTGTT 59.560 43.478 0.00 0.00 0.00 3.16
95 96 4.406069 CATAAATGCTTGGTCGTCTGTTG 58.594 43.478 0.00 0.00 0.00 3.33
96 97 1.967319 AATGCTTGGTCGTCTGTTGT 58.033 45.000 0.00 0.00 0.00 3.32
97 98 1.229428 ATGCTTGGTCGTCTGTTGTG 58.771 50.000 0.00 0.00 0.00 3.33
98 99 0.107897 TGCTTGGTCGTCTGTTGTGT 60.108 50.000 0.00 0.00 0.00 3.72
99 100 1.014352 GCTTGGTCGTCTGTTGTGTT 58.986 50.000 0.00 0.00 0.00 3.32
100 101 1.400494 GCTTGGTCGTCTGTTGTGTTT 59.600 47.619 0.00 0.00 0.00 2.83
101 102 2.159435 GCTTGGTCGTCTGTTGTGTTTT 60.159 45.455 0.00 0.00 0.00 2.43
102 103 3.672241 GCTTGGTCGTCTGTTGTGTTTTT 60.672 43.478 0.00 0.00 0.00 1.94
123 124 5.438698 TTTTTACGGGATCATAGTGGGAA 57.561 39.130 0.00 0.00 0.00 3.97
124 125 5.438698 TTTTACGGGATCATAGTGGGAAA 57.561 39.130 0.00 0.00 0.00 3.13
125 126 4.411256 TTACGGGATCATAGTGGGAAAC 57.589 45.455 0.00 0.00 0.00 2.78
126 127 2.478292 ACGGGATCATAGTGGGAAACT 58.522 47.619 0.00 0.00 43.40 2.66
127 128 3.649843 ACGGGATCATAGTGGGAAACTA 58.350 45.455 0.00 0.00 45.47 2.24
128 129 3.641906 ACGGGATCATAGTGGGAAACTAG 59.358 47.826 0.00 0.00 44.61 2.57
129 130 3.006967 CGGGATCATAGTGGGAAACTAGG 59.993 52.174 0.00 0.00 44.61 3.02
130 131 3.974642 GGGATCATAGTGGGAAACTAGGT 59.025 47.826 0.00 0.00 44.61 3.08
131 132 5.152934 GGGATCATAGTGGGAAACTAGGTA 58.847 45.833 0.00 0.00 44.61 3.08
132 133 5.011840 GGGATCATAGTGGGAAACTAGGTAC 59.988 48.000 0.00 0.00 44.61 3.34
133 134 5.278858 GGATCATAGTGGGAAACTAGGTACG 60.279 48.000 0.00 0.00 44.61 3.67
134 135 4.858850 TCATAGTGGGAAACTAGGTACGA 58.141 43.478 0.00 0.00 44.61 3.43
135 136 5.263599 TCATAGTGGGAAACTAGGTACGAA 58.736 41.667 0.00 0.00 44.61 3.85
136 137 5.716228 TCATAGTGGGAAACTAGGTACGAAA 59.284 40.000 0.00 0.00 44.61 3.46
137 138 4.961438 AGTGGGAAACTAGGTACGAAAA 57.039 40.909 0.00 0.00 37.36 2.29
138 139 4.891260 AGTGGGAAACTAGGTACGAAAAG 58.109 43.478 0.00 0.00 37.36 2.27
139 140 4.346127 AGTGGGAAACTAGGTACGAAAAGT 59.654 41.667 0.00 0.00 37.36 2.66
140 141 4.450080 GTGGGAAACTAGGTACGAAAAGTG 59.550 45.833 0.00 0.00 0.00 3.16
141 142 4.344679 TGGGAAACTAGGTACGAAAAGTGA 59.655 41.667 0.00 0.00 0.00 3.41
142 143 5.163322 TGGGAAACTAGGTACGAAAAGTGAA 60.163 40.000 0.00 0.00 0.00 3.18
143 144 5.407691 GGGAAACTAGGTACGAAAAGTGAAG 59.592 44.000 0.00 0.00 0.00 3.02
144 145 5.107182 GGAAACTAGGTACGAAAAGTGAAGC 60.107 44.000 0.00 0.00 0.00 3.86
145 146 4.595762 ACTAGGTACGAAAAGTGAAGCA 57.404 40.909 0.00 0.00 0.00 3.91
146 147 4.952460 ACTAGGTACGAAAAGTGAAGCAA 58.048 39.130 0.00 0.00 0.00 3.91
147 148 4.748600 ACTAGGTACGAAAAGTGAAGCAAC 59.251 41.667 0.00 0.00 0.00 4.17
148 149 3.537580 AGGTACGAAAAGTGAAGCAACA 58.462 40.909 0.00 0.00 0.00 3.33
149 150 4.134563 AGGTACGAAAAGTGAAGCAACAT 58.865 39.130 0.00 0.00 0.00 2.71
150 151 4.578928 AGGTACGAAAAGTGAAGCAACATT 59.421 37.500 0.00 0.00 0.00 2.71
151 152 5.761234 AGGTACGAAAAGTGAAGCAACATTA 59.239 36.000 0.00 0.00 0.00 1.90
152 153 6.073222 AGGTACGAAAAGTGAAGCAACATTAG 60.073 38.462 0.00 0.00 0.00 1.73
153 154 4.537015 ACGAAAAGTGAAGCAACATTAGC 58.463 39.130 0.00 0.00 0.00 3.09
154 155 4.036262 ACGAAAAGTGAAGCAACATTAGCA 59.964 37.500 0.00 0.00 0.00 3.49
155 156 4.379793 CGAAAAGTGAAGCAACATTAGCAC 59.620 41.667 0.00 0.00 0.00 4.40
156 157 4.916983 AAAGTGAAGCAACATTAGCACA 57.083 36.364 0.00 0.00 0.00 4.57
157 158 5.458041 AAAGTGAAGCAACATTAGCACAT 57.542 34.783 0.00 0.00 0.00 3.21
158 159 4.691860 AGTGAAGCAACATTAGCACATC 57.308 40.909 0.00 0.00 0.00 3.06
159 160 4.330250 AGTGAAGCAACATTAGCACATCT 58.670 39.130 0.00 0.00 0.00 2.90
160 161 4.394300 AGTGAAGCAACATTAGCACATCTC 59.606 41.667 0.00 0.00 0.00 2.75
161 162 3.691118 TGAAGCAACATTAGCACATCTCC 59.309 43.478 0.00 0.00 0.00 3.71
162 163 2.283298 AGCAACATTAGCACATCTCCG 58.717 47.619 0.00 0.00 0.00 4.63
163 164 2.093500 AGCAACATTAGCACATCTCCGA 60.093 45.455 0.00 0.00 0.00 4.55
164 165 2.030946 GCAACATTAGCACATCTCCGAC 59.969 50.000 0.00 0.00 0.00 4.79
165 166 2.604046 ACATTAGCACATCTCCGACC 57.396 50.000 0.00 0.00 0.00 4.79
166 167 2.111384 ACATTAGCACATCTCCGACCT 58.889 47.619 0.00 0.00 0.00 3.85
167 168 2.101582 ACATTAGCACATCTCCGACCTC 59.898 50.000 0.00 0.00 0.00 3.85
168 169 2.145397 TTAGCACATCTCCGACCTCT 57.855 50.000 0.00 0.00 0.00 3.69
169 170 2.145397 TAGCACATCTCCGACCTCTT 57.855 50.000 0.00 0.00 0.00 2.85
170 171 0.820871 AGCACATCTCCGACCTCTTC 59.179 55.000 0.00 0.00 0.00 2.87
171 172 0.820871 GCACATCTCCGACCTCTTCT 59.179 55.000 0.00 0.00 0.00 2.85
172 173 1.205893 GCACATCTCCGACCTCTTCTT 59.794 52.381 0.00 0.00 0.00 2.52
173 174 2.354203 GCACATCTCCGACCTCTTCTTT 60.354 50.000 0.00 0.00 0.00 2.52
174 175 3.257393 CACATCTCCGACCTCTTCTTTG 58.743 50.000 0.00 0.00 0.00 2.77
175 176 2.275318 CATCTCCGACCTCTTCTTTGC 58.725 52.381 0.00 0.00 0.00 3.68
176 177 1.338107 TCTCCGACCTCTTCTTTGCA 58.662 50.000 0.00 0.00 0.00 4.08
177 178 1.273606 TCTCCGACCTCTTCTTTGCAG 59.726 52.381 0.00 0.00 0.00 4.41
178 179 0.320771 TCCGACCTCTTCTTTGCAGC 60.321 55.000 0.00 0.00 0.00 5.25
179 180 0.321122 CCGACCTCTTCTTTGCAGCT 60.321 55.000 0.00 0.00 0.00 4.24
180 181 1.517242 CGACCTCTTCTTTGCAGCTT 58.483 50.000 0.00 0.00 0.00 3.74
181 182 1.876156 CGACCTCTTCTTTGCAGCTTT 59.124 47.619 0.00 0.00 0.00 3.51
182 183 2.350197 CGACCTCTTCTTTGCAGCTTTG 60.350 50.000 0.00 0.00 0.00 2.77
183 184 2.620585 GACCTCTTCTTTGCAGCTTTGT 59.379 45.455 0.00 0.00 0.00 2.83
184 185 2.360165 ACCTCTTCTTTGCAGCTTTGTG 59.640 45.455 0.00 0.00 0.00 3.33
185 186 2.288030 CCTCTTCTTTGCAGCTTTGTGG 60.288 50.000 0.00 0.00 0.00 4.17
186 187 2.620115 CTCTTCTTTGCAGCTTTGTGGA 59.380 45.455 0.00 0.00 0.00 4.02
187 188 2.358898 TCTTCTTTGCAGCTTTGTGGAC 59.641 45.455 0.00 0.00 0.00 4.02
188 189 1.032014 TCTTTGCAGCTTTGTGGACC 58.968 50.000 0.00 0.00 0.00 4.46
189 190 0.746063 CTTTGCAGCTTTGTGGACCA 59.254 50.000 0.00 0.00 0.00 4.02
190 191 1.136695 CTTTGCAGCTTTGTGGACCAA 59.863 47.619 0.00 0.00 0.00 3.67
191 192 0.459489 TTGCAGCTTTGTGGACCAAC 59.541 50.000 0.00 0.00 31.20 3.77
192 193 1.363807 GCAGCTTTGTGGACCAACC 59.636 57.895 0.00 0.00 39.54 3.77
193 194 2.041153 CAGCTTTGTGGACCAACCC 58.959 57.895 0.00 0.00 38.00 4.11
194 195 0.754957 CAGCTTTGTGGACCAACCCA 60.755 55.000 0.00 0.00 38.00 4.51
195 196 0.188342 AGCTTTGTGGACCAACCCAT 59.812 50.000 0.00 0.00 38.66 4.00
196 197 0.603065 GCTTTGTGGACCAACCCATC 59.397 55.000 0.00 0.00 38.66 3.51
197 198 1.993956 CTTTGTGGACCAACCCATCA 58.006 50.000 0.00 0.00 38.66 3.07
198 199 2.315176 CTTTGTGGACCAACCCATCAA 58.685 47.619 0.00 0.00 38.66 2.57
199 200 2.692709 TTGTGGACCAACCCATCAAT 57.307 45.000 0.00 0.00 38.66 2.57
200 201 1.921982 TGTGGACCAACCCATCAATG 58.078 50.000 0.00 0.00 38.66 2.82
201 202 1.146774 TGTGGACCAACCCATCAATGT 59.853 47.619 0.00 0.00 38.66 2.71
202 203 2.247358 GTGGACCAACCCATCAATGTT 58.753 47.619 0.00 0.00 38.66 2.71
203 204 2.029110 GTGGACCAACCCATCAATGTTG 60.029 50.000 0.00 0.00 41.13 3.33
204 205 2.247358 GGACCAACCCATCAATGTTGT 58.753 47.619 0.00 0.00 40.12 3.32
205 206 2.029110 GGACCAACCCATCAATGTTGTG 60.029 50.000 0.00 0.00 40.12 3.33
206 207 2.627699 GACCAACCCATCAATGTTGTGT 59.372 45.455 0.00 0.00 40.12 3.72
207 208 2.364970 ACCAACCCATCAATGTTGTGTG 59.635 45.455 0.00 0.00 40.12 3.82
208 209 2.406130 CAACCCATCAATGTTGTGTGC 58.594 47.619 0.00 0.00 37.62 4.57
209 210 0.968405 ACCCATCAATGTTGTGTGCC 59.032 50.000 0.00 0.00 0.00 5.01
210 211 0.247185 CCCATCAATGTTGTGTGCCC 59.753 55.000 0.00 0.00 0.00 5.36
211 212 0.109179 CCATCAATGTTGTGTGCCCG 60.109 55.000 0.00 0.00 0.00 6.13
212 213 0.109179 CATCAATGTTGTGTGCCCGG 60.109 55.000 0.00 0.00 0.00 5.73
213 214 0.539438 ATCAATGTTGTGTGCCCGGT 60.539 50.000 0.00 0.00 0.00 5.28
214 215 1.007502 CAATGTTGTGTGCCCGGTG 60.008 57.895 0.00 0.00 0.00 4.94
215 216 1.454847 AATGTTGTGTGCCCGGTGT 60.455 52.632 0.00 0.00 0.00 4.16
216 217 1.040339 AATGTTGTGTGCCCGGTGTT 61.040 50.000 0.00 0.00 0.00 3.32
217 218 1.452145 ATGTTGTGTGCCCGGTGTTC 61.452 55.000 0.00 0.00 0.00 3.18
218 219 2.517402 TTGTGTGCCCGGTGTTCC 60.517 61.111 0.00 0.00 0.00 3.62
219 220 3.050354 TTGTGTGCCCGGTGTTCCT 62.050 57.895 0.00 0.00 0.00 3.36
220 221 1.697082 TTGTGTGCCCGGTGTTCCTA 61.697 55.000 0.00 0.00 0.00 2.94
221 222 1.071814 GTGTGCCCGGTGTTCCTAA 59.928 57.895 0.00 0.00 0.00 2.69
222 223 0.322187 GTGTGCCCGGTGTTCCTAAT 60.322 55.000 0.00 0.00 0.00 1.73
223 224 1.065998 GTGTGCCCGGTGTTCCTAATA 60.066 52.381 0.00 0.00 0.00 0.98
224 225 1.841277 TGTGCCCGGTGTTCCTAATAT 59.159 47.619 0.00 0.00 0.00 1.28
225 226 2.240160 TGTGCCCGGTGTTCCTAATATT 59.760 45.455 0.00 0.00 0.00 1.28
226 227 3.284617 GTGCCCGGTGTTCCTAATATTT 58.715 45.455 0.00 0.00 0.00 1.40
227 228 3.066203 GTGCCCGGTGTTCCTAATATTTG 59.934 47.826 0.00 0.00 0.00 2.32
228 229 2.034179 GCCCGGTGTTCCTAATATTTGC 59.966 50.000 0.00 0.00 0.00 3.68
229 230 3.283751 CCCGGTGTTCCTAATATTTGCA 58.716 45.455 0.00 0.00 0.00 4.08
230 231 3.066203 CCCGGTGTTCCTAATATTTGCAC 59.934 47.826 0.00 0.00 0.00 4.57
231 232 3.945285 CCGGTGTTCCTAATATTTGCACT 59.055 43.478 0.00 0.00 0.00 4.40
232 233 4.398044 CCGGTGTTCCTAATATTTGCACTT 59.602 41.667 0.00 0.00 0.00 3.16
233 234 5.105917 CCGGTGTTCCTAATATTTGCACTTT 60.106 40.000 0.00 0.00 0.00 2.66
234 235 5.799936 CGGTGTTCCTAATATTTGCACTTTG 59.200 40.000 0.00 0.00 0.00 2.77
235 236 6.569610 CGGTGTTCCTAATATTTGCACTTTGT 60.570 38.462 0.00 0.00 0.00 2.83
236 237 7.361371 CGGTGTTCCTAATATTTGCACTTTGTA 60.361 37.037 0.00 0.00 0.00 2.41
237 238 7.968405 GGTGTTCCTAATATTTGCACTTTGTAG 59.032 37.037 0.00 0.00 0.00 2.74
238 239 8.726988 GTGTTCCTAATATTTGCACTTTGTAGA 58.273 33.333 0.00 0.00 0.00 2.59
239 240 9.461312 TGTTCCTAATATTTGCACTTTGTAGAT 57.539 29.630 0.00 0.00 0.00 1.98
294 295 8.450578 AGACATGTTCTTAGAACAAATTCACA 57.549 30.769 28.17 6.73 37.29 3.58
295 296 9.071276 AGACATGTTCTTAGAACAAATTCACAT 57.929 29.630 28.17 9.45 37.29 3.21
296 297 9.683069 GACATGTTCTTAGAACAAATTCACATT 57.317 29.630 28.17 8.77 37.29 2.71
302 303 9.672086 TTCTTAGAACAAATTCACATTTAACGG 57.328 29.630 0.00 0.00 37.29 4.44
303 304 9.058174 TCTTAGAACAAATTCACATTTAACGGA 57.942 29.630 0.00 0.00 37.29 4.69
304 305 9.840427 CTTAGAACAAATTCACATTTAACGGAT 57.160 29.630 0.00 0.00 37.29 4.18
307 308 9.541143 AGAACAAATTCACATTTAACGGATTTT 57.459 25.926 0.00 0.00 37.29 1.82
308 309 9.791838 GAACAAATTCACATTTAACGGATTTTC 57.208 29.630 0.00 0.00 34.70 2.29
309 310 8.305441 ACAAATTCACATTTAACGGATTTTCC 57.695 30.769 0.00 0.00 30.90 3.13
310 311 8.147704 ACAAATTCACATTTAACGGATTTTCCT 58.852 29.630 0.00 0.00 30.45 3.36
311 312 8.987890 CAAATTCACATTTAACGGATTTTCCTT 58.012 29.630 0.00 0.00 30.45 3.36
312 313 8.532977 AATTCACATTTAACGGATTTTCCTTG 57.467 30.769 0.00 0.00 33.30 3.61
313 314 6.885952 TCACATTTAACGGATTTTCCTTGA 57.114 33.333 0.00 0.00 33.30 3.02
314 315 7.278461 TCACATTTAACGGATTTTCCTTGAA 57.722 32.000 0.00 0.00 33.30 2.69
315 316 7.367285 TCACATTTAACGGATTTTCCTTGAAG 58.633 34.615 0.00 0.00 33.30 3.02
316 317 7.229707 TCACATTTAACGGATTTTCCTTGAAGA 59.770 33.333 0.00 0.00 33.30 2.87
317 318 8.028938 CACATTTAACGGATTTTCCTTGAAGAT 58.971 33.333 0.00 0.00 33.30 2.40
318 319 9.238368 ACATTTAACGGATTTTCCTTGAAGATA 57.762 29.630 0.00 0.00 33.30 1.98
319 320 9.503427 CATTTAACGGATTTTCCTTGAAGATAC 57.497 33.333 0.00 0.00 33.30 2.24
320 321 5.796350 AACGGATTTTCCTTGAAGATACG 57.204 39.130 9.61 9.61 43.25 3.06
321 322 4.828829 ACGGATTTTCCTTGAAGATACGT 58.171 39.130 10.72 10.72 44.84 3.57
322 323 5.243207 ACGGATTTTCCTTGAAGATACGTT 58.757 37.500 10.72 0.00 46.56 3.99
323 324 5.704053 ACGGATTTTCCTTGAAGATACGTTT 59.296 36.000 10.72 0.00 46.56 3.60
324 325 6.206048 ACGGATTTTCCTTGAAGATACGTTTT 59.794 34.615 10.72 0.00 46.56 2.43
325 326 7.081976 CGGATTTTCCTTGAAGATACGTTTTT 58.918 34.615 0.00 0.00 36.26 1.94
326 327 7.270579 CGGATTTTCCTTGAAGATACGTTTTTC 59.729 37.037 0.00 0.00 36.26 2.29
327 328 8.079809 GGATTTTCCTTGAAGATACGTTTTTCA 58.920 33.333 0.00 0.00 32.53 2.69
328 329 8.797266 ATTTTCCTTGAAGATACGTTTTTCAC 57.203 30.769 0.00 0.00 31.11 3.18
329 330 6.928979 TTCCTTGAAGATACGTTTTTCACA 57.071 33.333 0.00 0.00 31.11 3.58
330 331 6.928979 TCCTTGAAGATACGTTTTTCACAA 57.071 33.333 0.00 0.22 31.11 3.33
331 332 7.504924 TCCTTGAAGATACGTTTTTCACAAT 57.495 32.000 0.00 0.00 31.11 2.71
332 333 7.359595 TCCTTGAAGATACGTTTTTCACAATG 58.640 34.615 0.00 0.00 31.11 2.82
333 334 6.582295 CCTTGAAGATACGTTTTTCACAATGG 59.418 38.462 0.00 0.00 31.11 3.16
334 335 6.627395 TGAAGATACGTTTTTCACAATGGT 57.373 33.333 0.00 0.00 0.00 3.55
335 336 6.664515 TGAAGATACGTTTTTCACAATGGTC 58.335 36.000 0.00 0.00 0.00 4.02
336 337 6.485313 TGAAGATACGTTTTTCACAATGGTCT 59.515 34.615 0.00 0.00 0.00 3.85
337 338 6.241207 AGATACGTTTTTCACAATGGTCTG 57.759 37.500 0.00 0.00 0.00 3.51
338 339 3.708563 ACGTTTTTCACAATGGTCTGG 57.291 42.857 0.00 0.00 0.00 3.86
339 340 2.223711 ACGTTTTTCACAATGGTCTGGC 60.224 45.455 0.00 0.00 0.00 4.85
340 341 2.754472 GTTTTTCACAATGGTCTGGCC 58.246 47.619 0.00 0.00 37.90 5.36
341 342 2.365293 GTTTTTCACAATGGTCTGGCCT 59.635 45.455 3.32 0.00 38.35 5.19
342 343 1.619654 TTTCACAATGGTCTGGCCTG 58.380 50.000 3.32 2.92 38.35 4.85
343 344 0.251297 TTCACAATGGTCTGGCCTGG 60.251 55.000 10.07 0.00 38.35 4.45
344 345 2.036256 ACAATGGTCTGGCCTGGC 59.964 61.111 11.05 11.05 38.35 4.85
361 362 3.996621 CCAATGGGCCAGGGTGGT 61.997 66.667 20.34 0.00 40.46 4.16
362 363 2.362889 CAATGGGCCAGGGTGGTC 60.363 66.667 13.78 0.00 42.67 4.02
367 368 4.678743 GGCCAGGGTGGTCCAACC 62.679 72.222 19.36 19.36 42.50 3.77
373 374 3.524346 GGGTGGTCCAACCTCAAAA 57.476 52.632 19.71 0.00 38.38 2.44
374 375 1.783071 GGGTGGTCCAACCTCAAAAA 58.217 50.000 19.71 0.00 38.38 1.94
411 412 8.950007 AATTTTAGAAATTCTAGGTTGGTCCA 57.050 30.769 2.74 0.00 39.02 4.02
412 413 9.547279 AATTTTAGAAATTCTAGGTTGGTCCAT 57.453 29.630 2.74 0.00 39.02 3.41
413 414 7.938140 TTTAGAAATTCTAGGTTGGTCCATG 57.062 36.000 2.74 0.00 39.02 3.66
414 415 4.860022 AGAAATTCTAGGTTGGTCCATGG 58.140 43.478 4.97 4.97 39.02 3.66
415 416 4.540099 AGAAATTCTAGGTTGGTCCATGGA 59.460 41.667 11.44 11.44 39.02 3.41
416 417 3.933861 ATTCTAGGTTGGTCCATGGAC 57.066 47.619 33.14 33.14 43.87 4.02
425 426 3.788672 GTCCATGGACCACCTGATC 57.211 57.895 31.37 5.53 39.08 2.92
426 427 0.181350 GTCCATGGACCACCTGATCC 59.819 60.000 31.37 4.75 39.08 3.36
429 430 3.820425 TGGACCACCTGATCCACC 58.180 61.111 0.00 0.00 40.17 4.61
430 431 1.160870 TGGACCACCTGATCCACCT 59.839 57.895 0.00 0.00 40.17 4.00
431 432 0.909610 TGGACCACCTGATCCACCTC 60.910 60.000 0.00 0.00 40.17 3.85
432 433 1.627297 GGACCACCTGATCCACCTCC 61.627 65.000 0.00 0.00 34.87 4.30
433 434 0.618968 GACCACCTGATCCACCTCCT 60.619 60.000 0.00 0.00 0.00 3.69
434 435 0.716591 ACCACCTGATCCACCTCCTA 59.283 55.000 0.00 0.00 0.00 2.94
435 436 1.343478 ACCACCTGATCCACCTCCTAG 60.343 57.143 0.00 0.00 0.00 3.02
436 437 0.755686 CACCTGATCCACCTCCTAGC 59.244 60.000 0.00 0.00 0.00 3.42
437 438 0.639392 ACCTGATCCACCTCCTAGCT 59.361 55.000 0.00 0.00 0.00 3.32
438 439 1.860240 ACCTGATCCACCTCCTAGCTA 59.140 52.381 0.00 0.00 0.00 3.32
439 440 2.243810 CCTGATCCACCTCCTAGCTAC 58.756 57.143 0.00 0.00 0.00 3.58
440 441 2.424957 CCTGATCCACCTCCTAGCTACA 60.425 54.545 0.00 0.00 0.00 2.74
441 442 2.625790 CTGATCCACCTCCTAGCTACAC 59.374 54.545 0.00 0.00 0.00 2.90
442 443 1.964933 GATCCACCTCCTAGCTACACC 59.035 57.143 0.00 0.00 0.00 4.16
443 444 0.032416 TCCACCTCCTAGCTACACCC 60.032 60.000 0.00 0.00 0.00 4.61
444 445 1.049289 CCACCTCCTAGCTACACCCC 61.049 65.000 0.00 0.00 0.00 4.95
445 446 0.032017 CACCTCCTAGCTACACCCCT 60.032 60.000 0.00 0.00 0.00 4.79
446 447 0.032017 ACCTCCTAGCTACACCCCTG 60.032 60.000 0.00 0.00 0.00 4.45
447 448 0.032017 CCTCCTAGCTACACCCCTGT 60.032 60.000 0.00 0.00 0.00 4.00
448 449 1.622725 CCTCCTAGCTACACCCCTGTT 60.623 57.143 0.00 0.00 0.00 3.16
449 450 2.188817 CTCCTAGCTACACCCCTGTTT 58.811 52.381 0.00 0.00 0.00 2.83
450 451 2.572104 CTCCTAGCTACACCCCTGTTTT 59.428 50.000 0.00 0.00 0.00 2.43
451 452 2.570302 TCCTAGCTACACCCCTGTTTTC 59.430 50.000 0.00 0.00 0.00 2.29
452 453 2.304761 CCTAGCTACACCCCTGTTTTCA 59.695 50.000 0.00 0.00 0.00 2.69
453 454 3.054361 CCTAGCTACACCCCTGTTTTCAT 60.054 47.826 0.00 0.00 0.00 2.57
454 455 3.073274 AGCTACACCCCTGTTTTCATC 57.927 47.619 0.00 0.00 0.00 2.92
455 456 2.092323 GCTACACCCCTGTTTTCATCC 58.908 52.381 0.00 0.00 0.00 3.51
456 457 2.723273 CTACACCCCTGTTTTCATCCC 58.277 52.381 0.00 0.00 0.00 3.85
457 458 0.856982 ACACCCCTGTTTTCATCCCA 59.143 50.000 0.00 0.00 0.00 4.37
458 459 1.432807 ACACCCCTGTTTTCATCCCAT 59.567 47.619 0.00 0.00 0.00 4.00
459 460 2.652348 ACACCCCTGTTTTCATCCCATA 59.348 45.455 0.00 0.00 0.00 2.74
460 461 3.076785 ACACCCCTGTTTTCATCCCATAA 59.923 43.478 0.00 0.00 0.00 1.90
461 462 4.264804 ACACCCCTGTTTTCATCCCATAAT 60.265 41.667 0.00 0.00 0.00 1.28
462 463 4.099881 CACCCCTGTTTTCATCCCATAATG 59.900 45.833 0.00 0.00 0.00 1.90
463 464 4.016666 ACCCCTGTTTTCATCCCATAATGA 60.017 41.667 0.00 0.00 33.88 2.57
464 465 4.961730 CCCCTGTTTTCATCCCATAATGAA 59.038 41.667 0.00 0.00 42.42 2.57
522 523 8.939201 TGACATTGTTTTAAAATGCTCTTCAA 57.061 26.923 3.52 2.48 38.36 2.69
523 524 9.376075 TGACATTGTTTTAAAATGCTCTTCAAA 57.624 25.926 3.52 0.00 38.36 2.69
685 686 0.315886 AATACGGTCACTGTGCGTCA 59.684 50.000 14.98 5.18 0.00 4.35
825 829 1.687297 GGACAGATCCCCGAAGTCCC 61.687 65.000 0.00 0.00 42.21 4.46
898 904 3.692406 GGCGGAGAAGGTGACGGT 61.692 66.667 0.00 0.00 0.00 4.83
1020 1072 2.282958 TCTCCTGTTCGTCGCCCT 60.283 61.111 0.00 0.00 0.00 5.19
1052 1105 1.002315 TGCCCCTGTTTACCGTAAGTC 59.998 52.381 0.00 0.00 0.00 3.01
1173 1228 6.726764 TGTATGGCAATTTAGGTTTAGGGTTT 59.273 34.615 0.00 0.00 0.00 3.27
1177 1232 6.099845 TGGCAATTTAGGTTTAGGGTTTTTCA 59.900 34.615 0.00 0.00 0.00 2.69
1223 1278 8.105197 GGTTTCTGATAGGGTTTTAGGTTCTTA 58.895 37.037 0.00 0.00 0.00 2.10
1277 1369 5.789643 TGAAATATGCTTTGGAATAGGCC 57.210 39.130 0.00 0.00 0.00 5.19
1289 1381 3.053917 TGGAATAGGCCTAGGTTTTGGAC 60.054 47.826 19.33 1.49 0.00 4.02
1476 1574 5.739143 AGGGCTTATATTGATGGGCATAT 57.261 39.130 0.00 0.00 0.00 1.78
1491 1589 6.007485 TGGGCATATAGTTTGGTATGACAA 57.993 37.500 1.19 0.00 37.93 3.18
1689 1787 7.283127 TCTGTCTATTGGGCATCATTTCTTTAC 59.717 37.037 0.00 0.00 0.00 2.01
1801 1899 2.711542 AGCCCTTCAAAAGATGGTACG 58.288 47.619 0.00 0.00 0.00 3.67
1803 1907 3.054361 AGCCCTTCAAAAGATGGTACGAT 60.054 43.478 0.00 0.00 0.00 3.73
1805 1909 4.157840 GCCCTTCAAAAGATGGTACGATTT 59.842 41.667 0.00 0.00 0.00 2.17
1812 1916 8.420374 TCAAAAGATGGTACGATTTCTCATAC 57.580 34.615 0.00 0.00 0.00 2.39
1948 2059 1.434188 TTGGTGAAGGAGCAGAGGAA 58.566 50.000 0.00 0.00 32.41 3.36
1979 2090 0.825010 ACAAGGACAAGCAGGGCAAG 60.825 55.000 0.00 0.00 0.00 4.01
1980 2091 1.905354 AAGGACAAGCAGGGCAAGC 60.905 57.895 0.00 0.00 0.00 4.01
1981 2092 2.598394 GGACAAGCAGGGCAAGCA 60.598 61.111 3.26 0.00 0.00 3.91
1982 2093 2.633509 GGACAAGCAGGGCAAGCAG 61.634 63.158 3.26 0.00 0.00 4.24
1983 2094 1.601759 GACAAGCAGGGCAAGCAGA 60.602 57.895 3.26 0.00 0.00 4.26
1984 2095 1.584380 GACAAGCAGGGCAAGCAGAG 61.584 60.000 3.26 0.00 0.00 3.35
1985 2096 2.675772 AAGCAGGGCAAGCAGAGC 60.676 61.111 3.26 0.00 0.00 4.09
1986 2097 3.502621 AAGCAGGGCAAGCAGAGCA 62.503 57.895 3.26 0.00 0.00 4.26
1987 2098 2.754658 GCAGGGCAAGCAGAGCAT 60.755 61.111 0.00 0.00 0.00 3.79
1988 2099 3.064987 GCAGGGCAAGCAGAGCATG 62.065 63.158 0.00 0.00 0.00 4.06
1989 2100 1.677966 CAGGGCAAGCAGAGCATGT 60.678 57.895 0.00 0.00 29.47 3.21
1990 2101 0.393402 CAGGGCAAGCAGAGCATGTA 60.393 55.000 0.00 0.00 29.47 2.29
1991 2102 0.107312 AGGGCAAGCAGAGCATGTAG 60.107 55.000 0.00 0.00 29.47 2.74
1992 2103 1.099879 GGGCAAGCAGAGCATGTAGG 61.100 60.000 0.00 0.00 29.47 3.18
1993 2104 1.722636 GGCAAGCAGAGCATGTAGGC 61.723 60.000 0.00 0.00 29.47 3.93
1996 2107 0.329261 AAGCAGAGCATGTAGGCCAA 59.671 50.000 5.01 0.00 0.00 4.52
2043 2154 2.093288 CAGAGCATGTAGGCCAAGAAGA 60.093 50.000 5.01 0.00 0.00 2.87
2063 2219 2.574006 AGAAGCAGAGCCACATGAAA 57.426 45.000 0.00 0.00 0.00 2.69
2066 2222 3.442977 AGAAGCAGAGCCACATGAAAATC 59.557 43.478 0.00 0.00 0.00 2.17
2086 2242 2.495270 TCCAGAGCAAGTAGAGCAAGAG 59.505 50.000 0.00 0.00 0.00 2.85
2100 2268 3.430453 AGCAAGAGAGAGAAGCAGTAGT 58.570 45.455 0.00 0.00 0.00 2.73
2216 2385 4.701651 GTGATTTTGATCCTGGTGACATGA 59.298 41.667 0.00 0.00 41.51 3.07
2276 2451 5.754782 ACCTTTATGCTGACAATGTGGATA 58.245 37.500 0.00 0.00 0.00 2.59
2366 2547 5.144159 AGGGGAAGAAAAGGAAGAAAACT 57.856 39.130 0.00 0.00 0.00 2.66
2472 2653 2.836981 AGGAGGATCTGACTTGTCCAAG 59.163 50.000 5.51 5.51 38.80 3.61
2565 2746 9.429359 CAAGAATAGAGTTGATGTCAAGTTACT 57.571 33.333 4.70 1.89 39.43 2.24
2614 2795 6.940739 AGCAGTCTGTGATAAAGATTGTACT 58.059 36.000 0.93 0.00 34.74 2.73
2650 2831 4.142730 GCTTCTTATGACAGCAGAACCAAG 60.143 45.833 0.00 0.00 33.45 3.61
2652 2833 4.973168 TCTTATGACAGCAGAACCAAGTT 58.027 39.130 0.00 0.00 0.00 2.66
3016 3210 0.899019 TGTGCCTTGATGCATGCAAT 59.101 45.000 26.68 13.38 44.30 3.56
3330 3535 7.441890 TGAGAACACTTGTTTAACACTTTGA 57.558 32.000 0.00 0.00 38.56 2.69
3639 3844 5.400485 GTGTGACATTCTGCTCAACAATTTC 59.600 40.000 0.00 0.00 0.00 2.17
3854 4062 3.871463 GCATTGTGAGGGTGAGAAGATGT 60.871 47.826 0.00 0.00 0.00 3.06
4054 4262 6.586344 AGTGACTTGCATACATGTTATAGCT 58.414 36.000 2.30 0.00 34.54 3.32
4065 4273 8.982685 CATACATGTTATAGCTTGTTGTAGGAG 58.017 37.037 2.30 0.00 0.00 3.69
4191 4399 1.478288 GGAGAAGATGAATGGGCCTGG 60.478 57.143 4.53 0.00 0.00 4.45
4457 4666 5.009631 ACAAGCTAATATGGAGCAACAACA 58.990 37.500 11.40 0.00 42.69 3.33
4465 4674 0.668535 GGAGCAACAACAACCTCCAC 59.331 55.000 0.00 0.00 42.66 4.02
4518 4744 4.770010 ACCTCTAGCACATCTTATAGAGCC 59.230 45.833 3.14 0.00 39.84 4.70
4519 4745 4.159506 CCTCTAGCACATCTTATAGAGCCC 59.840 50.000 3.14 0.00 39.84 5.19
4520 4746 4.740902 TCTAGCACATCTTATAGAGCCCA 58.259 43.478 0.00 0.00 0.00 5.36
4605 4835 7.921041 AGTAGAAGATCTTATGGTGGATCAA 57.079 36.000 12.86 0.00 40.32 2.57
4654 4904 6.473758 TGAGTACTCTTAGTCACTTGCTCTA 58.526 40.000 23.01 0.00 33.42 2.43
4725 4993 2.170607 ACATGTGTATGTACAGAGGCCC 59.829 50.000 0.00 0.00 45.45 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.254903 GTCACTCGCCCAAATAGGTTTTT 59.745 43.478 0.00 0.00 34.66 1.94
18 19 2.817844 GTCACTCGCCCAAATAGGTTTT 59.182 45.455 0.00 0.00 34.66 2.43
19 20 2.433436 GTCACTCGCCCAAATAGGTTT 58.567 47.619 0.00 0.00 34.66 3.27
20 21 1.339727 GGTCACTCGCCCAAATAGGTT 60.340 52.381 0.00 0.00 34.66 3.50
21 22 0.252197 GGTCACTCGCCCAAATAGGT 59.748 55.000 0.00 0.00 34.66 3.08
22 23 0.541863 AGGTCACTCGCCCAAATAGG 59.458 55.000 0.00 0.00 37.03 2.57
23 24 3.536956 TTAGGTCACTCGCCCAAATAG 57.463 47.619 0.00 0.00 0.00 1.73
24 25 3.262405 ACTTTAGGTCACTCGCCCAAATA 59.738 43.478 0.00 0.00 0.00 1.40
25 26 2.039879 ACTTTAGGTCACTCGCCCAAAT 59.960 45.455 0.00 0.00 0.00 2.32
26 27 1.418637 ACTTTAGGTCACTCGCCCAAA 59.581 47.619 0.00 0.00 0.00 3.28
27 28 1.053424 ACTTTAGGTCACTCGCCCAA 58.947 50.000 0.00 0.00 0.00 4.12
28 29 0.320374 CACTTTAGGTCACTCGCCCA 59.680 55.000 0.00 0.00 0.00 5.36
29 30 0.320697 ACACTTTAGGTCACTCGCCC 59.679 55.000 0.00 0.00 0.00 6.13
30 31 2.165319 AACACTTTAGGTCACTCGCC 57.835 50.000 0.00 0.00 0.00 5.54
31 32 4.034742 TGAAAAACACTTTAGGTCACTCGC 59.965 41.667 0.00 0.00 0.00 5.03
32 33 5.728351 TGAAAAACACTTTAGGTCACTCG 57.272 39.130 0.00 0.00 0.00 4.18
33 34 8.169839 GTTTTGAAAAACACTTTAGGTCACTC 57.830 34.615 12.61 0.00 45.72 3.51
47 48 7.148540 GGACTAACACCAAAGGTTTTGAAAAAC 60.149 37.037 9.66 9.66 45.70 2.43
48 49 6.874664 GGACTAACACCAAAGGTTTTGAAAAA 59.125 34.615 3.24 0.00 31.02 1.94
49 50 6.014499 TGGACTAACACCAAAGGTTTTGAAAA 60.014 34.615 3.24 0.00 31.02 2.29
50 51 5.480772 TGGACTAACACCAAAGGTTTTGAAA 59.519 36.000 3.24 0.00 31.02 2.69
51 52 5.017490 TGGACTAACACCAAAGGTTTTGAA 58.983 37.500 3.24 0.00 31.02 2.69
52 53 4.601084 TGGACTAACACCAAAGGTTTTGA 58.399 39.130 3.24 0.00 31.02 2.69
53 54 4.993029 TGGACTAACACCAAAGGTTTTG 57.007 40.909 0.00 0.00 31.02 2.44
54 55 7.663043 TTTATGGACTAACACCAAAGGTTTT 57.337 32.000 0.00 0.00 40.93 2.43
55 56 7.666623 CATTTATGGACTAACACCAAAGGTTT 58.333 34.615 0.00 0.00 40.93 3.27
56 57 6.295067 GCATTTATGGACTAACACCAAAGGTT 60.295 38.462 0.00 0.00 40.93 3.50
57 58 5.185056 GCATTTATGGACTAACACCAAAGGT 59.815 40.000 0.00 0.00 40.93 3.50
58 59 5.418840 AGCATTTATGGACTAACACCAAAGG 59.581 40.000 0.00 0.00 40.93 3.11
59 60 6.515272 AGCATTTATGGACTAACACCAAAG 57.485 37.500 0.00 0.00 40.93 2.77
60 61 6.295011 CCAAGCATTTATGGACTAACACCAAA 60.295 38.462 0.00 0.00 40.93 3.28
61 62 5.184864 CCAAGCATTTATGGACTAACACCAA 59.815 40.000 0.00 0.00 40.93 3.67
62 63 4.704540 CCAAGCATTTATGGACTAACACCA 59.295 41.667 0.00 0.00 39.12 4.17
63 64 4.705023 ACCAAGCATTTATGGACTAACACC 59.295 41.667 0.00 0.00 39.12 4.16
64 65 5.447279 CGACCAAGCATTTATGGACTAACAC 60.447 44.000 0.00 0.00 39.12 3.32
65 66 4.634004 CGACCAAGCATTTATGGACTAACA 59.366 41.667 0.00 0.00 39.12 2.41
66 67 4.634443 ACGACCAAGCATTTATGGACTAAC 59.366 41.667 0.00 0.00 39.12 2.34
67 68 4.839121 ACGACCAAGCATTTATGGACTAA 58.161 39.130 0.00 0.00 39.12 2.24
68 69 4.161565 AGACGACCAAGCATTTATGGACTA 59.838 41.667 0.00 0.00 39.12 2.59
69 70 3.055094 AGACGACCAAGCATTTATGGACT 60.055 43.478 0.00 0.00 39.12 3.85
70 71 3.063997 CAGACGACCAAGCATTTATGGAC 59.936 47.826 0.00 0.00 39.12 4.02
71 72 3.270027 CAGACGACCAAGCATTTATGGA 58.730 45.455 0.00 0.00 39.12 3.41
72 73 3.009723 ACAGACGACCAAGCATTTATGG 58.990 45.455 0.00 0.00 42.60 2.74
73 74 4.083324 ACAACAGACGACCAAGCATTTATG 60.083 41.667 0.00 0.00 0.00 1.90
74 75 4.072131 ACAACAGACGACCAAGCATTTAT 58.928 39.130 0.00 0.00 0.00 1.40
75 76 3.249799 CACAACAGACGACCAAGCATTTA 59.750 43.478 0.00 0.00 0.00 1.40
76 77 2.033299 CACAACAGACGACCAAGCATTT 59.967 45.455 0.00 0.00 0.00 2.32
77 78 1.603802 CACAACAGACGACCAAGCATT 59.396 47.619 0.00 0.00 0.00 3.56
78 79 1.229428 CACAACAGACGACCAAGCAT 58.771 50.000 0.00 0.00 0.00 3.79
79 80 0.107897 ACACAACAGACGACCAAGCA 60.108 50.000 0.00 0.00 0.00 3.91
80 81 1.014352 AACACAACAGACGACCAAGC 58.986 50.000 0.00 0.00 0.00 4.01
81 82 3.757745 AAAACACAACAGACGACCAAG 57.242 42.857 0.00 0.00 0.00 3.61
101 102 5.438698 TTCCCACTATGATCCCGTAAAAA 57.561 39.130 0.00 0.00 0.00 1.94
102 103 5.045432 AGTTTCCCACTATGATCCCGTAAAA 60.045 40.000 0.00 0.00 31.97 1.52
103 104 4.472108 AGTTTCCCACTATGATCCCGTAAA 59.528 41.667 0.00 0.00 31.97 2.01
104 105 4.035112 AGTTTCCCACTATGATCCCGTAA 58.965 43.478 0.00 0.00 31.97 3.18
105 106 3.649843 AGTTTCCCACTATGATCCCGTA 58.350 45.455 0.00 0.00 31.97 4.02
106 107 2.478292 AGTTTCCCACTATGATCCCGT 58.522 47.619 0.00 0.00 31.97 5.28
107 108 3.006967 CCTAGTTTCCCACTATGATCCCG 59.993 52.174 0.00 0.00 37.36 5.14
108 109 3.974642 ACCTAGTTTCCCACTATGATCCC 59.025 47.826 0.00 0.00 37.36 3.85
109 110 5.278858 CGTACCTAGTTTCCCACTATGATCC 60.279 48.000 0.00 0.00 37.36 3.36
110 111 5.533903 TCGTACCTAGTTTCCCACTATGATC 59.466 44.000 0.00 0.00 37.36 2.92
111 112 5.452255 TCGTACCTAGTTTCCCACTATGAT 58.548 41.667 0.00 0.00 37.36 2.45
112 113 4.858850 TCGTACCTAGTTTCCCACTATGA 58.141 43.478 0.00 0.00 37.36 2.15
113 114 5.587388 TTCGTACCTAGTTTCCCACTATG 57.413 43.478 0.00 0.00 37.36 2.23
114 115 6.212187 ACTTTTCGTACCTAGTTTCCCACTAT 59.788 38.462 0.00 0.00 37.36 2.12
115 116 5.539955 ACTTTTCGTACCTAGTTTCCCACTA 59.460 40.000 0.00 0.00 36.88 2.74
116 117 4.346127 ACTTTTCGTACCTAGTTTCCCACT 59.654 41.667 0.00 0.00 39.87 4.00
117 118 4.450080 CACTTTTCGTACCTAGTTTCCCAC 59.550 45.833 0.00 0.00 0.00 4.61
118 119 4.344679 TCACTTTTCGTACCTAGTTTCCCA 59.655 41.667 0.00 0.00 0.00 4.37
119 120 4.886579 TCACTTTTCGTACCTAGTTTCCC 58.113 43.478 0.00 0.00 0.00 3.97
120 121 5.107182 GCTTCACTTTTCGTACCTAGTTTCC 60.107 44.000 0.00 0.00 0.00 3.13
121 122 5.464389 TGCTTCACTTTTCGTACCTAGTTTC 59.536 40.000 0.00 0.00 0.00 2.78
122 123 5.362263 TGCTTCACTTTTCGTACCTAGTTT 58.638 37.500 0.00 0.00 0.00 2.66
123 124 4.952460 TGCTTCACTTTTCGTACCTAGTT 58.048 39.130 0.00 0.00 0.00 2.24
124 125 4.595762 TGCTTCACTTTTCGTACCTAGT 57.404 40.909 0.00 0.00 0.00 2.57
125 126 4.748102 TGTTGCTTCACTTTTCGTACCTAG 59.252 41.667 0.00 0.00 0.00 3.02
126 127 4.695396 TGTTGCTTCACTTTTCGTACCTA 58.305 39.130 0.00 0.00 0.00 3.08
127 128 3.537580 TGTTGCTTCACTTTTCGTACCT 58.462 40.909 0.00 0.00 0.00 3.08
128 129 3.955771 TGTTGCTTCACTTTTCGTACC 57.044 42.857 0.00 0.00 0.00 3.34
129 130 5.564127 GCTAATGTTGCTTCACTTTTCGTAC 59.436 40.000 0.00 0.00 0.00 3.67
130 131 5.237561 TGCTAATGTTGCTTCACTTTTCGTA 59.762 36.000 0.00 0.00 0.00 3.43
131 132 4.036262 TGCTAATGTTGCTTCACTTTTCGT 59.964 37.500 0.00 0.00 0.00 3.85
132 133 4.379793 GTGCTAATGTTGCTTCACTTTTCG 59.620 41.667 0.00 0.00 0.00 3.46
133 134 5.280945 TGTGCTAATGTTGCTTCACTTTTC 58.719 37.500 0.00 0.00 0.00 2.29
134 135 5.261209 TGTGCTAATGTTGCTTCACTTTT 57.739 34.783 0.00 0.00 0.00 2.27
135 136 4.916983 TGTGCTAATGTTGCTTCACTTT 57.083 36.364 0.00 0.00 0.00 2.66
136 137 4.763793 AGATGTGCTAATGTTGCTTCACTT 59.236 37.500 0.00 0.00 0.00 3.16
137 138 4.330250 AGATGTGCTAATGTTGCTTCACT 58.670 39.130 0.00 0.00 0.00 3.41
138 139 4.437930 GGAGATGTGCTAATGTTGCTTCAC 60.438 45.833 0.00 0.00 0.00 3.18
139 140 3.691118 GGAGATGTGCTAATGTTGCTTCA 59.309 43.478 0.00 0.00 0.00 3.02
140 141 3.242543 CGGAGATGTGCTAATGTTGCTTC 60.243 47.826 0.00 0.00 0.00 3.86
141 142 2.679837 CGGAGATGTGCTAATGTTGCTT 59.320 45.455 0.00 0.00 0.00 3.91
142 143 2.093500 TCGGAGATGTGCTAATGTTGCT 60.093 45.455 0.00 0.00 0.00 3.91
143 144 2.030946 GTCGGAGATGTGCTAATGTTGC 59.969 50.000 0.00 0.00 40.67 4.17
144 145 2.609459 GGTCGGAGATGTGCTAATGTTG 59.391 50.000 0.00 0.00 40.67 3.33
145 146 2.501723 AGGTCGGAGATGTGCTAATGTT 59.498 45.455 0.00 0.00 40.67 2.71
146 147 2.101582 GAGGTCGGAGATGTGCTAATGT 59.898 50.000 0.00 0.00 40.67 2.71
147 148 2.363680 AGAGGTCGGAGATGTGCTAATG 59.636 50.000 0.00 0.00 40.67 1.90
148 149 2.672098 AGAGGTCGGAGATGTGCTAAT 58.328 47.619 0.00 0.00 40.67 1.73
149 150 2.145397 AGAGGTCGGAGATGTGCTAA 57.855 50.000 0.00 0.00 40.67 3.09
150 151 2.025155 GAAGAGGTCGGAGATGTGCTA 58.975 52.381 0.00 0.00 40.67 3.49
151 152 0.820871 GAAGAGGTCGGAGATGTGCT 59.179 55.000 0.00 0.00 40.67 4.40
152 153 0.820871 AGAAGAGGTCGGAGATGTGC 59.179 55.000 0.00 0.00 40.67 4.57
153 154 3.257393 CAAAGAAGAGGTCGGAGATGTG 58.743 50.000 0.00 0.00 40.67 3.21
154 155 2.354203 GCAAAGAAGAGGTCGGAGATGT 60.354 50.000 0.00 0.00 40.67 3.06
155 156 2.275318 GCAAAGAAGAGGTCGGAGATG 58.725 52.381 0.00 0.00 40.67 2.90
156 157 1.902508 TGCAAAGAAGAGGTCGGAGAT 59.097 47.619 0.00 0.00 40.67 2.75
157 158 1.273606 CTGCAAAGAAGAGGTCGGAGA 59.726 52.381 0.00 0.00 0.00 3.71
158 159 1.719600 CTGCAAAGAAGAGGTCGGAG 58.280 55.000 0.00 0.00 0.00 4.63
159 160 0.320771 GCTGCAAAGAAGAGGTCGGA 60.321 55.000 0.00 0.00 0.00 4.55
160 161 0.321122 AGCTGCAAAGAAGAGGTCGG 60.321 55.000 1.02 0.00 0.00 4.79
161 162 1.517242 AAGCTGCAAAGAAGAGGTCG 58.483 50.000 1.02 0.00 0.00 4.79
162 163 2.620585 ACAAAGCTGCAAAGAAGAGGTC 59.379 45.455 1.02 0.00 0.00 3.85
163 164 2.360165 CACAAAGCTGCAAAGAAGAGGT 59.640 45.455 1.02 0.00 0.00 3.85
164 165 2.288030 CCACAAAGCTGCAAAGAAGAGG 60.288 50.000 1.02 0.00 0.00 3.69
165 166 2.620115 TCCACAAAGCTGCAAAGAAGAG 59.380 45.455 1.02 0.00 0.00 2.85
166 167 2.358898 GTCCACAAAGCTGCAAAGAAGA 59.641 45.455 1.02 0.00 0.00 2.87
167 168 2.544486 GGTCCACAAAGCTGCAAAGAAG 60.544 50.000 1.02 0.00 0.00 2.85
168 169 1.408702 GGTCCACAAAGCTGCAAAGAA 59.591 47.619 1.02 0.00 0.00 2.52
169 170 1.032014 GGTCCACAAAGCTGCAAAGA 58.968 50.000 1.02 0.00 0.00 2.52
170 171 0.746063 TGGTCCACAAAGCTGCAAAG 59.254 50.000 1.02 0.00 0.00 2.77
171 172 1.134848 GTTGGTCCACAAAGCTGCAAA 60.135 47.619 1.02 0.00 41.58 3.68
172 173 0.459489 GTTGGTCCACAAAGCTGCAA 59.541 50.000 1.02 0.00 41.58 4.08
173 174 1.391157 GGTTGGTCCACAAAGCTGCA 61.391 55.000 1.02 0.00 41.58 4.41
174 175 1.363807 GGTTGGTCCACAAAGCTGC 59.636 57.895 0.00 0.00 41.58 5.25
175 176 0.754957 TGGGTTGGTCCACAAAGCTG 60.755 55.000 0.00 0.00 41.58 4.24
176 177 0.188342 ATGGGTTGGTCCACAAAGCT 59.812 50.000 0.00 0.00 41.58 3.74
177 178 0.603065 GATGGGTTGGTCCACAAAGC 59.397 55.000 0.00 0.00 41.58 3.51
178 179 1.993956 TGATGGGTTGGTCCACAAAG 58.006 50.000 0.00 0.00 41.58 2.77
179 180 2.461300 TTGATGGGTTGGTCCACAAA 57.539 45.000 0.00 0.00 41.58 2.83
180 181 2.246469 CATTGATGGGTTGGTCCACAA 58.754 47.619 0.00 0.00 39.97 3.33
181 182 1.146774 ACATTGATGGGTTGGTCCACA 59.853 47.619 0.00 0.00 39.97 4.17
182 183 1.923356 ACATTGATGGGTTGGTCCAC 58.077 50.000 0.00 0.00 39.97 4.02
183 184 2.246469 CAACATTGATGGGTTGGTCCA 58.754 47.619 0.00 0.00 40.44 4.02
184 185 2.029110 CACAACATTGATGGGTTGGTCC 60.029 50.000 9.06 0.00 46.56 4.46
185 186 2.627699 ACACAACATTGATGGGTTGGTC 59.372 45.455 9.06 0.00 46.56 4.02
186 187 2.364970 CACACAACATTGATGGGTTGGT 59.635 45.455 0.00 2.25 46.56 3.67
187 188 2.867251 GCACACAACATTGATGGGTTGG 60.867 50.000 0.00 0.00 46.56 3.77
189 190 1.344114 GGCACACAACATTGATGGGTT 59.656 47.619 0.00 0.00 30.32 4.11
190 191 0.968405 GGCACACAACATTGATGGGT 59.032 50.000 0.00 0.00 33.88 4.51
191 192 0.247185 GGGCACACAACATTGATGGG 59.753 55.000 0.00 0.00 0.00 4.00
192 193 0.109179 CGGGCACACAACATTGATGG 60.109 55.000 0.00 0.00 0.00 3.51
193 194 0.109179 CCGGGCACACAACATTGATG 60.109 55.000 0.00 0.00 0.00 3.07
194 195 0.539438 ACCGGGCACACAACATTGAT 60.539 50.000 6.32 0.00 0.00 2.57
195 196 1.152860 ACCGGGCACACAACATTGA 60.153 52.632 6.32 0.00 0.00 2.57
196 197 1.007502 CACCGGGCACACAACATTG 60.008 57.895 6.32 0.00 0.00 2.82
197 198 1.040339 AACACCGGGCACACAACATT 61.040 50.000 6.32 0.00 0.00 2.71
198 199 1.452145 GAACACCGGGCACACAACAT 61.452 55.000 6.32 0.00 0.00 2.71
199 200 2.044848 AACACCGGGCACACAACA 60.045 55.556 6.32 0.00 0.00 3.33
200 201 2.719354 GAACACCGGGCACACAAC 59.281 61.111 6.32 0.00 0.00 3.32
201 202 1.697082 TAGGAACACCGGGCACACAA 61.697 55.000 6.32 0.00 0.00 3.33
202 203 1.697082 TTAGGAACACCGGGCACACA 61.697 55.000 6.32 0.00 0.00 3.72
203 204 0.322187 ATTAGGAACACCGGGCACAC 60.322 55.000 6.32 0.00 0.00 3.82
204 205 1.277579 TATTAGGAACACCGGGCACA 58.722 50.000 6.32 0.00 0.00 4.57
205 206 2.632987 ATATTAGGAACACCGGGCAC 57.367 50.000 6.32 0.00 0.00 5.01
206 207 3.283751 CAAATATTAGGAACACCGGGCA 58.716 45.455 6.32 0.00 0.00 5.36
207 208 2.034179 GCAAATATTAGGAACACCGGGC 59.966 50.000 6.32 0.00 0.00 6.13
208 209 3.066203 GTGCAAATATTAGGAACACCGGG 59.934 47.826 6.32 0.00 0.00 5.73
209 210 3.945285 AGTGCAAATATTAGGAACACCGG 59.055 43.478 0.00 0.00 0.00 5.28
210 211 5.560966 AAGTGCAAATATTAGGAACACCG 57.439 39.130 0.00 0.00 0.00 4.94
211 212 6.687604 ACAAAGTGCAAATATTAGGAACACC 58.312 36.000 0.00 0.00 0.00 4.16
212 213 8.726988 TCTACAAAGTGCAAATATTAGGAACAC 58.273 33.333 0.00 0.00 0.00 3.32
213 214 8.856153 TCTACAAAGTGCAAATATTAGGAACA 57.144 30.769 0.00 0.00 0.00 3.18
269 270 8.450578 TGTGAATTTGTTCTAAGAACATGTCT 57.549 30.769 0.00 0.00 38.69 3.41
270 271 9.683069 AATGTGAATTTGTTCTAAGAACATGTC 57.317 29.630 0.00 0.00 0.00 3.06
276 277 9.672086 CCGTTAAATGTGAATTTGTTCTAAGAA 57.328 29.630 0.00 0.00 0.00 2.52
277 278 9.058174 TCCGTTAAATGTGAATTTGTTCTAAGA 57.942 29.630 0.00 0.00 0.00 2.10
278 279 9.840427 ATCCGTTAAATGTGAATTTGTTCTAAG 57.160 29.630 0.00 0.00 0.00 2.18
281 282 9.541143 AAAATCCGTTAAATGTGAATTTGTTCT 57.459 25.926 0.00 0.00 0.00 3.01
282 283 9.791838 GAAAATCCGTTAAATGTGAATTTGTTC 57.208 29.630 0.00 0.00 0.00 3.18
283 284 8.769891 GGAAAATCCGTTAAATGTGAATTTGTT 58.230 29.630 0.00 0.00 0.00 2.83
284 285 8.147704 AGGAAAATCCGTTAAATGTGAATTTGT 58.852 29.630 0.00 0.00 42.75 2.83
285 286 8.532977 AGGAAAATCCGTTAAATGTGAATTTG 57.467 30.769 0.00 0.00 42.75 2.32
286 287 8.987890 CAAGGAAAATCCGTTAAATGTGAATTT 58.012 29.630 0.00 0.00 42.75 1.82
287 288 8.364142 TCAAGGAAAATCCGTTAAATGTGAATT 58.636 29.630 0.00 0.00 42.75 2.17
288 289 7.891561 TCAAGGAAAATCCGTTAAATGTGAAT 58.108 30.769 0.00 0.00 42.75 2.57
289 290 7.278461 TCAAGGAAAATCCGTTAAATGTGAA 57.722 32.000 0.00 0.00 42.75 3.18
290 291 6.885952 TCAAGGAAAATCCGTTAAATGTGA 57.114 33.333 0.00 0.00 42.75 3.58
291 292 7.367285 TCTTCAAGGAAAATCCGTTAAATGTG 58.633 34.615 0.00 0.00 42.75 3.21
292 293 7.519032 TCTTCAAGGAAAATCCGTTAAATGT 57.481 32.000 0.00 0.00 42.75 2.71
293 294 9.503427 GTATCTTCAAGGAAAATCCGTTAAATG 57.497 33.333 0.00 0.00 42.75 2.32
294 295 8.395633 CGTATCTTCAAGGAAAATCCGTTAAAT 58.604 33.333 0.00 0.00 42.75 1.40
295 296 7.388500 ACGTATCTTCAAGGAAAATCCGTTAAA 59.612 33.333 0.00 0.00 42.75 1.52
296 297 6.875195 ACGTATCTTCAAGGAAAATCCGTTAA 59.125 34.615 0.00 0.00 42.75 2.01
297 298 6.400568 ACGTATCTTCAAGGAAAATCCGTTA 58.599 36.000 0.00 0.00 42.75 3.18
298 299 5.243207 ACGTATCTTCAAGGAAAATCCGTT 58.757 37.500 0.00 0.00 42.75 4.44
299 300 4.828829 ACGTATCTTCAAGGAAAATCCGT 58.171 39.130 0.00 0.00 42.75 4.69
300 301 5.796350 AACGTATCTTCAAGGAAAATCCG 57.204 39.130 0.00 0.00 42.75 4.18
301 302 8.079809 TGAAAAACGTATCTTCAAGGAAAATCC 58.920 33.333 4.84 0.00 36.58 3.01
302 303 8.902735 GTGAAAAACGTATCTTCAAGGAAAATC 58.097 33.333 8.07 0.00 31.21 2.17
303 304 8.410141 TGTGAAAAACGTATCTTCAAGGAAAAT 58.590 29.630 8.07 0.00 31.21 1.82
304 305 7.763356 TGTGAAAAACGTATCTTCAAGGAAAA 58.237 30.769 8.07 0.00 31.21 2.29
305 306 7.323049 TGTGAAAAACGTATCTTCAAGGAAA 57.677 32.000 8.07 0.00 31.21 3.13
306 307 6.928979 TGTGAAAAACGTATCTTCAAGGAA 57.071 33.333 8.07 0.00 31.21 3.36
307 308 6.928979 TTGTGAAAAACGTATCTTCAAGGA 57.071 33.333 8.07 0.00 31.21 3.36
308 309 6.582295 CCATTGTGAAAAACGTATCTTCAAGG 59.418 38.462 8.07 8.93 31.21 3.61
309 310 7.138736 ACCATTGTGAAAAACGTATCTTCAAG 58.861 34.615 8.07 0.00 31.21 3.02
310 311 7.012894 AGACCATTGTGAAAAACGTATCTTCAA 59.987 33.333 8.07 8.21 31.21 2.69
311 312 6.485313 AGACCATTGTGAAAAACGTATCTTCA 59.515 34.615 0.00 0.00 0.00 3.02
312 313 6.797033 CAGACCATTGTGAAAAACGTATCTTC 59.203 38.462 0.00 0.00 0.00 2.87
313 314 6.293955 CCAGACCATTGTGAAAAACGTATCTT 60.294 38.462 0.00 0.00 0.00 2.40
314 315 5.181245 CCAGACCATTGTGAAAAACGTATCT 59.819 40.000 0.00 0.00 0.00 1.98
315 316 5.390613 CCAGACCATTGTGAAAAACGTATC 58.609 41.667 0.00 0.00 0.00 2.24
316 317 4.320935 GCCAGACCATTGTGAAAAACGTAT 60.321 41.667 0.00 0.00 0.00 3.06
317 318 3.003897 GCCAGACCATTGTGAAAAACGTA 59.996 43.478 0.00 0.00 0.00 3.57
318 319 2.223711 GCCAGACCATTGTGAAAAACGT 60.224 45.455 0.00 0.00 0.00 3.99
319 320 2.393764 GCCAGACCATTGTGAAAAACG 58.606 47.619 0.00 0.00 0.00 3.60
320 321 2.365293 AGGCCAGACCATTGTGAAAAAC 59.635 45.455 5.01 0.00 43.14 2.43
321 322 2.364970 CAGGCCAGACCATTGTGAAAAA 59.635 45.455 5.01 0.00 43.14 1.94
322 323 1.962807 CAGGCCAGACCATTGTGAAAA 59.037 47.619 5.01 0.00 43.14 2.29
323 324 1.619654 CAGGCCAGACCATTGTGAAA 58.380 50.000 5.01 0.00 43.14 2.69
324 325 0.251297 CCAGGCCAGACCATTGTGAA 60.251 55.000 5.01 0.00 43.14 3.18
325 326 1.379916 CCAGGCCAGACCATTGTGA 59.620 57.895 5.01 0.00 43.14 3.58
326 327 2.345760 GCCAGGCCAGACCATTGTG 61.346 63.158 5.01 0.00 43.14 3.33
327 328 2.036256 GCCAGGCCAGACCATTGT 59.964 61.111 5.01 0.00 43.14 2.71
344 345 3.963124 GACCACCCTGGCCCATTGG 62.963 68.421 0.00 4.05 42.67 3.16
345 346 2.362889 GACCACCCTGGCCCATTG 60.363 66.667 0.00 0.00 42.67 2.82
346 347 3.672503 GGACCACCCTGGCCCATT 61.673 66.667 0.00 0.00 40.17 3.16
349 350 4.678743 GTTGGACCACCCTGGCCC 62.679 72.222 0.00 0.00 42.67 5.80
350 351 4.678743 GGTTGGACCACCCTGGCC 62.679 72.222 0.00 0.00 42.67 5.36
351 352 3.569200 GAGGTTGGACCACCCTGGC 62.569 68.421 16.63 0.00 42.67 4.85
352 353 1.715019 TTGAGGTTGGACCACCCTGG 61.715 60.000 16.63 0.00 41.95 4.45
353 354 0.184933 TTTGAGGTTGGACCACCCTG 59.815 55.000 16.63 0.00 41.95 4.45
354 355 0.930726 TTTTGAGGTTGGACCACCCT 59.069 50.000 11.00 11.00 41.95 4.34
355 356 1.783071 TTTTTGAGGTTGGACCACCC 58.217 50.000 0.00 0.00 41.95 4.61
385 386 9.374711 TGGACCAACCTAGAATTTCTAAAATTT 57.625 29.630 7.51 0.00 39.86 1.82
386 387 8.950007 TGGACCAACCTAGAATTTCTAAAATT 57.050 30.769 7.51 0.00 39.86 1.82
387 388 8.971073 CATGGACCAACCTAGAATTTCTAAAAT 58.029 33.333 0.00 0.00 39.86 1.82
388 389 7.396055 CCATGGACCAACCTAGAATTTCTAAAA 59.604 37.037 5.56 0.00 39.86 1.52
389 390 6.889722 CCATGGACCAACCTAGAATTTCTAAA 59.110 38.462 5.56 0.00 39.86 1.85
390 391 6.216662 TCCATGGACCAACCTAGAATTTCTAA 59.783 38.462 11.44 0.00 39.86 2.10
391 392 5.729229 TCCATGGACCAACCTAGAATTTCTA 59.271 40.000 11.44 6.01 39.86 2.10
392 393 4.540099 TCCATGGACCAACCTAGAATTTCT 59.460 41.667 11.44 4.03 39.86 2.52
393 394 4.640647 GTCCATGGACCAACCTAGAATTTC 59.359 45.833 31.37 2.86 39.08 2.17
394 395 4.600062 GTCCATGGACCAACCTAGAATTT 58.400 43.478 31.37 0.00 39.08 1.82
395 396 4.236527 GTCCATGGACCAACCTAGAATT 57.763 45.455 31.37 0.00 39.08 2.17
396 397 3.933861 GTCCATGGACCAACCTAGAAT 57.066 47.619 31.37 0.00 39.08 2.40
407 408 0.181350 GGATCAGGTGGTCCATGGAC 59.819 60.000 33.14 33.14 43.87 4.02
408 409 0.253113 TGGATCAGGTGGTCCATGGA 60.253 55.000 11.44 11.44 39.51 3.41
409 410 0.107017 GTGGATCAGGTGGTCCATGG 60.107 60.000 15.07 4.97 45.57 3.66
410 411 0.107017 GGTGGATCAGGTGGTCCATG 60.107 60.000 15.07 0.00 45.57 3.66
411 412 0.253347 AGGTGGATCAGGTGGTCCAT 60.253 55.000 15.07 0.00 45.57 3.41
412 413 0.909610 GAGGTGGATCAGGTGGTCCA 60.910 60.000 7.95 7.95 42.03 4.02
413 414 1.627297 GGAGGTGGATCAGGTGGTCC 61.627 65.000 1.94 1.94 35.02 4.46
414 415 0.618968 AGGAGGTGGATCAGGTGGTC 60.619 60.000 0.00 0.00 0.00 4.02
415 416 0.716591 TAGGAGGTGGATCAGGTGGT 59.283 55.000 0.00 0.00 0.00 4.16
416 417 1.418334 CTAGGAGGTGGATCAGGTGG 58.582 60.000 0.00 0.00 0.00 4.61
417 418 0.755686 GCTAGGAGGTGGATCAGGTG 59.244 60.000 0.00 0.00 0.00 4.00
418 419 0.639392 AGCTAGGAGGTGGATCAGGT 59.361 55.000 0.00 0.00 0.00 4.00
419 420 2.243810 GTAGCTAGGAGGTGGATCAGG 58.756 57.143 0.00 0.00 0.00 3.86
420 421 2.625790 GTGTAGCTAGGAGGTGGATCAG 59.374 54.545 0.00 0.00 0.00 2.90
421 422 2.667470 GTGTAGCTAGGAGGTGGATCA 58.333 52.381 0.00 0.00 0.00 2.92
422 423 1.964933 GGTGTAGCTAGGAGGTGGATC 59.035 57.143 0.00 0.00 0.00 3.36
423 424 1.413227 GGGTGTAGCTAGGAGGTGGAT 60.413 57.143 0.00 0.00 0.00 3.41
424 425 0.032416 GGGTGTAGCTAGGAGGTGGA 60.032 60.000 0.00 0.00 0.00 4.02
425 426 1.049289 GGGGTGTAGCTAGGAGGTGG 61.049 65.000 0.00 0.00 0.00 4.61
426 427 0.032017 AGGGGTGTAGCTAGGAGGTG 60.032 60.000 0.00 0.00 0.00 4.00
427 428 0.032017 CAGGGGTGTAGCTAGGAGGT 60.032 60.000 0.00 0.00 0.00 3.85
428 429 0.032017 ACAGGGGTGTAGCTAGGAGG 60.032 60.000 0.00 0.00 0.00 4.30
429 430 1.867363 AACAGGGGTGTAGCTAGGAG 58.133 55.000 0.00 0.00 0.00 3.69
430 431 2.337359 AAACAGGGGTGTAGCTAGGA 57.663 50.000 0.00 0.00 0.00 2.94
431 432 2.304761 TGAAAACAGGGGTGTAGCTAGG 59.695 50.000 0.00 0.00 0.00 3.02
432 433 3.695830 TGAAAACAGGGGTGTAGCTAG 57.304 47.619 0.00 0.00 0.00 3.42
433 434 3.054655 GGATGAAAACAGGGGTGTAGCTA 60.055 47.826 0.00 0.00 0.00 3.32
434 435 2.290960 GGATGAAAACAGGGGTGTAGCT 60.291 50.000 0.00 0.00 0.00 3.32
435 436 2.092323 GGATGAAAACAGGGGTGTAGC 58.908 52.381 0.00 0.00 0.00 3.58
436 437 2.041081 TGGGATGAAAACAGGGGTGTAG 59.959 50.000 0.00 0.00 0.00 2.74
437 438 2.066592 TGGGATGAAAACAGGGGTGTA 58.933 47.619 0.00 0.00 0.00 2.90
438 439 0.856982 TGGGATGAAAACAGGGGTGT 59.143 50.000 0.00 0.00 0.00 4.16
439 440 2.236489 ATGGGATGAAAACAGGGGTG 57.764 50.000 0.00 0.00 0.00 4.61
440 441 4.016666 TCATTATGGGATGAAAACAGGGGT 60.017 41.667 0.00 0.00 33.31 4.95
441 442 4.545678 TCATTATGGGATGAAAACAGGGG 58.454 43.478 0.00 0.00 33.31 4.79
496 497 9.545105 TTGAAGAGCATTTTAAAACAATGTCAT 57.455 25.926 1.97 0.00 34.58 3.06
497 498 8.939201 TTGAAGAGCATTTTAAAACAATGTCA 57.061 26.923 1.97 1.01 34.58 3.58
558 559 8.938906 GGTACCAACGATGAATTTTACTCTAAA 58.061 33.333 7.15 0.00 0.00 1.85
685 686 1.584483 CGGCGTACGTTGCGTCTAT 60.584 57.895 17.90 0.00 41.54 1.98
825 829 3.391382 GGAGGTGGAGACGTGGGG 61.391 72.222 0.00 0.00 0.00 4.96
1052 1105 4.818546 AGAAGATTTACGGCAGGAATCATG 59.181 41.667 14.24 0.00 33.34 3.07
1092 1146 1.767759 ATGCCAGCCCTATCAAACAC 58.232 50.000 0.00 0.00 0.00 3.32
1173 1228 8.351648 ACCCTATCAGACAAATTGGGTTTGAAA 61.352 37.037 7.44 0.00 46.19 2.69
1177 1232 5.010708 ACCCTATCAGACAAATTGGGTTT 57.989 39.130 0.00 0.00 46.19 3.27
1223 1278 6.346096 TCGATGAAAATTAGACCCTTTCGAT 58.654 36.000 0.00 0.00 32.79 3.59
1262 1317 2.205342 ACCTAGGCCTATTCCAAAGCA 58.795 47.619 14.30 0.00 0.00 3.91
1289 1381 4.158394 CCAATGTTCTCCATACACCAAAGG 59.842 45.833 0.00 0.00 31.97 3.11
1463 1561 7.394359 GTCATACCAAACTATATGCCCATCAAT 59.606 37.037 0.00 0.00 0.00 2.57
1476 1574 8.682710 GCTTATCCAAATTGTCATACCAAACTA 58.317 33.333 0.00 0.00 0.00 2.24
1491 1589 3.525199 AGACCAGGTGAGCTTATCCAAAT 59.475 43.478 0.00 0.00 0.00 2.32
1714 1812 9.567776 TCATCAACAACCTTCTTAGTAATCAAA 57.432 29.630 0.00 0.00 0.00 2.69
1801 1899 4.754114 CCAGGCTTGCTAGTATGAGAAATC 59.246 45.833 0.00 0.00 0.00 2.17
1803 1907 3.774766 TCCAGGCTTGCTAGTATGAGAAA 59.225 43.478 0.00 0.00 0.00 2.52
1805 1909 3.032265 TCCAGGCTTGCTAGTATGAGA 57.968 47.619 0.00 0.00 0.00 3.27
1812 1916 3.614092 TCTGAATTTCCAGGCTTGCTAG 58.386 45.455 0.00 0.00 34.99 3.42
1898 2009 4.808558 TGCCTTCTTACAAACATGAATGC 58.191 39.130 0.00 0.00 33.08 3.56
1948 2059 2.309613 TGTCCTTGTTGCTCTGCATTT 58.690 42.857 0.00 0.00 38.76 2.32
1979 2090 0.107508 TCTTGGCCTACATGCTCTGC 60.108 55.000 3.32 0.00 0.00 4.26
1980 2091 2.158856 TCATCTTGGCCTACATGCTCTG 60.159 50.000 3.32 0.00 0.00 3.35
1981 2092 2.121948 TCATCTTGGCCTACATGCTCT 58.878 47.619 3.32 0.00 0.00 4.09
1982 2093 2.627515 TCATCTTGGCCTACATGCTC 57.372 50.000 3.32 0.00 0.00 4.26
1983 2094 2.174210 ACATCATCTTGGCCTACATGCT 59.826 45.455 3.32 0.00 0.00 3.79
1984 2095 2.579873 ACATCATCTTGGCCTACATGC 58.420 47.619 3.32 0.00 0.00 4.06
1985 2096 4.707105 TGTACATCATCTTGGCCTACATG 58.293 43.478 3.32 0.00 0.00 3.21
1986 2097 4.744867 GCTGTACATCATCTTGGCCTACAT 60.745 45.833 3.32 0.00 0.00 2.29
1987 2098 3.432186 GCTGTACATCATCTTGGCCTACA 60.432 47.826 3.32 0.00 0.00 2.74
1988 2099 3.134458 GCTGTACATCATCTTGGCCTAC 58.866 50.000 3.32 0.00 0.00 3.18
1989 2100 2.771372 TGCTGTACATCATCTTGGCCTA 59.229 45.455 3.32 0.00 0.00 3.93
1990 2101 1.561076 TGCTGTACATCATCTTGGCCT 59.439 47.619 3.32 0.00 0.00 5.19
1991 2102 2.042686 TGCTGTACATCATCTTGGCC 57.957 50.000 0.00 0.00 0.00 5.36
1992 2103 2.749076 TGTTGCTGTACATCATCTTGGC 59.251 45.455 0.00 0.00 0.00 4.52
1993 2104 4.637091 TCATGTTGCTGTACATCATCTTGG 59.363 41.667 16.98 6.02 36.72 3.61
1996 2107 5.737860 TCTTCATGTTGCTGTACATCATCT 58.262 37.500 0.00 0.00 36.72 2.90
2043 2154 2.574006 TTCATGTGGCTCTGCTTCTT 57.426 45.000 0.00 0.00 0.00 2.52
2063 2219 3.517100 TCTTGCTCTACTTGCTCTGGATT 59.483 43.478 0.00 0.00 0.00 3.01
2066 2222 2.495270 TCTCTTGCTCTACTTGCTCTGG 59.505 50.000 0.00 0.00 0.00 3.86
2086 2242 4.566360 GCATCTTCAACTACTGCTTCTCTC 59.434 45.833 0.00 0.00 0.00 3.20
2276 2451 5.775195 CCTTCCTTTTAACTGGTTCATCCTT 59.225 40.000 0.00 0.00 37.07 3.36
2472 2653 6.272318 TCAAACACTTGTCCAACATGAAATC 58.728 36.000 0.00 0.00 33.94 2.17
2565 2746 5.325239 TCACTCTCTTCCTGTCATTCACTA 58.675 41.667 0.00 0.00 0.00 2.74
2603 2784 5.768164 CCCACAAGTACCAAGTACAATCTTT 59.232 40.000 7.58 0.00 41.03 2.52
2614 2795 4.042311 TCATAAGAAGCCCACAAGTACCAA 59.958 41.667 0.00 0.00 0.00 3.67
2650 2831 9.959749 TCAACATACTTCTTTACCATGAAAAAC 57.040 29.630 0.00 0.00 0.00 2.43
3016 3210 3.774766 TGCAACCTTGAAGATAGCCTCTA 59.225 43.478 0.00 0.00 32.41 2.43
3063 3257 7.502561 GCCCTCTGTATCTTGTTTTAATATGGT 59.497 37.037 0.00 0.00 0.00 3.55
3306 3501 7.441890 TCAAAGTGTTAAACAAGTGTTCTCA 57.558 32.000 0.00 0.00 37.25 3.27
3307 3502 8.911247 AATCAAAGTGTTAAACAAGTGTTCTC 57.089 30.769 0.00 0.00 37.25 2.87
3311 3506 9.528018 CCAATAATCAAAGTGTTAAACAAGTGT 57.472 29.630 0.00 0.00 0.00 3.55
3312 3507 9.528018 ACCAATAATCAAAGTGTTAAACAAGTG 57.472 29.630 0.00 0.00 0.00 3.16
3313 3508 9.744468 GACCAATAATCAAAGTGTTAAACAAGT 57.256 29.630 0.00 0.00 0.00 3.16
3314 3509 9.965824 AGACCAATAATCAAAGTGTTAAACAAG 57.034 29.630 0.00 0.00 0.00 3.16
3330 3535 8.966868 CCCTACAAAACAACATAGACCAATAAT 58.033 33.333 0.00 0.00 0.00 1.28
3639 3844 4.876107 ACTTACTTGTTGAACACCTCACAG 59.124 41.667 0.00 0.00 32.21 3.66
3854 4062 5.903010 TGATCTTAGGGCACATTACTCCTTA 59.097 40.000 0.00 0.00 0.00 2.69
4054 4262 5.877491 TCTACTCTCTCACTCCTACAACAA 58.123 41.667 0.00 0.00 0.00 2.83
4065 4273 5.442391 AGGTTAGTGGATCTACTCTCTCAC 58.558 45.833 15.81 6.04 32.19 3.51
4191 4399 7.201652 GCTTCTTGTAGTCTGGTGGATTAATTC 60.202 40.741 0.00 0.00 0.00 2.17
4457 4666 0.468029 CTGGGCTTGTTGTGGAGGTT 60.468 55.000 0.00 0.00 0.00 3.50
4465 4674 1.880027 GACAGTTACCTGGGCTTGTTG 59.120 52.381 0.00 0.00 43.36 3.33
4518 4744 6.959671 TCAAACAAAAAGCTTGTTACTTGG 57.040 33.333 16.81 5.38 41.30 3.61
4519 4745 8.183830 TCATCAAACAAAAAGCTTGTTACTTG 57.816 30.769 0.36 8.61 41.30 3.16
4520 4746 7.010460 GCTCATCAAACAAAAAGCTTGTTACTT 59.990 33.333 0.36 0.00 41.30 2.24
4624 4854 7.976734 GCAAGTGACTAAGAGTACTCATGTTAT 59.023 37.037 24.44 4.99 0.00 1.89
4625 4855 7.176865 AGCAAGTGACTAAGAGTACTCATGTTA 59.823 37.037 24.44 13.07 0.00 2.41
4641 4871 5.474578 TGACTGAAATAGAGCAAGTGACT 57.525 39.130 0.00 0.00 0.00 3.41
4642 4872 5.447010 GCATGACTGAAATAGAGCAAGTGAC 60.447 44.000 0.00 0.00 0.00 3.67
4654 4904 7.040201 ACAATGTCACTAAAGCATGACTGAAAT 60.040 33.333 0.00 0.00 44.59 2.17
4725 4993 1.367659 GCTGAAGCACTCTAGGCAAG 58.632 55.000 0.00 0.00 41.59 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.