Multiple sequence alignment - TraesCS7A01G023300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G023300 chr7A 100.000 2507 0 0 1 2507 9320124 9317618 0.000000e+00 4630.0
1 TraesCS7A01G023300 chr7A 87.137 1034 82 19 721 1743 652922998 652922005 0.000000e+00 1125.0
2 TraesCS7A01G023300 chr7A 90.643 855 52 14 888 1734 9266258 9265424 0.000000e+00 1110.0
3 TraesCS7A01G023300 chr7A 84.658 365 30 13 87 438 9289176 9288825 8.590000e-90 340.0
4 TraesCS7A01G023300 chr7A 88.755 249 14 5 440 685 652923189 652922952 2.440000e-75 292.0
5 TraesCS7A01G023300 chr7A 93.651 189 7 3 707 895 9267932 9267749 6.830000e-71 278.0
6 TraesCS7A01G023300 chr7A 93.168 161 10 1 435 594 9288800 9288640 4.170000e-58 235.0
7 TraesCS7A01G023300 chr7A 83.908 261 15 9 748 998 9291059 9290816 9.020000e-55 224.0
8 TraesCS7A01G023300 chr7A 91.935 124 5 5 519 641 9291335 9291216 4.290000e-38 169.0
9 TraesCS7A01G023300 chr7A 83.432 169 18 8 232 391 9291648 9291481 5.590000e-32 148.0
10 TraesCS7A01G023300 chr7A 90.323 93 6 2 87 179 652942206 652942117 4.380000e-23 119.0
11 TraesCS7A01G023300 chr7A 87.952 83 1 3 608 688 9288655 9288580 3.430000e-14 89.8
12 TraesCS7A01G023300 chr7D 85.701 1070 91 30 721 1745 9033329 9032277 0.000000e+00 1072.0
13 TraesCS7A01G023300 chr7D 89.250 707 39 17 721 1408 9001067 9000379 0.000000e+00 850.0
14 TraesCS7A01G023300 chr7D 88.358 670 51 6 997 1654 9398462 9399116 0.000000e+00 780.0
15 TraesCS7A01G023300 chr7D 88.921 343 19 5 815 1157 10339843 10340166 3.000000e-109 405.0
16 TraesCS7A01G023300 chr7D 88.393 224 18 5 1194 1413 10851364 10851583 1.910000e-66 263.0
17 TraesCS7A01G023300 chr7D 89.573 211 16 6 2110 2316 596367370 596367162 1.910000e-66 263.0
18 TraesCS7A01G023300 chr7D 88.942 208 18 5 2113 2316 141535245 141535039 4.140000e-63 252.0
19 TraesCS7A01G023300 chr7D 88.462 208 19 5 2113 2316 141538852 141538646 1.930000e-61 246.0
20 TraesCS7A01G023300 chr7D 88.095 210 20 5 2110 2316 141544275 141544068 6.930000e-61 244.0
21 TraesCS7A01G023300 chr7D 92.814 167 9 2 519 684 10339682 10339846 3.220000e-59 239.0
22 TraesCS7A01G023300 chr7D 93.182 132 6 2 519 648 9398175 9398305 9.150000e-45 191.0
23 TraesCS7A01G023300 chr7D 88.811 143 6 6 547 685 9001154 9001018 1.540000e-37 167.0
24 TraesCS7A01G023300 chr7D 86.861 137 10 5 809 944 9398324 9398453 2.010000e-31 147.0
25 TraesCS7A01G023300 chr7D 86.275 102 4 4 584 685 9033374 9033283 4.410000e-18 102.0
26 TraesCS7A01G023300 chr7D 97.143 35 1 0 519 553 9033413 9033379 2.690000e-05 60.2
27 TraesCS7A01G023300 chr7D 96.875 32 1 0 694 725 480622604 480622573 1.000000e-03 54.7
28 TraesCS7A01G023300 chr5D 90.000 210 17 4 2110 2316 28022107 28021899 4.110000e-68 268.0
29 TraesCS7A01G023300 chr4D 89.100 211 18 5 2109 2316 108900087 108899879 8.900000e-65 257.0
30 TraesCS7A01G023300 chr6B 89.055 201 18 4 2110 2307 646052449 646052648 1.930000e-61 246.0
31 TraesCS7A01G023300 chr6D 88.152 211 18 6 2110 2316 56371900 56371693 6.930000e-61 244.0
32 TraesCS7A01G023300 chr3B 88.500 200 17 5 2110 2307 795216277 795216472 1.160000e-58 237.0
33 TraesCS7A01G023300 chr4A 93.103 58 4 0 2444 2501 89594964 89595021 4.440000e-13 86.1
34 TraesCS7A01G023300 chr4A 93.333 45 1 2 102 145 667240980 667241023 5.790000e-07 65.8
35 TraesCS7A01G023300 chr4A 97.368 38 0 1 102 138 667262965 667263002 2.080000e-06 63.9
36 TraesCS7A01G023300 chr4A 91.111 45 2 2 102 145 667286570 667286613 2.690000e-05 60.2
37 TraesCS7A01G023300 chr5B 94.595 37 2 0 687 723 643036006 643035970 9.690000e-05 58.4
38 TraesCS7A01G023300 chr5B 94.444 36 2 0 688 723 261451133 261451168 3.480000e-04 56.5
39 TraesCS7A01G023300 chr7B 100.000 30 0 0 694 723 330354221 330354192 3.480000e-04 56.5
40 TraesCS7A01G023300 chr7B 100.000 30 0 0 694 723 631293948 631293977 3.480000e-04 56.5
41 TraesCS7A01G023300 chrUn 92.308 39 2 1 688 725 53742651 53742689 1.000000e-03 54.7
42 TraesCS7A01G023300 chr5A 94.286 35 2 0 691 725 658716857 658716891 1.000000e-03 54.7
43 TraesCS7A01G023300 chr3A 96.875 32 1 0 694 725 608387487 608387456 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G023300 chr7A 9317618 9320124 2506 True 4630.000000 4630 100.000000 1 2507 1 chr7A.!!$R1 2506
1 TraesCS7A01G023300 chr7A 652922005 652923189 1184 True 708.500000 1125 87.946000 440 1743 2 chr7A.!!$R5 1303
2 TraesCS7A01G023300 chr7A 9265424 9267932 2508 True 694.000000 1110 92.147000 707 1734 2 chr7A.!!$R3 1027
3 TraesCS7A01G023300 chr7A 9288580 9291648 3068 True 200.966667 340 87.508833 87 998 6 chr7A.!!$R4 911
4 TraesCS7A01G023300 chr7D 9000379 9001154 775 True 508.500000 850 89.030500 547 1408 2 chr7D.!!$R4 861
5 TraesCS7A01G023300 chr7D 9032277 9033413 1136 True 411.400000 1072 89.706333 519 1745 3 chr7D.!!$R5 1226
6 TraesCS7A01G023300 chr7D 9398175 9399116 941 False 372.666667 780 89.467000 519 1654 3 chr7D.!!$F2 1135
7 TraesCS7A01G023300 chr7D 141535039 141538852 3813 True 249.000000 252 88.702000 2113 2316 2 chr7D.!!$R6 203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 901 0.038744 CTTTGCCTCAGGGTGGTCAT 59.961 55.0 0.0 0.0 34.45 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2100 5530 0.030908 GGAGTAGAGATTCCGTGCCG 59.969 60.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 9.613428 TGGTCTATCAAAAGTATGGAAATACTG 57.387 33.333 0.00 0.00 37.43 2.74
50 51 9.614792 GGTCTATCAAAAGTATGGAAATACTGT 57.385 33.333 0.00 0.00 37.43 3.55
55 56 8.251750 TCAAAAGTATGGAAATACTGTTCTCG 57.748 34.615 0.00 0.00 37.43 4.04
56 57 8.092068 TCAAAAGTATGGAAATACTGTTCTCGA 58.908 33.333 0.00 0.00 37.43 4.04
57 58 8.717821 CAAAAGTATGGAAATACTGTTCTCGAA 58.282 33.333 0.00 0.00 37.43 3.71
58 59 8.842358 AAAGTATGGAAATACTGTTCTCGAAA 57.158 30.769 0.00 0.00 37.43 3.46
59 60 8.842358 AAGTATGGAAATACTGTTCTCGAAAA 57.158 30.769 0.00 0.00 37.43 2.29
60 61 8.842358 AGTATGGAAATACTGTTCTCGAAAAA 57.158 30.769 0.00 0.00 36.13 1.94
113 114 3.134574 TGGAAATACCACGTGAAAGCT 57.865 42.857 19.30 0.00 44.64 3.74
114 115 4.274602 TGGAAATACCACGTGAAAGCTA 57.725 40.909 19.30 0.00 44.64 3.32
115 116 4.250464 TGGAAATACCACGTGAAAGCTAG 58.750 43.478 19.30 0.00 44.64 3.42
116 117 3.063588 GGAAATACCACGTGAAAGCTAGC 59.936 47.826 19.30 6.62 38.79 3.42
117 118 2.311124 ATACCACGTGAAAGCTAGCC 57.689 50.000 19.30 0.00 0.00 3.93
118 119 1.263356 TACCACGTGAAAGCTAGCCT 58.737 50.000 19.30 0.00 0.00 4.58
119 120 1.263356 ACCACGTGAAAGCTAGCCTA 58.737 50.000 19.30 0.00 0.00 3.93
120 121 1.204941 ACCACGTGAAAGCTAGCCTAG 59.795 52.381 19.30 0.00 0.00 3.02
129 130 4.434685 CTAGCCTAGCTGCACTGC 57.565 61.111 1.02 0.36 40.10 4.40
130 131 1.519246 CTAGCCTAGCTGCACTGCA 59.481 57.895 3.11 3.11 40.10 4.41
131 132 0.106335 CTAGCCTAGCTGCACTGCAT 59.894 55.000 3.64 0.00 40.10 3.96
132 133 0.179065 TAGCCTAGCTGCACTGCATG 60.179 55.000 3.64 0.32 40.10 4.06
133 134 2.478890 GCCTAGCTGCACTGCATGG 61.479 63.158 3.64 6.21 38.13 3.66
134 135 2.478890 CCTAGCTGCACTGCATGGC 61.479 63.158 3.64 5.64 38.13 4.40
135 136 2.820619 CTAGCTGCACTGCATGGCG 61.821 63.158 3.64 0.00 38.13 5.69
146 147 2.595463 CATGGCGCCGGGATCATT 60.595 61.111 23.90 0.00 0.00 2.57
147 148 2.281761 ATGGCGCCGGGATCATTC 60.282 61.111 23.90 0.00 0.00 2.67
148 149 2.822637 ATGGCGCCGGGATCATTCT 61.823 57.895 23.90 0.00 0.00 2.40
149 150 2.974698 GGCGCCGGGATCATTCTG 60.975 66.667 12.58 0.00 0.00 3.02
150 151 3.654020 GCGCCGGGATCATTCTGC 61.654 66.667 2.18 0.00 0.00 4.26
151 152 2.109799 CGCCGGGATCATTCTGCT 59.890 61.111 2.18 0.00 0.00 4.24
152 153 1.524621 CGCCGGGATCATTCTGCTT 60.525 57.895 2.18 0.00 0.00 3.91
153 154 1.502163 CGCCGGGATCATTCTGCTTC 61.502 60.000 2.18 0.00 0.00 3.86
154 155 1.169034 GCCGGGATCATTCTGCTTCC 61.169 60.000 2.18 0.00 0.00 3.46
155 156 0.536006 CCGGGATCATTCTGCTTCCC 60.536 60.000 0.00 0.00 43.75 3.97
156 157 0.471617 CGGGATCATTCTGCTTCCCT 59.528 55.000 5.38 0.00 44.80 4.20
157 158 1.542108 CGGGATCATTCTGCTTCCCTC 60.542 57.143 5.38 0.00 44.80 4.30
158 159 1.542108 GGGATCATTCTGCTTCCCTCG 60.542 57.143 0.00 0.00 43.81 4.63
159 160 1.224965 GATCATTCTGCTTCCCTCGC 58.775 55.000 0.00 0.00 0.00 5.03
160 161 0.531532 ATCATTCTGCTTCCCTCGCG 60.532 55.000 0.00 0.00 0.00 5.87
161 162 1.448540 CATTCTGCTTCCCTCGCGT 60.449 57.895 5.77 0.00 0.00 6.01
162 163 1.448540 ATTCTGCTTCCCTCGCGTG 60.449 57.895 5.77 2.75 0.00 5.34
163 164 4.742201 TCTGCTTCCCTCGCGTGC 62.742 66.667 5.77 3.13 0.00 5.34
167 168 4.069232 CTTCCCTCGCGTGCAGGA 62.069 66.667 13.56 7.88 31.91 3.86
168 169 3.997064 CTTCCCTCGCGTGCAGGAG 62.997 68.421 13.56 7.27 31.91 3.69
170 171 4.504916 CCCTCGCGTGCAGGAGAG 62.505 72.222 26.93 26.93 31.91 3.20
172 173 4.127040 CTCGCGTGCAGGAGAGCT 62.127 66.667 23.76 0.00 34.99 4.09
173 174 2.750237 TCGCGTGCAGGAGAGCTA 60.750 61.111 11.29 0.00 34.99 3.32
174 175 2.278466 CGCGTGCAGGAGAGCTAG 60.278 66.667 11.29 0.00 34.99 3.42
175 176 2.584694 GCGTGCAGGAGAGCTAGC 60.585 66.667 11.29 6.62 34.99 3.42
176 177 2.105930 CGTGCAGGAGAGCTAGCC 59.894 66.667 12.13 2.81 34.99 3.93
177 178 2.422231 CGTGCAGGAGAGCTAGCCT 61.422 63.158 12.13 8.35 34.99 4.58
178 179 1.103987 CGTGCAGGAGAGCTAGCCTA 61.104 60.000 12.13 0.00 32.03 3.93
179 180 0.673437 GTGCAGGAGAGCTAGCCTAG 59.327 60.000 12.13 0.00 32.03 3.02
188 189 4.434685 CTAGCCTAGCTGCACTGC 57.565 61.111 1.02 0.36 40.10 4.40
189 190 1.591059 CTAGCCTAGCTGCACTGCG 60.591 63.158 1.02 0.00 40.10 5.18
190 191 2.290122 CTAGCCTAGCTGCACTGCGT 62.290 60.000 1.02 0.00 40.10 5.24
191 192 2.563050 TAGCCTAGCTGCACTGCGTG 62.563 60.000 1.02 4.61 40.10 5.34
192 193 2.816958 CCTAGCTGCACTGCGTGG 60.817 66.667 1.02 0.00 38.13 4.94
193 194 3.494336 CTAGCTGCACTGCGTGGC 61.494 66.667 1.02 1.24 38.13 5.01
194 195 3.947132 CTAGCTGCACTGCGTGGCT 62.947 63.158 16.40 16.40 38.13 4.75
195 196 3.939837 TAGCTGCACTGCGTGGCTC 62.940 63.158 15.86 0.00 38.13 4.70
197 198 4.694233 CTGCACTGCGTGGCTCCT 62.694 66.667 10.02 0.00 33.64 3.69
198 199 4.994471 TGCACTGCGTGGCTCCTG 62.994 66.667 10.02 0.00 33.64 3.86
200 201 4.320456 CACTGCGTGGCTCCTGGT 62.320 66.667 0.00 0.00 0.00 4.00
201 202 4.008933 ACTGCGTGGCTCCTGGTC 62.009 66.667 0.00 0.00 0.00 4.02
202 203 4.767255 CTGCGTGGCTCCTGGTCC 62.767 72.222 0.00 0.00 0.00 4.46
205 206 4.003788 CGTGGCTCCTGGTCCGTT 62.004 66.667 0.00 0.00 0.00 4.44
206 207 2.047179 GTGGCTCCTGGTCCGTTC 60.047 66.667 0.00 0.00 0.00 3.95
207 208 3.691342 TGGCTCCTGGTCCGTTCG 61.691 66.667 0.00 0.00 0.00 3.95
208 209 4.452733 GGCTCCTGGTCCGTTCGG 62.453 72.222 4.74 4.74 0.00 4.30
209 210 3.692406 GCTCCTGGTCCGTTCGGT 61.692 66.667 11.04 0.00 0.00 4.69
210 211 3.057337 CTCCTGGTCCGTTCGGTT 58.943 61.111 11.04 0.00 0.00 4.44
211 212 1.080025 CTCCTGGTCCGTTCGGTTC 60.080 63.158 11.04 6.01 0.00 3.62
212 213 2.431942 CCTGGTCCGTTCGGTTCG 60.432 66.667 11.04 0.00 0.00 3.95
213 214 3.110178 CTGGTCCGTTCGGTTCGC 61.110 66.667 11.04 1.27 0.00 4.70
214 215 3.569049 CTGGTCCGTTCGGTTCGCT 62.569 63.158 11.04 0.00 0.00 4.93
215 216 2.808321 GGTCCGTTCGGTTCGCTC 60.808 66.667 11.04 0.00 0.00 5.03
216 217 2.808321 GTCCGTTCGGTTCGCTCC 60.808 66.667 11.04 0.00 0.00 4.70
217 218 3.296836 TCCGTTCGGTTCGCTCCA 61.297 61.111 11.04 0.00 0.00 3.86
218 219 2.356553 CCGTTCGGTTCGCTCCAA 60.357 61.111 2.82 0.00 0.00 3.53
219 220 2.664436 CCGTTCGGTTCGCTCCAAC 61.664 63.158 2.82 0.00 0.00 3.77
220 221 2.851104 GTTCGGTTCGCTCCAACG 59.149 61.111 0.00 0.00 0.00 4.10
221 222 3.039588 TTCGGTTCGCTCCAACGC 61.040 61.111 0.00 0.00 0.00 4.84
222 223 3.793775 TTCGGTTCGCTCCAACGCA 62.794 57.895 0.00 0.00 0.00 5.24
223 224 4.072088 CGGTTCGCTCCAACGCAC 62.072 66.667 0.00 0.00 0.00 5.34
224 225 2.970324 GGTTCGCTCCAACGCACA 60.970 61.111 0.00 0.00 30.50 4.57
225 226 2.325082 GGTTCGCTCCAACGCACAT 61.325 57.895 0.00 0.00 30.50 3.21
226 227 1.132640 GTTCGCTCCAACGCACATC 59.867 57.895 0.00 0.00 0.00 3.06
227 228 2.032634 TTCGCTCCAACGCACATCC 61.033 57.895 0.00 0.00 0.00 3.51
228 229 3.853330 CGCTCCAACGCACATCCG 61.853 66.667 0.00 0.00 0.00 4.18
229 230 2.434185 GCTCCAACGCACATCCGA 60.434 61.111 0.00 0.00 0.00 4.55
230 231 2.740714 GCTCCAACGCACATCCGAC 61.741 63.158 0.00 0.00 0.00 4.79
231 232 2.047655 TCCAACGCACATCCGACC 60.048 61.111 0.00 0.00 0.00 4.79
232 233 3.124921 CCAACGCACATCCGACCC 61.125 66.667 0.00 0.00 0.00 4.46
233 234 2.047274 CAACGCACATCCGACCCT 60.047 61.111 0.00 0.00 0.00 4.34
234 235 1.216977 CAACGCACATCCGACCCTA 59.783 57.895 0.00 0.00 0.00 3.53
235 236 1.082117 CAACGCACATCCGACCCTAC 61.082 60.000 0.00 0.00 0.00 3.18
236 237 2.278596 CGCACATCCGACCCTACG 60.279 66.667 0.00 0.00 0.00 3.51
237 238 2.767445 CGCACATCCGACCCTACGA 61.767 63.158 0.00 0.00 35.09 3.43
238 239 1.065928 GCACATCCGACCCTACGAG 59.934 63.158 0.00 0.00 35.09 4.18
239 240 1.381928 GCACATCCGACCCTACGAGA 61.382 60.000 0.00 0.00 35.09 4.04
240 241 0.663688 CACATCCGACCCTACGAGAG 59.336 60.000 0.00 0.00 35.09 3.20
244 245 1.747709 TCCGACCCTACGAGAGAAAG 58.252 55.000 0.00 0.00 35.09 2.62
254 255 2.352388 ACGAGAGAAAGACGAGAGAGG 58.648 52.381 0.00 0.00 0.00 3.69
257 258 2.350498 GAGAGAAAGACGAGAGAGGACG 59.650 54.545 0.00 0.00 0.00 4.79
259 260 1.003349 AGAAAGACGAGAGAGGACGGA 59.997 52.381 0.00 0.00 0.00 4.69
260 261 1.130938 GAAAGACGAGAGAGGACGGAC 59.869 57.143 0.00 0.00 0.00 4.79
266 267 1.646624 GAGAGAGGACGGACGTCACC 61.647 65.000 24.00 16.48 46.20 4.02
274 275 2.418356 GGACGTCACCGGACAACA 59.582 61.111 18.91 0.00 44.54 3.33
275 276 1.952635 GGACGTCACCGGACAACAC 60.953 63.158 18.91 0.00 44.54 3.32
294 296 0.734889 CCAAGAAGCCCGCAACTATG 59.265 55.000 0.00 0.00 0.00 2.23
314 316 1.754226 GAGAAAAACACAACCAGGCCA 59.246 47.619 5.01 0.00 0.00 5.36
325 327 2.348998 CAGGCCACTGGTCAGGTC 59.651 66.667 5.01 0.00 41.13 3.85
326 328 2.930562 AGGCCACTGGTCAGGTCC 60.931 66.667 5.01 1.02 0.00 4.46
327 329 4.394712 GGCCACTGGTCAGGTCCG 62.395 72.222 0.00 0.00 0.00 4.79
329 331 4.394712 CCACTGGTCAGGTCCGCC 62.395 72.222 2.87 0.00 0.00 6.13
331 333 4.988716 ACTGGTCAGGTCCGCCGA 62.989 66.667 2.87 0.00 40.50 5.54
383 390 1.315690 CGGAGCTGGAATGCATTGAT 58.684 50.000 18.59 0.28 34.99 2.57
384 391 1.001706 CGGAGCTGGAATGCATTGATG 60.002 52.381 18.59 7.19 34.99 3.07
385 392 1.340248 GGAGCTGGAATGCATTGATGG 59.660 52.381 18.59 5.37 34.99 3.51
386 393 0.750850 AGCTGGAATGCATTGATGGC 59.249 50.000 18.59 14.66 34.99 4.40
387 394 0.462375 GCTGGAATGCATTGATGGCA 59.538 50.000 18.59 0.00 46.66 4.92
409 416 1.475280 CATGGCAATCAACTGGTCAGG 59.525 52.381 0.00 0.00 0.00 3.86
410 417 0.478072 TGGCAATCAACTGGTCAGGT 59.522 50.000 2.87 0.00 0.00 4.00
411 418 1.168714 GGCAATCAACTGGTCAGGTC 58.831 55.000 2.87 0.00 0.00 3.85
412 419 1.168714 GCAATCAACTGGTCAGGTCC 58.831 55.000 2.87 0.00 0.00 4.46
413 420 1.271597 GCAATCAACTGGTCAGGTCCT 60.272 52.381 2.87 0.00 0.00 3.85
414 421 2.815589 GCAATCAACTGGTCAGGTCCTT 60.816 50.000 2.87 0.00 0.00 3.36
415 422 3.077359 CAATCAACTGGTCAGGTCCTTC 58.923 50.000 2.87 0.00 0.00 3.46
416 423 2.103153 TCAACTGGTCAGGTCCTTCT 57.897 50.000 2.87 0.00 0.00 2.85
417 424 2.408565 TCAACTGGTCAGGTCCTTCTT 58.591 47.619 2.87 0.00 0.00 2.52
418 425 2.104792 TCAACTGGTCAGGTCCTTCTTG 59.895 50.000 2.87 0.00 0.00 3.02
419 426 1.807814 ACTGGTCAGGTCCTTCTTGT 58.192 50.000 2.87 0.00 0.00 3.16
420 427 1.417890 ACTGGTCAGGTCCTTCTTGTG 59.582 52.381 2.87 0.00 0.00 3.33
421 428 0.108585 TGGTCAGGTCCTTCTTGTGC 59.891 55.000 0.00 0.00 0.00 4.57
422 429 0.606673 GGTCAGGTCCTTCTTGTGCC 60.607 60.000 0.00 0.00 0.00 5.01
423 430 0.398318 GTCAGGTCCTTCTTGTGCCT 59.602 55.000 0.00 0.00 0.00 4.75
424 431 0.397941 TCAGGTCCTTCTTGTGCCTG 59.602 55.000 0.00 0.00 45.82 4.85
425 432 1.073897 AGGTCCTTCTTGTGCCTGC 59.926 57.895 0.00 0.00 0.00 4.85
426 433 2.328099 GGTCCTTCTTGTGCCTGCG 61.328 63.158 0.00 0.00 0.00 5.18
427 434 1.301716 GTCCTTCTTGTGCCTGCGA 60.302 57.895 0.00 0.00 0.00 5.10
428 435 1.004560 TCCTTCTTGTGCCTGCGAG 60.005 57.895 0.00 0.00 0.00 5.03
429 436 1.004560 CCTTCTTGTGCCTGCGAGA 60.005 57.895 0.00 0.00 0.00 4.04
430 437 0.603707 CCTTCTTGTGCCTGCGAGAA 60.604 55.000 0.00 0.00 36.75 2.87
431 438 0.795085 CTTCTTGTGCCTGCGAGAAG 59.205 55.000 12.58 12.58 45.24 2.85
432 439 0.392706 TTCTTGTGCCTGCGAGAAGA 59.607 50.000 0.00 0.00 34.82 2.87
433 440 0.392706 TCTTGTGCCTGCGAGAAGAA 59.607 50.000 0.00 0.00 0.00 2.52
434 441 0.795085 CTTGTGCCTGCGAGAAGAAG 59.205 55.000 0.00 0.00 0.00 2.85
435 442 0.392706 TTGTGCCTGCGAGAAGAAGA 59.607 50.000 0.00 0.00 0.00 2.87
438 445 0.244994 TGCCTGCGAGAAGAAGAGAC 59.755 55.000 0.00 0.00 0.00 3.36
450 457 6.690957 CGAGAAGAAGAGACTATACAAGCAAG 59.309 42.308 0.00 0.00 0.00 4.01
494 501 6.986904 AGGTACTCTAGCAAAAGCATAAAC 57.013 37.500 0.00 0.00 0.00 2.01
500 507 7.533426 ACTCTAGCAAAAGCATAAACATCAAG 58.467 34.615 0.00 0.00 0.00 3.02
553 604 3.194116 TCGGCCCAAACAGTAAGTACTAG 59.806 47.826 0.00 0.00 34.13 2.57
598 649 9.628500 ATCAAAGTAGGAGTAACACTTTTTCTT 57.372 29.630 0.00 0.00 39.78 2.52
601 656 9.457436 AAAGTAGGAGTAACACTTTTTCTTTCA 57.543 29.630 0.00 0.00 38.94 2.69
649 847 2.306847 TCGACCATCCATCGAGAATCA 58.693 47.619 0.00 0.00 43.38 2.57
650 848 2.693074 TCGACCATCCATCGAGAATCAA 59.307 45.455 0.00 0.00 43.38 2.57
651 849 3.055591 CGACCATCCATCGAGAATCAAG 58.944 50.000 0.00 0.00 42.25 3.02
652 850 3.243535 CGACCATCCATCGAGAATCAAGA 60.244 47.826 0.00 0.00 42.25 3.02
653 851 4.697514 GACCATCCATCGAGAATCAAGAA 58.302 43.478 0.00 0.00 33.17 2.52
654 852 5.301835 ACCATCCATCGAGAATCAAGAAT 57.698 39.130 0.00 0.00 33.17 2.40
655 853 6.425210 ACCATCCATCGAGAATCAAGAATA 57.575 37.500 0.00 0.00 33.17 1.75
656 854 6.462500 ACCATCCATCGAGAATCAAGAATAG 58.538 40.000 0.00 0.00 33.17 1.73
657 855 5.873712 CCATCCATCGAGAATCAAGAATAGG 59.126 44.000 0.00 0.00 33.17 2.57
658 856 6.462500 CATCCATCGAGAATCAAGAATAGGT 58.538 40.000 0.00 0.00 33.17 3.08
659 857 7.310052 CCATCCATCGAGAATCAAGAATAGGTA 60.310 40.741 0.00 0.00 33.17 3.08
660 858 6.982852 TCCATCGAGAATCAAGAATAGGTAC 58.017 40.000 0.00 0.00 33.17 3.34
661 859 5.859114 CCATCGAGAATCAAGAATAGGTACG 59.141 44.000 0.00 0.00 33.17 3.67
662 860 6.294010 CCATCGAGAATCAAGAATAGGTACGA 60.294 42.308 0.00 0.00 33.17 3.43
663 861 6.879276 TCGAGAATCAAGAATAGGTACGAT 57.121 37.500 0.00 0.00 33.17 3.73
664 862 6.669278 TCGAGAATCAAGAATAGGTACGATG 58.331 40.000 0.00 0.00 33.17 3.84
665 863 5.343593 CGAGAATCAAGAATAGGTACGATGC 59.656 44.000 0.00 0.00 33.17 3.91
666 864 6.161855 AGAATCAAGAATAGGTACGATGCA 57.838 37.500 0.00 0.00 0.00 3.96
667 865 6.763355 AGAATCAAGAATAGGTACGATGCAT 58.237 36.000 0.00 0.00 0.00 3.96
668 866 6.648310 AGAATCAAGAATAGGTACGATGCATG 59.352 38.462 2.46 0.00 0.00 4.06
669 867 4.058124 TCAAGAATAGGTACGATGCATGC 58.942 43.478 11.82 11.82 0.00 4.06
670 868 3.751479 AGAATAGGTACGATGCATGCA 57.249 42.857 25.04 25.04 0.00 3.96
671 869 3.393800 AGAATAGGTACGATGCATGCAC 58.606 45.455 25.37 15.77 0.00 4.57
672 870 2.908688 ATAGGTACGATGCATGCACA 57.091 45.000 25.37 5.73 0.00 4.57
673 871 2.223537 TAGGTACGATGCATGCACAG 57.776 50.000 25.37 21.59 0.00 3.66
674 872 0.462581 AGGTACGATGCATGCACAGG 60.463 55.000 25.37 17.17 0.00 4.00
675 873 0.744414 GGTACGATGCATGCACAGGT 60.744 55.000 25.37 21.90 0.00 4.00
676 874 0.652592 GTACGATGCATGCACAGGTC 59.347 55.000 25.37 15.77 0.00 3.85
677 875 0.536724 TACGATGCATGCACAGGTCT 59.463 50.000 25.37 5.55 0.00 3.85
678 876 0.742281 ACGATGCATGCACAGGTCTC 60.742 55.000 25.37 14.58 0.00 3.36
679 877 0.741927 CGATGCATGCACAGGTCTCA 60.742 55.000 25.37 0.00 0.00 3.27
680 878 1.456296 GATGCATGCACAGGTCTCAA 58.544 50.000 25.37 0.00 0.00 3.02
681 879 1.131883 GATGCATGCACAGGTCTCAAC 59.868 52.381 25.37 0.98 0.00 3.18
682 880 0.179023 TGCATGCACAGGTCTCAACA 60.179 50.000 18.46 0.00 0.00 3.33
683 881 0.239347 GCATGCACAGGTCTCAACAC 59.761 55.000 14.21 0.00 0.00 3.32
684 882 0.877071 CATGCACAGGTCTCAACACC 59.123 55.000 0.00 0.00 36.58 4.16
686 884 0.546122 TGCACAGGTCTCAACACCTT 59.454 50.000 0.00 0.00 45.24 3.50
687 885 1.064758 TGCACAGGTCTCAACACCTTT 60.065 47.619 0.00 0.00 45.24 3.11
688 886 1.334869 GCACAGGTCTCAACACCTTTG 59.665 52.381 2.02 2.02 45.24 2.77
689 887 1.334869 CACAGGTCTCAACACCTTTGC 59.665 52.381 0.00 0.00 45.24 3.68
690 888 0.954452 CAGGTCTCAACACCTTTGCC 59.046 55.000 0.00 0.00 45.24 4.52
691 889 0.846693 AGGTCTCAACACCTTTGCCT 59.153 50.000 0.00 0.00 45.24 4.75
692 890 1.202818 AGGTCTCAACACCTTTGCCTC 60.203 52.381 0.00 0.00 45.24 4.70
693 891 1.476833 GGTCTCAACACCTTTGCCTCA 60.477 52.381 0.00 0.00 33.08 3.86
694 892 1.876156 GTCTCAACACCTTTGCCTCAG 59.124 52.381 0.00 0.00 0.00 3.35
695 893 1.202806 TCTCAACACCTTTGCCTCAGG 60.203 52.381 0.00 0.00 37.45 3.86
696 894 0.178992 TCAACACCTTTGCCTCAGGG 60.179 55.000 0.00 0.00 35.46 4.45
697 895 0.468029 CAACACCTTTGCCTCAGGGT 60.468 55.000 0.00 0.00 35.46 4.34
698 896 4.085876 CACCTTTGCCTCAGGGTG 57.914 61.111 0.00 0.00 42.29 4.61
699 897 1.604593 CACCTTTGCCTCAGGGTGG 60.605 63.158 0.00 0.00 43.69 4.61
700 898 2.084930 ACCTTTGCCTCAGGGTGGT 61.085 57.895 0.00 0.00 35.46 4.16
701 899 1.303643 CCTTTGCCTCAGGGTGGTC 60.304 63.158 0.00 0.00 34.45 4.02
702 900 1.455849 CTTTGCCTCAGGGTGGTCA 59.544 57.895 0.00 0.00 34.45 4.02
703 901 0.038744 CTTTGCCTCAGGGTGGTCAT 59.961 55.000 0.00 0.00 34.45 3.06
704 902 1.281867 CTTTGCCTCAGGGTGGTCATA 59.718 52.381 0.00 0.00 34.45 2.15
705 903 0.911769 TTGCCTCAGGGTGGTCATAG 59.088 55.000 0.00 0.00 34.45 2.23
709 907 0.833287 CTCAGGGTGGTCATAGTGGG 59.167 60.000 0.00 0.00 0.00 4.61
712 910 0.326618 AGGGTGGTCATAGTGGGGAG 60.327 60.000 0.00 0.00 0.00 4.30
735 933 5.892119 AGTAACTTAGACCATCCATCGAGAA 59.108 40.000 0.00 0.00 0.00 2.87
736 934 5.878406 AACTTAGACCATCCATCGAGAAT 57.122 39.130 0.00 0.00 0.00 2.40
773 971 0.108585 ACATGTCTCACCACCACCAC 59.891 55.000 0.00 0.00 0.00 4.16
791 989 0.250124 ACCATGCAAAACGTCTCGGA 60.250 50.000 0.00 0.00 0.00 4.55
835 1035 3.244078 CCCACAAATATCTCGATCGGGAA 60.244 47.826 23.64 11.85 32.60 3.97
1293 3317 4.735132 GACTGCGCGGTGTGCCTA 62.735 66.667 29.82 0.00 42.08 3.93
1515 4463 1.472480 CGGATGAATTGAACCACACCC 59.528 52.381 0.00 0.00 0.00 4.61
1578 4526 2.170012 TACTAACCGGAGAATGGCCT 57.830 50.000 9.46 0.00 0.00 5.19
1602 4576 0.537143 TTGTGGTGTGGTCATGGCTC 60.537 55.000 0.00 0.00 0.00 4.70
1625 5053 1.404986 GCCATAGTGCGTGTACAGGAA 60.405 52.381 19.35 5.87 0.00 3.36
1627 5055 2.866156 CCATAGTGCGTGTACAGGAATG 59.134 50.000 19.35 14.13 0.00 2.67
1639 5067 5.295787 GTGTACAGGAATGTTTGTGAAGTCA 59.704 40.000 0.00 0.00 0.00 3.41
1649 5077 4.697828 TGTTTGTGAAGTCAAGTGTGCTTA 59.302 37.500 0.00 0.00 32.87 3.09
1655 5083 6.149308 TGTGAAGTCAAGTGTGCTTATATTGG 59.851 38.462 0.00 0.00 32.87 3.16
1661 5089 3.282021 AGTGTGCTTATATTGGTGGCTG 58.718 45.455 0.00 0.00 0.00 4.85
1674 5102 0.447801 GTGGCTGCGTTTCATAGTGG 59.552 55.000 0.00 0.00 0.00 4.00
1686 5115 6.872020 GCGTTTCATAGTGGGCTTAGATATTA 59.128 38.462 0.00 0.00 0.00 0.98
1710 5140 7.755582 ATTTTCACAAGAAGAAAAACCTTCG 57.244 32.000 5.35 0.00 45.02 3.79
1711 5141 4.287238 TCACAAGAAGAAAAACCTTCGC 57.713 40.909 0.00 0.00 45.32 4.70
1725 5155 4.130286 ACCTTCGCAAATTTTGACCAAA 57.870 36.364 13.26 0.00 0.00 3.28
1816 5246 9.744468 AATAAATAAAATATGACAAACGGCTCC 57.256 29.630 0.00 0.00 0.00 4.70
1817 5247 3.757745 AAAATATGACAAACGGCTCCG 57.242 42.857 6.79 6.79 46.03 4.63
1818 5248 1.014352 AATATGACAAACGGCTCCGC 58.986 50.000 8.41 0.00 44.19 5.54
1819 5249 0.178068 ATATGACAAACGGCTCCGCT 59.822 50.000 8.41 0.00 44.19 5.52
1820 5250 0.459585 TATGACAAACGGCTCCGCTC 60.460 55.000 8.41 0.00 44.19 5.03
1821 5251 3.479269 GACAAACGGCTCCGCTCG 61.479 66.667 8.41 0.00 44.19 5.03
1822 5252 3.909258 GACAAACGGCTCCGCTCGA 62.909 63.158 8.41 0.00 44.19 4.04
1823 5253 2.509336 CAAACGGCTCCGCTCGAT 60.509 61.111 8.41 0.00 44.19 3.59
1824 5254 2.509336 AAACGGCTCCGCTCGATG 60.509 61.111 8.41 0.00 44.19 3.84
1825 5255 3.296709 AAACGGCTCCGCTCGATGT 62.297 57.895 8.41 0.00 44.19 3.06
1826 5256 3.701604 AACGGCTCCGCTCGATGTC 62.702 63.158 8.41 0.00 44.19 3.06
1827 5257 3.893763 CGGCTCCGCTCGATGTCT 61.894 66.667 0.00 0.00 0.00 3.41
1828 5258 2.026879 GGCTCCGCTCGATGTCTC 59.973 66.667 0.00 0.00 0.00 3.36
1829 5259 2.352915 GCTCCGCTCGATGTCTCG 60.353 66.667 0.00 0.00 46.41 4.04
1841 5271 3.023946 GATGTCTCGACCATCCTCATG 57.976 52.381 8.50 0.00 0.00 3.07
1848 5278 2.903855 CCATCCTCATGGCCACGC 60.904 66.667 8.16 0.00 43.55 5.34
1869 5299 4.587056 GGCCTGGCCTCCATTAAG 57.413 61.111 30.42 0.00 46.69 1.85
1870 5300 1.829970 GGCCTGGCCTCCATTAAGC 60.830 63.158 30.42 0.00 46.69 3.09
1872 5302 1.152673 CCTGGCCTCCATTAAGCCC 60.153 63.158 3.32 0.00 46.55 5.19
1873 5303 1.526917 CTGGCCTCCATTAAGCCCG 60.527 63.158 3.32 0.00 46.55 6.13
1874 5304 2.203351 GGCCTCCATTAAGCCCGG 60.203 66.667 0.00 0.00 41.00 5.73
1875 5305 2.907407 GCCTCCATTAAGCCCGGC 60.907 66.667 0.00 0.00 0.00 6.13
1876 5306 2.203351 CCTCCATTAAGCCCGGCC 60.203 66.667 5.55 0.00 0.00 6.13
1877 5307 2.203351 CTCCATTAAGCCCGGCCC 60.203 66.667 5.55 0.00 0.00 5.80
1878 5308 4.183858 TCCATTAAGCCCGGCCCG 62.184 66.667 5.55 0.00 0.00 6.13
1897 5327 4.938838 AGCCAAAAAGCTCTGCCT 57.061 50.000 0.00 0.00 39.48 4.75
1898 5328 2.348665 AGCCAAAAAGCTCTGCCTG 58.651 52.632 0.00 0.00 39.48 4.85
1899 5329 0.178981 AGCCAAAAAGCTCTGCCTGA 60.179 50.000 0.00 0.00 39.48 3.86
1900 5330 0.675633 GCCAAAAAGCTCTGCCTGAA 59.324 50.000 0.00 0.00 0.00 3.02
1901 5331 1.069049 GCCAAAAAGCTCTGCCTGAAA 59.931 47.619 0.00 0.00 0.00 2.69
1902 5332 2.289257 GCCAAAAAGCTCTGCCTGAAAT 60.289 45.455 0.00 0.00 0.00 2.17
1903 5333 3.582780 CCAAAAAGCTCTGCCTGAAATC 58.417 45.455 0.00 0.00 0.00 2.17
1904 5334 3.006110 CCAAAAAGCTCTGCCTGAAATCA 59.994 43.478 0.00 0.00 0.00 2.57
1905 5335 4.322499 CCAAAAAGCTCTGCCTGAAATCAT 60.322 41.667 0.00 0.00 0.00 2.45
1906 5336 4.451629 AAAAGCTCTGCCTGAAATCATG 57.548 40.909 0.00 0.00 0.00 3.07
1907 5337 2.054232 AGCTCTGCCTGAAATCATGG 57.946 50.000 0.00 0.00 0.00 3.66
1908 5338 1.562942 AGCTCTGCCTGAAATCATGGA 59.437 47.619 0.00 0.00 0.00 3.41
1909 5339 2.025605 AGCTCTGCCTGAAATCATGGAA 60.026 45.455 0.00 0.00 0.00 3.53
1910 5340 2.756760 GCTCTGCCTGAAATCATGGAAA 59.243 45.455 0.00 0.00 0.00 3.13
1911 5341 3.194116 GCTCTGCCTGAAATCATGGAAAA 59.806 43.478 0.00 0.00 0.00 2.29
1912 5342 4.677250 GCTCTGCCTGAAATCATGGAAAAG 60.677 45.833 0.00 0.00 0.00 2.27
1913 5343 4.665451 TCTGCCTGAAATCATGGAAAAGA 58.335 39.130 0.00 0.00 0.00 2.52
1914 5344 4.703575 TCTGCCTGAAATCATGGAAAAGAG 59.296 41.667 0.00 0.00 0.00 2.85
1915 5345 4.665451 TGCCTGAAATCATGGAAAAGAGA 58.335 39.130 0.00 0.00 0.00 3.10
1916 5346 5.078949 TGCCTGAAATCATGGAAAAGAGAA 58.921 37.500 0.00 0.00 0.00 2.87
1917 5347 5.184479 TGCCTGAAATCATGGAAAAGAGAAG 59.816 40.000 0.00 0.00 0.00 2.85
1918 5348 5.648572 CCTGAAATCATGGAAAAGAGAAGC 58.351 41.667 0.00 0.00 0.00 3.86
1919 5349 5.418209 CCTGAAATCATGGAAAAGAGAAGCT 59.582 40.000 0.00 0.00 0.00 3.74
1920 5350 6.071503 CCTGAAATCATGGAAAAGAGAAGCTT 60.072 38.462 0.00 0.00 38.88 3.74
1921 5351 6.684686 TGAAATCATGGAAAAGAGAAGCTTG 58.315 36.000 2.10 0.00 36.80 4.01
1922 5352 6.491062 TGAAATCATGGAAAAGAGAAGCTTGA 59.509 34.615 2.10 0.00 36.80 3.02
1923 5353 6.512342 AATCATGGAAAAGAGAAGCTTGAG 57.488 37.500 2.10 0.00 36.80 3.02
1924 5354 3.755378 TCATGGAAAAGAGAAGCTTGAGC 59.245 43.478 2.10 0.00 36.80 4.26
1925 5355 2.508526 TGGAAAAGAGAAGCTTGAGCC 58.491 47.619 2.10 0.00 43.38 4.70
1926 5356 2.107204 TGGAAAAGAGAAGCTTGAGCCT 59.893 45.455 2.10 0.00 43.38 4.58
1927 5357 2.487372 GGAAAAGAGAAGCTTGAGCCTG 59.513 50.000 2.10 0.00 43.38 4.85
1928 5358 3.406764 GAAAAGAGAAGCTTGAGCCTGA 58.593 45.455 2.10 0.00 43.38 3.86
1929 5359 2.470983 AAGAGAAGCTTGAGCCTGAC 57.529 50.000 2.10 0.00 43.38 3.51
1930 5360 0.612744 AGAGAAGCTTGAGCCTGACC 59.387 55.000 2.10 0.00 43.38 4.02
1931 5361 0.739112 GAGAAGCTTGAGCCTGACCG 60.739 60.000 2.10 0.00 43.38 4.79
1932 5362 1.743252 GAAGCTTGAGCCTGACCGG 60.743 63.158 2.10 0.00 43.38 5.28
1933 5363 2.172483 GAAGCTTGAGCCTGACCGGA 62.172 60.000 9.46 0.00 43.38 5.14
1934 5364 1.768684 AAGCTTGAGCCTGACCGGAA 61.769 55.000 9.46 0.00 43.38 4.30
1935 5365 2.035442 GCTTGAGCCTGACCGGAAC 61.035 63.158 9.46 1.77 34.31 3.62
1936 5366 1.674057 CTTGAGCCTGACCGGAACT 59.326 57.895 9.46 0.00 33.16 3.01
1937 5367 0.035458 CTTGAGCCTGACCGGAACTT 59.965 55.000 9.46 0.00 33.16 2.66
1938 5368 0.034896 TTGAGCCTGACCGGAACTTC 59.965 55.000 9.46 0.00 33.16 3.01
1939 5369 1.079057 GAGCCTGACCGGAACTTCC 60.079 63.158 9.46 0.00 33.16 3.46
1940 5370 1.536662 AGCCTGACCGGAACTTCCT 60.537 57.895 9.46 0.00 33.30 3.36
1941 5371 1.128188 AGCCTGACCGGAACTTCCTT 61.128 55.000 9.46 0.00 33.30 3.36
1942 5372 0.955919 GCCTGACCGGAACTTCCTTG 60.956 60.000 9.46 0.08 33.30 3.61
1943 5373 0.955919 CCTGACCGGAACTTCCTTGC 60.956 60.000 9.46 0.00 33.30 4.01
1944 5374 0.250295 CTGACCGGAACTTCCTTGCA 60.250 55.000 9.46 0.00 33.30 4.08
1945 5375 0.250295 TGACCGGAACTTCCTTGCAG 60.250 55.000 9.46 0.00 33.30 4.41
1946 5376 0.955919 GACCGGAACTTCCTTGCAGG 60.956 60.000 9.46 2.15 33.30 4.85
1947 5377 1.374947 CCGGAACTTCCTTGCAGGA 59.625 57.895 0.00 0.00 44.10 3.86
1948 5378 0.035056 CCGGAACTTCCTTGCAGGAT 60.035 55.000 0.00 0.00 45.34 3.24
1949 5379 1.089920 CGGAACTTCCTTGCAGGATG 58.910 55.000 6.25 6.94 45.34 3.51
1950 5380 1.467920 GGAACTTCCTTGCAGGATGG 58.532 55.000 16.79 10.95 45.34 3.51
1951 5381 1.004745 GGAACTTCCTTGCAGGATGGA 59.995 52.381 16.79 8.62 45.34 3.41
1952 5382 2.555227 GGAACTTCCTTGCAGGATGGAA 60.555 50.000 16.79 8.75 45.34 3.53
1958 5388 3.337834 TTGCAGGATGGAAAGCGAA 57.662 47.368 0.00 0.00 45.87 4.70
1959 5389 1.167851 TTGCAGGATGGAAAGCGAAG 58.832 50.000 0.00 0.00 45.87 3.79
1960 5390 0.036732 TGCAGGATGGAAAGCGAAGT 59.963 50.000 0.00 0.00 35.86 3.01
1961 5391 0.449388 GCAGGATGGAAAGCGAAGTG 59.551 55.000 0.00 0.00 35.86 3.16
1962 5392 0.449388 CAGGATGGAAAGCGAAGTGC 59.551 55.000 0.00 0.00 46.98 4.40
1971 5401 4.090057 GCGAAGTGCAAGCCCGTC 62.090 66.667 0.00 0.00 45.45 4.79
1972 5402 3.423154 CGAAGTGCAAGCCCGTCC 61.423 66.667 0.00 0.00 0.00 4.79
1973 5403 2.032681 GAAGTGCAAGCCCGTCCT 59.967 61.111 0.00 0.00 0.00 3.85
1974 5404 2.281761 AAGTGCAAGCCCGTCCTG 60.282 61.111 0.00 0.00 0.00 3.86
1975 5405 3.850098 AAGTGCAAGCCCGTCCTGG 62.850 63.158 0.00 0.00 37.55 4.45
1983 5413 3.411517 CCCGTCCTGGCCTGGATT 61.412 66.667 31.63 0.00 38.52 3.01
1984 5414 2.677228 CCGTCCTGGCCTGGATTT 59.323 61.111 31.63 0.00 38.52 2.17
1985 5415 1.000896 CCGTCCTGGCCTGGATTTT 60.001 57.895 31.63 0.00 38.52 1.82
1986 5416 0.611896 CCGTCCTGGCCTGGATTTTT 60.612 55.000 31.63 0.00 38.52 1.94
1987 5417 0.527565 CGTCCTGGCCTGGATTTTTG 59.472 55.000 31.63 16.42 38.52 2.44
1988 5418 0.897621 GTCCTGGCCTGGATTTTTGG 59.102 55.000 31.63 3.37 38.52 3.28
1989 5419 0.252193 TCCTGGCCTGGATTTTTGGG 60.252 55.000 26.46 0.00 0.00 4.12
1990 5420 1.598517 CTGGCCTGGATTTTTGGGC 59.401 57.895 3.32 0.00 45.24 5.36
1992 5422 2.578664 GCCTGGATTTTTGGGCCG 59.421 61.111 0.00 0.00 38.77 6.13
1993 5423 3.017771 GCCTGGATTTTTGGGCCGG 62.018 63.158 0.00 0.00 38.77 6.13
1994 5424 2.358372 CCTGGATTTTTGGGCCGGG 61.358 63.158 2.18 0.00 41.55 5.73
1995 5425 3.000233 TGGATTTTTGGGCCGGGC 61.000 61.111 22.00 22.00 0.00 6.13
1996 5426 2.683572 GGATTTTTGGGCCGGGCT 60.684 61.111 28.80 6.40 0.00 5.19
1997 5427 2.721167 GGATTTTTGGGCCGGGCTC 61.721 63.158 28.80 16.93 0.00 4.70
1998 5428 1.981853 GATTTTTGGGCCGGGCTCA 60.982 57.895 28.80 19.86 37.19 4.26
1999 5429 1.948721 GATTTTTGGGCCGGGCTCAG 61.949 60.000 28.80 0.00 41.35 3.35
2000 5430 4.676951 TTTTGGGCCGGGCTCAGG 62.677 66.667 28.80 0.00 41.35 3.86
2008 5438 3.790437 CGGGCTCAGGCTGTCCAT 61.790 66.667 22.83 0.00 38.73 3.41
2009 5439 2.124403 GGGCTCAGGCTGTCCATG 60.124 66.667 22.83 9.30 38.73 3.66
2010 5440 2.827642 GGCTCAGGCTGTCCATGC 60.828 66.667 15.27 11.58 38.73 4.06
2016 5446 4.052518 GGCTGTCCATGCCCAGGT 62.053 66.667 10.68 0.00 44.32 4.00
2017 5447 2.036256 GCTGTCCATGCCCAGGTT 59.964 61.111 10.68 0.00 0.00 3.50
2018 5448 1.607467 GCTGTCCATGCCCAGGTTT 60.607 57.895 10.68 0.00 0.00 3.27
2019 5449 0.323360 GCTGTCCATGCCCAGGTTTA 60.323 55.000 10.68 0.00 0.00 2.01
2020 5450 1.463674 CTGTCCATGCCCAGGTTTAC 58.536 55.000 2.73 0.00 0.00 2.01
2021 5451 1.004745 CTGTCCATGCCCAGGTTTACT 59.995 52.381 2.73 0.00 0.00 2.24
2022 5452 2.238646 CTGTCCATGCCCAGGTTTACTA 59.761 50.000 2.73 0.00 0.00 1.82
2023 5453 2.849943 TGTCCATGCCCAGGTTTACTAT 59.150 45.455 0.00 0.00 0.00 2.12
2024 5454 3.118038 TGTCCATGCCCAGGTTTACTATC 60.118 47.826 0.00 0.00 0.00 2.08
2025 5455 3.118038 GTCCATGCCCAGGTTTACTATCA 60.118 47.826 0.00 0.00 0.00 2.15
2026 5456 3.721575 TCCATGCCCAGGTTTACTATCAT 59.278 43.478 0.00 0.00 0.00 2.45
2027 5457 4.167892 TCCATGCCCAGGTTTACTATCATT 59.832 41.667 0.00 0.00 0.00 2.57
2028 5458 4.520492 CCATGCCCAGGTTTACTATCATTC 59.480 45.833 0.00 0.00 0.00 2.67
2029 5459 3.804036 TGCCCAGGTTTACTATCATTCG 58.196 45.455 0.00 0.00 0.00 3.34
2030 5460 3.199071 TGCCCAGGTTTACTATCATTCGT 59.801 43.478 0.00 0.00 0.00 3.85
2031 5461 3.560068 GCCCAGGTTTACTATCATTCGTG 59.440 47.826 0.00 0.00 0.00 4.35
2032 5462 4.682320 GCCCAGGTTTACTATCATTCGTGA 60.682 45.833 0.00 0.00 0.00 4.35
2033 5463 4.809426 CCCAGGTTTACTATCATTCGTGAC 59.191 45.833 0.00 0.00 0.00 3.67
2034 5464 4.503007 CCAGGTTTACTATCATTCGTGACG 59.497 45.833 0.00 0.00 0.00 4.35
2035 5465 5.100259 CAGGTTTACTATCATTCGTGACGT 58.900 41.667 4.40 0.00 0.00 4.34
2036 5466 5.004440 CAGGTTTACTATCATTCGTGACGTG 59.996 44.000 4.40 0.00 0.00 4.49
2037 5467 4.259690 GGTTTACTATCATTCGTGACGTGC 60.260 45.833 4.40 0.00 0.00 5.34
2038 5468 2.941453 ACTATCATTCGTGACGTGCT 57.059 45.000 4.40 0.00 0.00 4.40
2039 5469 2.798680 ACTATCATTCGTGACGTGCTC 58.201 47.619 4.40 0.00 0.00 4.26
2040 5470 2.163613 ACTATCATTCGTGACGTGCTCA 59.836 45.455 4.40 0.00 0.00 4.26
2041 5471 1.633561 ATCATTCGTGACGTGCTCAG 58.366 50.000 4.40 0.00 0.00 3.35
2042 5472 1.008875 TCATTCGTGACGTGCTCAGC 61.009 55.000 4.40 0.00 0.00 4.26
2043 5473 1.006220 ATTCGTGACGTGCTCAGCA 60.006 52.632 4.40 0.00 35.60 4.41
2044 5474 0.599991 ATTCGTGACGTGCTCAGCAA 60.600 50.000 0.00 0.00 41.47 3.91
2045 5475 0.599991 TTCGTGACGTGCTCAGCAAT 60.600 50.000 0.00 0.00 41.47 3.56
2046 5476 1.008875 TCGTGACGTGCTCAGCAATC 61.009 55.000 0.00 2.52 41.47 2.67
2047 5477 1.790387 GTGACGTGCTCAGCAATCC 59.210 57.895 0.00 0.00 41.47 3.01
2048 5478 1.737735 TGACGTGCTCAGCAATCCG 60.738 57.895 0.00 3.18 41.47 4.18
2049 5479 3.088500 GACGTGCTCAGCAATCCGC 62.089 63.158 0.00 0.00 41.47 5.54
2050 5480 3.869272 CGTGCTCAGCAATCCGCC 61.869 66.667 0.00 0.00 41.47 6.13
2051 5481 3.869272 GTGCTCAGCAATCCGCCG 61.869 66.667 0.00 0.00 41.47 6.46
2147 5577 1.943968 GCAGTTGGTGAATAGTCCGCA 60.944 52.381 0.00 0.00 0.00 5.69
2148 5578 2.632377 CAGTTGGTGAATAGTCCGCAT 58.368 47.619 0.00 0.00 0.00 4.73
2180 5610 4.250464 TCGCTGGTTTATTTTCGTCATCT 58.750 39.130 0.00 0.00 0.00 2.90
2181 5611 4.693566 TCGCTGGTTTATTTTCGTCATCTT 59.306 37.500 0.00 0.00 0.00 2.40
2182 5612 5.180492 TCGCTGGTTTATTTTCGTCATCTTT 59.820 36.000 0.00 0.00 0.00 2.52
2183 5613 5.856455 CGCTGGTTTATTTTCGTCATCTTTT 59.144 36.000 0.00 0.00 0.00 2.27
2184 5614 6.032460 CGCTGGTTTATTTTCGTCATCTTTTC 59.968 38.462 0.00 0.00 0.00 2.29
2216 5647 2.691409 TTTCGTCATCATCCCACCTC 57.309 50.000 0.00 0.00 0.00 3.85
2255 7485 4.943373 AAAAACCCTCGTGCCCAT 57.057 50.000 0.00 0.00 0.00 4.00
2256 7486 2.350738 AAAAACCCTCGTGCCCATG 58.649 52.632 0.00 0.00 0.00 3.66
2269 7499 2.440946 CCCATGGCAGATCGGTCTA 58.559 57.895 6.09 0.00 32.09 2.59
2383 7635 4.980805 GGCCGCCGTCACACAGAA 62.981 66.667 0.00 0.00 0.00 3.02
2384 7636 3.414700 GCCGCCGTCACACAGAAG 61.415 66.667 0.00 0.00 0.00 2.85
2385 7637 2.338620 CCGCCGTCACACAGAAGA 59.661 61.111 0.00 0.00 0.00 2.87
2390 7642 3.538841 GTCACACAGAAGACGCCG 58.461 61.111 0.00 0.00 0.00 6.46
2391 7643 2.355837 TCACACAGAAGACGCCGC 60.356 61.111 0.00 0.00 0.00 6.53
2411 7663 2.649975 GGATCGCGTCCACGTACG 60.650 66.667 15.01 15.01 46.96 3.67
2412 7664 2.649975 GATCGCGTCCACGTACGG 60.650 66.667 21.06 8.46 43.06 4.02
2452 9363 2.430921 CGCAGGGACACGTGTCTC 60.431 66.667 39.01 37.64 45.72 3.36
2454 9365 2.867855 GCAGGGACACGTGTCTCCA 61.868 63.158 38.27 0.00 46.53 3.86
2455 9366 1.975327 CAGGGACACGTGTCTCCAT 59.025 57.895 38.27 23.92 46.53 3.41
2457 9368 1.153823 GGGACACGTGTCTCCATCG 60.154 63.158 39.01 5.42 44.20 3.84
2458 9369 1.592400 GGGACACGTGTCTCCATCGA 61.592 60.000 39.01 0.00 44.20 3.59
2459 9370 0.456221 GGACACGTGTCTCCATCGAT 59.544 55.000 39.01 8.16 44.20 3.59
2460 9371 1.534175 GGACACGTGTCTCCATCGATC 60.534 57.143 39.01 20.84 44.20 3.69
2462 9373 0.249073 CACGTGTCTCCATCGATCCC 60.249 60.000 7.58 0.00 0.00 3.85
2464 9375 1.109920 CGTGTCTCCATCGATCCCCT 61.110 60.000 0.00 0.00 0.00 4.79
2466 9377 0.558220 TGTCTCCATCGATCCCCTCT 59.442 55.000 0.00 0.00 0.00 3.69
2467 9378 1.062886 TGTCTCCATCGATCCCCTCTT 60.063 52.381 0.00 0.00 0.00 2.85
2468 9379 1.616374 GTCTCCATCGATCCCCTCTTC 59.384 57.143 0.00 0.00 0.00 2.87
2469 9380 0.600557 CTCCATCGATCCCCTCTTCG 59.399 60.000 0.00 0.00 36.72 3.79
2470 9381 0.827925 TCCATCGATCCCCTCTTCGG 60.828 60.000 0.00 0.00 36.08 4.30
2471 9382 0.827925 CCATCGATCCCCTCTTCGGA 60.828 60.000 0.00 0.00 36.08 4.55
2472 9383 1.261480 CATCGATCCCCTCTTCGGAT 58.739 55.000 0.00 0.00 43.03 4.18
2475 9386 1.290639 GATCCCCTCTTCGGATCGC 59.709 63.158 1.29 0.00 44.77 4.58
2476 9387 2.161078 GATCCCCTCTTCGGATCGCC 62.161 65.000 1.29 0.00 44.77 5.54
2477 9388 2.664835 ATCCCCTCTTCGGATCGCCT 62.665 60.000 0.00 0.00 34.98 5.52
2478 9389 2.731374 CCCTCTTCGGATCGCCTC 59.269 66.667 0.00 0.00 33.16 4.70
2479 9390 2.731374 CCTCTTCGGATCGCCTCC 59.269 66.667 0.00 0.00 41.07 4.30
2480 9391 1.830408 CCTCTTCGGATCGCCTCCT 60.830 63.158 2.89 0.00 42.47 3.69
2481 9392 1.657556 CTCTTCGGATCGCCTCCTC 59.342 63.158 2.89 0.00 42.47 3.71
2482 9393 1.801309 CTCTTCGGATCGCCTCCTCC 61.801 65.000 2.89 0.00 42.47 4.30
2491 9402 4.083862 GCCTCCTCCGCCGTTTCT 62.084 66.667 0.00 0.00 0.00 2.52
2492 9403 2.184579 CCTCCTCCGCCGTTTCTC 59.815 66.667 0.00 0.00 0.00 2.87
2493 9404 2.184579 CTCCTCCGCCGTTTCTCC 59.815 66.667 0.00 0.00 0.00 3.71
2494 9405 2.602267 TCCTCCGCCGTTTCTCCA 60.602 61.111 0.00 0.00 0.00 3.86
2495 9406 2.125512 CCTCCGCCGTTTCTCCAG 60.126 66.667 0.00 0.00 0.00 3.86
2496 9407 2.646175 CCTCCGCCGTTTCTCCAGA 61.646 63.158 0.00 0.00 0.00 3.86
2497 9408 1.517832 CTCCGCCGTTTCTCCAGAT 59.482 57.895 0.00 0.00 0.00 2.90
2498 9409 0.528684 CTCCGCCGTTTCTCCAGATC 60.529 60.000 0.00 0.00 0.00 2.75
2499 9410 1.878522 CCGCCGTTTCTCCAGATCG 60.879 63.158 0.00 0.00 0.00 3.69
2500 9411 2.517450 CGCCGTTTCTCCAGATCGC 61.517 63.158 0.00 0.00 0.00 4.58
2501 9412 2.174319 GCCGTTTCTCCAGATCGCC 61.174 63.158 0.00 0.00 0.00 5.54
2502 9413 1.218047 CCGTTTCTCCAGATCGCCA 59.782 57.895 0.00 0.00 0.00 5.69
2503 9414 0.179073 CCGTTTCTCCAGATCGCCAT 60.179 55.000 0.00 0.00 0.00 4.40
2504 9415 1.212616 CGTTTCTCCAGATCGCCATC 58.787 55.000 0.00 0.00 0.00 3.51
2505 9416 1.202463 CGTTTCTCCAGATCGCCATCT 60.202 52.381 0.00 0.00 40.32 2.90
2506 9417 2.478831 GTTTCTCCAGATCGCCATCTC 58.521 52.381 0.00 0.00 37.25 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 9.613428 CAGTATTTCCATACTTTTGATAGACCA 57.387 33.333 0.00 0.00 42.73 4.02
24 25 9.614792 ACAGTATTTCCATACTTTTGATAGACC 57.385 33.333 0.00 0.00 42.73 3.85
29 30 8.883731 CGAGAACAGTATTTCCATACTTTTGAT 58.116 33.333 0.00 0.00 42.73 2.57
30 31 8.092068 TCGAGAACAGTATTTCCATACTTTTGA 58.908 33.333 0.00 0.00 42.73 2.69
31 32 8.251750 TCGAGAACAGTATTTCCATACTTTTG 57.748 34.615 0.00 0.00 42.73 2.44
32 33 8.842358 TTCGAGAACAGTATTTCCATACTTTT 57.158 30.769 0.00 0.00 42.73 2.27
33 34 8.842358 TTTCGAGAACAGTATTTCCATACTTT 57.158 30.769 0.00 0.00 42.73 2.66
34 35 8.842358 TTTTCGAGAACAGTATTTCCATACTT 57.158 30.769 0.00 0.00 42.73 2.24
35 36 8.842358 TTTTTCGAGAACAGTATTTCCATACT 57.158 30.769 0.00 0.00 45.72 2.12
93 94 3.134574 AGCTTTCACGTGGTATTTCCA 57.865 42.857 17.00 0.00 45.01 3.53
94 95 3.063588 GCTAGCTTTCACGTGGTATTTCC 59.936 47.826 17.00 0.00 0.00 3.13
95 96 3.063588 GGCTAGCTTTCACGTGGTATTTC 59.936 47.826 17.00 0.69 0.00 2.17
96 97 3.007635 GGCTAGCTTTCACGTGGTATTT 58.992 45.455 17.00 1.92 0.00 1.40
97 98 2.236395 AGGCTAGCTTTCACGTGGTATT 59.764 45.455 17.00 0.81 0.00 1.89
98 99 1.831736 AGGCTAGCTTTCACGTGGTAT 59.168 47.619 17.00 0.35 0.00 2.73
99 100 1.263356 AGGCTAGCTTTCACGTGGTA 58.737 50.000 17.00 0.93 0.00 3.25
100 101 1.204941 CTAGGCTAGCTTTCACGTGGT 59.795 52.381 17.00 0.00 0.00 4.16
101 102 1.927895 CTAGGCTAGCTTTCACGTGG 58.072 55.000 17.00 0.08 0.00 4.94
112 113 0.106335 ATGCAGTGCAGCTAGGCTAG 59.894 55.000 24.20 17.33 43.65 3.42
113 114 0.179065 CATGCAGTGCAGCTAGGCTA 60.179 55.000 24.20 0.00 43.65 3.93
114 115 1.451567 CATGCAGTGCAGCTAGGCT 60.452 57.895 24.20 1.03 43.65 4.58
115 116 2.478890 CCATGCAGTGCAGCTAGGC 61.479 63.158 24.20 0.00 43.65 3.93
116 117 2.478890 GCCATGCAGTGCAGCTAGG 61.479 63.158 24.20 21.04 43.65 3.02
117 118 2.820619 CGCCATGCAGTGCAGCTAG 61.821 63.158 24.20 12.40 43.65 3.42
118 119 2.820922 CGCCATGCAGTGCAGCTA 60.821 61.111 24.20 0.00 43.65 3.32
129 130 2.595463 AATGATCCCGGCGCCATG 60.595 61.111 28.98 16.97 0.00 3.66
130 131 2.281761 GAATGATCCCGGCGCCAT 60.282 61.111 28.98 13.10 0.00 4.40
131 132 3.479203 AGAATGATCCCGGCGCCA 61.479 61.111 28.98 7.49 0.00 5.69
132 133 2.974698 CAGAATGATCCCGGCGCC 60.975 66.667 19.07 19.07 39.69 6.53
133 134 3.654020 GCAGAATGATCCCGGCGC 61.654 66.667 0.00 0.00 39.69 6.53
134 135 1.502163 GAAGCAGAATGATCCCGGCG 61.502 60.000 0.00 0.00 39.69 6.46
135 136 1.169034 GGAAGCAGAATGATCCCGGC 61.169 60.000 0.00 0.00 39.69 6.13
136 137 3.012560 GGAAGCAGAATGATCCCGG 57.987 57.895 0.00 0.00 39.69 5.73
139 140 1.876322 CGAGGGAAGCAGAATGATCC 58.124 55.000 0.00 0.00 41.31 3.36
140 141 1.224965 GCGAGGGAAGCAGAATGATC 58.775 55.000 0.00 0.00 39.69 2.92
141 142 0.531532 CGCGAGGGAAGCAGAATGAT 60.532 55.000 0.00 0.00 39.69 2.45
142 143 1.153568 CGCGAGGGAAGCAGAATGA 60.154 57.895 0.00 0.00 39.69 2.57
143 144 1.448540 ACGCGAGGGAAGCAGAATG 60.449 57.895 15.93 0.00 40.87 2.67
144 145 1.448540 CACGCGAGGGAAGCAGAAT 60.449 57.895 15.93 0.00 35.60 2.40
145 146 2.048222 CACGCGAGGGAAGCAGAA 60.048 61.111 15.93 0.00 35.60 3.02
146 147 4.742201 GCACGCGAGGGAAGCAGA 62.742 66.667 15.93 0.00 35.60 4.26
150 151 3.997064 CTCCTGCACGCGAGGGAAG 62.997 68.421 15.93 5.58 41.12 3.46
151 152 4.069232 CTCCTGCACGCGAGGGAA 62.069 66.667 15.93 0.00 35.60 3.97
153 154 4.504916 CTCTCCTGCACGCGAGGG 62.505 72.222 15.93 9.13 37.78 4.30
155 156 2.660553 CTAGCTCTCCTGCACGCGAG 62.661 65.000 15.93 5.97 34.99 5.03
156 157 2.750237 TAGCTCTCCTGCACGCGA 60.750 61.111 15.93 0.00 34.99 5.87
157 158 2.278466 CTAGCTCTCCTGCACGCG 60.278 66.667 3.53 3.53 34.99 6.01
158 159 2.584694 GCTAGCTCTCCTGCACGC 60.585 66.667 7.70 0.00 34.99 5.34
159 160 1.103987 TAGGCTAGCTCTCCTGCACG 61.104 60.000 15.72 0.00 34.02 5.34
160 161 0.673437 CTAGGCTAGCTCTCCTGCAC 59.327 60.000 15.72 0.00 34.02 4.57
161 162 3.123943 CTAGGCTAGCTCTCCTGCA 57.876 57.895 15.72 0.00 34.02 4.41
171 172 1.591059 CGCAGTGCAGCTAGGCTAG 60.591 63.158 17.33 17.33 36.40 3.42
172 173 2.351244 ACGCAGTGCAGCTAGGCTA 61.351 57.895 16.83 0.00 42.51 3.93
173 174 3.699894 ACGCAGTGCAGCTAGGCT 61.700 61.111 16.83 0.00 42.51 4.58
185 186 4.767255 GGACCAGGAGCCACGCAG 62.767 72.222 0.00 0.00 0.00 5.18
188 189 3.934391 GAACGGACCAGGAGCCACG 62.934 68.421 0.00 0.00 0.00 4.94
189 190 2.047179 GAACGGACCAGGAGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
190 191 3.691342 CGAACGGACCAGGAGCCA 61.691 66.667 0.00 0.00 0.00 4.75
191 192 4.452733 CCGAACGGACCAGGAGCC 62.453 72.222 7.53 0.00 37.50 4.70
192 193 3.236003 AACCGAACGGACCAGGAGC 62.236 63.158 20.14 0.00 38.96 4.70
193 194 1.080025 GAACCGAACGGACCAGGAG 60.080 63.158 20.14 0.00 38.96 3.69
194 195 2.922950 CGAACCGAACGGACCAGGA 61.923 63.158 20.14 0.00 38.96 3.86
195 196 2.431942 CGAACCGAACGGACCAGG 60.432 66.667 20.14 0.00 38.96 4.45
196 197 3.110178 GCGAACCGAACGGACCAG 61.110 66.667 20.14 8.86 38.96 4.00
197 198 3.562779 GAGCGAACCGAACGGACCA 62.563 63.158 20.14 0.00 38.96 4.02
198 199 2.808321 GAGCGAACCGAACGGACC 60.808 66.667 20.14 9.42 38.96 4.46
199 200 2.808321 GGAGCGAACCGAACGGAC 60.808 66.667 20.14 11.63 38.96 4.79
200 201 2.858862 TTGGAGCGAACCGAACGGA 61.859 57.895 20.14 0.00 38.96 4.69
201 202 2.356553 TTGGAGCGAACCGAACGG 60.357 61.111 11.83 11.83 42.03 4.44
202 203 2.851104 GTTGGAGCGAACCGAACG 59.149 61.111 0.00 0.00 0.00 3.95
203 204 2.851104 CGTTGGAGCGAACCGAAC 59.149 61.111 0.00 0.00 0.00 3.95
204 205 3.039588 GCGTTGGAGCGAACCGAA 61.040 61.111 0.00 0.00 0.00 4.30
205 206 4.287781 TGCGTTGGAGCGAACCGA 62.288 61.111 0.00 0.00 40.67 4.69
206 207 4.072088 GTGCGTTGGAGCGAACCG 62.072 66.667 0.00 0.00 40.67 4.44
207 208 2.240612 GATGTGCGTTGGAGCGAACC 62.241 60.000 0.00 0.00 39.55 3.62
208 209 1.132640 GATGTGCGTTGGAGCGAAC 59.867 57.895 0.00 0.00 40.63 3.95
209 210 2.032634 GGATGTGCGTTGGAGCGAA 61.033 57.895 0.00 0.00 40.67 4.70
210 211 2.434185 GGATGTGCGTTGGAGCGA 60.434 61.111 0.00 0.00 40.67 4.93
211 212 3.853330 CGGATGTGCGTTGGAGCG 61.853 66.667 0.00 0.00 40.67 5.03
212 213 2.434185 TCGGATGTGCGTTGGAGC 60.434 61.111 0.00 0.00 37.71 4.70
213 214 2.100631 GGTCGGATGTGCGTTGGAG 61.101 63.158 0.00 0.00 0.00 3.86
214 215 2.047655 GGTCGGATGTGCGTTGGA 60.048 61.111 0.00 0.00 0.00 3.53
215 216 2.233605 TAGGGTCGGATGTGCGTTGG 62.234 60.000 0.00 0.00 0.00 3.77
216 217 1.082117 GTAGGGTCGGATGTGCGTTG 61.082 60.000 0.00 0.00 0.00 4.10
217 218 1.217244 GTAGGGTCGGATGTGCGTT 59.783 57.895 0.00 0.00 0.00 4.84
218 219 2.890371 GTAGGGTCGGATGTGCGT 59.110 61.111 0.00 0.00 0.00 5.24
219 220 2.278596 CGTAGGGTCGGATGTGCG 60.279 66.667 0.00 0.00 0.00 5.34
220 221 1.065928 CTCGTAGGGTCGGATGTGC 59.934 63.158 0.00 0.00 0.00 4.57
221 222 0.663688 CTCTCGTAGGGTCGGATGTG 59.336 60.000 0.00 0.00 0.00 3.21
222 223 0.545171 TCTCTCGTAGGGTCGGATGT 59.455 55.000 0.00 0.00 0.00 3.06
223 224 1.676746 TTCTCTCGTAGGGTCGGATG 58.323 55.000 0.00 0.00 0.00 3.51
224 225 2.092538 TCTTTCTCTCGTAGGGTCGGAT 60.093 50.000 0.00 0.00 0.00 4.18
225 226 1.280133 TCTTTCTCTCGTAGGGTCGGA 59.720 52.381 0.00 0.00 0.00 4.55
226 227 1.401199 GTCTTTCTCTCGTAGGGTCGG 59.599 57.143 0.00 0.00 0.00 4.79
227 228 1.062294 CGTCTTTCTCTCGTAGGGTCG 59.938 57.143 0.00 0.00 0.00 4.79
228 229 2.352342 CTCGTCTTTCTCTCGTAGGGTC 59.648 54.545 0.00 0.00 0.00 4.46
229 230 2.027377 TCTCGTCTTTCTCTCGTAGGGT 60.027 50.000 0.00 0.00 0.00 4.34
230 231 2.610374 CTCTCGTCTTTCTCTCGTAGGG 59.390 54.545 0.00 0.00 0.00 3.53
231 232 3.523547 TCTCTCGTCTTTCTCTCGTAGG 58.476 50.000 0.00 0.00 0.00 3.18
232 233 3.554324 CCTCTCTCGTCTTTCTCTCGTAG 59.446 52.174 0.00 0.00 0.00 3.51
233 234 3.195182 TCCTCTCTCGTCTTTCTCTCGTA 59.805 47.826 0.00 0.00 0.00 3.43
234 235 2.027929 TCCTCTCTCGTCTTTCTCTCGT 60.028 50.000 0.00 0.00 0.00 4.18
235 236 2.350498 GTCCTCTCTCGTCTTTCTCTCG 59.650 54.545 0.00 0.00 0.00 4.04
236 237 2.350498 CGTCCTCTCTCGTCTTTCTCTC 59.650 54.545 0.00 0.00 0.00 3.20
237 238 2.352388 CGTCCTCTCTCGTCTTTCTCT 58.648 52.381 0.00 0.00 0.00 3.10
238 239 1.399089 CCGTCCTCTCTCGTCTTTCTC 59.601 57.143 0.00 0.00 0.00 2.87
239 240 1.003349 TCCGTCCTCTCTCGTCTTTCT 59.997 52.381 0.00 0.00 0.00 2.52
240 241 1.130938 GTCCGTCCTCTCTCGTCTTTC 59.869 57.143 0.00 0.00 0.00 2.62
244 245 1.694955 GACGTCCGTCCTCTCTCGTC 61.695 65.000 3.51 0.00 39.08 4.20
266 267 1.515521 GGGCTTCTTGGTGTTGTCCG 61.516 60.000 0.00 0.00 0.00 4.79
268 269 1.949257 CGGGCTTCTTGGTGTTGTC 59.051 57.895 0.00 0.00 0.00 3.18
273 274 0.605319 TAGTTGCGGGCTTCTTGGTG 60.605 55.000 0.00 0.00 0.00 4.17
274 275 0.328258 ATAGTTGCGGGCTTCTTGGT 59.672 50.000 0.00 0.00 0.00 3.67
275 276 0.734889 CATAGTTGCGGGCTTCTTGG 59.265 55.000 0.00 0.00 0.00 3.61
294 296 1.754226 TGGCCTGGTTGTGTTTTTCTC 59.246 47.619 3.32 0.00 0.00 2.87
314 316 4.988716 TCGGCGGACCTGACCAGT 62.989 66.667 7.21 0.00 0.00 4.00
383 390 1.478916 CAGTTGATTGCCATGATGCCA 59.521 47.619 0.00 0.00 0.00 4.92
384 391 1.202486 CCAGTTGATTGCCATGATGCC 60.202 52.381 0.00 0.00 0.00 4.40
385 392 1.479323 ACCAGTTGATTGCCATGATGC 59.521 47.619 0.00 0.00 0.00 3.91
386 393 2.756207 TGACCAGTTGATTGCCATGATG 59.244 45.455 0.00 0.00 0.00 3.07
387 394 3.021695 CTGACCAGTTGATTGCCATGAT 58.978 45.455 0.00 0.00 0.00 2.45
388 395 2.439409 CTGACCAGTTGATTGCCATGA 58.561 47.619 0.00 0.00 0.00 3.07
389 396 1.475280 CCTGACCAGTTGATTGCCATG 59.525 52.381 0.00 0.00 0.00 3.66
390 397 1.076024 ACCTGACCAGTTGATTGCCAT 59.924 47.619 0.00 0.00 0.00 4.40
391 398 0.478072 ACCTGACCAGTTGATTGCCA 59.522 50.000 0.00 0.00 0.00 4.92
409 416 1.294659 CTCGCAGGCACAAGAAGGAC 61.295 60.000 0.00 0.00 0.00 3.85
410 417 1.004560 CTCGCAGGCACAAGAAGGA 60.005 57.895 0.00 0.00 0.00 3.36
411 418 0.603707 TTCTCGCAGGCACAAGAAGG 60.604 55.000 0.00 0.00 0.00 3.46
412 419 0.795085 CTTCTCGCAGGCACAAGAAG 59.205 55.000 11.29 11.29 38.93 2.85
413 420 0.392706 TCTTCTCGCAGGCACAAGAA 59.607 50.000 0.00 0.00 0.00 2.52
414 421 0.392706 TTCTTCTCGCAGGCACAAGA 59.607 50.000 0.00 0.00 0.00 3.02
415 422 0.795085 CTTCTTCTCGCAGGCACAAG 59.205 55.000 0.00 0.00 0.00 3.16
416 423 0.392706 TCTTCTTCTCGCAGGCACAA 59.607 50.000 0.00 0.00 0.00 3.33
417 424 0.037882 CTCTTCTTCTCGCAGGCACA 60.038 55.000 0.00 0.00 0.00 4.57
418 425 0.244994 TCTCTTCTTCTCGCAGGCAC 59.755 55.000 0.00 0.00 0.00 5.01
419 426 0.244994 GTCTCTTCTTCTCGCAGGCA 59.755 55.000 0.00 0.00 0.00 4.75
420 427 0.530288 AGTCTCTTCTTCTCGCAGGC 59.470 55.000 0.00 0.00 0.00 4.85
421 428 4.576873 TGTATAGTCTCTTCTTCTCGCAGG 59.423 45.833 0.00 0.00 0.00 4.85
422 429 5.743026 TGTATAGTCTCTTCTTCTCGCAG 57.257 43.478 0.00 0.00 0.00 5.18
423 430 5.449314 GCTTGTATAGTCTCTTCTTCTCGCA 60.449 44.000 0.00 0.00 0.00 5.10
424 431 4.973663 GCTTGTATAGTCTCTTCTTCTCGC 59.026 45.833 0.00 0.00 0.00 5.03
425 432 6.125327 TGCTTGTATAGTCTCTTCTTCTCG 57.875 41.667 0.00 0.00 0.00 4.04
426 433 6.978080 CCTTGCTTGTATAGTCTCTTCTTCTC 59.022 42.308 0.00 0.00 0.00 2.87
427 434 6.629291 GCCTTGCTTGTATAGTCTCTTCTTCT 60.629 42.308 0.00 0.00 0.00 2.85
428 435 5.522097 GCCTTGCTTGTATAGTCTCTTCTTC 59.478 44.000 0.00 0.00 0.00 2.87
429 436 5.188751 AGCCTTGCTTGTATAGTCTCTTCTT 59.811 40.000 0.00 0.00 33.89 2.52
430 437 4.714308 AGCCTTGCTTGTATAGTCTCTTCT 59.286 41.667 0.00 0.00 33.89 2.85
431 438 4.808364 CAGCCTTGCTTGTATAGTCTCTTC 59.192 45.833 0.00 0.00 36.40 2.87
432 439 4.223923 ACAGCCTTGCTTGTATAGTCTCTT 59.776 41.667 0.00 0.00 36.40 2.85
433 440 3.772025 ACAGCCTTGCTTGTATAGTCTCT 59.228 43.478 0.00 0.00 36.40 3.10
434 441 4.130286 ACAGCCTTGCTTGTATAGTCTC 57.870 45.455 0.00 0.00 36.40 3.36
435 442 4.559862 AACAGCCTTGCTTGTATAGTCT 57.440 40.909 0.00 0.00 36.40 3.24
438 445 3.762779 GCAAACAGCCTTGCTTGTATAG 58.237 45.455 8.18 0.00 46.66 1.31
450 457 0.961019 TCACCTCAATGCAAACAGCC 59.039 50.000 0.00 0.00 44.83 4.85
516 524 2.355818 GGGCCGACTAGAAATTGGACTT 60.356 50.000 0.00 0.00 0.00 3.01
553 604 8.616076 ACTTTGATATTTATGCTGTTGCTAGAC 58.384 33.333 0.00 0.00 40.48 2.59
596 647 4.995487 GTGTTACTCCTACACCCTTGAAAG 59.005 45.833 0.00 0.00 39.93 2.62
597 648 4.657039 AGTGTTACTCCTACACCCTTGAAA 59.343 41.667 0.00 0.00 45.42 2.69
598 649 4.228824 AGTGTTACTCCTACACCCTTGAA 58.771 43.478 0.00 0.00 45.42 2.69
601 656 4.228824 TCAAGTGTTACTCCTACACCCTT 58.771 43.478 0.00 0.00 45.42 3.95
648 846 3.809279 TGCATGCATCGTACCTATTCTTG 59.191 43.478 18.46 0.00 0.00 3.02
649 847 3.809832 GTGCATGCATCGTACCTATTCTT 59.190 43.478 25.64 0.00 0.00 2.52
650 848 3.181466 TGTGCATGCATCGTACCTATTCT 60.181 43.478 25.64 0.00 0.00 2.40
651 849 3.130633 TGTGCATGCATCGTACCTATTC 58.869 45.455 25.64 6.62 0.00 1.75
652 850 3.133691 CTGTGCATGCATCGTACCTATT 58.866 45.455 25.64 0.00 0.00 1.73
653 851 2.548707 CCTGTGCATGCATCGTACCTAT 60.549 50.000 25.64 0.00 0.00 2.57
654 852 1.202521 CCTGTGCATGCATCGTACCTA 60.203 52.381 25.64 0.00 0.00 3.08
655 853 0.462581 CCTGTGCATGCATCGTACCT 60.463 55.000 25.64 0.00 0.00 3.08
656 854 0.744414 ACCTGTGCATGCATCGTACC 60.744 55.000 25.64 10.35 0.00 3.34
657 855 0.652592 GACCTGTGCATGCATCGTAC 59.347 55.000 25.64 11.15 0.00 3.67
658 856 0.536724 AGACCTGTGCATGCATCGTA 59.463 50.000 25.64 9.97 0.00 3.43
659 857 0.742281 GAGACCTGTGCATGCATCGT 60.742 55.000 25.64 19.25 0.00 3.73
660 858 0.741927 TGAGACCTGTGCATGCATCG 60.742 55.000 25.64 17.14 0.00 3.84
661 859 1.131883 GTTGAGACCTGTGCATGCATC 59.868 52.381 25.64 17.15 0.00 3.91
662 860 1.171308 GTTGAGACCTGTGCATGCAT 58.829 50.000 25.64 7.59 0.00 3.96
663 861 0.179023 TGTTGAGACCTGTGCATGCA 60.179 50.000 18.46 18.46 0.00 3.96
664 862 0.239347 GTGTTGAGACCTGTGCATGC 59.761 55.000 11.82 11.82 0.00 4.06
665 863 0.877071 GGTGTTGAGACCTGTGCATG 59.123 55.000 0.00 0.00 32.69 4.06
666 864 0.767375 AGGTGTTGAGACCTGTGCAT 59.233 50.000 0.00 0.00 45.20 3.96
667 865 0.546122 AAGGTGTTGAGACCTGTGCA 59.454 50.000 0.02 0.00 46.29 4.57
668 866 1.334869 CAAAGGTGTTGAGACCTGTGC 59.665 52.381 4.72 0.00 46.29 4.57
670 868 1.680338 GCAAAGGTGTTGAGACCTGT 58.320 50.000 0.02 0.00 46.29 4.00
671 869 0.954452 GGCAAAGGTGTTGAGACCTG 59.046 55.000 0.02 0.00 46.29 4.00
673 871 1.239347 GAGGCAAAGGTGTTGAGACC 58.761 55.000 0.00 0.00 36.09 3.85
674 872 1.876156 CTGAGGCAAAGGTGTTGAGAC 59.124 52.381 0.00 0.00 0.00 3.36
675 873 1.202806 CCTGAGGCAAAGGTGTTGAGA 60.203 52.381 0.00 0.00 0.00 3.27
676 874 1.242076 CCTGAGGCAAAGGTGTTGAG 58.758 55.000 0.00 0.00 0.00 3.02
677 875 0.178992 CCCTGAGGCAAAGGTGTTGA 60.179 55.000 0.00 0.00 32.45 3.18
678 876 0.468029 ACCCTGAGGCAAAGGTGTTG 60.468 55.000 0.00 0.00 36.11 3.33
679 877 0.468029 CACCCTGAGGCAAAGGTGTT 60.468 55.000 0.00 0.00 43.91 3.32
680 878 1.151450 CACCCTGAGGCAAAGGTGT 59.849 57.895 0.00 2.17 43.91 4.16
681 879 4.085876 CACCCTGAGGCAAAGGTG 57.914 61.111 0.00 3.62 43.50 4.00
682 880 2.069165 GACCACCCTGAGGCAAAGGT 62.069 60.000 0.00 0.00 36.11 3.50
683 881 1.303643 GACCACCCTGAGGCAAAGG 60.304 63.158 0.00 0.00 36.11 3.11
684 882 0.038744 ATGACCACCCTGAGGCAAAG 59.961 55.000 0.00 0.00 36.11 2.77
685 883 1.281867 CTATGACCACCCTGAGGCAAA 59.718 52.381 0.00 0.00 36.11 3.68
686 884 0.911769 CTATGACCACCCTGAGGCAA 59.088 55.000 0.00 0.00 36.11 4.52
687 885 0.252696 ACTATGACCACCCTGAGGCA 60.253 55.000 0.00 0.00 36.11 4.75
688 886 0.179000 CACTATGACCACCCTGAGGC 59.821 60.000 0.00 0.00 36.11 4.70
689 887 0.833287 CCACTATGACCACCCTGAGG 59.167 60.000 0.00 0.00 40.04 3.86
690 888 0.833287 CCCACTATGACCACCCTGAG 59.167 60.000 0.00 0.00 0.00 3.35
691 889 0.620410 CCCCACTATGACCACCCTGA 60.620 60.000 0.00 0.00 0.00 3.86
692 890 0.620410 TCCCCACTATGACCACCCTG 60.620 60.000 0.00 0.00 0.00 4.45
693 891 0.326618 CTCCCCACTATGACCACCCT 60.327 60.000 0.00 0.00 0.00 4.34
694 892 0.620700 ACTCCCCACTATGACCACCC 60.621 60.000 0.00 0.00 0.00 4.61
695 893 2.169978 GTTACTCCCCACTATGACCACC 59.830 54.545 0.00 0.00 0.00 4.61
696 894 3.105283 AGTTACTCCCCACTATGACCAC 58.895 50.000 0.00 0.00 0.00 4.16
697 895 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
698 896 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
699 897 5.068855 GGTCTAAGTTACTCCCCACTATGAC 59.931 48.000 0.00 0.00 0.00 3.06
700 898 5.206587 GGTCTAAGTTACTCCCCACTATGA 58.793 45.833 0.00 0.00 0.00 2.15
701 899 4.960469 TGGTCTAAGTTACTCCCCACTATG 59.040 45.833 0.00 0.00 0.00 2.23
702 900 5.216665 TGGTCTAAGTTACTCCCCACTAT 57.783 43.478 0.00 0.00 0.00 2.12
703 901 4.680278 TGGTCTAAGTTACTCCCCACTA 57.320 45.455 0.00 0.00 0.00 2.74
704 902 3.555117 TGGTCTAAGTTACTCCCCACT 57.445 47.619 0.00 0.00 0.00 4.00
705 903 3.134262 GGATGGTCTAAGTTACTCCCCAC 59.866 52.174 0.00 0.00 0.00 4.61
709 907 4.583489 TCGATGGATGGTCTAAGTTACTCC 59.417 45.833 0.00 0.00 0.00 3.85
712 910 5.769484 TCTCGATGGATGGTCTAAGTTAC 57.231 43.478 0.00 0.00 0.00 2.50
735 933 4.066646 TGTGCATGCAACGTACCTATAT 57.933 40.909 24.58 0.00 0.00 0.86
736 934 3.528597 TGTGCATGCAACGTACCTATA 57.471 42.857 24.58 0.00 0.00 1.31
773 971 0.871722 TTCCGAGACGTTTTGCATGG 59.128 50.000 0.00 0.00 0.00 3.66
791 989 3.626924 AAGGACACGCGCTCCCTT 61.627 61.111 17.60 17.45 34.41 3.95
835 1035 2.504899 CGTCGCTCATCACGTGCT 60.505 61.111 11.67 0.00 31.76 4.40
1515 4463 1.115467 ACTCTGGCTATTCTCCGGTG 58.885 55.000 0.00 0.00 0.00 4.94
1552 4500 4.474113 CATTCTCCGGTTAGTATCGCTAC 58.526 47.826 0.00 0.00 0.00 3.58
1553 4501 3.504906 CCATTCTCCGGTTAGTATCGCTA 59.495 47.826 0.00 0.00 0.00 4.26
1559 4507 2.170012 AGGCCATTCTCCGGTTAGTA 57.830 50.000 5.01 0.00 0.00 1.82
1563 4511 2.009681 AAAAAGGCCATTCTCCGGTT 57.990 45.000 5.01 0.00 0.00 4.44
1602 4576 1.881252 GTACACGCACTATGGCCGG 60.881 63.158 0.00 0.00 0.00 6.13
1625 5053 3.696051 AGCACACTTGACTTCACAAACAT 59.304 39.130 0.00 0.00 0.00 2.71
1627 5055 3.764885 AGCACACTTGACTTCACAAAC 57.235 42.857 0.00 0.00 0.00 2.93
1639 5067 3.696051 CAGCCACCAATATAAGCACACTT 59.304 43.478 0.00 0.00 40.07 3.16
1649 5077 1.832883 TGAAACGCAGCCACCAATAT 58.167 45.000 0.00 0.00 0.00 1.28
1655 5083 0.447801 CCACTATGAAACGCAGCCAC 59.552 55.000 0.00 0.00 0.00 5.01
1661 5089 2.901249 TCTAAGCCCACTATGAAACGC 58.099 47.619 0.00 0.00 0.00 4.84
1686 5115 6.255670 GCGAAGGTTTTTCTTCTTGTGAAAAT 59.744 34.615 0.00 0.00 41.25 1.82
1699 5128 5.064071 TGGTCAAAATTTGCGAAGGTTTTTC 59.936 36.000 0.00 0.00 0.00 2.29
1704 5134 3.810310 TTGGTCAAAATTTGCGAAGGT 57.190 38.095 0.00 0.00 0.00 3.50
1790 5220 9.744468 GGAGCCGTTTGTCATATTTTATTTATT 57.256 29.630 0.00 0.00 0.00 1.40
1791 5221 8.073768 CGGAGCCGTTTGTCATATTTTATTTAT 58.926 33.333 0.00 0.00 34.35 1.40
1792 5222 7.411274 CGGAGCCGTTTGTCATATTTTATTTA 58.589 34.615 0.00 0.00 34.35 1.40
1793 5223 6.262601 CGGAGCCGTTTGTCATATTTTATTT 58.737 36.000 0.00 0.00 34.35 1.40
1794 5224 5.816919 CGGAGCCGTTTGTCATATTTTATT 58.183 37.500 0.00 0.00 34.35 1.40
1795 5225 5.418310 CGGAGCCGTTTGTCATATTTTAT 57.582 39.130 0.00 0.00 34.35 1.40
1796 5226 4.868450 CGGAGCCGTTTGTCATATTTTA 57.132 40.909 0.00 0.00 34.35 1.52
1797 5227 3.757745 CGGAGCCGTTTGTCATATTTT 57.242 42.857 0.00 0.00 34.35 1.82
1820 5250 5.700691 CCATGAGGATGGTCGAGACATCG 62.701 56.522 18.52 8.52 44.36 3.84
1821 5251 2.288702 CCATGAGGATGGTCGAGACATC 60.289 54.545 17.49 17.49 43.98 3.06
1822 5252 1.690893 CCATGAGGATGGTCGAGACAT 59.309 52.381 5.55 2.39 43.98 3.06
1823 5253 1.114627 CCATGAGGATGGTCGAGACA 58.885 55.000 5.55 0.00 43.98 3.41
1824 5254 3.976339 CCATGAGGATGGTCGAGAC 57.024 57.895 0.00 0.00 43.98 3.36
1853 5283 1.829970 GGCTTAATGGAGGCCAGGC 60.830 63.158 5.01 1.26 44.69 4.85
1854 5284 4.587056 GGCTTAATGGAGGCCAGG 57.413 61.111 5.01 0.00 44.69 4.45
1858 5288 2.907407 GCCGGGCTTAATGGAGGC 60.907 66.667 12.87 0.00 41.16 4.70
1859 5289 2.203351 GGCCGGGCTTAATGGAGG 60.203 66.667 22.87 0.00 0.00 4.30
1860 5290 2.203351 GGGCCGGGCTTAATGGAG 60.203 66.667 28.80 0.00 0.00 3.86
1861 5291 4.183858 CGGGCCGGGCTTAATGGA 62.184 66.667 28.80 0.00 0.00 3.41
1874 5304 2.991540 AGCTTTTTGGCTCCGGGC 60.992 61.111 0.00 3.56 38.24 6.13
1880 5310 4.938838 AGGCAGAGCTTTTTGGCT 57.061 50.000 14.41 14.41 46.11 4.75
1881 5311 0.675633 TTCAGGCAGAGCTTTTTGGC 59.324 50.000 10.96 10.96 39.90 4.52
1882 5312 3.006110 TGATTTCAGGCAGAGCTTTTTGG 59.994 43.478 0.00 0.00 0.00 3.28
1883 5313 4.247267 TGATTTCAGGCAGAGCTTTTTG 57.753 40.909 0.00 0.00 0.00 2.44
1884 5314 4.322499 CCATGATTTCAGGCAGAGCTTTTT 60.322 41.667 0.00 0.00 0.00 1.94
1885 5315 3.194968 CCATGATTTCAGGCAGAGCTTTT 59.805 43.478 0.00 0.00 0.00 2.27
1886 5316 2.758979 CCATGATTTCAGGCAGAGCTTT 59.241 45.455 0.00 0.00 0.00 3.51
1887 5317 2.025605 TCCATGATTTCAGGCAGAGCTT 60.026 45.455 0.00 0.00 0.00 3.74
1888 5318 1.562942 TCCATGATTTCAGGCAGAGCT 59.437 47.619 0.00 0.00 0.00 4.09
1889 5319 2.048444 TCCATGATTTCAGGCAGAGC 57.952 50.000 0.00 0.00 0.00 4.09
1890 5320 4.703575 TCTTTTCCATGATTTCAGGCAGAG 59.296 41.667 0.00 0.00 0.00 3.35
1891 5321 4.665451 TCTTTTCCATGATTTCAGGCAGA 58.335 39.130 0.00 0.00 0.00 4.26
1892 5322 4.703575 TCTCTTTTCCATGATTTCAGGCAG 59.296 41.667 0.00 0.00 0.00 4.85
1893 5323 4.665451 TCTCTTTTCCATGATTTCAGGCA 58.335 39.130 0.00 0.00 0.00 4.75
1894 5324 5.648572 CTTCTCTTTTCCATGATTTCAGGC 58.351 41.667 0.00 0.00 0.00 4.85
1895 5325 5.418209 AGCTTCTCTTTTCCATGATTTCAGG 59.582 40.000 0.00 0.00 0.00 3.86
1896 5326 6.512342 AGCTTCTCTTTTCCATGATTTCAG 57.488 37.500 0.00 0.00 0.00 3.02
1897 5327 6.491062 TCAAGCTTCTCTTTTCCATGATTTCA 59.509 34.615 0.00 0.00 31.27 2.69
1898 5328 6.917533 TCAAGCTTCTCTTTTCCATGATTTC 58.082 36.000 0.00 0.00 31.27 2.17
1899 5329 6.571925 GCTCAAGCTTCTCTTTTCCATGATTT 60.572 38.462 0.00 0.00 38.21 2.17
1900 5330 5.105837 GCTCAAGCTTCTCTTTTCCATGATT 60.106 40.000 0.00 0.00 38.21 2.57
1901 5331 4.398673 GCTCAAGCTTCTCTTTTCCATGAT 59.601 41.667 0.00 0.00 38.21 2.45
1902 5332 3.755378 GCTCAAGCTTCTCTTTTCCATGA 59.245 43.478 0.00 0.00 38.21 3.07
1903 5333 3.119566 GGCTCAAGCTTCTCTTTTCCATG 60.120 47.826 0.00 0.00 41.70 3.66
1904 5334 3.087781 GGCTCAAGCTTCTCTTTTCCAT 58.912 45.455 0.00 0.00 41.70 3.41
1905 5335 2.107204 AGGCTCAAGCTTCTCTTTTCCA 59.893 45.455 0.00 0.00 41.70 3.53
1906 5336 2.487372 CAGGCTCAAGCTTCTCTTTTCC 59.513 50.000 0.00 0.00 41.70 3.13
1907 5337 3.188254 GTCAGGCTCAAGCTTCTCTTTTC 59.812 47.826 0.00 0.00 41.70 2.29
1908 5338 3.145286 GTCAGGCTCAAGCTTCTCTTTT 58.855 45.455 0.00 0.00 41.70 2.27
1909 5339 2.551938 GGTCAGGCTCAAGCTTCTCTTT 60.552 50.000 0.00 0.00 41.70 2.52
1910 5340 1.003003 GGTCAGGCTCAAGCTTCTCTT 59.997 52.381 0.00 0.00 41.70 2.85
1911 5341 0.612744 GGTCAGGCTCAAGCTTCTCT 59.387 55.000 0.00 0.00 41.70 3.10
1912 5342 0.739112 CGGTCAGGCTCAAGCTTCTC 60.739 60.000 0.00 0.00 41.70 2.87
1913 5343 1.294780 CGGTCAGGCTCAAGCTTCT 59.705 57.895 0.00 0.00 41.70 2.85
1914 5344 1.743252 CCGGTCAGGCTCAAGCTTC 60.743 63.158 0.00 0.00 41.70 3.86
1915 5345 1.768684 TTCCGGTCAGGCTCAAGCTT 61.769 55.000 0.00 0.00 41.70 3.74
1916 5346 2.217038 TTCCGGTCAGGCTCAAGCT 61.217 57.895 0.00 0.00 41.70 3.74
1917 5347 2.035442 GTTCCGGTCAGGCTCAAGC 61.035 63.158 0.00 0.00 40.77 4.01
1918 5348 0.035458 AAGTTCCGGTCAGGCTCAAG 59.965 55.000 0.00 0.00 40.77 3.02
1919 5349 0.034896 GAAGTTCCGGTCAGGCTCAA 59.965 55.000 0.00 0.00 40.77 3.02
1920 5350 1.671742 GAAGTTCCGGTCAGGCTCA 59.328 57.895 0.00 0.00 40.77 4.26
1921 5351 1.079057 GGAAGTTCCGGTCAGGCTC 60.079 63.158 6.06 0.00 40.77 4.70
1922 5352 1.128188 AAGGAAGTTCCGGTCAGGCT 61.128 55.000 16.31 0.00 42.75 4.58
1923 5353 0.955919 CAAGGAAGTTCCGGTCAGGC 60.956 60.000 16.31 0.00 42.75 4.85
1924 5354 0.955919 GCAAGGAAGTTCCGGTCAGG 60.956 60.000 16.31 4.97 42.75 3.86
1925 5355 0.250295 TGCAAGGAAGTTCCGGTCAG 60.250 55.000 16.31 6.95 42.75 3.51
1926 5356 0.250295 CTGCAAGGAAGTTCCGGTCA 60.250 55.000 16.31 13.13 42.75 4.02
1927 5357 2.544726 CTGCAAGGAAGTTCCGGTC 58.455 57.895 16.31 9.40 42.75 4.79
1928 5358 4.800554 CTGCAAGGAAGTTCCGGT 57.199 55.556 16.31 5.81 42.75 5.28
1939 5369 1.131883 CTTCGCTTTCCATCCTGCAAG 59.868 52.381 0.00 0.00 0.00 4.01
1940 5370 1.167851 CTTCGCTTTCCATCCTGCAA 58.832 50.000 0.00 0.00 0.00 4.08
1941 5371 0.036732 ACTTCGCTTTCCATCCTGCA 59.963 50.000 0.00 0.00 0.00 4.41
1942 5372 0.449388 CACTTCGCTTTCCATCCTGC 59.551 55.000 0.00 0.00 0.00 4.85
1943 5373 0.449388 GCACTTCGCTTTCCATCCTG 59.551 55.000 0.00 0.00 37.77 3.86
1944 5374 0.036732 TGCACTTCGCTTTCCATCCT 59.963 50.000 0.00 0.00 43.06 3.24
1945 5375 0.881118 TTGCACTTCGCTTTCCATCC 59.119 50.000 0.00 0.00 43.06 3.51
1946 5376 1.730446 GCTTGCACTTCGCTTTCCATC 60.730 52.381 0.00 0.00 43.06 3.51
1947 5377 0.242017 GCTTGCACTTCGCTTTCCAT 59.758 50.000 0.00 0.00 43.06 3.41
1948 5378 1.654220 GCTTGCACTTCGCTTTCCA 59.346 52.632 0.00 0.00 43.06 3.53
1949 5379 1.081175 GGCTTGCACTTCGCTTTCC 60.081 57.895 0.00 0.00 43.06 3.13
1950 5380 1.081175 GGGCTTGCACTTCGCTTTC 60.081 57.895 0.00 0.00 43.06 2.62
1951 5381 2.908073 CGGGCTTGCACTTCGCTTT 61.908 57.895 0.00 0.00 43.06 3.51
1952 5382 3.357079 CGGGCTTGCACTTCGCTT 61.357 61.111 0.00 0.00 43.06 4.68
1953 5383 4.626081 ACGGGCTTGCACTTCGCT 62.626 61.111 0.00 0.00 43.06 4.93
1954 5384 4.090057 GACGGGCTTGCACTTCGC 62.090 66.667 0.00 0.00 42.89 4.70
1955 5385 3.423154 GGACGGGCTTGCACTTCG 61.423 66.667 0.00 0.00 0.00 3.79
1956 5386 2.032681 AGGACGGGCTTGCACTTC 59.967 61.111 0.00 0.00 0.00 3.01
1957 5387 2.281761 CAGGACGGGCTTGCACTT 60.282 61.111 0.00 0.00 0.00 3.16
1958 5388 4.335647 CCAGGACGGGCTTGCACT 62.336 66.667 0.00 0.00 0.00 4.40
1966 5396 2.499303 AAAATCCAGGCCAGGACGGG 62.499 60.000 20.78 4.73 41.30 5.28
1967 5397 0.611896 AAAAATCCAGGCCAGGACGG 60.612 55.000 20.78 3.79 41.30 4.79
1968 5398 0.527565 CAAAAATCCAGGCCAGGACG 59.472 55.000 20.78 2.05 41.30 4.79
1969 5399 0.897621 CCAAAAATCCAGGCCAGGAC 59.102 55.000 20.78 0.00 41.30 3.85
1970 5400 0.252193 CCCAAAAATCCAGGCCAGGA 60.252 55.000 20.62 20.62 43.01 3.86
1971 5401 1.902765 GCCCAAAAATCCAGGCCAGG 61.903 60.000 8.15 8.15 39.60 4.45
1972 5402 1.598517 GCCCAAAAATCCAGGCCAG 59.401 57.895 5.01 0.00 39.60 4.85
1973 5403 3.804490 GCCCAAAAATCCAGGCCA 58.196 55.556 5.01 0.00 39.60 5.36
1975 5405 2.578664 CGGCCCAAAAATCCAGGC 59.421 61.111 0.00 0.00 44.99 4.85
1976 5406 2.358372 CCCGGCCCAAAAATCCAGG 61.358 63.158 0.00 0.00 0.00 4.45
1977 5407 3.017771 GCCCGGCCCAAAAATCCAG 62.018 63.158 0.00 0.00 0.00 3.86
1978 5408 3.000233 GCCCGGCCCAAAAATCCA 61.000 61.111 0.00 0.00 0.00 3.41
1979 5409 2.683572 AGCCCGGCCCAAAAATCC 60.684 61.111 5.55 0.00 0.00 3.01
1980 5410 1.948721 CTGAGCCCGGCCCAAAAATC 61.949 60.000 5.55 0.00 0.00 2.17
1981 5411 1.984026 CTGAGCCCGGCCCAAAAAT 60.984 57.895 5.55 0.00 0.00 1.82
1982 5412 2.600173 CTGAGCCCGGCCCAAAAA 60.600 61.111 5.55 0.00 0.00 1.94
1983 5413 4.676951 CCTGAGCCCGGCCCAAAA 62.677 66.667 5.55 0.00 0.00 2.44
1991 5421 3.790437 ATGGACAGCCTGAGCCCG 61.790 66.667 0.00 0.00 41.25 6.13
1992 5422 2.124403 CATGGACAGCCTGAGCCC 60.124 66.667 0.00 0.00 41.25 5.19
1993 5423 2.827642 GCATGGACAGCCTGAGCC 60.828 66.667 0.00 0.00 41.25 4.70
2000 5430 0.323360 TAAACCTGGGCATGGACAGC 60.323 55.000 0.00 0.00 33.43 4.40
2001 5431 1.004745 AGTAAACCTGGGCATGGACAG 59.995 52.381 0.00 0.00 34.54 3.51
2002 5432 1.072266 AGTAAACCTGGGCATGGACA 58.928 50.000 0.00 0.00 0.00 4.02
2003 5433 3.118038 TGATAGTAAACCTGGGCATGGAC 60.118 47.826 0.00 0.00 0.00 4.02
2004 5434 3.119319 TGATAGTAAACCTGGGCATGGA 58.881 45.455 0.00 0.00 0.00 3.41
2005 5435 3.576078 TGATAGTAAACCTGGGCATGG 57.424 47.619 0.00 0.00 0.00 3.66
2006 5436 4.214119 CGAATGATAGTAAACCTGGGCATG 59.786 45.833 0.00 0.00 0.00 4.06
2007 5437 4.141482 ACGAATGATAGTAAACCTGGGCAT 60.141 41.667 0.00 0.00 0.00 4.40
2008 5438 3.199071 ACGAATGATAGTAAACCTGGGCA 59.801 43.478 0.00 0.00 0.00 5.36
2009 5439 3.560068 CACGAATGATAGTAAACCTGGGC 59.440 47.826 0.00 0.00 0.00 5.36
2010 5440 4.809426 GTCACGAATGATAGTAAACCTGGG 59.191 45.833 0.00 0.00 37.14 4.45
2011 5441 4.503007 CGTCACGAATGATAGTAAACCTGG 59.497 45.833 0.00 0.00 37.14 4.45
2012 5442 5.004440 CACGTCACGAATGATAGTAAACCTG 59.996 44.000 2.91 0.00 37.14 4.00
2013 5443 5.100259 CACGTCACGAATGATAGTAAACCT 58.900 41.667 2.91 0.00 37.14 3.50
2014 5444 4.259690 GCACGTCACGAATGATAGTAAACC 60.260 45.833 2.91 0.00 37.14 3.27
2015 5445 4.561606 AGCACGTCACGAATGATAGTAAAC 59.438 41.667 2.91 0.00 37.14 2.01
2016 5446 4.740268 AGCACGTCACGAATGATAGTAAA 58.260 39.130 2.91 0.00 37.14 2.01
2017 5447 4.142556 TGAGCACGTCACGAATGATAGTAA 60.143 41.667 2.91 0.00 37.14 2.24
2018 5448 3.375922 TGAGCACGTCACGAATGATAGTA 59.624 43.478 2.91 0.00 37.14 1.82
2019 5449 2.163613 TGAGCACGTCACGAATGATAGT 59.836 45.455 2.91 0.00 37.14 2.12
2020 5450 2.786027 CTGAGCACGTCACGAATGATAG 59.214 50.000 2.91 0.00 37.14 2.08
2021 5451 2.797491 CTGAGCACGTCACGAATGATA 58.203 47.619 2.91 0.00 37.14 2.15
2022 5452 1.633561 CTGAGCACGTCACGAATGAT 58.366 50.000 2.91 0.00 37.14 2.45
2023 5453 1.008875 GCTGAGCACGTCACGAATGA 61.009 55.000 2.91 0.00 0.00 2.57
2024 5454 1.284297 TGCTGAGCACGTCACGAATG 61.284 55.000 2.91 0.00 31.71 2.67
2025 5455 0.599991 TTGCTGAGCACGTCACGAAT 60.600 50.000 6.64 0.00 38.71 3.34
2026 5456 0.599991 ATTGCTGAGCACGTCACGAA 60.600 50.000 6.64 0.00 38.71 3.85
2027 5457 1.006220 ATTGCTGAGCACGTCACGA 60.006 52.632 6.64 0.00 38.71 4.35
2028 5458 1.417592 GATTGCTGAGCACGTCACG 59.582 57.895 6.64 0.00 38.71 4.35
2029 5459 1.790387 GGATTGCTGAGCACGTCAC 59.210 57.895 6.64 0.00 38.71 3.67
2030 5460 1.737735 CGGATTGCTGAGCACGTCA 60.738 57.895 6.64 0.00 38.71 4.35
2031 5461 3.084579 CGGATTGCTGAGCACGTC 58.915 61.111 6.64 8.63 38.71 4.34
2032 5462 3.121030 GCGGATTGCTGAGCACGT 61.121 61.111 6.64 0.00 38.71 4.49
2033 5463 3.869272 GGCGGATTGCTGAGCACG 61.869 66.667 6.64 9.33 45.43 5.34
2076 5506 4.770874 CACCGGGTGCCCTAACCG 62.771 72.222 15.29 0.00 46.79 4.44
2077 5507 4.419921 CCACCGGGTGCCCTAACC 62.420 72.222 21.88 0.00 39.71 2.85
2078 5508 4.419921 CCCACCGGGTGCCCTAAC 62.420 72.222 21.88 0.00 38.25 2.34
2095 5525 4.162690 AGATTCCGTGCCGAGCCC 62.163 66.667 0.00 0.00 0.00 5.19
2096 5526 1.735376 TAGAGATTCCGTGCCGAGCC 61.735 60.000 0.00 0.00 0.00 4.70
2097 5527 0.595310 GTAGAGATTCCGTGCCGAGC 60.595 60.000 0.00 0.00 0.00 5.03
2098 5528 1.002251 GAGTAGAGATTCCGTGCCGAG 60.002 57.143 0.00 0.00 0.00 4.63
2099 5529 1.022735 GAGTAGAGATTCCGTGCCGA 58.977 55.000 0.00 0.00 0.00 5.54
2100 5530 0.030908 GGAGTAGAGATTCCGTGCCG 59.969 60.000 0.00 0.00 0.00 5.69
2101 5531 1.404843 AGGAGTAGAGATTCCGTGCC 58.595 55.000 0.00 0.00 36.57 5.01
2102 5532 4.551388 CATTAGGAGTAGAGATTCCGTGC 58.449 47.826 0.00 0.00 36.57 5.34
2103 5533 4.827835 TCCATTAGGAGTAGAGATTCCGTG 59.172 45.833 0.00 0.00 39.61 4.94
2104 5534 5.063017 TCCATTAGGAGTAGAGATTCCGT 57.937 43.478 0.00 0.00 39.61 4.69
2134 5564 5.751243 AATAAACCATGCGGACTATTCAC 57.249 39.130 0.00 0.00 35.59 3.18
2147 5577 8.840833 AAAATAAACCAGCGAAAATAAACCAT 57.159 26.923 0.00 0.00 0.00 3.55
2148 5578 7.115095 CGAAAATAAACCAGCGAAAATAAACCA 59.885 33.333 0.00 0.00 0.00 3.67
2255 7485 2.782222 GGCGTAGACCGATCTGCCA 61.782 63.158 3.23 0.00 41.61 4.92
2256 7486 2.027751 GGCGTAGACCGATCTGCC 59.972 66.667 0.00 0.00 36.99 4.85
2265 7495 4.849329 CTGGTCGGCGGCGTAGAC 62.849 72.222 31.06 21.23 0.00 2.59
2344 7596 3.864686 CAGCGGCGATCCAAACGG 61.865 66.667 12.98 0.00 0.00 4.44
2345 7597 4.520846 GCAGCGGCGATCCAAACG 62.521 66.667 12.98 0.00 0.00 3.60
2346 7598 4.179579 GGCAGCGGCGATCCAAAC 62.180 66.667 12.98 0.00 42.47 2.93
2373 7625 2.658707 GCGGCGTCTTCTGTGTGAC 61.659 63.158 9.37 0.00 0.00 3.67
2374 7626 2.355837 GCGGCGTCTTCTGTGTGA 60.356 61.111 9.37 0.00 0.00 3.58
2375 7627 3.414700 GGCGGCGTCTTCTGTGTG 61.415 66.667 9.37 0.00 0.00 3.82
2395 7647 2.649975 CCGTACGTGGACGCGATC 60.650 66.667 15.93 6.63 44.43 3.69
2396 7648 4.183686 CCCGTACGTGGACGCGAT 62.184 66.667 15.93 0.00 44.43 4.58
2402 7654 3.376078 GGCAGTCCCGTACGTGGA 61.376 66.667 18.02 18.02 0.00 4.02
2435 9346 2.430921 GAGACACGTGTCCCTGCG 60.431 66.667 38.00 4.29 45.85 5.18
2436 9347 2.048127 GGAGACACGTGTCCCTGC 60.048 66.667 38.00 25.29 45.85 4.85
2448 9359 1.616374 GAAGAGGGGATCGATGGAGAC 59.384 57.143 0.54 0.00 0.00 3.36
2449 9360 1.819697 CGAAGAGGGGATCGATGGAGA 60.820 57.143 0.54 0.00 41.43 3.71
2450 9361 0.600557 CGAAGAGGGGATCGATGGAG 59.399 60.000 0.54 0.00 41.43 3.86
2451 9362 0.827925 CCGAAGAGGGGATCGATGGA 60.828 60.000 0.54 0.00 41.43 3.41
2452 9363 0.827925 TCCGAAGAGGGGATCGATGG 60.828 60.000 0.54 0.00 41.43 3.51
2454 9365 3.776196 ATCCGAAGAGGGGATCGAT 57.224 52.632 0.00 0.00 40.22 3.59
2458 9369 2.210711 GGCGATCCGAAGAGGGGAT 61.211 63.158 0.00 0.00 46.82 3.85
2459 9370 2.838225 GGCGATCCGAAGAGGGGA 60.838 66.667 0.00 0.00 41.52 4.81
2460 9371 2.840102 AGGCGATCCGAAGAGGGG 60.840 66.667 0.00 0.00 41.52 4.79
2462 9373 2.731374 GGAGGCGATCCGAAGAGG 59.269 66.667 0.00 0.00 38.67 3.69
2474 9385 4.083862 AGAAACGGCGGAGGAGGC 62.084 66.667 13.24 0.00 0.00 4.70
2475 9386 2.184579 GAGAAACGGCGGAGGAGG 59.815 66.667 13.24 0.00 0.00 4.30
2476 9387 2.184579 GGAGAAACGGCGGAGGAG 59.815 66.667 13.24 0.00 0.00 3.69
2477 9388 2.602267 TGGAGAAACGGCGGAGGA 60.602 61.111 13.24 0.00 0.00 3.71
2478 9389 1.961180 ATCTGGAGAAACGGCGGAGG 61.961 60.000 13.24 0.00 0.00 4.30
2479 9390 0.528684 GATCTGGAGAAACGGCGGAG 60.529 60.000 13.24 0.00 0.00 4.63
2480 9391 1.515954 GATCTGGAGAAACGGCGGA 59.484 57.895 13.24 0.00 0.00 5.54
2481 9392 1.878522 CGATCTGGAGAAACGGCGG 60.879 63.158 13.24 0.00 0.00 6.13
2482 9393 2.517450 GCGATCTGGAGAAACGGCG 61.517 63.158 4.80 4.80 0.00 6.46
2483 9394 2.174319 GGCGATCTGGAGAAACGGC 61.174 63.158 13.83 13.83 42.08 5.68
2484 9395 0.179073 ATGGCGATCTGGAGAAACGG 60.179 55.000 0.00 0.00 0.00 4.44
2485 9396 1.202463 AGATGGCGATCTGGAGAAACG 60.202 52.381 10.78 0.00 37.56 3.60
2486 9397 2.478831 GAGATGGCGATCTGGAGAAAC 58.521 52.381 16.66 0.00 39.19 2.78
2487 9398 2.898729 GAGATGGCGATCTGGAGAAA 57.101 50.000 16.66 0.00 39.19 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.