Multiple sequence alignment - TraesCS7A01G020500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G020500 chr7A 100.000 4496 0 0 1 4496 8377392 8372897 0.000000e+00 8303.0
1 TraesCS7A01G020500 chr7A 99.180 122 0 1 33 154 8377239 8377119 7.570000e-53 219.0
2 TraesCS7A01G020500 chr7A 99.180 122 0 1 154 274 8377360 8377239 7.570000e-53 219.0
3 TraesCS7A01G020500 chr7D 87.722 2305 174 57 2261 4496 7447892 7445628 0.000000e+00 2588.0
4 TraesCS7A01G020500 chr7D 91.695 1758 78 23 526 2244 7449924 7448196 0.000000e+00 2375.0
5 TraesCS7A01G020500 chr7D 89.055 402 19 7 154 532 7450364 7449965 4.070000e-130 475.0
6 TraesCS7A01G020500 chr7D 94.737 152 7 1 1 152 7450396 7450246 7.520000e-58 235.0
7 TraesCS7A01G020500 chr4A 86.028 2326 179 80 2259 4496 732773163 732770896 0.000000e+00 2361.0
8 TraesCS7A01G020500 chr4A 84.381 1082 103 42 924 1968 732774321 732773269 0.000000e+00 1002.0
9 TraesCS7A01G020500 chr4A 80.978 184 32 3 2347 2528 718873574 718873392 4.690000e-30 143.0
10 TraesCS7A01G020500 chr4A 77.686 121 14 8 4007 4126 664240941 664241049 1.350000e-05 62.1
11 TraesCS7A01G020500 chr4A 100.000 32 0 0 678 709 732774595 732774564 4.860000e-05 60.2
12 TraesCS7A01G020500 chr2B 88.759 1112 88 19 1974 3070 759372033 759370944 0.000000e+00 1327.0
13 TraesCS7A01G020500 chr2D 82.883 333 50 7 1932 2262 648984461 648984788 4.400000e-75 292.0
14 TraesCS7A01G020500 chr4B 82.883 222 21 11 1539 1745 650181813 650181594 2.760000e-42 183.0
15 TraesCS7A01G020500 chr4B 82.063 223 21 11 1539 1745 650061364 650061145 5.980000e-39 172.0
16 TraesCS7A01G020500 chr4B 82.063 223 21 11 1539 1745 650120151 650119932 5.980000e-39 172.0
17 TraesCS7A01G020500 chr4B 83.770 191 18 8 1539 1719 650051755 650051568 7.730000e-38 169.0
18 TraesCS7A01G020500 chr6B 92.941 85 6 0 1544 1628 9002356 9002440 1.700000e-24 124.0
19 TraesCS7A01G020500 chr6A 93.902 82 5 0 1547 1628 3852750 3852669 1.700000e-24 124.0
20 TraesCS7A01G020500 chr6D 91.463 82 7 0 1547 1628 4775167 4775086 3.680000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G020500 chr7A 8372897 8377392 4495 True 2913.666667 8303 99.453333 1 4496 3 chr7A.!!$R1 4495
1 TraesCS7A01G020500 chr7D 7445628 7450396 4768 True 1418.250000 2588 90.802250 1 4496 4 chr7D.!!$R1 4495
2 TraesCS7A01G020500 chr4A 732770896 732774595 3699 True 1141.066667 2361 90.136333 678 4496 3 chr4A.!!$R2 3818
3 TraesCS7A01G020500 chr2B 759370944 759372033 1089 True 1327.000000 1327 88.759000 1974 3070 1 chr2B.!!$R1 1096

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
767 841 0.106217 AGTTTTGGTGGGTGGGTGAG 60.106 55.0 0.00 0.00 0.00 3.51 F
1869 2025 0.040058 TCTGTTGCATTGCATCCCCT 59.960 50.0 12.95 0.00 38.76 4.79 F
1870 2026 0.174845 CTGTTGCATTGCATCCCCTG 59.825 55.0 12.95 2.05 38.76 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2059 2217 0.390472 GAACCGACTCTGAAGCCTGG 60.390 60.0 0.00 0.00 0.00 4.45 R
3419 3926 0.242286 CCAGTCGATCCCTAGCATCG 59.758 60.0 13.51 13.51 43.77 3.84 R
3806 4318 1.584175 TGTCGCCACGTTTTGTATGT 58.416 45.0 0.00 0.00 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.705290 AACTGGGTTTTCATCATAATTTTGTAC 57.295 29.630 0.00 0.00 0.00 2.90
33 34 8.311109 ACTGGGTTTTCATCATAATTTTGTACC 58.689 33.333 0.00 0.00 0.00 3.34
34 35 7.616313 TGGGTTTTCATCATAATTTTGTACCC 58.384 34.615 0.00 0.00 40.52 3.69
35 36 7.456269 TGGGTTTTCATCATAATTTTGTACCCT 59.544 33.333 0.00 0.00 40.70 4.34
36 37 8.318412 GGGTTTTCATCATAATTTTGTACCCTT 58.682 33.333 0.00 0.00 37.82 3.95
37 38 9.719355 GGTTTTCATCATAATTTTGTACCCTTT 57.281 29.630 0.00 0.00 0.00 3.11
51 52 9.819267 TTTTGTACCCTTTTGTTTTATTAGTGG 57.181 29.630 0.00 0.00 0.00 4.00
52 53 8.536340 TTGTACCCTTTTGTTTTATTAGTGGT 57.464 30.769 0.00 0.00 0.00 4.16
53 54 8.536340 TGTACCCTTTTGTTTTATTAGTGGTT 57.464 30.769 0.00 0.00 0.00 3.67
54 55 8.979534 TGTACCCTTTTGTTTTATTAGTGGTTT 58.020 29.630 0.00 0.00 0.00 3.27
55 56 9.820725 GTACCCTTTTGTTTTATTAGTGGTTTT 57.179 29.630 0.00 0.00 0.00 2.43
56 57 8.725405 ACCCTTTTGTTTTATTAGTGGTTTTG 57.275 30.769 0.00 0.00 0.00 2.44
57 58 7.281324 ACCCTTTTGTTTTATTAGTGGTTTTGC 59.719 33.333 0.00 0.00 0.00 3.68
58 59 7.254966 CCCTTTTGTTTTATTAGTGGTTTTGCC 60.255 37.037 0.00 0.00 37.90 4.52
59 60 6.830114 TTTGTTTTATTAGTGGTTTTGCCG 57.170 33.333 0.00 0.00 41.21 5.69
60 61 5.517322 TGTTTTATTAGTGGTTTTGCCGT 57.483 34.783 0.00 0.00 41.21 5.68
61 62 5.282510 TGTTTTATTAGTGGTTTTGCCGTG 58.717 37.500 0.00 0.00 41.21 4.94
62 63 5.067413 TGTTTTATTAGTGGTTTTGCCGTGA 59.933 36.000 0.00 0.00 41.21 4.35
63 64 4.752661 TTATTAGTGGTTTTGCCGTGAC 57.247 40.909 0.00 0.00 41.21 3.67
64 65 1.310904 TTAGTGGTTTTGCCGTGACC 58.689 50.000 0.00 0.00 41.21 4.02
65 66 0.470766 TAGTGGTTTTGCCGTGACCT 59.529 50.000 0.00 0.00 41.21 3.85
66 67 0.395173 AGTGGTTTTGCCGTGACCTT 60.395 50.000 0.00 0.00 41.21 3.50
67 68 0.458260 GTGGTTTTGCCGTGACCTTT 59.542 50.000 0.00 0.00 41.21 3.11
68 69 1.134936 GTGGTTTTGCCGTGACCTTTT 60.135 47.619 0.00 0.00 41.21 2.27
69 70 1.134965 TGGTTTTGCCGTGACCTTTTG 60.135 47.619 0.00 0.00 41.21 2.44
70 71 4.362206 TGGTTTTGCCGTGACCTTTTGG 62.362 50.000 0.00 0.00 42.85 3.28
85 86 4.420168 CCTTTTGGTGTTATACAATGGCG 58.580 43.478 0.00 0.00 34.07 5.69
86 87 4.156922 CCTTTTGGTGTTATACAATGGCGA 59.843 41.667 0.00 0.00 34.07 5.54
87 88 4.955925 TTTGGTGTTATACAATGGCGAG 57.044 40.909 0.00 0.00 0.00 5.03
88 89 3.897141 TGGTGTTATACAATGGCGAGA 57.103 42.857 0.00 0.00 0.00 4.04
89 90 4.209307 TGGTGTTATACAATGGCGAGAA 57.791 40.909 0.00 0.00 0.00 2.87
90 91 3.936453 TGGTGTTATACAATGGCGAGAAC 59.064 43.478 0.00 0.00 0.00 3.01
91 92 4.189231 GGTGTTATACAATGGCGAGAACT 58.811 43.478 0.00 0.00 0.00 3.01
92 93 5.105269 TGGTGTTATACAATGGCGAGAACTA 60.105 40.000 0.00 0.00 0.00 2.24
93 94 5.813672 GGTGTTATACAATGGCGAGAACTAA 59.186 40.000 0.00 0.00 0.00 2.24
94 95 6.314400 GGTGTTATACAATGGCGAGAACTAAA 59.686 38.462 0.00 0.00 0.00 1.85
95 96 7.399523 GTGTTATACAATGGCGAGAACTAAAG 58.600 38.462 0.00 0.00 0.00 1.85
96 97 7.277098 GTGTTATACAATGGCGAGAACTAAAGA 59.723 37.037 0.00 0.00 0.00 2.52
97 98 7.277098 TGTTATACAATGGCGAGAACTAAAGAC 59.723 37.037 0.00 0.00 0.00 3.01
98 99 4.273148 ACAATGGCGAGAACTAAAGACT 57.727 40.909 0.00 0.00 0.00 3.24
99 100 4.642429 ACAATGGCGAGAACTAAAGACTT 58.358 39.130 0.00 0.00 0.00 3.01
100 101 5.063880 ACAATGGCGAGAACTAAAGACTTT 58.936 37.500 5.62 5.62 0.00 2.66
101 102 5.179555 ACAATGGCGAGAACTAAAGACTTTC 59.820 40.000 3.07 0.00 0.00 2.62
102 103 3.660865 TGGCGAGAACTAAAGACTTTCC 58.339 45.455 3.07 0.00 0.00 3.13
103 104 3.070446 TGGCGAGAACTAAAGACTTTCCA 59.930 43.478 3.07 0.24 0.00 3.53
104 105 4.254492 GGCGAGAACTAAAGACTTTCCAT 58.746 43.478 3.07 0.00 0.00 3.41
105 106 4.330347 GGCGAGAACTAAAGACTTTCCATC 59.670 45.833 3.07 1.63 0.00 3.51
106 107 4.031878 GCGAGAACTAAAGACTTTCCATCG 59.968 45.833 3.07 9.49 0.00 3.84
107 108 5.399858 CGAGAACTAAAGACTTTCCATCGA 58.600 41.667 3.07 0.00 0.00 3.59
108 109 5.513495 CGAGAACTAAAGACTTTCCATCGAG 59.487 44.000 3.07 0.00 0.00 4.04
109 110 5.725362 AGAACTAAAGACTTTCCATCGAGG 58.275 41.667 3.07 0.00 39.47 4.63
110 111 4.473477 ACTAAAGACTTTCCATCGAGGG 57.527 45.455 10.57 10.57 38.24 4.30
111 112 4.094476 ACTAAAGACTTTCCATCGAGGGA 58.906 43.478 16.22 16.22 38.24 4.20
112 113 4.717280 ACTAAAGACTTTCCATCGAGGGAT 59.283 41.667 21.12 4.78 36.67 3.85
113 114 5.897824 ACTAAAGACTTTCCATCGAGGGATA 59.102 40.000 21.12 14.52 36.67 2.59
114 115 4.674281 AAGACTTTCCATCGAGGGATAC 57.326 45.455 21.12 11.30 36.67 2.24
115 116 3.643237 AGACTTTCCATCGAGGGATACA 58.357 45.455 21.12 1.54 36.67 2.29
116 117 4.030913 AGACTTTCCATCGAGGGATACAA 58.969 43.478 21.12 10.56 36.67 2.41
117 118 4.469945 AGACTTTCCATCGAGGGATACAAA 59.530 41.667 21.12 10.18 36.67 2.83
118 119 4.770795 ACTTTCCATCGAGGGATACAAAG 58.229 43.478 21.12 21.03 36.95 2.77
119 120 2.910688 TCCATCGAGGGATACAAAGC 57.089 50.000 16.22 0.00 38.24 3.51
120 121 1.416401 TCCATCGAGGGATACAAAGCC 59.584 52.381 16.22 0.00 38.24 4.35
121 122 1.140852 CCATCGAGGGATACAAAGCCA 59.859 52.381 11.55 0.00 39.74 4.75
122 123 2.224621 CCATCGAGGGATACAAAGCCAT 60.225 50.000 11.55 0.00 39.74 4.40
123 124 2.620251 TCGAGGGATACAAAGCCATG 57.380 50.000 0.00 0.00 39.74 3.66
124 125 1.837439 TCGAGGGATACAAAGCCATGT 59.163 47.619 0.00 0.00 37.32 3.21
125 126 1.942657 CGAGGGATACAAAGCCATGTG 59.057 52.381 2.41 0.00 34.75 3.21
126 127 2.680805 CGAGGGATACAAAGCCATGTGT 60.681 50.000 2.41 0.00 34.75 3.72
127 128 2.945668 GAGGGATACAAAGCCATGTGTC 59.054 50.000 7.45 7.45 39.78 3.67
128 129 2.308570 AGGGATACAAAGCCATGTGTCA 59.691 45.455 15.06 0.00 41.58 3.58
129 130 3.053395 AGGGATACAAAGCCATGTGTCAT 60.053 43.478 15.06 3.98 41.58 3.06
130 131 3.067180 GGGATACAAAGCCATGTGTCATG 59.933 47.826 15.06 3.11 41.58 3.07
131 132 3.489738 GGATACAAAGCCATGTGTCATGC 60.490 47.826 15.06 1.43 41.58 4.06
132 133 1.330234 ACAAAGCCATGTGTCATGCA 58.670 45.000 4.43 0.00 30.82 3.96
140 141 3.876300 GTGTCATGCACCGAGGAC 58.124 61.111 8.54 0.00 42.10 3.85
141 142 1.293498 GTGTCATGCACCGAGGACT 59.707 57.895 8.54 0.00 42.10 3.85
142 143 0.320771 GTGTCATGCACCGAGGACTT 60.321 55.000 8.54 0.00 42.10 3.01
143 144 0.320683 TGTCATGCACCGAGGACTTG 60.321 55.000 0.00 0.00 0.00 3.16
144 145 1.021390 GTCATGCACCGAGGACTTGG 61.021 60.000 4.00 4.00 40.09 3.61
145 146 2.045926 ATGCACCGAGGACTTGGC 60.046 61.111 5.49 0.00 37.67 4.52
146 147 2.894257 ATGCACCGAGGACTTGGCA 61.894 57.895 5.49 0.00 37.67 4.92
147 148 3.050275 GCACCGAGGACTTGGCAC 61.050 66.667 5.49 0.00 37.67 5.01
148 149 2.358737 CACCGAGGACTTGGCACC 60.359 66.667 5.49 0.00 37.67 5.01
149 150 2.847234 ACCGAGGACTTGGCACCA 60.847 61.111 5.49 0.00 37.67 4.17
150 151 2.358737 CCGAGGACTTGGCACCAC 60.359 66.667 0.00 0.00 0.00 4.16
151 152 2.358737 CGAGGACTTGGCACCACC 60.359 66.667 0.00 0.00 39.84 4.61
152 153 2.883828 CGAGGACTTGGCACCACCT 61.884 63.158 5.43 5.43 40.22 4.00
178 179 6.203915 CCCTTTGTTTTATTAGTGGTTTTGCC 59.796 38.462 0.00 0.00 37.90 4.52
225 226 4.330347 GGCGAGAACTAAAGACTTTCCATC 59.670 45.833 3.07 1.63 0.00 3.51
232 233 4.717280 ACTAAAGACTTTCCATCGAGGGAT 59.283 41.667 21.12 4.78 36.67 3.85
245 246 1.942657 CGAGGGATACAAAGCCATGTG 59.057 52.381 2.41 0.00 34.75 3.21
250 251 3.067180 GGGATACAAAGCCATGTGTCATG 59.933 47.826 15.06 3.11 41.58 3.07
264 265 1.021390 GTCATGCACCGAGGACTTGG 61.021 60.000 4.00 4.00 40.09 3.61
272 273 2.883828 CGAGGACTTGGCACCACCT 61.884 63.158 5.43 5.43 40.22 4.00
329 330 8.183830 TGTGCAAATCATTAAATTCGATTTCC 57.816 30.769 0.00 0.00 37.28 3.13
331 332 6.760770 TGCAAATCATTAAATTCGATTTCCCC 59.239 34.615 0.00 0.00 37.28 4.81
353 354 1.079127 CCTCCACCATGTGTCGACC 60.079 63.158 14.12 5.06 0.00 4.79
377 378 3.857854 CATGGCGTCACGAGCAGC 61.858 66.667 0.00 0.00 36.08 5.25
417 438 6.091441 GCTTGTTAATTCACACACAAAAACCA 59.909 34.615 0.00 0.00 0.00 3.67
421 442 7.657761 TGTTAATTCACACACAAAAACCAACTT 59.342 29.630 0.00 0.00 0.00 2.66
481 505 0.981277 ACCTTGTATGTAGCCCCGCT 60.981 55.000 0.00 0.00 43.41 5.52
537 561 2.956964 GTGCTCGAAGATCCGCCG 60.957 66.667 0.00 0.00 33.89 6.46
582 656 2.437359 CCCAAAGGCGAGGCAGAG 60.437 66.667 0.00 0.00 0.00 3.35
585 659 1.222936 CAAAGGCGAGGCAGAGGAT 59.777 57.895 0.00 0.00 0.00 3.24
598 672 2.093021 GCAGAGGATGAAGAGGAAGCTT 60.093 50.000 0.00 0.00 0.00 3.74
654 728 1.102154 TGACAACACAACTTGGCAGG 58.898 50.000 0.00 0.00 34.02 4.85
661 735 1.375013 CAACTTGGCAGGGCAATGC 60.375 57.895 8.80 0.00 45.74 3.56
735 809 7.339212 TCTTTCCTAGAGAGAGACAGAGATTTG 59.661 40.741 0.00 0.00 30.98 2.32
762 836 4.010349 GAGAAGATAGTTTTGGTGGGTGG 58.990 47.826 0.00 0.00 0.00 4.61
763 837 2.899303 AGATAGTTTTGGTGGGTGGG 57.101 50.000 0.00 0.00 0.00 4.61
764 838 2.070573 AGATAGTTTTGGTGGGTGGGT 58.929 47.619 0.00 0.00 0.00 4.51
765 839 2.167662 GATAGTTTTGGTGGGTGGGTG 58.832 52.381 0.00 0.00 0.00 4.61
766 840 1.223501 TAGTTTTGGTGGGTGGGTGA 58.776 50.000 0.00 0.00 0.00 4.02
767 841 0.106217 AGTTTTGGTGGGTGGGTGAG 60.106 55.000 0.00 0.00 0.00 3.51
768 842 0.396556 GTTTTGGTGGGTGGGTGAGT 60.397 55.000 0.00 0.00 0.00 3.41
769 843 0.396417 TTTTGGTGGGTGGGTGAGTG 60.396 55.000 0.00 0.00 0.00 3.51
855 929 0.176680 CCACTTCATCCTCACCTCCG 59.823 60.000 0.00 0.00 0.00 4.63
879 953 1.343884 CCTTCCACTCATCTCCCTCCT 60.344 57.143 0.00 0.00 0.00 3.69
880 954 2.091055 CCTTCCACTCATCTCCCTCCTA 60.091 54.545 0.00 0.00 0.00 2.94
883 957 2.110899 TCCACTCATCTCCCTCCTATCC 59.889 54.545 0.00 0.00 0.00 2.59
920 995 0.253020 TCCTTAACCTCCCACCCCTC 60.253 60.000 0.00 0.00 0.00 4.30
922 997 1.230050 TTAACCTCCCACCCCTCCC 60.230 63.158 0.00 0.00 0.00 4.30
966 1068 1.069765 CCACCTTGATCGATCCCCG 59.930 63.158 22.31 11.38 40.25 5.73
967 1069 1.686325 CCACCTTGATCGATCCCCGT 61.686 60.000 22.31 12.00 39.75 5.28
984 1090 1.990614 GTCCACACTCCCTCCCTCC 60.991 68.421 0.00 0.00 0.00 4.30
986 1092 2.452114 CACACTCCCTCCCTCCCT 59.548 66.667 0.00 0.00 0.00 4.20
988 1094 2.041405 CACTCCCTCCCTCCCTCC 60.041 72.222 0.00 0.00 0.00 4.30
989 1095 3.369388 ACTCCCTCCCTCCCTCCC 61.369 72.222 0.00 0.00 0.00 4.30
990 1096 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
991 1097 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
992 1098 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
993 1099 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
994 1100 4.548513 CTCCCTCCCTCCCTCCCG 62.549 77.778 0.00 0.00 0.00 5.14
1054 1160 4.263572 CCGCAACCACCACCTCCA 62.264 66.667 0.00 0.00 0.00 3.86
1335 1447 0.608640 ACATGGTCTTCTCCACCGAC 59.391 55.000 0.00 0.00 40.51 4.79
1497 1617 4.944372 ATCCGTCGATTCCGCCGC 62.944 66.667 0.00 0.00 35.69 6.53
1534 1658 1.855360 GTCGCTGACTGAAATCGATCC 59.145 52.381 0.00 0.00 0.00 3.36
1584 1708 2.084681 CGTCTACACCAACGACGCC 61.085 63.158 0.00 0.00 43.02 5.68
1620 1744 0.449388 GCGTCTGCTCCAATTTCCTG 59.551 55.000 0.00 0.00 38.39 3.86
1669 1797 3.498927 AATCTGCATTTTTCGGCTCTG 57.501 42.857 0.00 0.00 0.00 3.35
1672 1805 2.884012 TCTGCATTTTTCGGCTCTGAAA 59.116 40.909 0.04 0.04 36.12 2.69
1679 1812 5.766150 TTTTTCGGCTCTGAAAAATCTGA 57.234 34.783 19.68 4.02 46.99 3.27
1721 1858 3.251004 CAGTGTTCAGTTTAGTTCAGGCC 59.749 47.826 0.00 0.00 0.00 5.19
1796 1934 9.573166 TTATACACATTCCTGCTAATGCTATTT 57.427 29.630 6.84 0.00 39.93 1.40
1797 1935 6.382869 ACACATTCCTGCTAATGCTATTTC 57.617 37.500 6.84 0.00 39.93 2.17
1800 1938 7.137426 CACATTCCTGCTAATGCTATTTCTTC 58.863 38.462 6.84 0.00 39.93 2.87
1802 1940 7.504911 ACATTCCTGCTAATGCTATTTCTTCAT 59.495 33.333 6.84 0.00 39.93 2.57
1814 1952 7.160049 TGCTATTTCTTCATTGCAATCCAAAA 58.840 30.769 9.53 8.38 36.92 2.44
1825 1964 9.681692 TCATTGCAATCCAAAATAATTATCTCG 57.318 29.630 9.53 0.00 36.92 4.04
1869 2025 0.040058 TCTGTTGCATTGCATCCCCT 59.960 50.000 12.95 0.00 38.76 4.79
1870 2026 0.174845 CTGTTGCATTGCATCCCCTG 59.825 55.000 12.95 2.05 38.76 4.45
1871 2027 0.542467 TGTTGCATTGCATCCCCTGT 60.542 50.000 12.95 0.00 38.76 4.00
1872 2028 1.272369 TGTTGCATTGCATCCCCTGTA 60.272 47.619 12.95 0.00 38.76 2.74
1873 2029 1.134946 GTTGCATTGCATCCCCTGTAC 59.865 52.381 12.95 0.97 38.76 2.90
1874 2030 0.625316 TGCATTGCATCCCCTGTACT 59.375 50.000 7.38 0.00 31.71 2.73
1876 2032 1.678101 GCATTGCATCCCCTGTACTTC 59.322 52.381 3.15 0.00 0.00 3.01
1947 2103 2.548280 CGAGGCTCTGCAGATCATCAAT 60.548 50.000 26.18 7.11 0.00 2.57
1956 2112 7.255173 GCTCTGCAGATCATCAATAATCTGTTT 60.255 37.037 18.63 0.00 46.89 2.83
1960 2116 9.617523 TGCAGATCATCAATAATCTGTTTCTTA 57.382 29.630 12.47 0.00 46.89 2.10
2059 2217 4.439057 TGTCTGAACAAGGTGTTAGTGTC 58.561 43.478 0.00 0.00 41.28 3.67
2139 2297 5.161358 GTGCCAATGAATATCTGCATCATG 58.839 41.667 0.64 0.00 34.21 3.07
2324 2769 5.928839 TGCTACTGTTCAGAATTCAGAGTTC 59.071 40.000 8.44 0.00 33.93 3.01
2329 2774 5.116180 TGTTCAGAATTCAGAGTTCGTTGT 58.884 37.500 8.44 0.00 0.00 3.32
2345 2790 2.414559 CGTTGTATTCAGGCTTTGCAGG 60.415 50.000 0.00 0.00 0.00 4.85
2346 2791 1.176527 TGTATTCAGGCTTTGCAGGC 58.823 50.000 5.35 5.35 46.34 4.85
2352 2797 3.458653 GGCTTTGCAGGCTTTCCA 58.541 55.556 12.30 0.00 42.53 3.53
2353 2798 1.291272 GGCTTTGCAGGCTTTCCAG 59.709 57.895 12.30 0.00 42.53 3.86
2501 2950 4.642437 TCTCACTGGCATGTTTGTTGTTTA 59.358 37.500 0.00 0.00 0.00 2.01
2507 2957 3.186205 GGCATGTTTGTTGTTTACCATGC 59.814 43.478 12.61 12.61 42.16 4.06
2556 3006 1.670811 GATGTCAACATAACAGGGCCG 59.329 52.381 0.00 0.00 36.57 6.13
2622 3072 1.746615 CATGGTGAGCCTGAACCCG 60.747 63.158 0.00 0.00 35.44 5.28
2626 3076 1.596934 GTGAGCCTGAACCCGATGA 59.403 57.895 0.00 0.00 0.00 2.92
2639 3089 7.220741 TGAACCCGATGATTAAAACATTCAA 57.779 32.000 0.00 0.00 0.00 2.69
2680 3130 5.815581 ACTGATGGCCAACTAGTAATTTCA 58.184 37.500 10.96 3.50 0.00 2.69
2757 3207 6.015940 GGTCATTCTTGTGGAAGATGTTCTTT 60.016 38.462 2.24 0.00 36.73 2.52
2766 3216 7.453393 TGTGGAAGATGTTCTTTGAGAAGTAT 58.547 34.615 2.24 0.00 36.73 2.12
2798 3250 9.982651 CTACAAGGTAATACATACATAGTGCTT 57.017 33.333 0.00 0.00 36.14 3.91
2816 3268 6.118170 AGTGCTTATGATGTTTGTCTGCTAT 58.882 36.000 0.00 0.00 0.00 2.97
2873 3328 6.522625 TCACAAGAAACCTGAATCAACAAA 57.477 33.333 0.00 0.00 0.00 2.83
2917 3372 2.161855 CTTGTGCAGTTCAATGGCCTA 58.838 47.619 3.32 0.00 0.00 3.93
3045 3505 5.909610 GCTACTTCATTGTTTCTTGTGACAC 59.090 40.000 0.00 0.00 0.00 3.67
3046 3506 6.238484 GCTACTTCATTGTTTCTTGTGACACT 60.238 38.462 7.20 0.00 0.00 3.55
3048 3508 6.324819 ACTTCATTGTTTCTTGTGACACTTG 58.675 36.000 7.20 0.00 0.00 3.16
3057 3524 7.067372 TGTTTCTTGTGACACTTGATCATCTTT 59.933 33.333 7.20 0.00 0.00 2.52
3237 3707 2.811873 GCTGTGGGAGCTTCTGAAGAAA 60.812 50.000 21.06 0.00 45.21 2.52
3333 3803 7.455058 TGGCTTCAAAAGAAGGTACTACAATA 58.545 34.615 7.28 0.00 38.49 1.90
3381 3878 9.462174 TTTTTGTTGATACAATAACTTGAGCAG 57.538 29.630 0.00 0.00 43.43 4.24
3383 3880 8.165239 TTGTTGATACAATAACTTGAGCAGTT 57.835 30.769 0.00 0.00 42.64 3.16
3385 3882 9.278978 TGTTGATACAATAACTTGAGCAGTTTA 57.721 29.630 0.00 0.00 43.89 2.01
3387 3884 9.502091 TTGATACAATAACTTGAGCAGTTTAGT 57.498 29.630 0.00 0.00 43.89 2.24
3388 3885 8.935844 TGATACAATAACTTGAGCAGTTTAGTG 58.064 33.333 0.00 0.00 43.89 2.74
3389 3886 6.002062 ACAATAACTTGAGCAGTTTAGTGC 57.998 37.500 1.26 1.26 43.89 4.40
3390 3887 4.928661 ATAACTTGAGCAGTTTAGTGCG 57.071 40.909 4.05 0.00 43.89 5.34
3392 3889 3.202906 AACTTGAGCAGTTTAGTGCGAA 58.797 40.909 4.05 1.51 43.89 4.70
3396 3893 3.312709 GCAGTTTAGTGCGAATGGC 57.687 52.632 0.00 0.00 43.96 4.40
3408 3915 0.641783 CGAATGGCGCTGAATTTTGC 59.358 50.000 7.64 0.00 0.00 3.68
3416 3923 1.778591 CGCTGAATTTTGCGTCGTTTT 59.221 42.857 14.94 0.00 46.09 2.43
3418 3925 2.786578 GCTGAATTTTGCGTCGTTTTGA 59.213 40.909 0.00 0.00 0.00 2.69
3419 3926 3.360669 GCTGAATTTTGCGTCGTTTTGAC 60.361 43.478 0.00 0.00 44.53 3.18
3444 3951 2.750712 GCTAGGGATCGACTGGATAGAC 59.249 54.545 4.01 0.00 34.82 2.59
3499 4006 4.379186 GGAACGTCGAAGTCTACTGATTCA 60.379 45.833 4.00 0.00 0.00 2.57
3505 4012 5.864474 GTCGAAGTCTACTGATTCATGTGTT 59.136 40.000 0.00 0.00 0.00 3.32
3507 4014 6.586463 TCGAAGTCTACTGATTCATGTGTTTC 59.414 38.462 0.00 0.00 0.00 2.78
3515 4022 7.756395 ACTGATTCATGTGTTTCTCATTCTT 57.244 32.000 0.00 0.00 0.00 2.52
3517 4024 6.916440 TGATTCATGTGTTTCTCATTCTTGG 58.084 36.000 0.00 0.00 0.00 3.61
3650 4159 4.830600 TCCTGGTTTATTTCAACTCCCAAC 59.169 41.667 0.00 0.00 0.00 3.77
3682 4191 5.308237 CCACTACTATCCCCTCTGCTAAAAT 59.692 44.000 0.00 0.00 0.00 1.82
3683 4192 6.183361 CCACTACTATCCCCTCTGCTAAAATT 60.183 42.308 0.00 0.00 0.00 1.82
3684 4193 6.931840 CACTACTATCCCCTCTGCTAAAATTC 59.068 42.308 0.00 0.00 0.00 2.17
3726 4238 7.377398 TCAAATAATGCCATTGCCATGTATAC 58.623 34.615 0.00 0.00 36.33 1.47
3928 4441 4.393371 GGATCAGAACCTAAACAGCTTCAC 59.607 45.833 0.00 0.00 0.00 3.18
3993 4512 1.442769 CGGTCTCACAAGAACATGGG 58.557 55.000 0.00 0.00 39.36 4.00
3994 4513 1.826385 GGTCTCACAAGAACATGGGG 58.174 55.000 0.00 0.00 39.20 4.96
3996 4515 2.224769 GGTCTCACAAGAACATGGGGAA 60.225 50.000 0.00 0.00 39.20 3.97
4054 4586 3.386402 CACTTGTTAACACCCACCCAATT 59.614 43.478 8.07 0.00 0.00 2.32
4080 4612 0.112412 GGGCTCCTCTGTTTTCCCAA 59.888 55.000 0.00 0.00 34.01 4.12
4085 4617 3.441922 GCTCCTCTGTTTTCCCAATCTTC 59.558 47.826 0.00 0.00 0.00 2.87
4103 4644 1.451567 CAGTCAGGGCTGCATCTGG 60.452 63.158 17.79 3.59 0.00 3.86
4106 4647 1.614525 TCAGGGCTGCATCTGGACT 60.615 57.895 17.79 0.00 0.00 3.85
4121 4662 0.249031 GGACTTGCACCTGTTGTTGC 60.249 55.000 0.00 0.00 0.00 4.17
4127 4668 1.147557 GCACCTGTTGTTGCTGTTGC 61.148 55.000 0.00 0.00 40.20 4.17
4130 4671 0.872881 CCTGTTGTTGCTGTTGCTGC 60.873 55.000 0.00 0.00 40.48 5.25
4180 4724 2.158928 GCTCTCTGTCATCCTCTGCAAT 60.159 50.000 0.00 0.00 0.00 3.56
4295 4839 2.878406 GCGCCATTATATTGTCAGGTGT 59.122 45.455 0.00 0.00 0.00 4.16
4298 4842 4.377021 GCCATTATATTGTCAGGTGTCGA 58.623 43.478 0.00 0.00 0.00 4.20
4314 4858 1.849219 GTCGAGTCGAGTCAATCATGC 59.151 52.381 17.12 0.00 36.23 4.06
4322 4873 1.662629 GAGTCAATCATGCGTGGACAG 59.337 52.381 13.93 0.78 0.00 3.51
4324 4875 1.129251 GTCAATCATGCGTGGACAGTG 59.871 52.381 5.98 0.00 0.00 3.66
4325 4876 0.448990 CAATCATGCGTGGACAGTGG 59.551 55.000 5.98 0.00 0.00 4.00
4326 4877 0.324614 AATCATGCGTGGACAGTGGA 59.675 50.000 5.98 0.00 0.00 4.02
4327 4878 0.391661 ATCATGCGTGGACAGTGGAC 60.392 55.000 5.98 0.00 0.00 4.02
4329 4880 1.301716 ATGCGTGGACAGTGGACAC 60.302 57.895 8.83 8.83 0.00 3.67
4331 4882 1.110518 TGCGTGGACAGTGGACACTA 61.111 55.000 14.80 4.37 40.20 2.74
4334 4885 0.037232 GTGGACAGTGGACACTAGGC 60.037 60.000 4.41 2.32 40.20 3.93
4335 4886 0.471022 TGGACAGTGGACACTAGGCA 60.471 55.000 4.41 0.00 40.20 4.75
4336 4887 0.247736 GGACAGTGGACACTAGGCAG 59.752 60.000 4.41 0.00 40.20 4.85
4337 4888 0.247736 GACAGTGGACACTAGGCAGG 59.752 60.000 4.41 0.00 40.20 4.85
4339 4890 0.036952 CAGTGGACACTAGGCAGGTG 60.037 60.000 4.41 8.02 40.20 4.00
4340 4891 1.376037 GTGGACACTAGGCAGGTGC 60.376 63.158 9.23 0.00 38.14 5.01
4357 4917 2.562635 GTGCATGCATGATCTCTCAGT 58.437 47.619 30.64 0.00 34.12 3.41
4358 4918 2.288186 GTGCATGCATGATCTCTCAGTG 59.712 50.000 30.64 0.46 34.12 3.66
4359 4919 2.093128 TGCATGCATGATCTCTCAGTGT 60.093 45.455 30.64 0.00 34.12 3.55
4360 4920 2.544686 GCATGCATGATCTCTCAGTGTC 59.455 50.000 30.64 3.61 34.12 3.67
4381 4941 4.388469 GTCTGTCTGAAACTCTGAATCTGC 59.612 45.833 0.00 0.00 0.00 4.26
4385 4945 4.934001 GTCTGAAACTCTGAATCTGCATGA 59.066 41.667 0.00 0.00 0.00 3.07
4386 4946 5.585445 GTCTGAAACTCTGAATCTGCATGAT 59.415 40.000 0.00 0.00 36.89 2.45
4388 4948 5.493809 TGAAACTCTGAATCTGCATGATCA 58.506 37.500 0.00 0.00 33.57 2.92
4389 4949 5.585047 TGAAACTCTGAATCTGCATGATCAG 59.415 40.000 13.65 13.65 33.57 2.90
4390 4950 4.074627 ACTCTGAATCTGCATGATCAGG 57.925 45.455 17.57 2.22 34.30 3.86
4391 4951 3.455177 ACTCTGAATCTGCATGATCAGGT 59.545 43.478 17.57 13.08 34.30 4.00
4392 4952 3.805207 TCTGAATCTGCATGATCAGGTG 58.195 45.455 17.57 0.19 34.30 4.00
4400 4961 1.092348 CATGATCAGGTGTGGTGCTG 58.908 55.000 0.09 0.00 0.00 4.41
4418 4979 0.400213 TGGTGGAATGGTGAGGTGTC 59.600 55.000 0.00 0.00 0.00 3.67
4420 4981 1.003839 TGGAATGGTGAGGTGTCGC 60.004 57.895 0.00 0.00 0.00 5.19
4421 4982 1.003839 GGAATGGTGAGGTGTCGCA 60.004 57.895 0.00 0.00 34.60 5.10
4424 4985 0.973632 AATGGTGAGGTGTCGCAGTA 59.026 50.000 0.00 0.00 34.60 2.74
4425 4986 1.195115 ATGGTGAGGTGTCGCAGTAT 58.805 50.000 0.00 0.00 34.60 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 7.763985 GGGTACAAAATTATGATGAAAACCCAG 59.236 37.037 0.00 0.00 0.00 4.45
32 33 7.254966 GGCAAAACCACTAATAAAACAAAAGGG 60.255 37.037 0.00 0.00 38.86 3.95
33 34 7.517575 CGGCAAAACCACTAATAAAACAAAAGG 60.518 37.037 0.00 0.00 39.03 3.11
34 35 7.010645 ACGGCAAAACCACTAATAAAACAAAAG 59.989 33.333 0.00 0.00 39.03 2.27
35 36 6.817140 ACGGCAAAACCACTAATAAAACAAAA 59.183 30.769 0.00 0.00 39.03 2.44
36 37 6.255887 CACGGCAAAACCACTAATAAAACAAA 59.744 34.615 0.00 0.00 39.03 2.83
37 38 5.749109 CACGGCAAAACCACTAATAAAACAA 59.251 36.000 0.00 0.00 39.03 2.83
38 39 5.067413 TCACGGCAAAACCACTAATAAAACA 59.933 36.000 0.00 0.00 39.03 2.83
39 40 5.400188 GTCACGGCAAAACCACTAATAAAAC 59.600 40.000 0.00 0.00 39.03 2.43
40 41 5.507650 GGTCACGGCAAAACCACTAATAAAA 60.508 40.000 0.00 0.00 39.03 1.52
41 42 4.023021 GGTCACGGCAAAACCACTAATAAA 60.023 41.667 0.00 0.00 39.03 1.40
42 43 3.502979 GGTCACGGCAAAACCACTAATAA 59.497 43.478 0.00 0.00 39.03 1.40
43 44 3.075884 GGTCACGGCAAAACCACTAATA 58.924 45.455 0.00 0.00 39.03 0.98
44 45 1.883926 GGTCACGGCAAAACCACTAAT 59.116 47.619 0.00 0.00 39.03 1.73
45 46 1.134037 AGGTCACGGCAAAACCACTAA 60.134 47.619 2.53 0.00 39.03 2.24
46 47 0.470766 AGGTCACGGCAAAACCACTA 59.529 50.000 2.53 0.00 39.03 2.74
47 48 0.395173 AAGGTCACGGCAAAACCACT 60.395 50.000 2.53 0.00 39.03 4.00
48 49 0.458260 AAAGGTCACGGCAAAACCAC 59.542 50.000 2.53 0.00 39.03 4.16
49 50 1.134965 CAAAAGGTCACGGCAAAACCA 60.135 47.619 2.53 0.00 39.03 3.67
50 51 1.566404 CAAAAGGTCACGGCAAAACC 58.434 50.000 0.00 0.00 0.00 3.27
51 52 1.134936 ACCAAAAGGTCACGGCAAAAC 60.135 47.619 0.00 0.00 0.00 2.43
52 53 1.134965 CACCAAAAGGTCACGGCAAAA 60.135 47.619 0.00 0.00 0.00 2.44
53 54 0.457851 CACCAAAAGGTCACGGCAAA 59.542 50.000 0.00 0.00 0.00 3.68
54 55 0.681564 ACACCAAAAGGTCACGGCAA 60.682 50.000 0.00 0.00 0.00 4.52
55 56 0.681564 AACACCAAAAGGTCACGGCA 60.682 50.000 0.00 0.00 0.00 5.69
56 57 1.310904 TAACACCAAAAGGTCACGGC 58.689 50.000 0.00 0.00 0.00 5.68
57 58 4.066490 TGTATAACACCAAAAGGTCACGG 58.934 43.478 0.00 0.00 0.00 4.94
58 59 5.676532 TTGTATAACACCAAAAGGTCACG 57.323 39.130 0.00 0.00 0.00 4.35
59 60 6.386654 CCATTGTATAACACCAAAAGGTCAC 58.613 40.000 0.00 0.00 0.00 3.67
60 61 5.047660 GCCATTGTATAACACCAAAAGGTCA 60.048 40.000 0.00 0.00 0.00 4.02
61 62 5.407502 GCCATTGTATAACACCAAAAGGTC 58.592 41.667 0.00 0.00 0.00 3.85
62 63 4.082463 CGCCATTGTATAACACCAAAAGGT 60.082 41.667 0.00 0.00 0.00 3.50
63 64 4.156922 TCGCCATTGTATAACACCAAAAGG 59.843 41.667 0.00 0.00 0.00 3.11
64 65 5.123186 TCTCGCCATTGTATAACACCAAAAG 59.877 40.000 0.00 0.00 0.00 2.27
65 66 5.004448 TCTCGCCATTGTATAACACCAAAA 58.996 37.500 0.00 0.00 0.00 2.44
66 67 4.580868 TCTCGCCATTGTATAACACCAAA 58.419 39.130 0.00 0.00 0.00 3.28
67 68 4.209307 TCTCGCCATTGTATAACACCAA 57.791 40.909 0.00 0.00 0.00 3.67
68 69 3.897141 TCTCGCCATTGTATAACACCA 57.103 42.857 0.00 0.00 0.00 4.17
69 70 4.189231 AGTTCTCGCCATTGTATAACACC 58.811 43.478 0.00 0.00 0.00 4.16
70 71 6.897259 TTAGTTCTCGCCATTGTATAACAC 57.103 37.500 0.00 0.00 0.00 3.32
71 72 7.277098 GTCTTTAGTTCTCGCCATTGTATAACA 59.723 37.037 0.00 0.00 0.00 2.41
72 73 7.491696 AGTCTTTAGTTCTCGCCATTGTATAAC 59.508 37.037 0.00 0.00 0.00 1.89
73 74 7.553334 AGTCTTTAGTTCTCGCCATTGTATAA 58.447 34.615 0.00 0.00 0.00 0.98
74 75 7.108841 AGTCTTTAGTTCTCGCCATTGTATA 57.891 36.000 0.00 0.00 0.00 1.47
75 76 5.978814 AGTCTTTAGTTCTCGCCATTGTAT 58.021 37.500 0.00 0.00 0.00 2.29
76 77 5.401531 AGTCTTTAGTTCTCGCCATTGTA 57.598 39.130 0.00 0.00 0.00 2.41
77 78 4.273148 AGTCTTTAGTTCTCGCCATTGT 57.727 40.909 0.00 0.00 0.00 2.71
78 79 5.390991 GGAAAGTCTTTAGTTCTCGCCATTG 60.391 44.000 0.00 0.00 0.00 2.82
79 80 4.695928 GGAAAGTCTTTAGTTCTCGCCATT 59.304 41.667 0.00 0.00 0.00 3.16
80 81 4.254492 GGAAAGTCTTTAGTTCTCGCCAT 58.746 43.478 0.00 0.00 0.00 4.40
81 82 3.070446 TGGAAAGTCTTTAGTTCTCGCCA 59.930 43.478 0.00 0.00 0.00 5.69
82 83 3.660865 TGGAAAGTCTTTAGTTCTCGCC 58.339 45.455 0.00 0.00 0.00 5.54
83 84 4.031878 CGATGGAAAGTCTTTAGTTCTCGC 59.968 45.833 0.00 0.00 0.00 5.03
84 85 5.399858 TCGATGGAAAGTCTTTAGTTCTCG 58.600 41.667 0.00 3.90 0.00 4.04
85 86 5.808030 CCTCGATGGAAAGTCTTTAGTTCTC 59.192 44.000 0.00 0.00 38.35 2.87
86 87 5.337652 CCCTCGATGGAAAGTCTTTAGTTCT 60.338 44.000 0.00 0.00 38.35 3.01
87 88 4.870991 CCCTCGATGGAAAGTCTTTAGTTC 59.129 45.833 0.00 0.00 38.35 3.01
88 89 4.530946 TCCCTCGATGGAAAGTCTTTAGTT 59.469 41.667 7.01 0.00 38.35 2.24
89 90 4.094476 TCCCTCGATGGAAAGTCTTTAGT 58.906 43.478 7.01 0.00 38.35 2.24
90 91 4.737855 TCCCTCGATGGAAAGTCTTTAG 57.262 45.455 7.01 0.00 38.35 1.85
91 92 5.659525 TGTATCCCTCGATGGAAAGTCTTTA 59.340 40.000 13.75 0.00 38.10 1.85
92 93 4.469945 TGTATCCCTCGATGGAAAGTCTTT 59.530 41.667 13.75 0.00 38.10 2.52
93 94 4.030913 TGTATCCCTCGATGGAAAGTCTT 58.969 43.478 13.75 0.00 38.10 3.01
94 95 3.643237 TGTATCCCTCGATGGAAAGTCT 58.357 45.455 13.75 0.00 38.10 3.24
95 96 4.402056 TTGTATCCCTCGATGGAAAGTC 57.598 45.455 13.75 5.45 38.10 3.01
96 97 4.770795 CTTTGTATCCCTCGATGGAAAGT 58.229 43.478 13.75 0.07 38.10 2.66
97 98 3.561725 GCTTTGTATCCCTCGATGGAAAG 59.438 47.826 13.75 12.81 38.10 2.62
98 99 3.541632 GCTTTGTATCCCTCGATGGAAA 58.458 45.455 13.75 0.97 38.10 3.13
99 100 2.158813 GGCTTTGTATCCCTCGATGGAA 60.159 50.000 13.75 0.99 38.10 3.53
100 101 1.416401 GGCTTTGTATCCCTCGATGGA 59.584 52.381 12.12 12.12 39.18 3.41
101 102 1.140852 TGGCTTTGTATCCCTCGATGG 59.859 52.381 0.00 0.00 0.00 3.51
102 103 2.620251 TGGCTTTGTATCCCTCGATG 57.380 50.000 0.00 0.00 0.00 3.84
103 104 2.439507 ACATGGCTTTGTATCCCTCGAT 59.560 45.455 0.00 0.00 0.00 3.59
104 105 1.837439 ACATGGCTTTGTATCCCTCGA 59.163 47.619 0.00 0.00 0.00 4.04
105 106 1.942657 CACATGGCTTTGTATCCCTCG 59.057 52.381 0.00 0.00 0.00 4.63
106 107 2.945668 GACACATGGCTTTGTATCCCTC 59.054 50.000 0.00 0.00 0.00 4.30
107 108 2.308570 TGACACATGGCTTTGTATCCCT 59.691 45.455 0.00 0.00 0.00 4.20
108 109 2.722094 TGACACATGGCTTTGTATCCC 58.278 47.619 0.00 0.00 0.00 3.85
109 110 3.489738 GCATGACACATGGCTTTGTATCC 60.490 47.826 12.56 0.00 0.00 2.59
110 111 3.129113 TGCATGACACATGGCTTTGTATC 59.871 43.478 12.56 0.00 0.00 2.24
111 112 3.090790 TGCATGACACATGGCTTTGTAT 58.909 40.909 12.56 0.00 0.00 2.29
112 113 2.512705 TGCATGACACATGGCTTTGTA 58.487 42.857 12.56 0.00 0.00 2.41
113 114 1.330234 TGCATGACACATGGCTTTGT 58.670 45.000 12.56 0.00 0.00 2.83
124 125 0.320683 CAAGTCCTCGGTGCATGACA 60.321 55.000 0.00 0.00 0.00 3.58
125 126 1.021390 CCAAGTCCTCGGTGCATGAC 61.021 60.000 0.00 0.00 0.00 3.06
126 127 1.296392 CCAAGTCCTCGGTGCATGA 59.704 57.895 0.00 0.00 0.00 3.07
127 128 2.401766 GCCAAGTCCTCGGTGCATG 61.402 63.158 0.00 0.00 0.00 4.06
128 129 2.045926 GCCAAGTCCTCGGTGCAT 60.046 61.111 0.00 0.00 0.00 3.96
129 130 3.555324 TGCCAAGTCCTCGGTGCA 61.555 61.111 0.00 0.00 0.00 4.57
130 131 3.050275 GTGCCAAGTCCTCGGTGC 61.050 66.667 0.00 0.00 0.00 5.01
131 132 2.358737 GGTGCCAAGTCCTCGGTG 60.359 66.667 0.00 0.00 0.00 4.94
132 133 2.847234 TGGTGCCAAGTCCTCGGT 60.847 61.111 0.00 0.00 0.00 4.69
133 134 2.358737 GTGGTGCCAAGTCCTCGG 60.359 66.667 0.00 0.00 0.00 4.63
134 135 2.358737 GGTGGTGCCAAGTCCTCG 60.359 66.667 0.00 0.00 37.17 4.63
135 136 1.003233 GAGGTGGTGCCAAGTCCTC 60.003 63.158 9.64 9.64 40.61 3.71
136 137 2.529744 GGAGGTGGTGCCAAGTCCT 61.530 63.158 11.10 5.89 40.61 3.85
137 138 2.034221 GGAGGTGGTGCCAAGTCC 59.966 66.667 4.83 4.83 40.61 3.85
138 139 2.034221 GGGAGGTGGTGCCAAGTC 59.966 66.667 0.00 0.00 40.61 3.01
139 140 1.655114 AAAGGGAGGTGGTGCCAAGT 61.655 55.000 0.00 0.00 39.84 3.16
140 141 1.153756 AAAGGGAGGTGGTGCCAAG 59.846 57.895 0.00 0.00 39.84 3.61
141 142 1.152567 CAAAGGGAGGTGGTGCCAA 60.153 57.895 0.00 0.00 39.84 4.52
142 143 1.943730 AACAAAGGGAGGTGGTGCCA 61.944 55.000 0.00 0.00 39.84 4.92
143 144 0.759060 AAACAAAGGGAGGTGGTGCC 60.759 55.000 0.00 0.00 36.73 5.01
144 145 1.119684 AAAACAAAGGGAGGTGGTGC 58.880 50.000 0.00 0.00 0.00 5.01
145 146 5.773176 ACTAATAAAACAAAGGGAGGTGGTG 59.227 40.000 0.00 0.00 0.00 4.17
146 147 5.773176 CACTAATAAAACAAAGGGAGGTGGT 59.227 40.000 0.00 0.00 0.00 4.16
147 148 5.185056 CCACTAATAAAACAAAGGGAGGTGG 59.815 44.000 0.00 0.00 34.43 4.61
148 149 5.773176 ACCACTAATAAAACAAAGGGAGGTG 59.227 40.000 0.00 0.00 0.00 4.00
149 150 5.960704 ACCACTAATAAAACAAAGGGAGGT 58.039 37.500 0.00 0.00 0.00 3.85
150 151 6.911250 AACCACTAATAAAACAAAGGGAGG 57.089 37.500 0.00 0.00 0.00 4.30
151 152 7.170828 GCAAAACCACTAATAAAACAAAGGGAG 59.829 37.037 0.00 0.00 0.00 4.30
152 153 6.987404 GCAAAACCACTAATAAAACAAAGGGA 59.013 34.615 0.00 0.00 0.00 4.20
178 179 5.676532 TTGTATAACACCAAAAGGTCACG 57.323 39.130 0.00 0.00 0.00 4.35
225 226 1.942657 CACATGGCTTTGTATCCCTCG 59.057 52.381 0.00 0.00 0.00 4.63
232 233 2.512705 TGCATGACACATGGCTTTGTA 58.487 42.857 12.56 0.00 0.00 2.41
245 246 1.021390 CCAAGTCCTCGGTGCATGAC 61.021 60.000 0.00 0.00 0.00 3.06
250 251 3.050275 GTGCCAAGTCCTCGGTGC 61.050 66.667 0.00 0.00 0.00 5.01
264 265 1.369091 CGCCAATACTGAGGTGGTGC 61.369 60.000 0.71 0.00 36.22 5.01
306 307 6.760770 GGGGAAATCGAATTTAATGATTTGCA 59.239 34.615 17.23 0.00 46.10 4.08
329 330 1.377202 CACATGGTGGAGGTTCGGG 60.377 63.158 0.00 0.00 0.00 5.14
331 332 1.014044 CGACACATGGTGGAGGTTCG 61.014 60.000 0.00 0.00 37.94 3.95
353 354 3.434319 GTGACGCCATGCCCACAG 61.434 66.667 0.00 0.00 31.95 3.66
432 453 1.780503 GTGCCCCTAAGCCAAATGAT 58.219 50.000 0.00 0.00 0.00 2.45
518 542 2.496817 GCGGATCTTCGAGCACCT 59.503 61.111 0.00 0.00 0.00 4.00
519 543 2.586357 GGCGGATCTTCGAGCACC 60.586 66.667 0.00 0.00 0.00 5.01
525 549 4.812476 TGTGGCGGCGGATCTTCG 62.812 66.667 9.78 0.00 0.00 3.79
564 636 2.927856 TCTGCCTCGCCTTTGGGA 60.928 61.111 0.00 0.00 33.58 4.37
577 649 1.485895 AGCTTCCTCTTCATCCTCTGC 59.514 52.381 0.00 0.00 0.00 4.26
582 656 1.208293 ACGGAAGCTTCCTCTTCATCC 59.792 52.381 36.30 13.87 45.33 3.51
585 659 1.000955 GACACGGAAGCTTCCTCTTCA 59.999 52.381 36.30 0.00 45.33 3.02
613 687 2.051345 CACAAAAGTGTCGCCGGC 60.051 61.111 19.07 19.07 35.07 6.13
617 691 0.664166 CATGGCCACAAAAGTGTCGC 60.664 55.000 8.16 0.00 40.77 5.19
620 694 1.774110 TGTCATGGCCACAAAAGTGT 58.226 45.000 8.16 0.00 39.07 3.55
654 728 4.143333 CTGCCTGCCTGCATTGCC 62.143 66.667 6.12 0.00 41.16 4.52
664 738 2.446848 TATCTCCCTGCCTGCCTGC 61.447 63.158 0.00 0.00 0.00 4.85
735 809 6.070710 ACCCACCAAAACTATCTTCTCTCTAC 60.071 42.308 0.00 0.00 0.00 2.59
762 836 1.000283 CCACTCACTCACTCACTCACC 60.000 57.143 0.00 0.00 0.00 4.02
763 837 1.604185 GCCACTCACTCACTCACTCAC 60.604 57.143 0.00 0.00 0.00 3.51
764 838 0.676184 GCCACTCACTCACTCACTCA 59.324 55.000 0.00 0.00 0.00 3.41
765 839 0.037790 GGCCACTCACTCACTCACTC 60.038 60.000 0.00 0.00 0.00 3.51
766 840 0.470833 AGGCCACTCACTCACTCACT 60.471 55.000 5.01 0.00 0.00 3.41
767 841 0.394565 AAGGCCACTCACTCACTCAC 59.605 55.000 5.01 0.00 0.00 3.51
768 842 0.394192 CAAGGCCACTCACTCACTCA 59.606 55.000 5.01 0.00 0.00 3.41
769 843 0.321122 CCAAGGCCACTCACTCACTC 60.321 60.000 5.01 0.00 0.00 3.51
855 929 0.463474 GGAGATGAGTGGAAGGCAGC 60.463 60.000 0.00 0.00 0.00 5.25
879 953 0.327191 GGGAGGGAAGGTGGTGGATA 60.327 60.000 0.00 0.00 0.00 2.59
880 954 1.619669 GGGAGGGAAGGTGGTGGAT 60.620 63.158 0.00 0.00 0.00 3.41
883 957 4.410400 GCGGGAGGGAAGGTGGTG 62.410 72.222 0.00 0.00 0.00 4.17
966 1068 1.990614 GGAGGGAGGGAGTGTGGAC 60.991 68.421 0.00 0.00 0.00 4.02
967 1069 2.450243 GGAGGGAGGGAGTGTGGA 59.550 66.667 0.00 0.00 0.00 4.02
1041 1147 2.154074 GGAGGTGGAGGTGGTGGTT 61.154 63.158 0.00 0.00 0.00 3.67
1497 1617 1.845809 GACAAGCAGTGCCAACGGAG 61.846 60.000 12.58 0.00 0.00 4.63
1584 1708 3.771160 CCCTTGACGACCTCCCCG 61.771 72.222 0.00 0.00 0.00 5.73
1685 1818 7.948278 ACTGAACACTGTTAAGTCTGAATAC 57.052 36.000 6.13 0.00 32.98 1.89
1721 1858 6.541278 TCATCCTGATATCTGAACTGCAAAAG 59.459 38.462 10.93 0.00 0.00 2.27
1773 1911 7.282585 AGAAATAGCATTAGCAGGAATGTGTA 58.717 34.615 7.55 2.22 45.49 2.90
1800 1938 8.918658 CCGAGATAATTATTTTGGATTGCAATG 58.081 33.333 18.59 0.00 0.00 2.82
1802 1940 6.922957 GCCGAGATAATTATTTTGGATTGCAA 59.077 34.615 21.38 0.00 0.00 4.08
1814 1952 6.350445 GCCAAATCCATTGCCGAGATAATTAT 60.350 38.462 0.00 0.00 37.73 1.28
1825 1964 2.093341 ACATTCTGCCAAATCCATTGCC 60.093 45.455 0.00 0.00 37.73 4.52
1842 1981 4.325028 TGCAATGCAACAGAAGAACATT 57.675 36.364 5.01 0.00 34.76 2.71
1869 2025 7.801315 CGATTGATTTTTCGAAAAGGAAGTACA 59.199 33.333 21.53 12.55 37.55 2.90
1870 2026 7.201240 GCGATTGATTTTTCGAAAAGGAAGTAC 60.201 37.037 21.53 11.69 37.55 2.73
1871 2027 6.799925 GCGATTGATTTTTCGAAAAGGAAGTA 59.200 34.615 21.53 8.03 37.55 2.24
1872 2028 5.629435 GCGATTGATTTTTCGAAAAGGAAGT 59.371 36.000 21.53 10.63 37.55 3.01
1873 2029 5.858581 AGCGATTGATTTTTCGAAAAGGAAG 59.141 36.000 21.53 12.31 37.55 3.46
1874 2030 5.768317 AGCGATTGATTTTTCGAAAAGGAA 58.232 33.333 21.53 15.67 37.55 3.36
1876 2032 6.249260 CACTAGCGATTGATTTTTCGAAAAGG 59.751 38.462 21.53 8.83 37.55 3.11
1989 2145 7.700234 GCCACGATAATGAGAATGAGATACTAG 59.300 40.741 0.00 0.00 0.00 2.57
1994 2150 5.480642 AGCCACGATAATGAGAATGAGAT 57.519 39.130 0.00 0.00 0.00 2.75
2059 2217 0.390472 GAACCGACTCTGAAGCCTGG 60.390 60.000 0.00 0.00 0.00 4.45
2324 2769 2.414559 CCTGCAAAGCCTGAATACAACG 60.415 50.000 0.00 0.00 0.00 4.10
2329 2774 2.220653 AAGCCTGCAAAGCCTGAATA 57.779 45.000 4.82 0.00 0.00 1.75
2345 2790 4.639310 ACACATCTTGATGATCTGGAAAGC 59.361 41.667 16.43 0.00 32.05 3.51
2346 2791 6.754702 AACACATCTTGATGATCTGGAAAG 57.245 37.500 16.43 0.00 32.05 2.62
2347 2792 6.944290 AGAAACACATCTTGATGATCTGGAAA 59.056 34.615 16.43 0.00 32.05 3.13
2348 2793 6.479006 AGAAACACATCTTGATGATCTGGAA 58.521 36.000 16.43 0.00 32.05 3.53
2349 2794 6.058553 AGAAACACATCTTGATGATCTGGA 57.941 37.500 16.43 0.00 32.05 3.86
2350 2795 6.754702 AAGAAACACATCTTGATGATCTGG 57.245 37.500 16.43 4.27 38.22 3.86
2532 2982 2.355197 CCTGTTATGTTGACATCGGCA 58.645 47.619 0.00 0.00 37.76 5.69
2556 3006 3.736126 GCATGAGCATTTCTTTGCCTACC 60.736 47.826 0.00 0.00 43.83 3.18
2568 3018 2.025037 TGGGTCTTTAGGCATGAGCATT 60.025 45.455 0.00 0.00 44.61 3.56
2639 3089 6.845758 ATCAGTTTGTGATGGATGAATTGT 57.154 33.333 0.00 0.00 44.82 2.71
2680 3130 2.462889 CTGCAAGCAAACGACAACATT 58.537 42.857 0.00 0.00 0.00 2.71
2727 3177 3.009033 TCTTCCACAAGAATGACCGGAAT 59.991 43.478 9.46 0.00 35.57 3.01
2757 3207 8.645814 TTACCTTGTAGTCTTCATACTTCTCA 57.354 34.615 0.00 0.00 0.00 3.27
2798 3250 6.057533 CAGGGAATAGCAGACAAACATCATA 58.942 40.000 0.00 0.00 0.00 2.15
2816 3268 1.554992 TACCAGGTGGGACAGGGAA 59.445 57.895 0.76 0.00 41.80 3.97
2873 3328 5.018809 AGCACAAGGGATTCACACATTAAT 58.981 37.500 0.00 0.00 0.00 1.40
2917 3372 1.539869 TCCCAAGAAGAGCCAGGCT 60.540 57.895 16.12 16.12 43.88 4.58
3228 3698 5.991606 CACATAGGTGTTGTCTTTCTTCAGA 59.008 40.000 0.00 0.00 40.24 3.27
3373 3870 3.425359 CCATTCGCACTAAACTGCTCAAG 60.425 47.826 0.00 0.00 34.77 3.02
3375 3872 2.076100 CCATTCGCACTAAACTGCTCA 58.924 47.619 0.00 0.00 34.77 4.26
3376 3873 1.202076 GCCATTCGCACTAAACTGCTC 60.202 52.381 0.00 0.00 37.47 4.26
3378 3875 0.521242 CGCCATTCGCACTAAACTGC 60.521 55.000 0.00 0.00 37.30 4.40
3379 3876 3.586039 CGCCATTCGCACTAAACTG 57.414 52.632 0.00 0.00 37.30 3.16
3389 3886 0.641783 GCAAAATTCAGCGCCATTCG 59.358 50.000 2.29 0.00 42.12 3.34
3416 3923 0.952280 GTCGATCCCTAGCATCGTCA 59.048 55.000 17.23 2.38 43.07 4.35
3418 3925 0.955178 CAGTCGATCCCTAGCATCGT 59.045 55.000 17.23 2.38 43.07 3.73
3419 3926 0.242286 CCAGTCGATCCCTAGCATCG 59.758 60.000 13.51 13.51 43.77 3.84
3444 3951 4.636249 ACTTCTTCAGTTGCTTCCTGTAG 58.364 43.478 0.00 0.00 27.32 2.74
3499 4006 4.147321 AGTGCCAAGAATGAGAAACACAT 58.853 39.130 0.00 0.00 0.00 3.21
3505 4012 4.889409 ACAAGAAAGTGCCAAGAATGAGAA 59.111 37.500 0.00 0.00 0.00 2.87
3507 4014 4.543692 CACAAGAAAGTGCCAAGAATGAG 58.456 43.478 0.00 0.00 32.04 2.90
3629 4138 7.703058 ATAGTTGGGAGTTGAAATAAACCAG 57.297 36.000 0.00 0.00 0.00 4.00
3650 4159 7.668052 GCAGAGGGGATAGTAGTGGATATATAG 59.332 44.444 0.00 0.00 0.00 1.31
3658 4167 2.390225 AGCAGAGGGGATAGTAGTGG 57.610 55.000 0.00 0.00 0.00 4.00
3682 4191 7.581213 ATTTGAGTGAAATACTGTTGGTGAA 57.419 32.000 0.00 0.00 40.53 3.18
3683 4192 8.684386 TTATTTGAGTGAAATACTGTTGGTGA 57.316 30.769 0.00 0.00 40.53 4.02
3684 4193 9.345517 CATTATTTGAGTGAAATACTGTTGGTG 57.654 33.333 4.84 0.00 40.53 4.17
3726 4238 8.524870 AATTAACTGCAAATTTGTAAGAGCTG 57.475 30.769 22.21 13.00 0.00 4.24
3801 4313 5.148568 GTCGCCACGTTTTGTATGTTTTAT 58.851 37.500 0.00 0.00 0.00 1.40
3802 4314 4.034858 TGTCGCCACGTTTTGTATGTTTTA 59.965 37.500 0.00 0.00 0.00 1.52
3803 4315 3.181499 TGTCGCCACGTTTTGTATGTTTT 60.181 39.130 0.00 0.00 0.00 2.43
3804 4316 2.355132 TGTCGCCACGTTTTGTATGTTT 59.645 40.909 0.00 0.00 0.00 2.83
3805 4317 1.941294 TGTCGCCACGTTTTGTATGTT 59.059 42.857 0.00 0.00 0.00 2.71
3806 4318 1.584175 TGTCGCCACGTTTTGTATGT 58.416 45.000 0.00 0.00 0.00 2.29
3807 4319 2.415168 AGATGTCGCCACGTTTTGTATG 59.585 45.455 0.00 0.00 0.00 2.39
3893 4406 2.989840 GTTCTGATCCAGACAACACTCG 59.010 50.000 0.00 0.00 40.46 4.18
3928 4441 1.016130 GGGCACTGTCAGTCATGTCG 61.016 60.000 1.37 0.00 0.00 4.35
3974 4487 1.442769 CCCATGTTCTTGTGAGACCG 58.557 55.000 0.00 0.00 0.00 4.79
4060 4592 1.000771 GGGAAAACAGAGGAGCCCC 60.001 63.158 0.00 0.00 0.00 5.80
4080 4612 0.917533 ATGCAGCCCTGACTGAAGAT 59.082 50.000 0.00 0.00 40.25 2.40
4085 4617 1.451567 CCAGATGCAGCCCTGACTG 60.452 63.158 12.16 5.32 40.80 3.51
4103 4644 0.740737 AGCAACAACAGGTGCAAGTC 59.259 50.000 8.33 0.00 0.00 3.01
4106 4647 0.894141 AACAGCAACAACAGGTGCAA 59.106 45.000 8.33 0.00 37.99 4.08
4121 4662 2.643272 CAGCACCAGCAGCAACAG 59.357 61.111 0.00 0.00 45.49 3.16
4127 4668 4.039357 GCAGTGCAGCACCAGCAG 62.039 66.667 27.14 13.25 43.63 4.24
4130 4671 2.643272 CAAGCAGTGCAGCACCAG 59.357 61.111 22.41 15.87 34.49 4.00
4143 4684 2.733593 GCAGCAACAGCAGCAAGC 60.734 61.111 0.00 0.00 40.13 4.01
4163 4707 4.219070 CCAAAAATTGCAGAGGATGACAGA 59.781 41.667 0.00 0.00 0.00 3.41
4164 4708 4.219070 TCCAAAAATTGCAGAGGATGACAG 59.781 41.667 0.00 0.00 0.00 3.51
4180 4724 1.466025 CCTGCAGCAGCCTCCAAAAA 61.466 55.000 17.81 0.00 41.13 1.94
4295 4839 1.531883 CGCATGATTGACTCGACTCGA 60.532 52.381 0.00 0.29 0.00 4.04
4298 4842 1.633561 CACGCATGATTGACTCGACT 58.366 50.000 0.00 0.00 0.00 4.18
4314 4858 0.243907 CCTAGTGTCCACTGTCCACG 59.756 60.000 10.15 0.00 42.52 4.94
4322 4873 1.376037 GCACCTGCCTAGTGTCCAC 60.376 63.158 0.00 0.00 37.56 4.02
4324 4875 0.745845 CATGCACCTGCCTAGTGTCC 60.746 60.000 0.00 0.00 41.18 4.02
4325 4876 1.372087 GCATGCACCTGCCTAGTGTC 61.372 60.000 14.21 0.00 41.18 3.67
4326 4877 1.377725 GCATGCACCTGCCTAGTGT 60.378 57.895 14.21 0.00 41.18 3.55
4327 4878 0.750546 ATGCATGCACCTGCCTAGTG 60.751 55.000 25.37 0.00 41.58 2.74
4329 4880 0.464916 TCATGCATGCACCTGCCTAG 60.465 55.000 25.37 5.76 41.58 3.02
4331 4882 1.076265 ATCATGCATGCACCTGCCT 60.076 52.632 25.37 2.19 41.58 4.75
4334 4885 1.874231 GAGAGATCATGCATGCACCTG 59.126 52.381 25.37 18.85 0.00 4.00
4335 4886 1.489230 TGAGAGATCATGCATGCACCT 59.511 47.619 25.37 17.18 0.00 4.00
4336 4887 1.874231 CTGAGAGATCATGCATGCACC 59.126 52.381 25.37 12.53 0.00 5.01
4337 4888 2.288186 CACTGAGAGATCATGCATGCAC 59.712 50.000 25.37 16.69 0.00 4.57
4339 4890 2.544686 GACACTGAGAGATCATGCATGC 59.455 50.000 22.25 11.82 0.00 4.06
4340 4891 3.804873 CAGACACTGAGAGATCATGCATG 59.195 47.826 21.07 21.07 32.44 4.06
4346 4906 4.026356 TCAGACAGACACTGAGAGATCA 57.974 45.455 5.76 0.00 39.10 2.92
4357 4917 5.536260 CAGATTCAGAGTTTCAGACAGACA 58.464 41.667 0.00 0.00 0.00 3.41
4358 4918 4.388469 GCAGATTCAGAGTTTCAGACAGAC 59.612 45.833 0.00 0.00 0.00 3.51
4359 4919 4.039609 TGCAGATTCAGAGTTTCAGACAGA 59.960 41.667 0.00 0.00 0.00 3.41
4360 4920 4.313282 TGCAGATTCAGAGTTTCAGACAG 58.687 43.478 0.00 0.00 0.00 3.51
4381 4941 1.092348 CAGCACCACACCTGATCATG 58.908 55.000 0.00 0.00 0.00 3.07
4385 4945 1.073722 CACCAGCACCACACCTGAT 59.926 57.895 0.00 0.00 0.00 2.90
4386 4946 2.510411 CACCAGCACCACACCTGA 59.490 61.111 0.00 0.00 0.00 3.86
4388 4948 1.719063 ATTCCACCAGCACCACACCT 61.719 55.000 0.00 0.00 0.00 4.00
4389 4949 1.228552 ATTCCACCAGCACCACACC 60.229 57.895 0.00 0.00 0.00 4.16
4390 4950 1.526575 CCATTCCACCAGCACCACAC 61.527 60.000 0.00 0.00 0.00 3.82
4391 4951 1.228521 CCATTCCACCAGCACCACA 60.229 57.895 0.00 0.00 0.00 4.17
4392 4952 1.228552 ACCATTCCACCAGCACCAC 60.229 57.895 0.00 0.00 0.00 4.16
4400 4961 0.673644 CGACACCTCACCATTCCACC 60.674 60.000 0.00 0.00 0.00 4.61
4418 4979 2.135664 CCTCGGAAGGTAATACTGCG 57.864 55.000 0.00 0.00 37.94 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.