Multiple sequence alignment - TraesCS7A01G019300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G019300 chr7A 100.000 2620 0 0 1 2620 7935905 7933286 0.000000e+00 4839.0
1 TraesCS7A01G019300 chr7A 82.024 662 76 23 985 1622 546539608 546538966 8.310000e-145 523.0
2 TraesCS7A01G019300 chr7A 81.571 662 78 21 985 1622 126760888 126760247 8.370000e-140 507.0
3 TraesCS7A01G019300 chr7A 90.476 84 8 0 2289 2372 7933566 7933483 7.670000e-21 111.0
4 TraesCS7A01G019300 chr7A 90.476 84 8 0 2340 2423 7933617 7933534 7.670000e-21 111.0
5 TraesCS7A01G019300 chr7A 94.872 39 2 0 348 386 240189350 240189312 7.830000e-06 62.1
6 TraesCS7A01G019300 chr7A 92.105 38 3 0 910 947 126760997 126760960 1.000000e-03 54.7
7 TraesCS7A01G019300 chrUn 92.080 1894 119 19 655 2532 51329503 51327625 0.000000e+00 2638.0
8 TraesCS7A01G019300 chrUn 91.909 1545 100 10 681 2201 51194083 51195626 0.000000e+00 2137.0
9 TraesCS7A01G019300 chrUn 89.223 631 46 11 655 1274 51192257 51192876 0.000000e+00 769.0
10 TraesCS7A01G019300 chrUn 81.203 266 28 9 985 1228 30903695 30903430 7.400000e-46 195.0
11 TraesCS7A01G019300 chrUn 96.117 103 3 1 2519 2620 51315231 51315129 1.610000e-37 167.0
12 TraesCS7A01G019300 chrUn 90.000 90 9 0 2340 2429 51327868 51327779 1.650000e-22 117.0
13 TraesCS7A01G019300 chrUn 86.667 90 12 0 2289 2378 51327817 51327728 1.660000e-17 100.0
14 TraesCS7A01G019300 chr7D 92.673 737 44 6 657 1383 7170587 7169851 0.000000e+00 1053.0
15 TraesCS7A01G019300 chr7D 86.564 521 63 7 1313 1831 552899326 552898811 3.780000e-158 568.0
16 TraesCS7A01G019300 chr7D 93.353 346 17 3 1377 1718 7161250 7160907 8.370000e-140 507.0
17 TraesCS7A01G019300 chr7D 77.249 567 79 26 46 582 7081904 7081358 1.190000e-73 287.0
18 TraesCS7A01G019300 chr7D 76.755 413 46 29 2127 2529 552507780 552507408 4.450000e-43 185.0
19 TraesCS7A01G019300 chr7D 92.308 117 9 0 682 798 7082107 7082223 1.610000e-37 167.0
20 TraesCS7A01G019300 chr2D 82.421 1206 159 22 679 1838 351957741 351958939 0.000000e+00 1003.0
21 TraesCS7A01G019300 chr2D 81.863 805 94 24 985 1759 625375018 625375800 4.760000e-177 630.0
22 TraesCS7A01G019300 chr2D 80.694 663 84 19 1885 2536 351959053 351959682 2.360000e-130 475.0
23 TraesCS7A01G019300 chr2D 80.247 81 16 0 906 986 625374921 625375001 7.830000e-06 62.1
24 TraesCS7A01G019300 chr2B 85.946 740 92 9 1103 1838 697543479 697542748 0.000000e+00 780.0
25 TraesCS7A01G019300 chr2B 82.278 237 35 4 2018 2250 529838811 529838578 5.720000e-47 198.0
26 TraesCS7A01G019300 chr2B 82.278 237 35 4 2018 2250 563848723 563848490 5.720000e-47 198.0
27 TraesCS7A01G019300 chr2B 89.535 86 7 2 2532 2617 697522691 697522608 9.920000e-20 108.0
28 TraesCS7A01G019300 chr2B 97.917 48 1 0 1843 1890 697542720 697542673 1.670000e-12 84.2
29 TraesCS7A01G019300 chr2B 92.683 41 3 0 345 385 763490823 763490783 2.820000e-05 60.2
30 TraesCS7A01G019300 chr1D 82.099 810 92 30 985 1763 460799976 460799189 0.000000e+00 643.0
31 TraesCS7A01G019300 chr1D 81.864 794 91 28 992 1759 442321302 442320536 1.030000e-173 619.0
32 TraesCS7A01G019300 chr1D 81.864 794 91 28 992 1759 479816428 479817194 1.030000e-173 619.0
33 TraesCS7A01G019300 chr6B 83.085 739 74 16 985 1702 515039685 515040393 2.210000e-175 625.0
34 TraesCS7A01G019300 chr6B 97.059 34 1 0 1700 1733 515040441 515040474 1.010000e-04 58.4
35 TraesCS7A01G019300 chr6B 97.059 34 1 0 1700 1733 558651628 558651595 1.010000e-04 58.4
36 TraesCS7A01G019300 chr4D 81.841 793 92 27 992 1759 374746621 374747386 1.030000e-173 619.0
37 TraesCS7A01G019300 chr4D 94.737 38 1 1 348 385 508276191 508276227 1.010000e-04 58.4
38 TraesCS7A01G019300 chr3D 81.514 806 95 24 985 1759 600645321 600644539 4.790000e-172 614.0
39 TraesCS7A01G019300 chr3D 91.667 60 4 1 1700 1759 545928357 545928299 6.010000e-12 82.4
40 TraesCS7A01G019300 chr6A 81.139 790 97 29 1000 1759 36379948 36380715 1.040000e-163 586.0
41 TraesCS7A01G019300 chr5D 83.460 659 69 20 1000 1635 486008202 486008843 6.290000e-161 577.0
42 TraesCS7A01G019300 chr5D 81.818 77 14 0 910 986 486008091 486008167 6.050000e-07 65.8
43 TraesCS7A01G019300 chr4B 79.385 878 118 38 913 1759 473577551 473578396 6.330000e-156 560.0
44 TraesCS7A01G019300 chr4B 81.857 237 36 4 2018 2250 233239910 233239677 2.660000e-45 193.0
45 TraesCS7A01G019300 chr4B 81.857 237 36 4 2018 2250 498175081 498174848 2.660000e-45 193.0
46 TraesCS7A01G019300 chr1A 81.559 667 74 27 1000 1642 521284922 521285563 3.010000e-139 505.0
47 TraesCS7A01G019300 chr5A 84.950 505 59 12 1264 1759 214946626 214947122 1.810000e-136 496.0
48 TraesCS7A01G019300 chr3B 82.500 240 29 7 2018 2250 540734863 540735096 5.720000e-47 198.0
49 TraesCS7A01G019300 chr1B 82.278 237 35 4 2018 2250 392743094 392743327 5.720000e-47 198.0
50 TraesCS7A01G019300 chr1B 92.683 41 3 0 345 385 13561932 13561892 2.820000e-05 60.2
51 TraesCS7A01G019300 chr1B 92.683 41 3 0 345 385 384239375 384239335 2.820000e-05 60.2
52 TraesCS7A01G019300 chr1B 97.059 34 1 0 1700 1733 453429547 453429514 1.010000e-04 58.4
53 TraesCS7A01G019300 chr3A 92.683 41 3 0 345 385 725928912 725928872 2.820000e-05 60.2
54 TraesCS7A01G019300 chr2A 92.683 41 3 0 345 385 114671936 114671976 2.820000e-05 60.2
55 TraesCS7A01G019300 chr2A 92.683 41 3 0 345 385 751766022 751766062 2.820000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G019300 chr7A 7933286 7935905 2619 True 1687.000000 4839 93.650667 1 2620 3 chr7A.!!$R3 2619
1 TraesCS7A01G019300 chr7A 546538966 546539608 642 True 523.000000 523 82.024000 985 1622 1 chr7A.!!$R2 637
2 TraesCS7A01G019300 chr7A 126760247 126760997 750 True 280.850000 507 86.838000 910 1622 2 chr7A.!!$R4 712
3 TraesCS7A01G019300 chrUn 51192257 51195626 3369 False 1453.000000 2137 90.566000 655 2201 2 chrUn.!!$F1 1546
4 TraesCS7A01G019300 chrUn 51327625 51329503 1878 True 951.666667 2638 89.582333 655 2532 3 chrUn.!!$R3 1877
5 TraesCS7A01G019300 chr7D 7169851 7170587 736 True 1053.000000 1053 92.673000 657 1383 1 chr7D.!!$R3 726
6 TraesCS7A01G019300 chr7D 552898811 552899326 515 True 568.000000 568 86.564000 1313 1831 1 chr7D.!!$R5 518
7 TraesCS7A01G019300 chr7D 7081358 7081904 546 True 287.000000 287 77.249000 46 582 1 chr7D.!!$R1 536
8 TraesCS7A01G019300 chr2D 351957741 351959682 1941 False 739.000000 1003 81.557500 679 2536 2 chr2D.!!$F1 1857
9 TraesCS7A01G019300 chr2D 625374921 625375800 879 False 346.050000 630 81.055000 906 1759 2 chr2D.!!$F2 853
10 TraesCS7A01G019300 chr2B 697542673 697543479 806 True 432.100000 780 91.931500 1103 1890 2 chr2B.!!$R5 787
11 TraesCS7A01G019300 chr1D 460799189 460799976 787 True 643.000000 643 82.099000 985 1763 1 chr1D.!!$R2 778
12 TraesCS7A01G019300 chr1D 442320536 442321302 766 True 619.000000 619 81.864000 992 1759 1 chr1D.!!$R1 767
13 TraesCS7A01G019300 chr1D 479816428 479817194 766 False 619.000000 619 81.864000 992 1759 1 chr1D.!!$F1 767
14 TraesCS7A01G019300 chr6B 515039685 515040474 789 False 341.700000 625 90.072000 985 1733 2 chr6B.!!$F1 748
15 TraesCS7A01G019300 chr4D 374746621 374747386 765 False 619.000000 619 81.841000 992 1759 1 chr4D.!!$F1 767
16 TraesCS7A01G019300 chr3D 600644539 600645321 782 True 614.000000 614 81.514000 985 1759 1 chr3D.!!$R2 774
17 TraesCS7A01G019300 chr6A 36379948 36380715 767 False 586.000000 586 81.139000 1000 1759 1 chr6A.!!$F1 759
18 TraesCS7A01G019300 chr5D 486008091 486008843 752 False 321.400000 577 82.639000 910 1635 2 chr5D.!!$F1 725
19 TraesCS7A01G019300 chr4B 473577551 473578396 845 False 560.000000 560 79.385000 913 1759 1 chr4B.!!$F1 846
20 TraesCS7A01G019300 chr1A 521284922 521285563 641 False 505.000000 505 81.559000 1000 1642 1 chr1A.!!$F1 642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 305 0.036010 CGATGGTGGTGGAAGAAGCT 60.036 55.0 0.0 0.0 0.0 3.74 F
578 581 0.036388 CTACGGGTGTGATGTTGCCT 60.036 55.0 0.0 0.0 0.0 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1418 3382 1.272781 GACCTTCAGATCGAGCAACG 58.727 55.000 2.38 0.0 44.09 4.10 R
2364 4474 1.623811 TCACAACCAGCTCCTAGAACC 59.376 52.381 0.00 0.0 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.935741 TTGCTGTTTCTCTAGCTTAAAACA 57.064 33.333 0.00 3.60 40.52 2.83
26 27 7.510549 TTGCTGTTTCTCTAGCTTAAAACAT 57.489 32.000 12.85 0.00 39.92 2.71
27 28 8.615878 TTGCTGTTTCTCTAGCTTAAAACATA 57.384 30.769 12.85 6.24 39.92 2.29
28 29 8.792830 TGCTGTTTCTCTAGCTTAAAACATAT 57.207 30.769 12.85 0.00 39.92 1.78
29 30 8.883731 TGCTGTTTCTCTAGCTTAAAACATATC 58.116 33.333 12.85 8.32 39.92 1.63
30 31 8.883731 GCTGTTTCTCTAGCTTAAAACATATCA 58.116 33.333 12.85 0.00 39.92 2.15
36 37 9.944376 TCTCTAGCTTAAAACATATCAAACAGT 57.056 29.630 0.00 0.00 0.00 3.55
41 42 9.502091 AGCTTAAAACATATCAAACAGTACAGA 57.498 29.630 0.00 0.00 0.00 3.41
42 43 9.543018 GCTTAAAACATATCAAACAGTACAGAC 57.457 33.333 0.00 0.00 0.00 3.51
43 44 9.741168 CTTAAAACATATCAAACAGTACAGACG 57.259 33.333 0.00 0.00 0.00 4.18
44 45 6.721571 AAACATATCAAACAGTACAGACGG 57.278 37.500 0.00 0.00 0.00 4.79
45 46 5.654603 ACATATCAAACAGTACAGACGGA 57.345 39.130 0.00 0.00 0.00 4.69
46 47 6.032956 ACATATCAAACAGTACAGACGGAA 57.967 37.500 0.00 0.00 0.00 4.30
47 48 6.100004 ACATATCAAACAGTACAGACGGAAG 58.900 40.000 0.00 0.00 0.00 3.46
48 49 2.750948 TCAAACAGTACAGACGGAAGC 58.249 47.619 0.00 0.00 0.00 3.86
52 53 4.530710 AACAGTACAGACGGAAGCATAA 57.469 40.909 0.00 0.00 0.00 1.90
68 69 6.482308 GGAAGCATAATTAACCGTACATCACT 59.518 38.462 0.00 0.00 0.00 3.41
74 75 2.060326 AACCGTACATCACTGTGTCG 57.940 50.000 7.79 2.86 36.79 4.35
82 83 1.655597 CATCACTGTGTCGGTCAATCG 59.344 52.381 7.79 0.00 0.00 3.34
88 89 3.001939 ACTGTGTCGGTCAATCGAAAAAC 59.998 43.478 0.00 0.00 41.05 2.43
89 90 2.937149 TGTGTCGGTCAATCGAAAAACA 59.063 40.909 0.00 0.00 41.05 2.83
100 102 7.746475 GGTCAATCGAAAAACAAGATTAGTCAG 59.254 37.037 0.00 0.00 33.75 3.51
108 110 9.788960 GAAAAACAAGATTAGTCAGTGAAAACT 57.211 29.630 0.00 0.00 0.00 2.66
160 163 3.019418 GGGACCTAACCCCCACCC 61.019 72.222 0.00 0.00 43.81 4.61
161 164 3.405318 GGACCTAACCCCCACCCG 61.405 72.222 0.00 0.00 0.00 5.28
162 165 4.105553 GACCTAACCCCCACCCGC 62.106 72.222 0.00 0.00 0.00 6.13
163 166 4.669773 ACCTAACCCCCACCCGCT 62.670 66.667 0.00 0.00 0.00 5.52
164 167 4.109675 CCTAACCCCCACCCGCTG 62.110 72.222 0.00 0.00 0.00 5.18
165 168 4.796495 CTAACCCCCACCCGCTGC 62.796 72.222 0.00 0.00 0.00 5.25
172 175 4.785453 CCACCCGCTGCTTCCCTC 62.785 72.222 0.00 0.00 0.00 4.30
198 201 2.248724 CGTCGAGGGTCGCTATCG 59.751 66.667 0.00 0.00 40.21 2.92
200 203 1.890979 GTCGAGGGTCGCTATCGGA 60.891 63.158 0.00 0.00 40.21 4.55
201 204 1.072678 TCGAGGGTCGCTATCGGAT 59.927 57.895 0.00 0.00 40.21 4.18
204 207 0.959553 GAGGGTCGCTATCGGATGAA 59.040 55.000 0.00 0.00 36.13 2.57
205 208 0.962489 AGGGTCGCTATCGGATGAAG 59.038 55.000 0.00 0.00 36.13 3.02
206 209 0.667792 GGGTCGCTATCGGATGAAGC 60.668 60.000 0.00 1.64 36.13 3.86
207 210 0.667792 GGTCGCTATCGGATGAAGCC 60.668 60.000 0.00 0.00 36.13 4.35
208 211 0.667792 GTCGCTATCGGATGAAGCCC 60.668 60.000 0.00 0.00 36.13 5.19
210 213 1.374758 GCTATCGGATGAAGCCCGG 60.375 63.158 0.00 0.00 46.47 5.73
211 214 1.816863 GCTATCGGATGAAGCCCGGA 61.817 60.000 0.73 0.00 46.47 5.14
212 215 0.038159 CTATCGGATGAAGCCCGGAC 60.038 60.000 0.73 0.00 46.47 4.79
213 216 0.757561 TATCGGATGAAGCCCGGACA 60.758 55.000 0.73 0.00 46.47 4.02
214 217 2.032860 ATCGGATGAAGCCCGGACAG 62.033 60.000 0.73 0.00 46.47 3.51
215 218 2.990479 GGATGAAGCCCGGACAGT 59.010 61.111 0.73 0.00 0.00 3.55
216 219 1.450312 GGATGAAGCCCGGACAGTG 60.450 63.158 0.73 0.00 0.00 3.66
217 220 1.596934 GATGAAGCCCGGACAGTGA 59.403 57.895 0.73 0.00 0.00 3.41
218 221 0.741221 GATGAAGCCCGGACAGTGAC 60.741 60.000 0.73 0.00 0.00 3.67
219 222 2.432628 GAAGCCCGGACAGTGACG 60.433 66.667 0.73 0.55 0.00 4.35
229 232 4.435436 CAGTGACGGCAGCGGCTA 62.435 66.667 9.17 0.00 40.87 3.93
230 233 4.135153 AGTGACGGCAGCGGCTAG 62.135 66.667 9.17 6.06 40.87 3.42
231 234 4.129737 GTGACGGCAGCGGCTAGA 62.130 66.667 9.17 0.00 40.87 2.43
232 235 4.129737 TGACGGCAGCGGCTAGAC 62.130 66.667 9.17 4.74 40.87 2.59
233 236 4.874977 GACGGCAGCGGCTAGACC 62.875 72.222 9.17 3.87 40.87 3.85
235 238 4.577246 CGGCAGCGGCTAGACCTC 62.577 72.222 9.17 0.00 40.87 3.85
236 239 4.228567 GGCAGCGGCTAGACCTCC 62.229 72.222 9.17 0.00 40.87 4.30
237 240 4.228567 GCAGCGGCTAGACCTCCC 62.229 72.222 0.26 0.00 36.96 4.30
238 241 3.541713 CAGCGGCTAGACCTCCCC 61.542 72.222 0.26 0.00 35.61 4.81
239 242 3.756783 AGCGGCTAGACCTCCCCT 61.757 66.667 0.00 0.00 35.61 4.79
240 243 3.228017 GCGGCTAGACCTCCCCTC 61.228 72.222 0.00 0.00 35.61 4.30
241 244 2.907917 CGGCTAGACCTCCCCTCG 60.908 72.222 0.00 0.00 35.61 4.63
242 245 2.601868 GGCTAGACCTCCCCTCGA 59.398 66.667 0.00 0.00 34.51 4.04
243 246 1.154221 GGCTAGACCTCCCCTCGAT 59.846 63.158 0.00 0.00 34.51 3.59
244 247 1.182385 GGCTAGACCTCCCCTCGATG 61.182 65.000 0.00 0.00 34.51 3.84
245 248 1.811645 GCTAGACCTCCCCTCGATGC 61.812 65.000 0.00 0.00 0.00 3.91
246 249 1.519751 CTAGACCTCCCCTCGATGCG 61.520 65.000 0.00 0.00 0.00 4.73
247 250 2.978298 TAGACCTCCCCTCGATGCGG 62.978 65.000 0.00 0.00 0.00 5.69
250 253 3.854669 CTCCCCTCGATGCGGCTT 61.855 66.667 0.00 0.00 0.00 4.35
251 254 3.798954 CTCCCCTCGATGCGGCTTC 62.799 68.421 0.00 3.37 0.00 3.86
252 255 4.918201 CCCCTCGATGCGGCTTCC 62.918 72.222 9.92 0.00 0.00 3.46
253 256 4.918201 CCCTCGATGCGGCTTCCC 62.918 72.222 9.92 0.00 0.00 3.97
254 257 3.854669 CCTCGATGCGGCTTCCCT 61.855 66.667 9.92 0.00 0.00 4.20
255 258 2.279784 CTCGATGCGGCTTCCCTC 60.280 66.667 9.92 0.00 0.00 4.30
256 259 2.759973 TCGATGCGGCTTCCCTCT 60.760 61.111 9.92 0.00 0.00 3.69
257 260 2.279784 CGATGCGGCTTCCCTCTC 60.280 66.667 9.92 0.00 0.00 3.20
258 261 2.110006 GATGCGGCTTCCCTCTCC 59.890 66.667 0.00 0.00 0.00 3.71
259 262 2.688666 ATGCGGCTTCCCTCTCCA 60.689 61.111 0.00 0.00 0.00 3.86
260 263 2.049627 GATGCGGCTTCCCTCTCCAT 62.050 60.000 0.00 0.00 0.00 3.41
261 264 2.203126 GCGGCTTCCCTCTCCATG 60.203 66.667 0.00 0.00 0.00 3.66
262 265 2.735772 GCGGCTTCCCTCTCCATGA 61.736 63.158 0.00 0.00 0.00 3.07
263 266 2.049627 GCGGCTTCCCTCTCCATGAT 62.050 60.000 0.00 0.00 0.00 2.45
264 267 0.250209 CGGCTTCCCTCTCCATGATG 60.250 60.000 0.00 0.00 0.00 3.07
265 268 1.135094 GGCTTCCCTCTCCATGATGA 58.865 55.000 0.00 0.00 0.00 2.92
266 269 1.704070 GGCTTCCCTCTCCATGATGAT 59.296 52.381 0.00 0.00 0.00 2.45
267 270 2.552591 GGCTTCCCTCTCCATGATGATG 60.553 54.545 0.00 0.00 0.00 3.07
268 271 2.371179 GCTTCCCTCTCCATGATGATGA 59.629 50.000 0.00 0.00 0.00 2.92
269 272 3.806507 GCTTCCCTCTCCATGATGATGAC 60.807 52.174 0.00 0.00 0.00 3.06
270 273 1.966354 TCCCTCTCCATGATGATGACG 59.034 52.381 0.00 0.00 0.00 4.35
271 274 1.607509 CCCTCTCCATGATGATGACGC 60.608 57.143 0.00 0.00 0.00 5.19
272 275 1.343789 CCTCTCCATGATGATGACGCT 59.656 52.381 0.00 0.00 0.00 5.07
273 276 2.405172 CTCTCCATGATGATGACGCTG 58.595 52.381 0.00 0.00 0.00 5.18
274 277 1.758862 TCTCCATGATGATGACGCTGT 59.241 47.619 0.00 0.00 0.00 4.40
275 278 1.865340 CTCCATGATGATGACGCTGTG 59.135 52.381 0.00 0.00 0.00 3.66
276 279 0.942252 CCATGATGATGACGCTGTGG 59.058 55.000 0.00 0.00 0.00 4.17
277 280 1.660167 CATGATGATGACGCTGTGGT 58.340 50.000 0.00 0.00 0.00 4.16
278 281 1.596260 CATGATGATGACGCTGTGGTC 59.404 52.381 0.00 0.00 37.45 4.02
279 282 0.897621 TGATGATGACGCTGTGGTCT 59.102 50.000 0.00 0.00 37.81 3.85
280 283 1.276138 TGATGATGACGCTGTGGTCTT 59.724 47.619 0.00 0.00 37.81 3.01
281 284 1.662629 GATGATGACGCTGTGGTCTTG 59.337 52.381 0.00 0.00 37.81 3.02
282 285 0.320683 TGATGACGCTGTGGTCTTGG 60.321 55.000 0.00 0.00 37.81 3.61
283 286 1.639298 GATGACGCTGTGGTCTTGGC 61.639 60.000 0.00 0.00 37.81 4.52
287 290 3.181367 GCTGTGGTCTTGGCGATG 58.819 61.111 0.00 0.00 0.00 3.84
288 291 2.401766 GCTGTGGTCTTGGCGATGG 61.402 63.158 0.00 0.00 0.00 3.51
289 292 1.003355 CTGTGGTCTTGGCGATGGT 60.003 57.895 0.00 0.00 0.00 3.55
290 293 1.300971 CTGTGGTCTTGGCGATGGTG 61.301 60.000 0.00 0.00 0.00 4.17
291 294 2.040544 GTGGTCTTGGCGATGGTGG 61.041 63.158 0.00 0.00 0.00 4.61
292 295 2.351276 GGTCTTGGCGATGGTGGT 59.649 61.111 0.00 0.00 0.00 4.16
293 296 2.040544 GGTCTTGGCGATGGTGGTG 61.041 63.158 0.00 0.00 0.00 4.17
294 297 2.040544 GTCTTGGCGATGGTGGTGG 61.041 63.158 0.00 0.00 0.00 4.61
295 298 2.220586 TCTTGGCGATGGTGGTGGA 61.221 57.895 0.00 0.00 0.00 4.02
296 299 1.303236 CTTGGCGATGGTGGTGGAA 60.303 57.895 0.00 0.00 0.00 3.53
297 300 1.303236 TTGGCGATGGTGGTGGAAG 60.303 57.895 0.00 0.00 0.00 3.46
298 301 1.773856 TTGGCGATGGTGGTGGAAGA 61.774 55.000 0.00 0.00 0.00 2.87
299 302 1.002624 GGCGATGGTGGTGGAAGAA 60.003 57.895 0.00 0.00 0.00 2.52
300 303 1.026718 GGCGATGGTGGTGGAAGAAG 61.027 60.000 0.00 0.00 0.00 2.85
301 304 1.648467 GCGATGGTGGTGGAAGAAGC 61.648 60.000 0.00 0.00 0.00 3.86
302 305 0.036010 CGATGGTGGTGGAAGAAGCT 60.036 55.000 0.00 0.00 0.00 3.74
303 306 1.207089 CGATGGTGGTGGAAGAAGCTA 59.793 52.381 0.00 0.00 0.00 3.32
304 307 2.158900 CGATGGTGGTGGAAGAAGCTAT 60.159 50.000 0.00 0.00 0.00 2.97
305 308 2.787473 TGGTGGTGGAAGAAGCTATG 57.213 50.000 0.00 0.00 0.00 2.23
306 309 1.340017 TGGTGGTGGAAGAAGCTATGC 60.340 52.381 0.00 0.00 0.00 3.14
307 310 1.065126 GGTGGTGGAAGAAGCTATGCT 60.065 52.381 0.00 0.00 42.56 3.79
308 311 2.284190 GTGGTGGAAGAAGCTATGCTC 58.716 52.381 0.00 0.00 38.25 4.26
309 312 1.134699 TGGTGGAAGAAGCTATGCTCG 60.135 52.381 0.00 0.00 38.25 5.03
310 313 1.576356 GTGGAAGAAGCTATGCTCGG 58.424 55.000 0.00 0.00 38.25 4.63
311 314 1.134670 GTGGAAGAAGCTATGCTCGGT 60.135 52.381 0.00 0.00 38.25 4.69
312 315 1.134699 TGGAAGAAGCTATGCTCGGTG 60.135 52.381 0.00 0.00 38.25 4.94
313 316 1.576356 GAAGAAGCTATGCTCGGTGG 58.424 55.000 0.00 0.00 38.25 4.61
314 317 0.905357 AAGAAGCTATGCTCGGTGGT 59.095 50.000 0.00 0.00 38.25 4.16
315 318 0.905357 AGAAGCTATGCTCGGTGGTT 59.095 50.000 0.00 0.00 38.25 3.67
316 319 1.134670 AGAAGCTATGCTCGGTGGTTC 60.135 52.381 0.00 0.00 38.25 3.62
317 320 0.460284 AAGCTATGCTCGGTGGTTCG 60.460 55.000 0.00 0.00 38.25 3.95
318 321 2.526120 GCTATGCTCGGTGGTTCGC 61.526 63.158 0.00 0.00 0.00 4.70
319 322 1.883084 CTATGCTCGGTGGTTCGCC 60.883 63.158 0.00 0.00 37.92 5.54
320 323 3.379865 TATGCTCGGTGGTTCGCCC 62.380 63.158 0.00 0.00 36.08 6.13
323 326 3.691342 CTCGGTGGTTCGCCCTCA 61.691 66.667 0.00 0.00 36.08 3.86
324 327 3.234630 CTCGGTGGTTCGCCCTCAA 62.235 63.158 0.00 0.00 36.08 3.02
325 328 3.047877 CGGTGGTTCGCCCTCAAC 61.048 66.667 0.00 0.00 36.08 3.18
326 329 3.047877 GGTGGTTCGCCCTCAACG 61.048 66.667 0.00 0.00 36.08 4.10
327 330 3.723348 GTGGTTCGCCCTCAACGC 61.723 66.667 0.00 0.00 36.08 4.84
328 331 4.243008 TGGTTCGCCCTCAACGCA 62.243 61.111 0.00 0.00 36.08 5.24
329 332 3.423154 GGTTCGCCCTCAACGCAG 61.423 66.667 0.00 0.00 0.00 5.18
330 333 4.090057 GTTCGCCCTCAACGCAGC 62.090 66.667 0.00 0.00 0.00 5.25
335 338 4.335647 CCCTCAACGCAGCCACCT 62.336 66.667 0.00 0.00 0.00 4.00
336 339 3.052082 CCTCAACGCAGCCACCTG 61.052 66.667 0.00 0.00 42.13 4.00
337 340 2.281070 CTCAACGCAGCCACCTGT 60.281 61.111 0.00 0.00 41.26 4.00
343 346 3.044305 GCAGCCACCTGTGACGAC 61.044 66.667 0.00 0.00 41.26 4.34
344 347 2.734723 CAGCCACCTGTGACGACG 60.735 66.667 0.00 0.00 34.31 5.12
345 348 4.664677 AGCCACCTGTGACGACGC 62.665 66.667 0.00 0.00 0.00 5.19
351 354 4.778415 CTGTGACGACGCCGGGAG 62.778 72.222 2.18 0.00 40.78 4.30
353 356 4.773117 GTGACGACGCCGGGAGTC 62.773 72.222 19.55 19.55 40.78 3.36
355 358 3.745803 GACGACGCCGGGAGTCTT 61.746 66.667 25.14 18.12 40.78 3.01
356 359 3.680338 GACGACGCCGGGAGTCTTC 62.680 68.421 25.14 21.87 40.78 2.87
357 360 4.493747 CGACGCCGGGAGTCTTCC 62.494 72.222 25.14 3.56 43.23 3.46
358 361 3.069318 GACGCCGGGAGTCTTCCT 61.069 66.667 21.75 0.00 43.49 3.36
363 366 3.003173 CGGGAGTCTTCCTGGGCA 61.003 66.667 0.00 0.00 44.82 5.36
364 367 2.370445 CGGGAGTCTTCCTGGGCAT 61.370 63.158 0.00 0.00 44.82 4.40
365 368 1.915078 CGGGAGTCTTCCTGGGCATT 61.915 60.000 0.00 0.00 44.82 3.56
366 369 0.106967 GGGAGTCTTCCTGGGCATTC 60.107 60.000 0.00 0.00 43.49 2.67
367 370 0.106967 GGAGTCTTCCTGGGCATTCC 60.107 60.000 0.00 0.00 40.58 3.01
368 371 0.620556 GAGTCTTCCTGGGCATTCCA 59.379 55.000 0.00 0.00 44.79 3.53
369 372 1.213926 GAGTCTTCCTGGGCATTCCAT 59.786 52.381 0.00 0.00 46.01 3.41
370 373 1.064166 AGTCTTCCTGGGCATTCCATG 60.064 52.381 0.00 0.00 46.01 3.66
371 374 0.259647 TCTTCCTGGGCATTCCATGG 59.740 55.000 4.97 4.97 46.01 3.66
372 375 0.259647 CTTCCTGGGCATTCCATGGA 59.740 55.000 11.44 11.44 46.01 3.41
373 376 0.709397 TTCCTGGGCATTCCATGGAA 59.291 50.000 28.92 28.92 46.01 3.53
374 377 0.935942 TCCTGGGCATTCCATGGAAT 59.064 50.000 30.64 30.64 46.01 3.01
375 378 2.142756 TCCTGGGCATTCCATGGAATA 58.857 47.619 34.23 20.58 46.01 1.75
376 379 2.158475 TCCTGGGCATTCCATGGAATAC 60.158 50.000 34.23 29.17 46.01 1.89
377 380 2.242043 CTGGGCATTCCATGGAATACC 58.758 52.381 35.45 35.45 46.01 2.73
378 381 1.572895 TGGGCATTCCATGGAATACCA 59.427 47.619 39.78 37.92 45.38 3.25
392 395 6.339587 TGGAATACCAAAGAATTGTTGACC 57.660 37.500 0.00 0.00 43.91 4.02
393 396 5.245075 TGGAATACCAAAGAATTGTTGACCC 59.755 40.000 0.00 0.00 43.91 4.46
394 397 5.245075 GGAATACCAAAGAATTGTTGACCCA 59.755 40.000 0.00 0.00 34.60 4.51
395 398 6.070824 GGAATACCAAAGAATTGTTGACCCAT 60.071 38.462 0.00 0.00 34.60 4.00
396 399 6.933514 ATACCAAAGAATTGTTGACCCATT 57.066 33.333 0.00 0.00 34.60 3.16
397 400 4.959723 ACCAAAGAATTGTTGACCCATTG 58.040 39.130 0.00 0.00 34.60 2.82
398 401 4.202346 ACCAAAGAATTGTTGACCCATTGG 60.202 41.667 0.00 0.00 40.39 3.16
399 402 4.202346 CCAAAGAATTGTTGACCCATTGGT 60.202 41.667 1.20 0.00 40.49 3.67
400 403 5.011533 CCAAAGAATTGTTGACCCATTGGTA 59.988 40.000 1.20 0.00 38.90 3.25
401 404 7.014201 CCAAAGAATTGTTGACCCATTGGTAC 61.014 42.308 1.20 0.00 38.90 3.34
402 405 9.304531 CCAAAGAATTGTTGACCCATTGGTACA 62.305 40.741 1.20 0.00 38.90 2.90
412 415 5.036117 ACCCATTGGTACACTATTGCTAG 57.964 43.478 1.20 0.00 45.45 3.42
413 416 3.815401 CCCATTGGTACACTATTGCTAGC 59.185 47.826 8.10 8.10 39.29 3.42
414 417 4.444876 CCCATTGGTACACTATTGCTAGCT 60.445 45.833 17.23 0.00 39.29 3.32
415 418 5.126067 CCATTGGTACACTATTGCTAGCTT 58.874 41.667 17.23 6.13 39.29 3.74
416 419 5.008019 CCATTGGTACACTATTGCTAGCTTG 59.992 44.000 17.23 7.67 39.29 4.01
417 420 3.531538 TGGTACACTATTGCTAGCTTGC 58.468 45.455 17.23 13.56 0.00 4.01
418 421 3.197766 TGGTACACTATTGCTAGCTTGCT 59.802 43.478 20.64 4.47 0.00 3.91
419 422 3.557595 GGTACACTATTGCTAGCTTGCTG 59.442 47.826 20.64 12.41 0.00 4.41
420 423 3.340814 ACACTATTGCTAGCTTGCTGT 57.659 42.857 20.64 13.03 0.00 4.40
421 424 3.005554 ACACTATTGCTAGCTTGCTGTG 58.994 45.455 20.64 21.62 0.00 3.66
422 425 3.005554 CACTATTGCTAGCTTGCTGTGT 58.994 45.455 20.64 11.19 0.00 3.72
423 426 4.183865 CACTATTGCTAGCTTGCTGTGTA 58.816 43.478 20.64 7.68 0.00 2.90
424 427 4.813161 CACTATTGCTAGCTTGCTGTGTAT 59.187 41.667 20.64 8.94 0.00 2.29
425 428 5.985530 CACTATTGCTAGCTTGCTGTGTATA 59.014 40.000 20.64 9.50 0.00 1.47
426 429 6.648310 CACTATTGCTAGCTTGCTGTGTATAT 59.352 38.462 20.64 5.98 0.00 0.86
427 430 7.172190 CACTATTGCTAGCTTGCTGTGTATATT 59.828 37.037 20.64 3.71 0.00 1.28
428 431 5.739752 TTGCTAGCTTGCTGTGTATATTG 57.260 39.130 20.64 0.00 0.00 1.90
429 432 3.561310 TGCTAGCTTGCTGTGTATATTGC 59.439 43.478 20.64 0.00 0.00 3.56
430 433 3.812053 GCTAGCTTGCTGTGTATATTGCT 59.188 43.478 13.17 0.00 0.00 3.91
431 434 4.991056 GCTAGCTTGCTGTGTATATTGCTA 59.009 41.667 13.17 0.00 0.00 3.49
432 435 5.641209 GCTAGCTTGCTGTGTATATTGCTAT 59.359 40.000 13.17 0.00 32.46 2.97
433 436 6.148480 GCTAGCTTGCTGTGTATATTGCTATT 59.852 38.462 13.17 0.00 32.46 1.73
434 437 6.309712 AGCTTGCTGTGTATATTGCTATTG 57.690 37.500 0.00 0.00 0.00 1.90
435 438 4.913924 GCTTGCTGTGTATATTGCTATTGC 59.086 41.667 0.00 0.00 40.20 3.56
459 462 0.604578 CACAAATGAGTGCCAAGGGG 59.395 55.000 0.00 0.00 32.04 4.79
460 463 0.542702 ACAAATGAGTGCCAAGGGGG 60.543 55.000 0.00 0.00 40.85 5.40
487 490 4.742201 GCTCCGCCGCTGACTGAA 62.742 66.667 0.00 0.00 0.00 3.02
488 491 2.507992 CTCCGCCGCTGACTGAAG 60.508 66.667 0.00 0.00 0.00 3.02
489 492 4.742201 TCCGCCGCTGACTGAAGC 62.742 66.667 0.00 0.00 39.94 3.86
495 498 3.426568 GCTGACTGAAGCGGTGGC 61.427 66.667 0.00 0.00 40.37 5.01
505 508 3.151022 GCGGTGGCTAGGAGCTCT 61.151 66.667 14.64 2.18 41.99 4.09
506 509 3.124686 CGGTGGCTAGGAGCTCTC 58.875 66.667 14.64 3.76 41.99 3.20
507 510 2.840066 CGGTGGCTAGGAGCTCTCG 61.840 68.421 14.64 3.43 41.99 4.04
508 511 1.454111 GGTGGCTAGGAGCTCTCGA 60.454 63.158 14.64 0.00 41.99 4.04
509 512 0.825840 GGTGGCTAGGAGCTCTCGAT 60.826 60.000 14.64 0.10 41.99 3.59
510 513 0.596082 GTGGCTAGGAGCTCTCGATC 59.404 60.000 14.64 0.00 41.99 3.69
511 514 0.538516 TGGCTAGGAGCTCTCGATCC 60.539 60.000 14.64 9.31 46.14 3.36
515 518 3.133946 GGAGCTCTCGATCCACCC 58.866 66.667 14.64 0.00 45.12 4.61
516 519 2.725008 GAGCTCTCGATCCACCCG 59.275 66.667 6.43 0.00 0.00 5.28
517 520 1.824329 GAGCTCTCGATCCACCCGA 60.824 63.158 6.43 0.00 34.61 5.14
518 521 1.152652 AGCTCTCGATCCACCCGAT 60.153 57.895 0.00 0.00 35.35 4.18
519 522 1.175983 AGCTCTCGATCCACCCGATC 61.176 60.000 0.00 0.00 43.58 3.69
520 523 1.175983 GCTCTCGATCCACCCGATCT 61.176 60.000 0.00 0.00 44.66 2.75
521 524 0.595588 CTCTCGATCCACCCGATCTG 59.404 60.000 0.00 0.00 44.66 2.90
522 525 0.823769 TCTCGATCCACCCGATCTGG 60.824 60.000 0.91 0.91 44.66 3.86
523 526 0.823769 CTCGATCCACCCGATCTGGA 60.824 60.000 10.54 7.42 44.66 3.86
526 529 3.880174 ATCCACCCGATCTGGATCT 57.120 52.632 10.54 0.00 43.94 2.75
527 530 1.346062 ATCCACCCGATCTGGATCTG 58.654 55.000 10.54 0.00 43.94 2.90
528 531 1.070445 CCACCCGATCTGGATCTGC 59.930 63.158 10.54 0.00 42.00 4.26
529 532 1.300465 CACCCGATCTGGATCTGCG 60.300 63.158 10.54 0.00 42.00 5.18
530 533 1.758514 ACCCGATCTGGATCTGCGT 60.759 57.895 10.54 0.00 42.00 5.24
531 534 1.330655 ACCCGATCTGGATCTGCGTT 61.331 55.000 10.54 0.00 42.00 4.84
532 535 0.877649 CCCGATCTGGATCTGCGTTG 60.878 60.000 0.00 0.00 42.00 4.10
533 536 0.877649 CCGATCTGGATCTGCGTTGG 60.878 60.000 8.65 0.00 42.00 3.77
534 537 1.493950 CGATCTGGATCTGCGTTGGC 61.494 60.000 8.65 0.00 35.72 4.52
535 538 1.153086 ATCTGGATCTGCGTTGGCC 60.153 57.895 0.00 0.00 38.85 5.36
536 539 2.930385 ATCTGGATCTGCGTTGGCCG 62.930 60.000 0.00 0.00 38.85 6.13
537 540 4.776322 TGGATCTGCGTTGGCCGG 62.776 66.667 0.00 0.00 38.85 6.13
538 541 4.467084 GGATCTGCGTTGGCCGGA 62.467 66.667 5.05 0.00 38.85 5.14
563 566 4.036977 AACACGTGGTTGCCTACG 57.963 55.556 21.57 0.00 45.19 3.51
564 567 1.595929 AACACGTGGTTGCCTACGG 60.596 57.895 21.57 0.00 44.07 4.02
565 568 2.740826 CACGTGGTTGCCTACGGG 60.741 66.667 7.95 0.00 44.07 5.28
566 569 3.236233 ACGTGGTTGCCTACGGGT 61.236 61.111 4.13 0.00 44.07 5.28
567 570 2.740826 CGTGGTTGCCTACGGGTG 60.741 66.667 0.00 0.00 36.71 4.61
568 571 2.428622 GTGGTTGCCTACGGGTGT 59.571 61.111 0.00 0.00 34.45 4.16
569 572 1.964373 GTGGTTGCCTACGGGTGTG 60.964 63.158 0.00 0.00 34.45 3.82
570 573 2.141448 TGGTTGCCTACGGGTGTGA 61.141 57.895 0.00 0.00 34.45 3.58
571 574 1.298667 GGTTGCCTACGGGTGTGAT 59.701 57.895 0.00 0.00 34.45 3.06
572 575 1.024579 GGTTGCCTACGGGTGTGATG 61.025 60.000 0.00 0.00 34.45 3.07
573 576 0.321298 GTTGCCTACGGGTGTGATGT 60.321 55.000 0.00 0.00 34.45 3.06
574 577 0.398696 TTGCCTACGGGTGTGATGTT 59.601 50.000 0.00 0.00 34.45 2.71
575 578 0.321210 TGCCTACGGGTGTGATGTTG 60.321 55.000 0.00 0.00 34.45 3.33
576 579 1.644786 GCCTACGGGTGTGATGTTGC 61.645 60.000 0.00 0.00 34.45 4.17
577 580 1.024579 CCTACGGGTGTGATGTTGCC 61.025 60.000 0.00 0.00 0.00 4.52
578 581 0.036388 CTACGGGTGTGATGTTGCCT 60.036 55.000 0.00 0.00 0.00 4.75
579 582 0.036765 TACGGGTGTGATGTTGCCTC 60.037 55.000 0.00 0.00 0.00 4.70
580 583 2.390599 CGGGTGTGATGTTGCCTCG 61.391 63.158 0.00 0.00 0.00 4.63
581 584 1.302511 GGGTGTGATGTTGCCTCGT 60.303 57.895 0.00 0.00 0.00 4.18
582 585 0.889186 GGGTGTGATGTTGCCTCGTT 60.889 55.000 0.00 0.00 0.00 3.85
583 586 0.238289 GGTGTGATGTTGCCTCGTTG 59.762 55.000 0.00 0.00 0.00 4.10
584 587 0.385974 GTGTGATGTTGCCTCGTTGC 60.386 55.000 0.00 0.00 0.00 4.17
585 588 0.817229 TGTGATGTTGCCTCGTTGCA 60.817 50.000 0.00 0.00 40.07 4.08
586 589 0.110056 GTGATGTTGCCTCGTTGCAG 60.110 55.000 2.22 0.00 43.21 4.41
587 590 1.154150 GATGTTGCCTCGTTGCAGC 60.154 57.895 8.34 8.34 43.21 5.25
589 592 2.050985 GTTGCCTCGTTGCAGCAC 60.051 61.111 0.00 0.00 43.21 4.40
590 593 3.286751 TTGCCTCGTTGCAGCACC 61.287 61.111 0.00 0.00 43.21 5.01
610 613 4.060038 CTGCGGCTTGGGGCTTTG 62.060 66.667 0.00 0.00 41.46 2.77
613 616 4.060038 CGGCTTGGGGCTTTGCTG 62.060 66.667 0.00 0.00 41.46 4.41
614 617 4.383861 GGCTTGGGGCTTTGCTGC 62.384 66.667 0.00 0.00 41.46 5.25
632 635 2.831742 CTGCGGGGCTCATGCAAT 60.832 61.111 4.19 0.00 41.91 3.56
633 636 1.526686 CTGCGGGGCTCATGCAATA 60.527 57.895 4.19 0.00 41.91 1.90
634 637 1.512996 CTGCGGGGCTCATGCAATAG 61.513 60.000 4.19 0.00 41.91 1.73
635 638 2.912624 GCGGGGCTCATGCAATAGC 61.913 63.158 13.73 13.73 41.91 2.97
636 639 1.228063 CGGGGCTCATGCAATAGCT 60.228 57.895 19.48 0.00 42.74 3.32
637 640 1.512996 CGGGGCTCATGCAATAGCTG 61.513 60.000 19.48 9.16 42.74 4.24
895 904 2.614057 GACCAAGTCTTAATGGCATCGG 59.386 50.000 0.00 0.00 40.51 4.18
938 947 2.548707 GGGAACGAAACTAGGGTTCGTT 60.549 50.000 32.14 32.14 43.84 3.85
944 953 2.151049 AACTAGGGTTCGTTCGCGCT 62.151 55.000 5.56 0.00 41.05 5.92
959 973 1.151668 GCGCTGTGTGAAATCAGAGT 58.848 50.000 0.00 0.00 34.80 3.24
1418 3382 1.444383 GCTTAAAGGCGCTGCAACC 60.444 57.895 7.64 0.00 0.00 3.77
1435 3402 0.108615 ACCGTTGCTCGATCTGAAGG 60.109 55.000 3.69 0.00 42.86 3.46
1501 3468 1.668294 CCACGGTTCTGTCTCTGCT 59.332 57.895 0.00 0.00 0.00 4.24
1511 3478 5.358442 GGTTCTGTCTCTGCTAGATCAACTA 59.642 44.000 0.00 0.00 36.36 2.24
1602 3569 3.876274 TTGTGCTTGGTTTAGTTGCAA 57.124 38.095 0.00 0.00 35.34 4.08
1655 3623 4.834534 TGCAGCCAAATCTAATTGCAATT 58.165 34.783 26.72 26.72 38.47 2.32
1998 4108 7.176515 TGCAACATGTAGAAAACCTGATACATT 59.823 33.333 0.00 0.00 36.87 2.71
2016 4126 7.490725 TGATACATTATTGTTTTTGGGCATTCG 59.509 33.333 0.00 0.00 37.28 3.34
2027 4137 2.997980 TGGGCATTCGCAAAAGAGATA 58.002 42.857 0.00 0.00 41.24 1.98
2099 4209 4.532521 AGTACTAGAACTGGCAAGTTGGAT 59.467 41.667 12.33 0.00 46.84 3.41
2211 4321 6.197903 TCCTCTCACTAAAGAAGATGATCCA 58.802 40.000 0.00 0.00 0.00 3.41
2251 4361 3.392616 TCTCTTTCTTGGAGGCTTGAAGT 59.607 43.478 0.00 0.00 0.00 3.01
2295 4405 2.641815 AGAGGCTTGTGGAACTTGAGAT 59.358 45.455 0.00 0.00 38.04 2.75
2321 4431 2.573462 AGCCAGAAGCAATGGTTCTAGA 59.427 45.455 24.72 0.00 46.62 2.43
2326 4436 5.423015 CAGAAGCAATGGTTCTAGAAGCTA 58.577 41.667 29.30 18.65 46.62 3.32
2360 4470 0.978907 TGAGATGCAGAGCCACAAGA 59.021 50.000 0.00 0.00 0.00 3.02
2364 4474 1.467734 GATGCAGAGCCACAAGAACTG 59.532 52.381 0.00 0.00 0.00 3.16
2407 4517 0.392729 AGCTTGAGATGCAGAGCCAC 60.393 55.000 0.00 0.00 33.75 5.01
2424 4534 1.271054 CCACAAGCACTGGTTCTAGCT 60.271 52.381 0.00 0.00 39.37 3.32
2446 4556 1.868469 TGCAGTTTGCTGGCATTTTC 58.132 45.000 2.48 0.00 45.31 2.29
2447 4557 1.150827 GCAGTTTGCTGGCATTTTCC 58.849 50.000 0.00 0.00 42.78 3.13
2459 4571 3.069289 GGCATTTTCCAAGGCAGAAAAG 58.931 45.455 13.18 8.32 44.12 2.27
2530 4650 7.538575 ACTAAAATGACCAAGTAATCATGTGC 58.461 34.615 0.00 0.00 35.71 4.57
2532 4652 5.981088 AATGACCAAGTAATCATGTGCAA 57.019 34.783 0.00 0.00 35.71 4.08
2533 4653 6.534475 AATGACCAAGTAATCATGTGCAAT 57.466 33.333 0.00 0.00 35.71 3.56
2534 4654 5.565592 TGACCAAGTAATCATGTGCAATC 57.434 39.130 0.00 0.00 0.00 2.67
2535 4655 5.008980 TGACCAAGTAATCATGTGCAATCA 58.991 37.500 0.00 0.00 0.00 2.57
2536 4656 5.653330 TGACCAAGTAATCATGTGCAATCAT 59.347 36.000 0.00 0.00 0.00 2.45
2537 4657 5.898174 ACCAAGTAATCATGTGCAATCATG 58.102 37.500 10.31 10.31 44.36 3.07
2538 4658 5.419788 ACCAAGTAATCATGTGCAATCATGT 59.580 36.000 14.84 2.47 43.70 3.21
2539 4659 6.602803 ACCAAGTAATCATGTGCAATCATGTA 59.397 34.615 14.84 5.07 43.70 2.29
2540 4660 7.122501 ACCAAGTAATCATGTGCAATCATGTAA 59.877 33.333 14.84 0.41 43.70 2.41
2541 4661 7.975058 CCAAGTAATCATGTGCAATCATGTAAA 59.025 33.333 14.84 0.00 43.70 2.01
2542 4662 9.356433 CAAGTAATCATGTGCAATCATGTAAAA 57.644 29.630 14.84 0.00 43.70 1.52
2548 4668 8.874744 TCATGTGCAATCATGTAAAATTATGG 57.125 30.769 14.84 0.00 43.70 2.74
2549 4669 8.693625 TCATGTGCAATCATGTAAAATTATGGA 58.306 29.630 14.84 0.00 43.70 3.41
2550 4670 9.315525 CATGTGCAATCATGTAAAATTATGGAA 57.684 29.630 8.73 0.00 39.93 3.53
2554 4674 9.979578 TGCAATCATGTAAAATTATGGAATACC 57.020 29.630 0.00 0.00 0.00 2.73
2562 4682 9.747898 TGTAAAATTATGGAATACCTCAGTTGT 57.252 29.630 0.00 0.00 37.04 3.32
2564 4684 6.699575 AATTATGGAATACCTCAGTTGTGC 57.300 37.500 0.00 0.00 37.04 4.57
2565 4685 5.435686 TTATGGAATACCTCAGTTGTGCT 57.564 39.130 0.00 0.00 37.04 4.40
2566 4686 3.334583 TGGAATACCTCAGTTGTGCTC 57.665 47.619 0.00 0.00 37.04 4.26
2567 4687 2.906389 TGGAATACCTCAGTTGTGCTCT 59.094 45.455 0.00 0.00 37.04 4.09
2568 4688 3.327757 TGGAATACCTCAGTTGTGCTCTT 59.672 43.478 0.00 0.00 37.04 2.85
2569 4689 4.202461 TGGAATACCTCAGTTGTGCTCTTT 60.202 41.667 0.00 0.00 37.04 2.52
2570 4690 4.762251 GGAATACCTCAGTTGTGCTCTTTT 59.238 41.667 0.00 0.00 0.00 2.27
2571 4691 5.106515 GGAATACCTCAGTTGTGCTCTTTTC 60.107 44.000 0.00 0.00 0.00 2.29
2572 4692 2.576615 ACCTCAGTTGTGCTCTTTTCC 58.423 47.619 0.00 0.00 0.00 3.13
2573 4693 2.173569 ACCTCAGTTGTGCTCTTTTCCT 59.826 45.455 0.00 0.00 0.00 3.36
2574 4694 3.217626 CCTCAGTTGTGCTCTTTTCCTT 58.782 45.455 0.00 0.00 0.00 3.36
2575 4695 3.004106 CCTCAGTTGTGCTCTTTTCCTTG 59.996 47.826 0.00 0.00 0.00 3.61
2576 4696 2.358898 TCAGTTGTGCTCTTTTCCTTGC 59.641 45.455 0.00 0.00 0.00 4.01
2577 4697 2.360165 CAGTTGTGCTCTTTTCCTTGCT 59.640 45.455 0.00 0.00 0.00 3.91
2578 4698 3.565482 CAGTTGTGCTCTTTTCCTTGCTA 59.435 43.478 0.00 0.00 0.00 3.49
2579 4699 3.817647 AGTTGTGCTCTTTTCCTTGCTAG 59.182 43.478 0.00 0.00 0.00 3.42
2580 4700 3.492102 TGTGCTCTTTTCCTTGCTAGT 57.508 42.857 0.00 0.00 0.00 2.57
2581 4701 3.403038 TGTGCTCTTTTCCTTGCTAGTC 58.597 45.455 0.00 0.00 0.00 2.59
2582 4702 3.071602 TGTGCTCTTTTCCTTGCTAGTCT 59.928 43.478 0.00 0.00 0.00 3.24
2583 4703 4.068599 GTGCTCTTTTCCTTGCTAGTCTT 58.931 43.478 0.00 0.00 0.00 3.01
2584 4704 4.067896 TGCTCTTTTCCTTGCTAGTCTTG 58.932 43.478 0.00 0.00 0.00 3.02
2585 4705 3.438434 GCTCTTTTCCTTGCTAGTCTTGG 59.562 47.826 0.00 0.00 0.00 3.61
2586 4706 4.646572 CTCTTTTCCTTGCTAGTCTTGGT 58.353 43.478 0.00 0.00 0.00 3.67
2587 4707 4.389374 TCTTTTCCTTGCTAGTCTTGGTG 58.611 43.478 0.00 0.00 0.00 4.17
2588 4708 4.102524 TCTTTTCCTTGCTAGTCTTGGTGA 59.897 41.667 0.00 0.00 0.00 4.02
2589 4709 3.685139 TTCCTTGCTAGTCTTGGTGAG 57.315 47.619 0.00 0.00 0.00 3.51
2590 4710 2.889512 TCCTTGCTAGTCTTGGTGAGA 58.110 47.619 0.00 0.00 0.00 3.27
2591 4711 3.445008 TCCTTGCTAGTCTTGGTGAGAT 58.555 45.455 0.00 0.00 36.61 2.75
2592 4712 3.196469 TCCTTGCTAGTCTTGGTGAGATG 59.804 47.826 0.00 0.00 36.61 2.90
2593 4713 3.055530 CCTTGCTAGTCTTGGTGAGATGT 60.056 47.826 0.00 0.00 36.61 3.06
2594 4714 3.599730 TGCTAGTCTTGGTGAGATGTG 57.400 47.619 0.00 0.00 36.61 3.21
2595 4715 2.275318 GCTAGTCTTGGTGAGATGTGC 58.725 52.381 0.00 0.00 36.61 4.57
2596 4716 2.354103 GCTAGTCTTGGTGAGATGTGCA 60.354 50.000 0.00 0.00 36.61 4.57
2597 4717 3.681034 GCTAGTCTTGGTGAGATGTGCAT 60.681 47.826 0.00 0.00 36.61 3.96
2598 4718 3.430042 AGTCTTGGTGAGATGTGCATT 57.570 42.857 0.00 0.00 36.61 3.56
2599 4719 3.341823 AGTCTTGGTGAGATGTGCATTC 58.658 45.455 0.00 0.00 36.61 2.67
2600 4720 3.008813 AGTCTTGGTGAGATGTGCATTCT 59.991 43.478 2.06 2.06 36.61 2.40
2601 4721 3.755378 GTCTTGGTGAGATGTGCATTCTT 59.245 43.478 3.90 0.00 36.61 2.52
2602 4722 4.005650 TCTTGGTGAGATGTGCATTCTTC 58.994 43.478 3.90 1.96 0.00 2.87
2603 4723 3.708403 TGGTGAGATGTGCATTCTTCT 57.292 42.857 3.90 0.00 0.00 2.85
2604 4724 4.025040 TGGTGAGATGTGCATTCTTCTT 57.975 40.909 3.90 0.00 0.00 2.52
2605 4725 4.005650 TGGTGAGATGTGCATTCTTCTTC 58.994 43.478 3.90 0.00 0.00 2.87
2606 4726 4.260170 GGTGAGATGTGCATTCTTCTTCT 58.740 43.478 3.90 0.00 0.00 2.85
2607 4727 4.699257 GGTGAGATGTGCATTCTTCTTCTT 59.301 41.667 3.90 0.00 0.00 2.52
2608 4728 5.391736 GGTGAGATGTGCATTCTTCTTCTTG 60.392 44.000 3.90 0.00 0.00 3.02
2609 4729 4.155462 TGAGATGTGCATTCTTCTTCTTGC 59.845 41.667 3.90 0.00 35.67 4.01
2610 4730 3.442977 AGATGTGCATTCTTCTTCTTGCC 59.557 43.478 0.00 0.00 34.20 4.52
2611 4731 2.867624 TGTGCATTCTTCTTCTTGCCT 58.132 42.857 0.00 0.00 34.20 4.75
2612 4732 2.816087 TGTGCATTCTTCTTCTTGCCTC 59.184 45.455 0.00 0.00 34.20 4.70
2613 4733 3.080319 GTGCATTCTTCTTCTTGCCTCT 58.920 45.455 0.00 0.00 34.20 3.69
2614 4734 3.126686 GTGCATTCTTCTTCTTGCCTCTC 59.873 47.826 0.00 0.00 34.20 3.20
2615 4735 3.008813 TGCATTCTTCTTCTTGCCTCTCT 59.991 43.478 0.00 0.00 34.20 3.10
2616 4736 3.622612 GCATTCTTCTTCTTGCCTCTCTC 59.377 47.826 0.00 0.00 0.00 3.20
2617 4737 4.829968 CATTCTTCTTCTTGCCTCTCTCA 58.170 43.478 0.00 0.00 0.00 3.27
2618 4738 4.533919 TTCTTCTTCTTGCCTCTCTCAG 57.466 45.455 0.00 0.00 0.00 3.35
2619 4739 2.830923 TCTTCTTCTTGCCTCTCTCAGG 59.169 50.000 0.00 0.00 46.82 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.767261 TGTTTTAAGCTAGAGAAACAGCAAAA 58.233 30.769 10.80 0.00 40.36 2.44
1 2 7.328277 TGTTTTAAGCTAGAGAAACAGCAAA 57.672 32.000 10.80 0.00 40.36 3.68
2 3 6.935741 TGTTTTAAGCTAGAGAAACAGCAA 57.064 33.333 10.80 0.00 40.36 3.91
4 5 8.883731 TGATATGTTTTAAGCTAGAGAAACAGC 58.116 33.333 16.58 11.48 42.93 4.40
10 11 9.944376 ACTGTTTGATATGTTTTAAGCTAGAGA 57.056 29.630 0.00 0.00 0.00 3.10
15 16 9.502091 TCTGTACTGTTTGATATGTTTTAAGCT 57.498 29.630 0.00 0.00 0.00 3.74
16 17 9.543018 GTCTGTACTGTTTGATATGTTTTAAGC 57.457 33.333 0.00 0.00 0.00 3.09
17 18 9.741168 CGTCTGTACTGTTTGATATGTTTTAAG 57.259 33.333 0.00 0.00 0.00 1.85
18 19 8.714179 CCGTCTGTACTGTTTGATATGTTTTAA 58.286 33.333 0.00 0.00 0.00 1.52
19 20 8.089597 TCCGTCTGTACTGTTTGATATGTTTTA 58.910 33.333 0.00 0.00 0.00 1.52
20 21 6.932400 TCCGTCTGTACTGTTTGATATGTTTT 59.068 34.615 0.00 0.00 0.00 2.43
21 22 6.460781 TCCGTCTGTACTGTTTGATATGTTT 58.539 36.000 0.00 0.00 0.00 2.83
22 23 6.032956 TCCGTCTGTACTGTTTGATATGTT 57.967 37.500 0.00 0.00 0.00 2.71
23 24 5.654603 TCCGTCTGTACTGTTTGATATGT 57.345 39.130 0.00 0.00 0.00 2.29
24 25 5.005779 GCTTCCGTCTGTACTGTTTGATATG 59.994 44.000 0.00 0.00 0.00 1.78
25 26 5.109903 GCTTCCGTCTGTACTGTTTGATAT 58.890 41.667 0.00 0.00 0.00 1.63
26 27 4.021807 TGCTTCCGTCTGTACTGTTTGATA 60.022 41.667 0.00 0.00 0.00 2.15
27 28 3.244078 TGCTTCCGTCTGTACTGTTTGAT 60.244 43.478 0.00 0.00 0.00 2.57
28 29 2.101750 TGCTTCCGTCTGTACTGTTTGA 59.898 45.455 0.00 0.00 0.00 2.69
29 30 2.479837 TGCTTCCGTCTGTACTGTTTG 58.520 47.619 0.00 0.00 0.00 2.93
30 31 2.902705 TGCTTCCGTCTGTACTGTTT 57.097 45.000 0.00 0.00 0.00 2.83
31 32 4.530710 TTATGCTTCCGTCTGTACTGTT 57.469 40.909 0.00 0.00 0.00 3.16
32 33 4.737855 ATTATGCTTCCGTCTGTACTGT 57.262 40.909 0.00 0.00 0.00 3.55
33 34 6.018994 GGTTAATTATGCTTCCGTCTGTACTG 60.019 42.308 0.00 0.00 0.00 2.74
34 35 6.047231 GGTTAATTATGCTTCCGTCTGTACT 58.953 40.000 0.00 0.00 0.00 2.73
35 36 5.051240 CGGTTAATTATGCTTCCGTCTGTAC 60.051 44.000 0.00 0.00 34.38 2.90
36 37 5.045215 CGGTTAATTATGCTTCCGTCTGTA 58.955 41.667 0.00 0.00 34.38 2.74
37 38 3.869246 CGGTTAATTATGCTTCCGTCTGT 59.131 43.478 0.00 0.00 34.38 3.41
38 39 3.869246 ACGGTTAATTATGCTTCCGTCTG 59.131 43.478 0.00 0.00 46.33 3.51
39 40 4.133013 ACGGTTAATTATGCTTCCGTCT 57.867 40.909 0.00 0.00 46.33 4.18
40 41 4.805192 TGTACGGTTAATTATGCTTCCGTC 59.195 41.667 10.20 4.27 46.33 4.79
42 43 5.464057 TGATGTACGGTTAATTATGCTTCCG 59.536 40.000 0.00 0.00 42.94 4.30
43 44 6.482308 AGTGATGTACGGTTAATTATGCTTCC 59.518 38.462 0.00 0.00 0.00 3.46
44 45 7.011109 ACAGTGATGTACGGTTAATTATGCTTC 59.989 37.037 0.00 0.00 33.79 3.86
45 46 6.821665 ACAGTGATGTACGGTTAATTATGCTT 59.178 34.615 0.00 0.00 33.79 3.91
46 47 6.257849 CACAGTGATGTACGGTTAATTATGCT 59.742 38.462 0.00 0.00 35.44 3.79
47 48 6.036735 ACACAGTGATGTACGGTTAATTATGC 59.963 38.462 7.81 0.00 35.44 3.14
48 49 7.514591 CGACACAGTGATGTACGGTTAATTATG 60.515 40.741 7.81 0.00 35.44 1.90
52 53 4.171005 CGACACAGTGATGTACGGTTAAT 58.829 43.478 7.81 0.00 35.44 1.40
68 69 2.937149 TGTTTTTCGATTGACCGACACA 59.063 40.909 0.00 0.00 38.39 3.72
74 75 7.581476 TGACTAATCTTGTTTTTCGATTGACC 58.419 34.615 0.00 0.00 0.00 4.02
82 83 9.788960 AGTTTTCACTGACTAATCTTGTTTTTC 57.211 29.630 0.00 0.00 0.00 2.29
100 102 1.368850 GCGCGTGGTCAGTTTTCAC 60.369 57.895 8.43 0.00 0.00 3.18
135 137 0.327259 GGGTTAGGTCCCCTTGTGAC 59.673 60.000 0.00 0.00 41.54 3.67
136 138 2.781631 GGGTTAGGTCCCCTTGTGA 58.218 57.895 0.00 0.00 41.54 3.58
144 147 3.405318 CGGGTGGGGGTTAGGTCC 61.405 72.222 0.00 0.00 0.00 4.46
145 148 4.105553 GCGGGTGGGGGTTAGGTC 62.106 72.222 0.00 0.00 0.00 3.85
146 149 4.669773 AGCGGGTGGGGGTTAGGT 62.670 66.667 0.00 0.00 0.00 3.08
181 184 2.248724 CGATAGCGACCCTCGACG 59.751 66.667 0.00 0.00 43.74 5.12
198 201 1.450312 CACTGTCCGGGCTTCATCC 60.450 63.158 7.97 0.00 0.00 3.51
200 203 1.296715 GTCACTGTCCGGGCTTCAT 59.703 57.895 7.97 0.00 0.00 2.57
201 204 2.741092 GTCACTGTCCGGGCTTCA 59.259 61.111 7.97 0.00 0.00 3.02
206 209 4.742201 CTGCCGTCACTGTCCGGG 62.742 72.222 14.96 0.00 44.36 5.73
212 215 4.435436 TAGCCGCTGCCGTCACTG 62.435 66.667 2.16 0.00 38.69 3.66
213 216 4.135153 CTAGCCGCTGCCGTCACT 62.135 66.667 2.16 0.00 38.69 3.41
214 217 4.129737 TCTAGCCGCTGCCGTCAC 62.130 66.667 2.16 0.00 38.69 3.67
215 218 4.129737 GTCTAGCCGCTGCCGTCA 62.130 66.667 2.16 0.00 38.69 4.35
216 219 4.874977 GGTCTAGCCGCTGCCGTC 62.875 72.222 2.16 0.00 38.69 4.79
218 221 4.577246 GAGGTCTAGCCGCTGCCG 62.577 72.222 2.16 0.00 43.70 5.69
219 222 4.228567 GGAGGTCTAGCCGCTGCC 62.229 72.222 2.16 2.79 43.70 4.85
220 223 4.228567 GGGAGGTCTAGCCGCTGC 62.229 72.222 2.16 0.00 43.70 5.25
221 224 3.541713 GGGGAGGTCTAGCCGCTG 61.542 72.222 2.16 0.00 43.70 5.18
222 225 3.756783 AGGGGAGGTCTAGCCGCT 61.757 66.667 0.00 0.00 43.70 5.52
223 226 3.228017 GAGGGGAGGTCTAGCCGC 61.228 72.222 0.00 0.00 43.70 6.53
224 227 2.700407 ATCGAGGGGAGGTCTAGCCG 62.700 65.000 0.00 0.00 43.70 5.52
225 228 1.154221 ATCGAGGGGAGGTCTAGCC 59.846 63.158 0.00 0.00 37.58 3.93
226 229 1.811645 GCATCGAGGGGAGGTCTAGC 61.812 65.000 0.00 0.00 0.00 3.42
227 230 1.519751 CGCATCGAGGGGAGGTCTAG 61.520 65.000 8.62 0.00 0.00 2.43
228 231 1.528542 CGCATCGAGGGGAGGTCTA 60.529 63.158 8.62 0.00 0.00 2.59
229 232 2.835431 CGCATCGAGGGGAGGTCT 60.835 66.667 8.62 0.00 0.00 3.85
236 239 4.918201 GGGAAGCCGCATCGAGGG 62.918 72.222 0.00 0.00 0.00 4.30
237 240 3.798954 GAGGGAAGCCGCATCGAGG 62.799 68.421 0.00 0.00 0.00 4.63
238 241 2.279784 GAGGGAAGCCGCATCGAG 60.280 66.667 0.00 0.00 0.00 4.04
239 242 2.759973 AGAGGGAAGCCGCATCGA 60.760 61.111 0.00 0.00 0.00 3.59
240 243 2.279784 GAGAGGGAAGCCGCATCG 60.280 66.667 0.00 0.00 0.00 3.84
241 244 2.049627 ATGGAGAGGGAAGCCGCATC 62.050 60.000 0.00 0.00 0.00 3.91
242 245 2.074948 ATGGAGAGGGAAGCCGCAT 61.075 57.895 0.00 0.00 0.00 4.73
243 246 2.688666 ATGGAGAGGGAAGCCGCA 60.689 61.111 0.00 0.00 0.00 5.69
244 247 2.049627 ATCATGGAGAGGGAAGCCGC 62.050 60.000 0.00 0.00 0.00 6.53
245 248 0.250209 CATCATGGAGAGGGAAGCCG 60.250 60.000 0.00 0.00 0.00 5.52
246 249 1.135094 TCATCATGGAGAGGGAAGCC 58.865 55.000 0.00 0.00 0.00 4.35
247 250 2.371179 TCATCATCATGGAGAGGGAAGC 59.629 50.000 0.00 0.00 0.00 3.86
248 251 3.554544 CGTCATCATCATGGAGAGGGAAG 60.555 52.174 0.00 0.00 0.00 3.46
249 252 2.366590 CGTCATCATCATGGAGAGGGAA 59.633 50.000 0.00 0.00 0.00 3.97
250 253 1.966354 CGTCATCATCATGGAGAGGGA 59.034 52.381 0.00 0.00 0.00 4.20
251 254 1.607509 GCGTCATCATCATGGAGAGGG 60.608 57.143 0.00 0.00 0.00 4.30
252 255 1.343789 AGCGTCATCATCATGGAGAGG 59.656 52.381 0.00 0.00 0.00 3.69
253 256 2.223994 ACAGCGTCATCATCATGGAGAG 60.224 50.000 0.00 0.00 0.00 3.20
254 257 1.758862 ACAGCGTCATCATCATGGAGA 59.241 47.619 0.00 0.00 0.00 3.71
255 258 1.865340 CACAGCGTCATCATCATGGAG 59.135 52.381 0.00 0.00 0.00 3.86
256 259 1.473788 CCACAGCGTCATCATCATGGA 60.474 52.381 0.00 0.00 0.00 3.41
257 260 0.942252 CCACAGCGTCATCATCATGG 59.058 55.000 0.00 0.00 0.00 3.66
258 261 1.596260 GACCACAGCGTCATCATCATG 59.404 52.381 0.00 0.00 32.74 3.07
259 262 1.483827 AGACCACAGCGTCATCATCAT 59.516 47.619 0.00 0.00 35.07 2.45
260 263 0.897621 AGACCACAGCGTCATCATCA 59.102 50.000 0.00 0.00 35.07 3.07
261 264 1.662629 CAAGACCACAGCGTCATCATC 59.337 52.381 0.00 0.00 35.07 2.92
262 265 1.676916 CCAAGACCACAGCGTCATCAT 60.677 52.381 0.00 0.00 35.07 2.45
263 266 0.320683 CCAAGACCACAGCGTCATCA 60.321 55.000 0.00 0.00 35.07 3.07
264 267 1.639298 GCCAAGACCACAGCGTCATC 61.639 60.000 0.00 0.00 35.07 2.92
265 268 1.672356 GCCAAGACCACAGCGTCAT 60.672 57.895 0.00 0.00 35.07 3.06
266 269 2.280797 GCCAAGACCACAGCGTCA 60.281 61.111 0.00 0.00 35.07 4.35
267 270 3.414700 CGCCAAGACCACAGCGTC 61.415 66.667 0.00 0.00 43.45 5.19
270 273 2.401766 CCATCGCCAAGACCACAGC 61.402 63.158 0.00 0.00 0.00 4.40
271 274 1.003355 ACCATCGCCAAGACCACAG 60.003 57.895 0.00 0.00 0.00 3.66
272 275 1.302431 CACCATCGCCAAGACCACA 60.302 57.895 0.00 0.00 0.00 4.17
273 276 2.040544 CCACCATCGCCAAGACCAC 61.041 63.158 0.00 0.00 0.00 4.16
274 277 2.350895 CCACCATCGCCAAGACCA 59.649 61.111 0.00 0.00 0.00 4.02
275 278 2.040544 CACCACCATCGCCAAGACC 61.041 63.158 0.00 0.00 0.00 3.85
276 279 2.040544 CCACCACCATCGCCAAGAC 61.041 63.158 0.00 0.00 0.00 3.01
277 280 1.773856 TTCCACCACCATCGCCAAGA 61.774 55.000 0.00 0.00 0.00 3.02
278 281 1.303236 TTCCACCACCATCGCCAAG 60.303 57.895 0.00 0.00 0.00 3.61
279 282 1.303236 CTTCCACCACCATCGCCAA 60.303 57.895 0.00 0.00 0.00 4.52
280 283 1.773856 TTCTTCCACCACCATCGCCA 61.774 55.000 0.00 0.00 0.00 5.69
281 284 1.002624 TTCTTCCACCACCATCGCC 60.003 57.895 0.00 0.00 0.00 5.54
282 285 1.648467 GCTTCTTCCACCACCATCGC 61.648 60.000 0.00 0.00 0.00 4.58
283 286 0.036010 AGCTTCTTCCACCACCATCG 60.036 55.000 0.00 0.00 0.00 3.84
284 287 3.209410 CATAGCTTCTTCCACCACCATC 58.791 50.000 0.00 0.00 0.00 3.51
285 288 2.684927 GCATAGCTTCTTCCACCACCAT 60.685 50.000 0.00 0.00 0.00 3.55
286 289 1.340017 GCATAGCTTCTTCCACCACCA 60.340 52.381 0.00 0.00 0.00 4.17
287 290 1.065126 AGCATAGCTTCTTCCACCACC 60.065 52.381 0.00 0.00 33.89 4.61
288 291 2.284190 GAGCATAGCTTCTTCCACCAC 58.716 52.381 0.00 0.00 39.88 4.16
289 292 1.134699 CGAGCATAGCTTCTTCCACCA 60.135 52.381 0.00 0.00 39.88 4.17
290 293 1.576356 CGAGCATAGCTTCTTCCACC 58.424 55.000 0.00 0.00 39.88 4.61
291 294 1.134670 ACCGAGCATAGCTTCTTCCAC 60.135 52.381 0.00 0.00 39.88 4.02
292 295 1.134699 CACCGAGCATAGCTTCTTCCA 60.135 52.381 0.00 0.00 39.88 3.53
293 296 1.576356 CACCGAGCATAGCTTCTTCC 58.424 55.000 0.00 0.00 39.88 3.46
294 297 1.134670 ACCACCGAGCATAGCTTCTTC 60.135 52.381 0.00 0.00 39.88 2.87
295 298 0.905357 ACCACCGAGCATAGCTTCTT 59.095 50.000 0.00 0.00 39.88 2.52
296 299 0.905357 AACCACCGAGCATAGCTTCT 59.095 50.000 0.00 0.00 39.88 2.85
297 300 1.291132 GAACCACCGAGCATAGCTTC 58.709 55.000 0.00 0.00 39.88 3.86
298 301 0.460284 CGAACCACCGAGCATAGCTT 60.460 55.000 0.00 0.00 39.88 3.74
299 302 1.141881 CGAACCACCGAGCATAGCT 59.858 57.895 0.00 0.00 43.88 3.32
300 303 2.526120 GCGAACCACCGAGCATAGC 61.526 63.158 0.00 0.00 0.00 2.97
301 304 1.883084 GGCGAACCACCGAGCATAG 60.883 63.158 0.00 0.00 35.26 2.23
302 305 2.185867 GGCGAACCACCGAGCATA 59.814 61.111 0.00 0.00 35.26 3.14
303 306 4.778143 GGGCGAACCACCGAGCAT 62.778 66.667 0.00 0.00 39.85 3.79
306 309 3.234630 TTGAGGGCGAACCACCGAG 62.235 63.158 0.00 0.00 43.89 4.63
307 310 3.235481 TTGAGGGCGAACCACCGA 61.235 61.111 0.00 0.00 43.89 4.69
308 311 3.047877 GTTGAGGGCGAACCACCG 61.048 66.667 0.00 0.00 43.89 4.94
309 312 3.047877 CGTTGAGGGCGAACCACC 61.048 66.667 0.00 0.00 43.89 4.61
310 313 3.723348 GCGTTGAGGGCGAACCAC 61.723 66.667 0.00 0.00 43.89 4.16
311 314 4.243008 TGCGTTGAGGGCGAACCA 62.243 61.111 0.00 0.00 43.89 3.67
312 315 3.423154 CTGCGTTGAGGGCGAACC 61.423 66.667 0.00 0.00 40.67 3.62
313 316 4.090057 GCTGCGTTGAGGGCGAAC 62.090 66.667 0.00 0.00 0.00 3.95
318 321 4.335647 AGGTGGCTGCGTTGAGGG 62.336 66.667 0.00 0.00 0.00 4.30
319 322 3.052082 CAGGTGGCTGCGTTGAGG 61.052 66.667 0.00 0.00 0.00 3.86
320 323 2.281070 ACAGGTGGCTGCGTTGAG 60.281 61.111 0.00 0.00 0.00 3.02
321 324 2.591429 CACAGGTGGCTGCGTTGA 60.591 61.111 0.00 0.00 0.00 3.18
322 325 2.591429 TCACAGGTGGCTGCGTTG 60.591 61.111 0.00 0.00 0.00 4.10
323 326 2.591715 GTCACAGGTGGCTGCGTT 60.592 61.111 0.00 0.00 31.34 4.84
324 327 4.969196 CGTCACAGGTGGCTGCGT 62.969 66.667 2.26 0.00 31.96 5.24
325 328 4.662961 TCGTCACAGGTGGCTGCG 62.663 66.667 2.26 2.23 31.96 5.18
326 329 3.044305 GTCGTCACAGGTGGCTGC 61.044 66.667 2.26 0.00 31.96 5.25
327 330 2.734723 CGTCGTCACAGGTGGCTG 60.735 66.667 2.26 0.00 31.96 4.85
328 331 4.664677 GCGTCGTCACAGGTGGCT 62.665 66.667 2.26 0.00 31.96 4.75
334 337 4.778415 CTCCCGGCGTCGTCACAG 62.778 72.222 9.28 0.00 33.95 3.66
336 339 4.773117 GACTCCCGGCGTCGTCAC 62.773 72.222 9.28 0.00 33.95 3.67
338 341 3.680338 GAAGACTCCCGGCGTCGTC 62.680 68.421 9.28 17.28 36.53 4.20
339 342 3.745803 GAAGACTCCCGGCGTCGT 61.746 66.667 9.28 11.92 36.53 4.34
340 343 4.493747 GGAAGACTCCCGGCGTCG 62.494 72.222 0.29 0.29 35.42 5.12
341 344 3.069318 AGGAAGACTCCCGGCGTC 61.069 66.667 6.01 12.66 43.64 5.19
342 345 3.382832 CAGGAAGACTCCCGGCGT 61.383 66.667 6.01 0.00 43.64 5.68
343 346 4.148825 CCAGGAAGACTCCCGGCG 62.149 72.222 0.00 0.00 43.64 6.46
344 347 3.787001 CCCAGGAAGACTCCCGGC 61.787 72.222 0.00 0.00 43.64 6.13
345 348 3.787001 GCCCAGGAAGACTCCCGG 61.787 72.222 0.00 0.00 43.64 5.73
346 349 1.915078 AATGCCCAGGAAGACTCCCG 61.915 60.000 0.00 0.00 43.64 5.14
347 350 0.106967 GAATGCCCAGGAAGACTCCC 60.107 60.000 0.00 0.00 43.64 4.30
348 351 0.106967 GGAATGCCCAGGAAGACTCC 60.107 60.000 0.00 0.00 42.81 3.85
349 352 0.620556 TGGAATGCCCAGGAAGACTC 59.379 55.000 0.00 0.00 40.82 3.36
350 353 2.791253 TGGAATGCCCAGGAAGACT 58.209 52.632 0.00 0.00 40.82 3.24
361 364 5.596836 TTCTTTGGTATTCCATGGAATGC 57.403 39.130 39.01 36.97 44.97 3.56
362 365 7.558604 ACAATTCTTTGGTATTCCATGGAATG 58.441 34.615 39.01 25.56 43.91 2.67
363 366 7.738437 ACAATTCTTTGGTATTCCATGGAAT 57.262 32.000 35.94 35.94 43.91 3.01
364 367 7.234371 TCAACAATTCTTTGGTATTCCATGGAA 59.766 33.333 28.92 28.92 43.91 3.53
365 368 6.723515 TCAACAATTCTTTGGTATTCCATGGA 59.276 34.615 11.44 11.44 43.91 3.41
366 369 6.813152 GTCAACAATTCTTTGGTATTCCATGG 59.187 38.462 4.97 4.97 43.91 3.66
367 370 6.813152 GGTCAACAATTCTTTGGTATTCCATG 59.187 38.462 0.00 0.00 43.91 3.66
368 371 6.070824 GGGTCAACAATTCTTTGGTATTCCAT 60.071 38.462 0.00 0.00 43.91 3.41
369 372 5.245075 GGGTCAACAATTCTTTGGTATTCCA 59.755 40.000 0.00 0.00 42.66 3.53
370 373 5.245075 TGGGTCAACAATTCTTTGGTATTCC 59.755 40.000 0.00 0.00 37.15 3.01
371 374 6.339587 TGGGTCAACAATTCTTTGGTATTC 57.660 37.500 0.00 0.00 37.15 1.75
372 375 6.933514 ATGGGTCAACAATTCTTTGGTATT 57.066 33.333 0.00 0.00 37.15 1.89
373 376 6.295802 CCAATGGGTCAACAATTCTTTGGTAT 60.296 38.462 0.00 0.00 37.15 2.73
374 377 5.011533 CCAATGGGTCAACAATTCTTTGGTA 59.988 40.000 0.00 0.00 37.15 3.25
375 378 4.202346 CCAATGGGTCAACAATTCTTTGGT 60.202 41.667 0.00 0.00 37.15 3.67
376 379 4.317488 CCAATGGGTCAACAATTCTTTGG 58.683 43.478 0.00 0.00 37.15 3.28
391 394 3.815401 GCTAGCAATAGTGTACCAATGGG 59.185 47.826 10.63 0.00 41.29 4.00
392 395 4.708177 AGCTAGCAATAGTGTACCAATGG 58.292 43.478 18.83 0.00 0.00 3.16
393 396 5.504665 GCAAGCTAGCAATAGTGTACCAATG 60.505 44.000 18.83 0.00 0.00 2.82
394 397 4.576463 GCAAGCTAGCAATAGTGTACCAAT 59.424 41.667 18.83 0.00 0.00 3.16
395 398 3.938963 GCAAGCTAGCAATAGTGTACCAA 59.061 43.478 18.83 0.00 0.00 3.67
396 399 3.197766 AGCAAGCTAGCAATAGTGTACCA 59.802 43.478 18.83 0.00 36.85 3.25
397 400 3.557595 CAGCAAGCTAGCAATAGTGTACC 59.442 47.826 18.83 0.00 36.85 3.34
398 401 4.033358 CACAGCAAGCTAGCAATAGTGTAC 59.967 45.833 18.83 0.00 36.85 2.90
399 402 4.183865 CACAGCAAGCTAGCAATAGTGTA 58.816 43.478 18.83 0.00 36.85 2.90
400 403 3.005554 CACAGCAAGCTAGCAATAGTGT 58.994 45.455 18.83 10.43 36.85 3.55
401 404 3.005554 ACACAGCAAGCTAGCAATAGTG 58.994 45.455 18.83 19.01 36.85 2.74
402 405 3.340814 ACACAGCAAGCTAGCAATAGT 57.659 42.857 18.83 5.77 36.85 2.12
403 406 7.516481 CAATATACACAGCAAGCTAGCAATAG 58.484 38.462 18.83 5.10 36.85 1.73
404 407 6.073058 GCAATATACACAGCAAGCTAGCAATA 60.073 38.462 18.83 1.12 36.85 1.90
405 408 5.278169 GCAATATACACAGCAAGCTAGCAAT 60.278 40.000 18.83 1.77 36.85 3.56
406 409 4.035558 GCAATATACACAGCAAGCTAGCAA 59.964 41.667 18.83 0.00 36.85 3.91
407 410 3.561310 GCAATATACACAGCAAGCTAGCA 59.439 43.478 18.83 0.00 36.85 3.49
408 411 3.812053 AGCAATATACACAGCAAGCTAGC 59.188 43.478 6.62 6.62 0.00 3.42
409 412 7.516481 CAATAGCAATATACACAGCAAGCTAG 58.484 38.462 0.00 0.00 36.86 3.42
410 413 6.073058 GCAATAGCAATATACACAGCAAGCTA 60.073 38.462 0.00 0.00 41.58 3.32
411 414 5.278169 GCAATAGCAATATACACAGCAAGCT 60.278 40.000 0.00 0.00 41.58 3.74
412 415 4.913924 GCAATAGCAATATACACAGCAAGC 59.086 41.667 0.00 0.00 41.58 4.01
428 431 4.032445 CACTCATTTGTGCAATGCAATAGC 59.968 41.667 10.44 0.00 42.06 2.97
429 432 5.696260 CACTCATTTGTGCAATGCAATAG 57.304 39.130 10.44 3.99 42.06 1.73
440 443 0.604578 CCCCTTGGCACTCATTTGTG 59.395 55.000 0.00 0.00 40.62 3.33
441 444 0.542702 CCCCCTTGGCACTCATTTGT 60.543 55.000 0.00 0.00 0.00 2.83
442 445 2.279842 CCCCCTTGGCACTCATTTG 58.720 57.895 0.00 0.00 0.00 2.32
443 446 4.872293 CCCCCTTGGCACTCATTT 57.128 55.556 0.00 0.00 0.00 2.32
457 460 2.851588 GGAGCCAGGATCTCCCCC 60.852 72.222 4.29 0.00 43.32 5.40
458 461 3.237741 CGGAGCCAGGATCTCCCC 61.238 72.222 4.29 0.00 45.66 4.81
471 474 2.507992 CTTCAGTCAGCGGCGGAG 60.508 66.667 9.78 0.00 0.00 4.63
472 475 4.742201 GCTTCAGTCAGCGGCGGA 62.742 66.667 9.78 0.00 0.00 5.54
478 481 2.507110 TAGCCACCGCTTCAGTCAGC 62.507 60.000 0.00 0.00 45.55 4.26
479 482 0.459237 CTAGCCACCGCTTCAGTCAG 60.459 60.000 0.00 0.00 45.55 3.51
480 483 1.591703 CTAGCCACCGCTTCAGTCA 59.408 57.895 0.00 0.00 45.55 3.41
481 484 1.153549 CCTAGCCACCGCTTCAGTC 60.154 63.158 0.00 0.00 45.55 3.51
482 485 1.608717 CTCCTAGCCACCGCTTCAGT 61.609 60.000 0.00 0.00 45.55 3.41
483 486 1.142748 CTCCTAGCCACCGCTTCAG 59.857 63.158 0.00 0.00 45.55 3.02
484 487 3.019003 GCTCCTAGCCACCGCTTCA 62.019 63.158 0.00 0.00 45.55 3.02
485 488 2.202946 GCTCCTAGCCACCGCTTC 60.203 66.667 0.00 0.00 45.55 3.86
486 489 2.685380 AGCTCCTAGCCACCGCTT 60.685 61.111 0.00 0.00 45.55 4.68
488 491 3.145422 GAGAGCTCCTAGCCACCGC 62.145 68.421 10.93 0.00 43.77 5.68
489 492 2.840066 CGAGAGCTCCTAGCCACCG 61.840 68.421 10.93 0.00 43.77 4.94
490 493 0.825840 ATCGAGAGCTCCTAGCCACC 60.826 60.000 10.93 0.00 43.77 4.61
491 494 0.596082 GATCGAGAGCTCCTAGCCAC 59.404 60.000 10.93 0.00 43.77 5.01
492 495 0.538516 GGATCGAGAGCTCCTAGCCA 60.539 60.000 10.93 0.00 43.77 4.75
493 496 0.538516 TGGATCGAGAGCTCCTAGCC 60.539 60.000 10.93 8.98 46.35 3.93
494 497 0.596082 GTGGATCGAGAGCTCCTAGC 59.404 60.000 10.93 0.00 46.35 3.42
495 498 1.243902 GGTGGATCGAGAGCTCCTAG 58.756 60.000 10.93 1.91 46.35 3.02
496 499 0.178987 GGGTGGATCGAGAGCTCCTA 60.179 60.000 10.93 0.00 46.35 2.94
497 500 1.456705 GGGTGGATCGAGAGCTCCT 60.457 63.158 10.93 0.00 46.35 3.69
498 501 2.851071 CGGGTGGATCGAGAGCTCC 61.851 68.421 10.93 0.68 46.38 4.70
499 502 1.175983 ATCGGGTGGATCGAGAGCTC 61.176 60.000 5.27 5.27 40.09 4.09
500 503 1.152652 ATCGGGTGGATCGAGAGCT 60.153 57.895 0.00 0.00 40.09 4.09
501 504 1.287503 GATCGGGTGGATCGAGAGC 59.712 63.158 0.00 0.00 42.02 4.09
510 513 1.070445 GCAGATCCAGATCGGGTGG 59.930 63.158 11.92 2.32 42.48 4.61
511 514 1.300465 CGCAGATCCAGATCGGGTG 60.300 63.158 11.92 4.31 42.48 4.61
512 515 1.330655 AACGCAGATCCAGATCGGGT 61.331 55.000 11.92 11.29 42.48 5.28
513 516 0.877649 CAACGCAGATCCAGATCGGG 60.878 60.000 5.39 5.39 42.48 5.14
514 517 0.877649 CCAACGCAGATCCAGATCGG 60.878 60.000 3.72 3.72 42.48 4.18
515 518 1.493950 GCCAACGCAGATCCAGATCG 61.494 60.000 2.08 0.00 42.48 3.69
516 519 1.162800 GGCCAACGCAGATCCAGATC 61.163 60.000 0.00 0.00 38.09 2.75
517 520 1.153086 GGCCAACGCAGATCCAGAT 60.153 57.895 0.00 0.00 36.38 2.90
518 521 2.268920 GGCCAACGCAGATCCAGA 59.731 61.111 0.00 0.00 36.38 3.86
519 522 3.197790 CGGCCAACGCAGATCCAG 61.198 66.667 2.24 0.00 36.38 3.86
520 523 4.776322 CCGGCCAACGCAGATCCA 62.776 66.667 2.24 0.00 42.52 3.41
521 524 4.467084 TCCGGCCAACGCAGATCC 62.467 66.667 2.24 0.00 42.52 3.36
522 525 2.892425 CTCCGGCCAACGCAGATC 60.892 66.667 2.24 0.00 42.52 2.75
523 526 4.473520 CCTCCGGCCAACGCAGAT 62.474 66.667 2.24 0.00 42.52 2.90
525 528 4.697756 TTCCTCCGGCCAACGCAG 62.698 66.667 2.24 0.00 42.52 5.18
527 530 4.699522 AGTTCCTCCGGCCAACGC 62.700 66.667 2.24 0.00 42.52 4.84
528 531 2.434359 GAGTTCCTCCGGCCAACG 60.434 66.667 2.24 0.00 43.80 4.10
529 532 1.072505 TTGAGTTCCTCCGGCCAAC 59.927 57.895 2.24 0.00 0.00 3.77
530 533 1.072505 GTTGAGTTCCTCCGGCCAA 59.927 57.895 2.24 0.00 0.00 4.52
531 534 2.144078 TGTTGAGTTCCTCCGGCCA 61.144 57.895 2.24 0.00 0.00 5.36
532 535 1.671379 GTGTTGAGTTCCTCCGGCC 60.671 63.158 0.00 0.00 0.00 6.13
533 536 2.027625 CGTGTTGAGTTCCTCCGGC 61.028 63.158 0.00 0.00 0.00 6.13
534 537 0.944311 CACGTGTTGAGTTCCTCCGG 60.944 60.000 7.58 0.00 0.00 5.14
535 538 0.944311 CCACGTGTTGAGTTCCTCCG 60.944 60.000 15.65 0.00 0.00 4.63
536 539 0.106149 ACCACGTGTTGAGTTCCTCC 59.894 55.000 15.65 0.00 0.00 4.30
537 540 1.949465 AACCACGTGTTGAGTTCCTC 58.051 50.000 15.65 0.00 35.31 3.71
546 549 1.595929 CCGTAGGCAACCACGTGTT 60.596 57.895 15.65 6.19 46.14 3.32
547 550 2.029964 CCGTAGGCAACCACGTGT 59.970 61.111 15.65 0.00 46.14 4.49
558 561 3.389062 AGGCAACATCACACCCGTAGG 62.389 57.143 0.00 0.00 46.80 3.18
559 562 0.036388 AGGCAACATCACACCCGTAG 60.036 55.000 0.00 0.00 41.41 3.51
560 563 0.036765 GAGGCAACATCACACCCGTA 60.037 55.000 0.00 0.00 41.41 4.02
561 564 1.302511 GAGGCAACATCACACCCGT 60.303 57.895 0.00 0.00 41.41 5.28
562 565 2.390599 CGAGGCAACATCACACCCG 61.391 63.158 0.00 0.00 41.41 5.28
563 566 0.889186 AACGAGGCAACATCACACCC 60.889 55.000 0.00 0.00 41.41 4.61
564 567 0.238289 CAACGAGGCAACATCACACC 59.762 55.000 0.00 0.00 41.41 4.16
565 568 0.385974 GCAACGAGGCAACATCACAC 60.386 55.000 0.00 0.00 41.41 3.82
566 569 0.817229 TGCAACGAGGCAACATCACA 60.817 50.000 3.39 0.00 41.65 3.58
567 570 0.110056 CTGCAACGAGGCAACATCAC 60.110 55.000 7.14 0.00 44.40 3.06
568 571 1.855213 GCTGCAACGAGGCAACATCA 61.855 55.000 7.14 0.00 44.40 3.07
569 572 1.154150 GCTGCAACGAGGCAACATC 60.154 57.895 7.14 0.00 44.40 3.06
570 573 1.898094 TGCTGCAACGAGGCAACAT 60.898 52.632 0.00 0.00 44.40 2.71
571 574 2.515757 TGCTGCAACGAGGCAACA 60.516 55.556 0.00 6.21 44.40 3.33
572 575 2.050985 GTGCTGCAACGAGGCAAC 60.051 61.111 2.77 3.84 44.40 4.17
573 576 3.286751 GGTGCTGCAACGAGGCAA 61.287 61.111 2.77 0.00 44.40 4.52
593 596 4.060038 CAAAGCCCCAAGCCGCAG 62.060 66.667 0.00 0.00 45.47 5.18
596 599 4.060038 CAGCAAAGCCCCAAGCCG 62.060 66.667 0.00 0.00 45.47 5.52
597 600 4.383861 GCAGCAAAGCCCCAAGCC 62.384 66.667 0.00 0.00 45.47 4.35
614 617 2.963928 TATTGCATGAGCCCCGCAGG 62.964 60.000 0.00 0.00 44.07 4.85
615 618 1.512996 CTATTGCATGAGCCCCGCAG 61.513 60.000 0.00 0.00 41.13 5.18
616 619 1.526686 CTATTGCATGAGCCCCGCA 60.527 57.895 0.00 0.00 41.13 5.69
617 620 2.912624 GCTATTGCATGAGCCCCGC 61.913 63.158 8.79 0.00 41.13 6.13
618 621 1.228063 AGCTATTGCATGAGCCCCG 60.228 57.895 14.89 0.00 42.74 5.73
619 622 2.338381 CAGCTATTGCATGAGCCCC 58.662 57.895 14.89 0.00 42.74 5.80
638 641 4.700365 TCGGCGACACTGCGTCAG 62.700 66.667 4.99 5.47 45.70 3.51
639 642 4.700365 CTCGGCGACACTGCGTCA 62.700 66.667 4.99 0.00 45.70 4.35
652 655 2.521958 ATTTGGACGTGGAGCCTCGG 62.522 60.000 14.48 0.00 37.27 4.63
653 656 0.673644 AATTTGGACGTGGAGCCTCG 60.674 55.000 9.21 9.21 38.64 4.63
654 657 2.396590 TAATTTGGACGTGGAGCCTC 57.603 50.000 0.00 0.00 0.00 4.70
655 658 2.505819 AGATAATTTGGACGTGGAGCCT 59.494 45.455 0.00 0.00 0.00 4.58
656 659 2.919228 AGATAATTTGGACGTGGAGCC 58.081 47.619 0.00 0.00 0.00 4.70
657 660 4.058817 CCTAGATAATTTGGACGTGGAGC 58.941 47.826 0.00 0.00 0.00 4.70
658 661 5.531122 TCCTAGATAATTTGGACGTGGAG 57.469 43.478 0.00 0.00 0.00 3.86
659 662 5.943349 TTCCTAGATAATTTGGACGTGGA 57.057 39.130 0.00 0.00 0.00 4.02
660 663 6.995511 TTTTCCTAGATAATTTGGACGTGG 57.004 37.500 0.00 0.00 0.00 4.94
693 699 5.521735 CGGATCTCTACCAATTCAGAGTTTG 59.478 44.000 7.70 0.00 39.48 2.93
698 704 2.365617 GCCGGATCTCTACCAATTCAGA 59.634 50.000 5.05 0.00 0.00 3.27
892 901 4.293648 CCGATACATGCGGGCCGA 62.294 66.667 33.44 15.74 44.87 5.54
938 947 0.319469 TCTGATTTCACACAGCGCGA 60.319 50.000 12.10 0.00 34.57 5.87
944 953 2.771089 GCTCCACTCTGATTTCACACA 58.229 47.619 0.00 0.00 0.00 3.72
959 973 0.826715 CAGATTTCTCCTCCGCTCCA 59.173 55.000 0.00 0.00 0.00 3.86
1037 1086 3.288308 CTTCCTGCAGCTCGACGGT 62.288 63.158 8.66 0.00 0.00 4.83
1418 3382 1.272781 GACCTTCAGATCGAGCAACG 58.727 55.000 2.38 0.00 44.09 4.10
1435 3402 3.429410 GGGAGCTACCATTGCAAATTGAC 60.429 47.826 11.24 0.00 41.20 3.18
1486 3453 2.685388 TGATCTAGCAGAGACAGAACCG 59.315 50.000 0.00 0.00 36.87 4.44
1511 3478 7.201938 CCAGCTATCTCTTCATTCTTCTCTCTT 60.202 40.741 0.00 0.00 0.00 2.85
1602 3569 6.998673 ACCAAGAACTAACTTAACATCTTGCT 59.001 34.615 7.60 0.00 41.34 3.91
1655 3623 5.527214 CACATTCAACTAAACCAGACACTCA 59.473 40.000 0.00 0.00 0.00 3.41
1914 4023 5.534207 TGGAATTCATTTGGTATGGATGC 57.466 39.130 7.93 0.00 0.00 3.91
1998 4108 3.667497 TGCGAATGCCCAAAAACAATA 57.333 38.095 0.00 0.00 41.78 1.90
2007 4117 1.838112 ATCTCTTTTGCGAATGCCCA 58.162 45.000 0.00 0.00 41.78 5.36
2008 4118 4.574599 AATATCTCTTTTGCGAATGCCC 57.425 40.909 0.00 0.00 41.78 5.36
2027 4137 7.982761 ACATTTTCAATGTAATGGTGCAAAT 57.017 28.000 12.61 0.00 36.34 2.32
2099 4209 5.482526 TGCAGTGGAAACTACTAGTTATGGA 59.517 40.000 0.00 0.00 37.47 3.41
2159 4269 6.948886 TGGAGCTAAGAGAGTAAGAAGAAAGA 59.051 38.462 0.00 0.00 0.00 2.52
2295 4405 1.630369 ACCATTGCTTCTGGCTCTACA 59.370 47.619 0.43 0.00 42.39 2.74
2326 4436 3.439476 GCATCTCAAGCTCAATCACAAGT 59.561 43.478 0.00 0.00 0.00 3.16
2360 4470 2.031495 ACCAGCTCCTAGAACCAGTT 57.969 50.000 0.00 0.00 0.00 3.16
2364 4474 1.623811 TCACAACCAGCTCCTAGAACC 59.376 52.381 0.00 0.00 0.00 3.62
2372 4482 1.818642 AGCTCAATCACAACCAGCTC 58.181 50.000 0.00 0.00 35.46 4.09
2407 4517 2.175878 ACAGCTAGAACCAGTGCTTG 57.824 50.000 0.00 0.00 33.03 4.01
2446 4556 2.867109 TCTCTCCTTTTCTGCCTTGG 57.133 50.000 0.00 0.00 0.00 3.61
2447 4557 5.353678 CACTATTCTCTCCTTTTCTGCCTTG 59.646 44.000 0.00 0.00 0.00 3.61
2536 4656 9.747898 ACAACTGAGGTATTCCATAATTTTACA 57.252 29.630 0.00 0.00 35.89 2.41
2538 4658 8.682710 GCACAACTGAGGTATTCCATAATTTTA 58.317 33.333 0.00 0.00 35.89 1.52
2539 4659 7.397192 AGCACAACTGAGGTATTCCATAATTTT 59.603 33.333 0.00 0.00 35.89 1.82
2540 4660 6.891908 AGCACAACTGAGGTATTCCATAATTT 59.108 34.615 0.00 0.00 35.89 1.82
2541 4661 6.426587 AGCACAACTGAGGTATTCCATAATT 58.573 36.000 0.00 0.00 35.89 1.40
2542 4662 6.006275 AGCACAACTGAGGTATTCCATAAT 57.994 37.500 0.00 0.00 35.89 1.28
2543 4663 5.189736 AGAGCACAACTGAGGTATTCCATAA 59.810 40.000 0.00 0.00 35.89 1.90
2544 4664 4.716784 AGAGCACAACTGAGGTATTCCATA 59.283 41.667 0.00 0.00 35.89 2.74
2545 4665 3.521126 AGAGCACAACTGAGGTATTCCAT 59.479 43.478 0.00 0.00 35.89 3.41
2546 4666 2.906389 AGAGCACAACTGAGGTATTCCA 59.094 45.455 0.00 0.00 35.89 3.53
2547 4667 3.618690 AGAGCACAACTGAGGTATTCC 57.381 47.619 0.00 0.00 0.00 3.01
2548 4668 5.106515 GGAAAAGAGCACAACTGAGGTATTC 60.107 44.000 0.00 0.00 0.00 1.75
2549 4669 4.762251 GGAAAAGAGCACAACTGAGGTATT 59.238 41.667 0.00 0.00 0.00 1.89
2550 4670 4.042187 AGGAAAAGAGCACAACTGAGGTAT 59.958 41.667 0.00 0.00 0.00 2.73
2551 4671 3.391296 AGGAAAAGAGCACAACTGAGGTA 59.609 43.478 0.00 0.00 0.00 3.08
2552 4672 2.173569 AGGAAAAGAGCACAACTGAGGT 59.826 45.455 0.00 0.00 0.00 3.85
2553 4673 2.856222 AGGAAAAGAGCACAACTGAGG 58.144 47.619 0.00 0.00 0.00 3.86
2554 4674 3.549625 GCAAGGAAAAGAGCACAACTGAG 60.550 47.826 0.00 0.00 0.00 3.35
2555 4675 2.358898 GCAAGGAAAAGAGCACAACTGA 59.641 45.455 0.00 0.00 0.00 3.41
2556 4676 2.360165 AGCAAGGAAAAGAGCACAACTG 59.640 45.455 0.00 0.00 0.00 3.16
2557 4677 2.659428 AGCAAGGAAAAGAGCACAACT 58.341 42.857 0.00 0.00 0.00 3.16
2558 4678 3.565902 ACTAGCAAGGAAAAGAGCACAAC 59.434 43.478 0.00 0.00 0.00 3.32
2559 4679 3.815401 GACTAGCAAGGAAAAGAGCACAA 59.185 43.478 0.00 0.00 0.00 3.33
2560 4680 3.071602 AGACTAGCAAGGAAAAGAGCACA 59.928 43.478 0.00 0.00 0.00 4.57
2561 4681 3.669536 AGACTAGCAAGGAAAAGAGCAC 58.330 45.455 0.00 0.00 0.00 4.40
2562 4682 4.067896 CAAGACTAGCAAGGAAAAGAGCA 58.932 43.478 0.00 0.00 0.00 4.26
2563 4683 3.438434 CCAAGACTAGCAAGGAAAAGAGC 59.562 47.826 0.00 0.00 0.00 4.09
2564 4684 4.453819 CACCAAGACTAGCAAGGAAAAGAG 59.546 45.833 0.00 0.00 0.00 2.85
2565 4685 4.102524 TCACCAAGACTAGCAAGGAAAAGA 59.897 41.667 0.00 0.00 0.00 2.52
2566 4686 4.389374 TCACCAAGACTAGCAAGGAAAAG 58.611 43.478 0.00 0.00 0.00 2.27
2567 4687 4.102524 TCTCACCAAGACTAGCAAGGAAAA 59.897 41.667 0.00 0.00 0.00 2.29
2568 4688 3.646162 TCTCACCAAGACTAGCAAGGAAA 59.354 43.478 0.00 0.00 0.00 3.13
2569 4689 3.239449 TCTCACCAAGACTAGCAAGGAA 58.761 45.455 0.00 0.00 0.00 3.36
2570 4690 2.889512 TCTCACCAAGACTAGCAAGGA 58.110 47.619 0.00 0.00 0.00 3.36
2571 4691 3.055530 ACATCTCACCAAGACTAGCAAGG 60.056 47.826 0.00 0.00 36.65 3.61
2572 4692 3.931468 CACATCTCACCAAGACTAGCAAG 59.069 47.826 0.00 0.00 36.65 4.01
2573 4693 3.866066 GCACATCTCACCAAGACTAGCAA 60.866 47.826 0.00 0.00 36.65 3.91
2574 4694 2.354103 GCACATCTCACCAAGACTAGCA 60.354 50.000 0.00 0.00 36.65 3.49
2575 4695 2.275318 GCACATCTCACCAAGACTAGC 58.725 52.381 0.00 0.00 36.65 3.42
2576 4696 3.599730 TGCACATCTCACCAAGACTAG 57.400 47.619 0.00 0.00 36.65 2.57
2577 4697 4.223700 AGAATGCACATCTCACCAAGACTA 59.776 41.667 0.00 0.00 36.65 2.59
2578 4698 3.008813 AGAATGCACATCTCACCAAGACT 59.991 43.478 0.00 0.00 36.65 3.24
2579 4699 3.341823 AGAATGCACATCTCACCAAGAC 58.658 45.455 0.00 0.00 36.65 3.01
2580 4700 3.708403 AGAATGCACATCTCACCAAGA 57.292 42.857 0.00 0.00 38.72 3.02
2581 4701 4.008330 AGAAGAATGCACATCTCACCAAG 58.992 43.478 4.44 0.00 0.00 3.61
2582 4702 4.025040 AGAAGAATGCACATCTCACCAA 57.975 40.909 4.44 0.00 0.00 3.67
2583 4703 3.708403 AGAAGAATGCACATCTCACCA 57.292 42.857 4.44 0.00 0.00 4.17
2584 4704 4.260170 AGAAGAAGAATGCACATCTCACC 58.740 43.478 4.44 0.00 0.00 4.02
2585 4705 5.629097 CAAGAAGAAGAATGCACATCTCAC 58.371 41.667 4.44 3.27 0.00 3.51
2586 4706 4.155462 GCAAGAAGAAGAATGCACATCTCA 59.845 41.667 4.44 0.00 38.63 3.27
2587 4707 4.438472 GGCAAGAAGAAGAATGCACATCTC 60.438 45.833 4.44 0.13 40.51 2.75
2588 4708 3.442977 GGCAAGAAGAAGAATGCACATCT 59.557 43.478 0.00 0.00 40.51 2.90
2589 4709 3.442977 AGGCAAGAAGAAGAATGCACATC 59.557 43.478 0.00 0.00 40.51 3.06
2590 4710 3.428532 AGGCAAGAAGAAGAATGCACAT 58.571 40.909 0.00 0.00 40.51 3.21
2591 4711 2.816087 GAGGCAAGAAGAAGAATGCACA 59.184 45.455 0.00 0.00 40.51 4.57
2592 4712 3.080319 AGAGGCAAGAAGAAGAATGCAC 58.920 45.455 0.00 0.00 40.51 4.57
2593 4713 3.008813 AGAGAGGCAAGAAGAAGAATGCA 59.991 43.478 0.00 0.00 40.51 3.96
2594 4714 3.608796 AGAGAGGCAAGAAGAAGAATGC 58.391 45.455 0.00 0.00 38.06 3.56
2595 4715 4.829968 TGAGAGAGGCAAGAAGAAGAATG 58.170 43.478 0.00 0.00 0.00 2.67
2596 4716 4.080975 CCTGAGAGAGGCAAGAAGAAGAAT 60.081 45.833 0.00 0.00 34.01 2.40
2597 4717 3.260380 CCTGAGAGAGGCAAGAAGAAGAA 59.740 47.826 0.00 0.00 34.01 2.52
2598 4718 2.830923 CCTGAGAGAGGCAAGAAGAAGA 59.169 50.000 0.00 0.00 34.01 2.87
2599 4719 3.249986 CCTGAGAGAGGCAAGAAGAAG 57.750 52.381 0.00 0.00 34.01 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.