Multiple sequence alignment - TraesCS7A01G018600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G018600 chr7A 100.000 3837 0 0 1 3837 7823637 7827473 0.000000e+00 7086.0
1 TraesCS7A01G018600 chr7A 86.143 2100 201 58 3 2058 176233966 176231913 0.000000e+00 2183.0
2 TraesCS7A01G018600 chr7A 84.902 2093 202 79 1 2058 677874899 677872886 0.000000e+00 2010.0
3 TraesCS7A01G018600 chr7A 94.798 1288 53 10 772 2058 311245531 311244257 0.000000e+00 1995.0
4 TraesCS7A01G018600 chr7A 84.638 1367 143 47 737 2058 700479228 700477884 0.000000e+00 1299.0
5 TraesCS7A01G018600 chr7A 96.291 647 23 1 1412 2058 164184995 164184350 0.000000e+00 1061.0
6 TraesCS7A01G018600 chr7A 91.823 746 42 13 1 732 311246274 311245534 0.000000e+00 1022.0
7 TraesCS7A01G018600 chr7A 82.572 1073 114 43 1 1048 86117981 86119005 0.000000e+00 878.0
8 TraesCS7A01G018600 chr7A 90.727 550 36 11 1 540 700479935 700479391 0.000000e+00 719.0
9 TraesCS7A01G018600 chr7A 88.940 217 19 4 851 1063 708335558 708335773 2.940000e-66 263.0
10 TraesCS7A01G018600 chr6A 90.431 2090 155 30 1 2060 576382977 576380903 0.000000e+00 2710.0
11 TraesCS7A01G018600 chr6A 89.842 2087 145 38 1 2060 576175831 576173785 0.000000e+00 2617.0
12 TraesCS7A01G018600 chr6A 85.141 2093 198 72 1 2058 116961877 116959863 0.000000e+00 2037.0
13 TraesCS7A01G018600 chr3B 83.768 2107 248 63 1 2059 499091262 499093322 0.000000e+00 1910.0
14 TraesCS7A01G018600 chr3B 88.095 210 21 3 854 1059 22107726 22107935 2.960000e-61 246.0
15 TraesCS7A01G018600 chr1B 82.333 2117 235 100 8 2059 566041354 566039312 0.000000e+00 1709.0
16 TraesCS7A01G018600 chr1B 79.861 432 69 10 2918 3336 553013280 553012854 2.240000e-77 300.0
17 TraesCS7A01G018600 chr2B 82.157 2068 242 78 1 1979 30642219 30644248 0.000000e+00 1657.0
18 TraesCS7A01G018600 chr2B 75.598 627 98 40 301 892 443277708 443278314 3.800000e-65 259.0
19 TraesCS7A01G018600 chr2B 85.470 234 34 0 3010 3243 794599271 794599038 1.060000e-60 244.0
20 TraesCS7A01G018600 chr2A 87.959 1171 98 29 910 2064 102040801 102041944 0.000000e+00 1341.0
21 TraesCS7A01G018600 chr2A 88.579 1077 82 25 1 1063 714008331 714009380 0.000000e+00 1269.0
22 TraesCS7A01G018600 chr2A 84.169 878 88 33 1 834 758695477 758694607 0.000000e+00 804.0
23 TraesCS7A01G018600 chr2A 82.175 331 45 7 746 1063 27614659 27614988 4.880000e-69 272.0
24 TraesCS7A01G018600 chr5A 96.445 647 22 1 1412 2058 608960053 608960698 0.000000e+00 1066.0
25 TraesCS7A01G018600 chr5A 88.902 856 80 14 1212 2058 669759845 669760694 0.000000e+00 1040.0
26 TraesCS7A01G018600 chr5A 83.299 982 90 49 1 930 669758610 669759569 0.000000e+00 837.0
27 TraesCS7A01G018600 chr5B 84.153 732 107 7 2059 2784 543281337 543280609 0.000000e+00 701.0
28 TraesCS7A01G018600 chr5B 82.405 790 111 17 2937 3705 543280564 543279782 0.000000e+00 664.0
29 TraesCS7A01G018600 chr5B 83.801 321 47 4 2953 3269 543297740 543297421 2.240000e-77 300.0
30 TraesCS7A01G018600 chr5B 85.849 106 10 5 3015 3115 542950737 542950632 1.460000e-19 108.0
31 TraesCS7A01G018600 chr3A 87.115 357 43 2 2341 2695 13552061 13552416 5.970000e-108 401.0
32 TraesCS7A01G018600 chr4B 81.226 522 74 5 2147 2668 2206587 2207084 2.150000e-107 399.0
33 TraesCS7A01G018600 chr4B 87.815 238 28 1 2147 2383 2235996 2236233 1.050000e-70 278.0
34 TraesCS7A01G018600 chr5D 83.540 322 46 6 2953 3269 445489963 445489644 1.040000e-75 294.0
35 TraesCS7A01G018600 chr5D 89.362 94 6 2 3015 3104 445317028 445316935 8.710000e-22 115.0
36 TraesCS7A01G018600 chr1A 90.741 216 17 2 851 1063 563793646 563793431 6.270000e-73 285.0
37 TraesCS7A01G018600 chr7D 75.000 220 47 5 2279 2491 174298874 174299092 1.130000e-15 95.3
38 TraesCS7A01G018600 chr1D 73.418 158 37 4 2443 2599 18679831 18679984 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G018600 chr7A 7823637 7827473 3836 False 7086.0 7086 100.0000 1 3837 1 chr7A.!!$F1 3836
1 TraesCS7A01G018600 chr7A 176231913 176233966 2053 True 2183.0 2183 86.1430 3 2058 1 chr7A.!!$R2 2055
2 TraesCS7A01G018600 chr7A 677872886 677874899 2013 True 2010.0 2010 84.9020 1 2058 1 chr7A.!!$R3 2057
3 TraesCS7A01G018600 chr7A 311244257 311246274 2017 True 1508.5 1995 93.3105 1 2058 2 chr7A.!!$R4 2057
4 TraesCS7A01G018600 chr7A 164184350 164184995 645 True 1061.0 1061 96.2910 1412 2058 1 chr7A.!!$R1 646
5 TraesCS7A01G018600 chr7A 700477884 700479935 2051 True 1009.0 1299 87.6825 1 2058 2 chr7A.!!$R5 2057
6 TraesCS7A01G018600 chr7A 86117981 86119005 1024 False 878.0 878 82.5720 1 1048 1 chr7A.!!$F2 1047
7 TraesCS7A01G018600 chr6A 576380903 576382977 2074 True 2710.0 2710 90.4310 1 2060 1 chr6A.!!$R3 2059
8 TraesCS7A01G018600 chr6A 576173785 576175831 2046 True 2617.0 2617 89.8420 1 2060 1 chr6A.!!$R2 2059
9 TraesCS7A01G018600 chr6A 116959863 116961877 2014 True 2037.0 2037 85.1410 1 2058 1 chr6A.!!$R1 2057
10 TraesCS7A01G018600 chr3B 499091262 499093322 2060 False 1910.0 1910 83.7680 1 2059 1 chr3B.!!$F2 2058
11 TraesCS7A01G018600 chr1B 566039312 566041354 2042 True 1709.0 1709 82.3330 8 2059 1 chr1B.!!$R2 2051
12 TraesCS7A01G018600 chr2B 30642219 30644248 2029 False 1657.0 1657 82.1570 1 1979 1 chr2B.!!$F1 1978
13 TraesCS7A01G018600 chr2B 443277708 443278314 606 False 259.0 259 75.5980 301 892 1 chr2B.!!$F2 591
14 TraesCS7A01G018600 chr2A 102040801 102041944 1143 False 1341.0 1341 87.9590 910 2064 1 chr2A.!!$F2 1154
15 TraesCS7A01G018600 chr2A 714008331 714009380 1049 False 1269.0 1269 88.5790 1 1063 1 chr2A.!!$F3 1062
16 TraesCS7A01G018600 chr2A 758694607 758695477 870 True 804.0 804 84.1690 1 834 1 chr2A.!!$R1 833
17 TraesCS7A01G018600 chr5A 608960053 608960698 645 False 1066.0 1066 96.4450 1412 2058 1 chr5A.!!$F1 646
18 TraesCS7A01G018600 chr5A 669758610 669760694 2084 False 938.5 1040 86.1005 1 2058 2 chr5A.!!$F2 2057
19 TraesCS7A01G018600 chr5B 543279782 543281337 1555 True 682.5 701 83.2790 2059 3705 2 chr5B.!!$R3 1646

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 509 1.808411 TCTAGCCCAGCGAACAAAAG 58.192 50.0 0.0 0.0 0.00 2.27 F
2096 2368 0.250295 TGTGCTGGAGTTCCTTTCCG 60.250 55.0 0.0 0.0 37.54 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2183 2455 0.179124 TTGTGCCTTTTGTTGCGGAC 60.179 50.0 0.0 0.0 0.0 4.79 R
3816 4139 0.034863 GGTACATTTCTTGGGGCCGA 60.035 55.0 0.0 0.0 0.0 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
444 481 3.002759 GCTCTTTAAATTCTAGCCCAGCG 59.997 47.826 0.00 0.00 0.00 5.18
452 509 1.808411 TCTAGCCCAGCGAACAAAAG 58.192 50.000 0.00 0.00 0.00 2.27
1134 1334 5.106277 GGGATTTGACTTTTCTAGGGTTTCG 60.106 44.000 0.00 0.00 0.00 3.46
1161 1361 3.532542 GGGATTTCTAGAGTTGGGTTCG 58.467 50.000 0.00 0.00 0.00 3.95
1181 1381 2.610433 GGCTGAATTGGCAAAAGTAGC 58.390 47.619 3.01 11.76 0.00 3.58
1646 1914 4.657824 CGGTGCGAAGTCCCGTGT 62.658 66.667 0.00 0.00 37.00 4.49
1836 2105 3.190118 AGGAGTAAACCGTACGAGAACTG 59.810 47.826 18.76 0.48 34.73 3.16
2069 2341 4.578516 TCAATACCAACACCTTGTTCTGTG 59.421 41.667 0.00 0.00 38.77 3.66
2076 2348 2.504175 ACACCTTGTTCTGTGGTACTGT 59.496 45.455 0.00 0.00 36.80 3.55
2079 2351 3.054655 ACCTTGTTCTGTGGTACTGTTGT 60.055 43.478 0.00 0.00 31.50 3.32
2081 2353 2.285083 TGTTCTGTGGTACTGTTGTGC 58.715 47.619 0.00 0.00 0.00 4.57
2084 2356 1.202639 TCTGTGGTACTGTTGTGCTGG 60.203 52.381 0.00 0.00 0.00 4.85
2089 2361 2.143925 GGTACTGTTGTGCTGGAGTTC 58.856 52.381 0.00 0.00 0.00 3.01
2090 2362 2.143925 GTACTGTTGTGCTGGAGTTCC 58.856 52.381 0.00 0.00 0.00 3.62
2093 2365 2.301346 CTGTTGTGCTGGAGTTCCTTT 58.699 47.619 0.00 0.00 36.82 3.11
2096 2368 0.250295 TGTGCTGGAGTTCCTTTCCG 60.250 55.000 0.00 0.00 37.54 4.30
2097 2369 0.955919 GTGCTGGAGTTCCTTTCCGG 60.956 60.000 0.00 0.00 42.84 5.14
2099 2371 1.838073 GCTGGAGTTCCTTTCCGGGA 61.838 60.000 0.00 0.00 40.73 5.14
2100 2372 0.912486 CTGGAGTTCCTTTCCGGGAT 59.088 55.000 0.00 0.00 37.43 3.85
2111 2383 3.609853 CTTTCCGGGATCTTTCACATGA 58.390 45.455 0.00 0.00 0.00 3.07
2112 2384 2.988010 TCCGGGATCTTTCACATGAG 57.012 50.000 0.00 0.00 0.00 2.90
2115 2387 2.355108 CCGGGATCTTTCACATGAGTGT 60.355 50.000 0.00 0.00 46.01 3.55
2117 2389 4.503910 CGGGATCTTTCACATGAGTGTAA 58.496 43.478 0.00 0.00 46.01 2.41
2118 2390 5.118990 CGGGATCTTTCACATGAGTGTAAT 58.881 41.667 0.00 0.00 46.01 1.89
2119 2391 5.007039 CGGGATCTTTCACATGAGTGTAATG 59.993 44.000 0.00 0.00 46.01 1.90
2120 2392 5.882557 GGGATCTTTCACATGAGTGTAATGT 59.117 40.000 0.00 0.00 46.01 2.71
2128 2400 5.233225 CACATGAGTGTAATGTGTCTGAGT 58.767 41.667 0.00 0.00 46.39 3.41
2130 2402 5.011023 ACATGAGTGTAATGTGTCTGAGTGA 59.989 40.000 0.00 0.00 36.89 3.41
2132 2404 6.834168 TGAGTGTAATGTGTCTGAGTGATA 57.166 37.500 0.00 0.00 0.00 2.15
2134 2406 7.484140 TGAGTGTAATGTGTCTGAGTGATATC 58.516 38.462 0.00 0.00 0.00 1.63
2156 2428 2.620115 CTGATATCGCTTGGCATGGTTT 59.380 45.455 2.33 0.00 0.00 3.27
2158 2430 1.388547 TATCGCTTGGCATGGTTTCC 58.611 50.000 2.33 0.00 0.00 3.13
2171 2443 4.804261 GCATGGTTTCCCAGTATAGCCTAG 60.804 50.000 0.00 0.00 46.15 3.02
2183 2455 9.057089 CCCAGTATAGCCTAGTAAATTTCTTTG 57.943 37.037 0.00 0.00 0.00 2.77
2192 2464 5.508200 AGTAAATTTCTTTGTCCGCAACA 57.492 34.783 0.00 0.00 33.82 3.33
2202 2474 0.179124 GTCCGCAACAAAAGGCACAA 60.179 50.000 0.00 0.00 0.00 3.33
2218 2490 2.908634 CACAACAAGAAGATGTGCGTC 58.091 47.619 0.00 0.00 42.84 5.19
2245 2517 3.297134 TCCTTCAACTGCAAGGACTTT 57.703 42.857 0.00 0.00 43.84 2.66
2254 2526 3.152341 CTGCAAGGACTTTCTTGACCAT 58.848 45.455 8.56 0.00 44.98 3.55
2287 2559 5.682234 TGAAGTCATGCTCCTCATCTTTA 57.318 39.130 0.00 0.00 31.79 1.85
2288 2560 6.053632 TGAAGTCATGCTCCTCATCTTTAA 57.946 37.500 0.00 0.00 31.79 1.52
2299 2571 7.984050 TGCTCCTCATCTTTAAGAATTACAGAG 59.016 37.037 0.00 2.83 40.34 3.35
2317 2589 6.620877 ACAGAGTTGGTTCTTGGATATGTA 57.379 37.500 0.00 0.00 0.00 2.29
2326 2598 8.415950 TGGTTCTTGGATATGTAAAATGTTGT 57.584 30.769 0.00 0.00 0.00 3.32
2333 2605 6.379703 TGGATATGTAAAATGTTGTTGGGAGG 59.620 38.462 0.00 0.00 0.00 4.30
2336 2608 5.523438 TGTAAAATGTTGTTGGGAGGAAC 57.477 39.130 0.00 0.00 0.00 3.62
2338 2610 4.670896 AAAATGTTGTTGGGAGGAACAG 57.329 40.909 0.00 0.00 37.16 3.16
2349 2621 5.144159 TGGGAGGAACAGATAGTAGATGT 57.856 43.478 0.00 0.00 0.00 3.06
2359 2631 6.574350 ACAGATAGTAGATGTTGCCAGTTAC 58.426 40.000 0.00 0.00 0.00 2.50
2364 2636 3.340814 AGATGTTGCCAGTTACAGGAG 57.659 47.619 0.00 0.00 0.00 3.69
2365 2637 2.026822 AGATGTTGCCAGTTACAGGAGG 60.027 50.000 0.00 0.00 0.00 4.30
2383 2655 1.203364 AGGTTCAGTGATCAGAGGGGT 60.203 52.381 0.00 0.00 0.00 4.95
2386 2658 2.303022 GTTCAGTGATCAGAGGGGTCAA 59.697 50.000 0.00 0.00 0.00 3.18
2400 2672 2.092429 GGGGTCAATGGACTATTCAGCA 60.092 50.000 0.00 0.00 43.77 4.41
2403 2675 5.376625 GGGTCAATGGACTATTCAGCATAA 58.623 41.667 0.00 0.00 43.77 1.90
2404 2676 5.827797 GGGTCAATGGACTATTCAGCATAAA 59.172 40.000 0.00 0.00 43.77 1.40
2407 2679 6.767902 GTCAATGGACTATTCAGCATAAAGGA 59.232 38.462 0.00 0.00 40.99 3.36
2473 2745 1.701847 AGTGTCCTTCTCTGGCACATT 59.298 47.619 0.00 0.00 38.20 2.71
2502 2774 2.623416 ACTTGTGCTTCTACCAAAAGGC 59.377 45.455 0.00 0.00 32.90 4.35
2503 2775 1.616159 TGTGCTTCTACCAAAAGGCC 58.384 50.000 0.00 0.00 0.00 5.19
2516 2788 0.250901 AAAGGCCGACACATCAGCTT 60.251 50.000 0.00 0.00 0.00 3.74
2520 2792 0.950555 GCCGACACATCAGCTTGTCA 60.951 55.000 14.85 0.00 41.98 3.58
2523 2795 2.071540 CGACACATCAGCTTGTCATGT 58.928 47.619 14.85 4.70 41.98 3.21
2525 2797 3.679502 CGACACATCAGCTTGTCATGTAA 59.320 43.478 14.85 0.00 41.98 2.41
2527 2799 5.618056 ACACATCAGCTTGTCATGTAAAG 57.382 39.130 0.00 0.00 0.00 1.85
2533 2805 1.135689 GCTTGTCATGTAAAGGCCACG 60.136 52.381 5.01 0.00 0.00 4.94
2534 2806 1.468520 CTTGTCATGTAAAGGCCACGG 59.531 52.381 5.01 0.00 0.00 4.94
2535 2807 0.322098 TGTCATGTAAAGGCCACGGG 60.322 55.000 5.01 0.00 0.00 5.28
2561 2833 6.003326 TGCAGAGAAATTTCCAACTACATGA 58.997 36.000 14.61 0.00 0.00 3.07
2579 2851 9.063615 ACTACATGATATACATACTGTTCGTCA 57.936 33.333 0.00 0.00 37.46 4.35
2581 2853 8.803201 ACATGATATACATACTGTTCGTCAAG 57.197 34.615 0.00 0.00 37.46 3.02
2599 2871 1.138568 AGCCTGAGATGCTATTGCCT 58.861 50.000 0.00 0.00 37.28 4.75
2605 2877 0.816825 AGATGCTATTGCCTGGCACG 60.817 55.000 23.30 13.81 44.87 5.34
2611 2883 2.572095 TATTGCCTGGCACGAGACGG 62.572 60.000 23.30 0.00 38.71 4.79
2624 2896 2.557056 ACGAGACGGAATCTGTTCAAGA 59.443 45.455 0.00 0.00 38.00 3.02
2625 2897 3.005472 ACGAGACGGAATCTGTTCAAGAA 59.995 43.478 0.00 0.00 38.00 2.52
2629 2901 2.749621 ACGGAATCTGTTCAAGAATGCC 59.250 45.455 0.00 0.00 38.79 4.40
2632 2904 4.142315 CGGAATCTGTTCAAGAATGCCAAT 60.142 41.667 0.00 0.00 38.79 3.16
2645 2917 0.401356 TGCCAATGCTGAACTGGAGA 59.599 50.000 0.00 0.00 38.71 3.71
2647 2919 1.888512 GCCAATGCTGAACTGGAGAAA 59.111 47.619 0.00 0.00 31.38 2.52
2650 2922 4.741342 CCAATGCTGAACTGGAGAAAATC 58.259 43.478 0.00 0.00 31.38 2.17
2651 2923 7.850819 GCCAATGCTGAACTGGAGAAAATCC 62.851 48.000 0.00 0.00 40.86 3.01
2695 3000 2.806945 TGGCGATTCTCAAGGGAAAT 57.193 45.000 0.00 0.00 0.00 2.17
2696 3001 3.924114 TGGCGATTCTCAAGGGAAATA 57.076 42.857 0.00 0.00 0.00 1.40
2697 3002 4.229304 TGGCGATTCTCAAGGGAAATAA 57.771 40.909 0.00 0.00 0.00 1.40
2698 3003 4.199310 TGGCGATTCTCAAGGGAAATAAG 58.801 43.478 0.00 0.00 0.00 1.73
2699 3004 3.003793 GGCGATTCTCAAGGGAAATAAGC 59.996 47.826 0.00 0.00 0.00 3.09
2700 3005 3.003793 GCGATTCTCAAGGGAAATAAGCC 59.996 47.826 0.00 0.00 0.00 4.35
2701 3006 4.199310 CGATTCTCAAGGGAAATAAGCCA 58.801 43.478 0.00 0.00 0.00 4.75
2702 3007 4.035675 CGATTCTCAAGGGAAATAAGCCAC 59.964 45.833 0.00 0.00 0.00 5.01
2703 3008 4.657814 TTCTCAAGGGAAATAAGCCACT 57.342 40.909 0.00 0.00 0.00 4.00
2704 3009 4.222124 TCTCAAGGGAAATAAGCCACTC 57.778 45.455 0.00 0.00 0.00 3.51
2705 3010 3.054361 TCTCAAGGGAAATAAGCCACTCC 60.054 47.826 0.00 0.00 0.00 3.85
2706 3011 2.919602 TCAAGGGAAATAAGCCACTCCT 59.080 45.455 0.00 0.00 0.00 3.69
2707 3012 3.054361 TCAAGGGAAATAAGCCACTCCTC 60.054 47.826 0.00 0.00 0.00 3.71
2708 3013 2.562296 AGGGAAATAAGCCACTCCTCA 58.438 47.619 0.00 0.00 0.00 3.86
2709 3014 2.919602 AGGGAAATAAGCCACTCCTCAA 59.080 45.455 0.00 0.00 0.00 3.02
2710 3015 3.054065 AGGGAAATAAGCCACTCCTCAAG 60.054 47.826 0.00 0.00 0.00 3.02
2711 3016 3.308473 GGGAAATAAGCCACTCCTCAAGT 60.308 47.826 0.00 0.00 39.44 3.16
2712 3017 4.336280 GGAAATAAGCCACTCCTCAAGTT 58.664 43.478 0.00 0.00 35.45 2.66
2713 3018 4.396478 GGAAATAAGCCACTCCTCAAGTTC 59.604 45.833 0.00 0.00 35.45 3.01
2714 3019 3.636153 ATAAGCCACTCCTCAAGTTCC 57.364 47.619 0.00 0.00 35.45 3.62
2715 3020 1.439543 AAGCCACTCCTCAAGTTCCT 58.560 50.000 0.00 0.00 35.45 3.36
2716 3021 0.980423 AGCCACTCCTCAAGTTCCTC 59.020 55.000 0.00 0.00 35.45 3.71
2717 3022 0.687354 GCCACTCCTCAAGTTCCTCA 59.313 55.000 0.00 0.00 35.45 3.86
2718 3023 1.072331 GCCACTCCTCAAGTTCCTCAA 59.928 52.381 0.00 0.00 35.45 3.02
2719 3024 2.873649 GCCACTCCTCAAGTTCCTCAAG 60.874 54.545 0.00 0.00 35.45 3.02
2720 3025 2.289945 CCACTCCTCAAGTTCCTCAAGG 60.290 54.545 0.00 0.00 35.45 3.61
2721 3026 1.981495 ACTCCTCAAGTTCCTCAAGGG 59.019 52.381 0.00 0.00 33.03 3.95
2722 3027 2.260822 CTCCTCAAGTTCCTCAAGGGA 58.739 52.381 0.00 0.00 43.41 4.20
2733 3038 1.478631 CTCAAGGGAAAAGGGCCATC 58.521 55.000 6.18 0.11 0.00 3.51
2734 3039 0.783206 TCAAGGGAAAAGGGCCATCA 59.217 50.000 6.18 0.00 0.00 3.07
2741 3046 0.040204 AAAAGGGCCATCACCTGAGG 59.960 55.000 6.18 0.00 38.63 3.86
2744 3049 2.750657 GGGCCATCACCTGAGGAGG 61.751 68.421 4.99 2.39 46.21 4.30
2745 3050 2.191641 GCCATCACCTGAGGAGGC 59.808 66.667 4.99 9.38 44.33 4.70
2766 3071 3.627577 GCTGAAAGAAGACTTGTGGACAA 59.372 43.478 0.00 0.00 36.39 3.18
2767 3072 4.096382 GCTGAAAGAAGACTTGTGGACAAA 59.904 41.667 0.00 0.00 36.39 2.83
2775 3080 6.710744 AGAAGACTTGTGGACAAAATAATCGT 59.289 34.615 0.00 0.00 35.15 3.73
2780 3085 6.262273 ACTTGTGGACAAAATAATCGTCAAGT 59.738 34.615 0.00 0.00 36.04 3.16
2784 3089 4.553429 GGACAAAATAATCGTCAAGTTGCG 59.447 41.667 11.79 11.79 0.00 4.85
2785 3090 4.472286 ACAAAATAATCGTCAAGTTGCGG 58.528 39.130 16.09 3.86 0.00 5.69
2787 3092 0.650512 ATAATCGTCAAGTTGCGGCG 59.349 50.000 16.09 0.51 0.00 6.46
2788 3093 1.962092 TAATCGTCAAGTTGCGGCGC 61.962 55.000 27.44 27.44 0.00 6.53
2792 3097 3.648982 TCAAGTTGCGGCGCACAG 61.649 61.111 36.57 23.10 38.71 3.66
2796 3101 2.462255 AAGTTGCGGCGCACAGAATG 62.462 55.000 36.57 0.00 38.71 2.67
2809 3114 4.933505 CACAGAATGCAGAGAGGATCTA 57.066 45.455 0.00 0.00 45.34 1.98
2811 3116 3.896888 ACAGAATGCAGAGAGGATCTAGG 59.103 47.826 0.00 0.00 45.34 3.02
2813 3118 5.696313 ACAGAATGCAGAGAGGATCTAGGAT 60.696 44.000 0.00 0.00 45.34 3.24
2814 3119 7.701579 ACAGAATGCAGAGAGGATCTAGGATG 61.702 46.154 0.00 0.00 45.34 3.51
2821 3126 1.964223 GAGGATCTAGGATGCACGGAA 59.036 52.381 0.00 0.00 0.00 4.30
2822 3127 1.689273 AGGATCTAGGATGCACGGAAC 59.311 52.381 0.00 0.00 0.00 3.62
2823 3128 1.270358 GGATCTAGGATGCACGGAACC 60.270 57.143 0.00 0.00 0.00 3.62
2825 3130 1.883084 CTAGGATGCACGGAACCGC 60.883 63.158 13.32 0.00 44.19 5.68
2828 3133 3.799755 GATGCACGGAACCGCCAC 61.800 66.667 13.32 3.72 44.19 5.01
2840 3145 2.892640 CGCCACCGGATTGAGAGA 59.107 61.111 9.46 0.00 0.00 3.10
2841 3146 1.227089 CGCCACCGGATTGAGAGAG 60.227 63.158 9.46 0.00 0.00 3.20
2842 3147 1.144936 GCCACCGGATTGAGAGAGG 59.855 63.158 9.46 0.00 0.00 3.69
2843 3148 1.144936 CCACCGGATTGAGAGAGGC 59.855 63.158 9.46 0.00 0.00 4.70
2844 3149 1.617018 CCACCGGATTGAGAGAGGCA 61.617 60.000 9.46 0.00 0.00 4.75
2845 3150 0.467384 CACCGGATTGAGAGAGGCAT 59.533 55.000 9.46 0.00 0.00 4.40
2846 3151 0.755686 ACCGGATTGAGAGAGGCATC 59.244 55.000 9.46 0.00 0.00 3.91
2847 3152 0.034616 CCGGATTGAGAGAGGCATCC 59.965 60.000 0.00 0.00 0.00 3.51
2848 3153 0.319383 CGGATTGAGAGAGGCATCCG 60.319 60.000 5.13 5.13 43.74 4.18
2849 3154 1.043816 GGATTGAGAGAGGCATCCGA 58.956 55.000 0.00 0.00 0.00 4.55
2850 3155 1.270041 GGATTGAGAGAGGCATCCGAC 60.270 57.143 0.00 0.00 0.00 4.79
2851 3156 1.686052 GATTGAGAGAGGCATCCGACT 59.314 52.381 0.00 0.00 0.00 4.18
2852 3157 0.820226 TTGAGAGAGGCATCCGACTG 59.180 55.000 0.00 0.00 0.00 3.51
2853 3158 1.067250 GAGAGAGGCATCCGACTGC 59.933 63.158 0.00 1.03 41.53 4.40
2854 3159 1.381056 AGAGAGGCATCCGACTGCT 60.381 57.895 8.71 0.00 41.95 4.24
2855 3160 1.067250 GAGAGGCATCCGACTGCTC 59.933 63.158 8.71 5.31 41.95 4.26
2856 3161 2.279120 GAGGCATCCGACTGCTCG 60.279 66.667 8.71 0.00 41.95 5.03
2864 3169 2.657237 CGACTGCTCGGGAAGGTT 59.343 61.111 0.00 0.00 36.16 3.50
2865 3170 1.446272 CGACTGCTCGGGAAGGTTC 60.446 63.158 0.00 0.00 36.16 3.62
2866 3171 1.079057 GACTGCTCGGGAAGGTTCC 60.079 63.158 0.00 0.00 46.82 3.62
2878 3183 2.820197 GGAAGGTTCCATTCACAAGACC 59.180 50.000 3.73 0.00 46.76 3.85
2879 3184 3.498661 GGAAGGTTCCATTCACAAGACCT 60.499 47.826 3.73 0.00 46.76 3.85
2880 3185 3.146104 AGGTTCCATTCACAAGACCTG 57.854 47.619 0.00 0.00 36.23 4.00
2881 3186 2.162681 GGTTCCATTCACAAGACCTGG 58.837 52.381 0.00 0.00 0.00 4.45
2882 3187 1.541588 GTTCCATTCACAAGACCTGGC 59.458 52.381 0.00 0.00 30.40 4.85
2883 3188 0.770499 TCCATTCACAAGACCTGGCA 59.230 50.000 0.00 0.00 30.40 4.92
2884 3189 1.171308 CCATTCACAAGACCTGGCAG 58.829 55.000 7.75 7.75 0.00 4.85
2885 3190 0.524862 CATTCACAAGACCTGGCAGC 59.475 55.000 9.56 0.00 0.00 5.25
2886 3191 0.403271 ATTCACAAGACCTGGCAGCT 59.597 50.000 9.56 0.00 0.00 4.24
2887 3192 0.183492 TTCACAAGACCTGGCAGCTT 59.817 50.000 9.56 5.20 0.00 3.74
2888 3193 0.183492 TCACAAGACCTGGCAGCTTT 59.817 50.000 9.56 0.00 0.00 3.51
2889 3194 1.035139 CACAAGACCTGGCAGCTTTT 58.965 50.000 9.56 0.00 0.00 2.27
2890 3195 1.410153 CACAAGACCTGGCAGCTTTTT 59.590 47.619 9.56 0.00 0.00 1.94
2891 3196 2.622942 CACAAGACCTGGCAGCTTTTTA 59.377 45.455 9.56 0.00 0.00 1.52
2892 3197 3.068024 CACAAGACCTGGCAGCTTTTTAA 59.932 43.478 9.56 0.00 0.00 1.52
2893 3198 3.319122 ACAAGACCTGGCAGCTTTTTAAG 59.681 43.478 9.56 0.00 0.00 1.85
2894 3199 3.229697 AGACCTGGCAGCTTTTTAAGT 57.770 42.857 9.56 0.00 0.00 2.24
2895 3200 3.149981 AGACCTGGCAGCTTTTTAAGTC 58.850 45.455 9.56 8.49 0.00 3.01
2896 3201 2.884639 GACCTGGCAGCTTTTTAAGTCA 59.115 45.455 9.56 0.00 0.00 3.41
2897 3202 3.295973 ACCTGGCAGCTTTTTAAGTCAA 58.704 40.909 9.56 0.00 0.00 3.18
2898 3203 3.897505 ACCTGGCAGCTTTTTAAGTCAAT 59.102 39.130 9.56 0.00 0.00 2.57
2899 3204 4.240096 CCTGGCAGCTTTTTAAGTCAATG 58.760 43.478 9.56 0.00 0.00 2.82
2900 3205 3.652274 TGGCAGCTTTTTAAGTCAATGC 58.348 40.909 0.00 0.00 0.00 3.56
2901 3206 3.321682 TGGCAGCTTTTTAAGTCAATGCT 59.678 39.130 0.00 0.00 35.57 3.79
2902 3207 4.202243 TGGCAGCTTTTTAAGTCAATGCTT 60.202 37.500 0.00 0.00 33.55 3.91
2903 3208 4.386954 GGCAGCTTTTTAAGTCAATGCTTC 59.613 41.667 0.00 0.00 33.55 3.86
2904 3209 4.984161 GCAGCTTTTTAAGTCAATGCTTCA 59.016 37.500 0.00 0.00 33.55 3.02
2905 3210 5.107722 GCAGCTTTTTAAGTCAATGCTTCAC 60.108 40.000 0.00 0.00 33.55 3.18
2906 3211 5.978919 CAGCTTTTTAAGTCAATGCTTCACA 59.021 36.000 0.00 0.00 33.55 3.58
2907 3212 6.643770 CAGCTTTTTAAGTCAATGCTTCACAT 59.356 34.615 0.00 0.00 42.30 3.21
2908 3213 7.809331 CAGCTTTTTAAGTCAATGCTTCACATA 59.191 33.333 0.00 0.00 38.34 2.29
2909 3214 8.526147 AGCTTTTTAAGTCAATGCTTCACATAT 58.474 29.630 0.00 0.00 38.34 1.78
2910 3215 9.787532 GCTTTTTAAGTCAATGCTTCACATATA 57.212 29.630 0.00 0.00 38.34 0.86
2917 3222 9.630098 AAGTCAATGCTTCACATATACTTTTTG 57.370 29.630 0.00 0.00 39.23 2.44
2918 3223 7.756722 AGTCAATGCTTCACATATACTTTTTGC 59.243 33.333 0.00 0.00 38.34 3.68
2919 3224 7.009540 GTCAATGCTTCACATATACTTTTTGCC 59.990 37.037 0.00 0.00 38.34 4.52
2920 3225 6.780457 ATGCTTCACATATACTTTTTGCCT 57.220 33.333 0.00 0.00 37.17 4.75
2921 3226 5.953183 TGCTTCACATATACTTTTTGCCTG 58.047 37.500 0.00 0.00 0.00 4.85
2922 3227 5.709631 TGCTTCACATATACTTTTTGCCTGA 59.290 36.000 0.00 0.00 0.00 3.86
2923 3228 6.377996 TGCTTCACATATACTTTTTGCCTGAT 59.622 34.615 0.00 0.00 0.00 2.90
2924 3229 6.694411 GCTTCACATATACTTTTTGCCTGATG 59.306 38.462 0.00 0.00 0.00 3.07
2925 3230 6.135290 TCACATATACTTTTTGCCTGATGC 57.865 37.500 0.00 0.00 41.77 3.91
2951 3256 2.338577 ATATCCAGCTGCACAGGAAC 57.661 50.000 8.66 0.00 37.52 3.62
2965 3270 4.096382 GCACAGGAACGTTTTATCCATGAT 59.904 41.667 0.46 0.00 38.23 2.45
2969 3274 3.632145 GGAACGTTTTATCCATGATGCCT 59.368 43.478 0.46 0.00 35.71 4.75
2984 3289 4.665451 TGATGCCTGGAAGATTTCTGAAA 58.335 39.130 5.15 5.15 34.07 2.69
2986 3291 5.126545 TGATGCCTGGAAGATTTCTGAAATG 59.873 40.000 19.59 5.37 34.07 2.32
2994 3299 6.979817 TGGAAGATTTCTGAAATGTTGTTGTG 59.020 34.615 24.67 0.00 34.87 3.33
3001 3306 4.221703 TCTGAAATGTTGTTGTGTTTGGGT 59.778 37.500 0.00 0.00 0.00 4.51
3017 3322 1.561076 TGGGTGATGAGAAGATGTGGG 59.439 52.381 0.00 0.00 0.00 4.61
3026 3331 1.759445 AGAAGATGTGGGAGGTGATCG 59.241 52.381 0.00 0.00 0.00 3.69
3046 3351 1.906574 GAAGGTGTGTGGGTGGAGATA 59.093 52.381 0.00 0.00 0.00 1.98
3058 3363 2.034053 GGTGGAGATACTCTGCTTCTCG 59.966 54.545 0.00 0.00 37.38 4.04
3076 3381 4.162690 GCCAGTAGGTGCCGAGGG 62.163 72.222 0.00 0.00 37.19 4.30
3078 3383 1.380785 CCAGTAGGTGCCGAGGGTA 60.381 63.158 0.00 0.00 0.00 3.69
3125 3430 1.517361 CGGGAGCTGCTCACACATA 59.483 57.895 29.46 0.00 32.66 2.29
3127 3432 1.871408 CGGGAGCTGCTCACACATATC 60.871 57.143 29.46 10.71 32.66 1.63
3169 3474 2.285368 ATGGAGACCCTGCCGGAA 60.285 61.111 5.05 0.00 34.64 4.30
3187 3492 1.832366 GAAAGGGTACAGAGGAGGGAC 59.168 57.143 0.00 0.00 0.00 4.46
3203 3508 2.113777 AGGGACCTTTCTAGTGGAGGAA 59.886 50.000 13.30 0.00 34.61 3.36
3210 3515 4.998033 CCTTTCTAGTGGAGGAAGAAACAC 59.002 45.833 3.65 0.00 42.89 3.32
3211 3516 4.618920 TTCTAGTGGAGGAAGAAACACC 57.381 45.455 0.00 0.00 34.50 4.16
3214 3519 1.072505 TGGAGGAAGAAACACCGGC 59.927 57.895 0.00 0.00 0.00 6.13
3217 3522 3.733960 GGAAGAAACACCGGCGCC 61.734 66.667 19.07 19.07 0.00 6.53
3218 3523 2.975799 GAAGAAACACCGGCGCCA 60.976 61.111 28.98 0.00 0.00 5.69
3234 3539 3.691342 CACTCCGCCGTCTTCCCA 61.691 66.667 0.00 0.00 0.00 4.37
3236 3541 3.068691 CTCCGCCGTCTTCCCAGA 61.069 66.667 0.00 0.00 0.00 3.86
3243 3548 0.460987 CCGTCTTCCCAGATCAGCAC 60.461 60.000 0.00 0.00 0.00 4.40
3245 3550 0.908198 GTCTTCCCAGATCAGCACCT 59.092 55.000 0.00 0.00 0.00 4.00
3252 3557 0.612229 CAGATCAGCACCTCCACTGT 59.388 55.000 0.00 0.00 35.37 3.55
3269 3574 2.154462 CTGTGGAGGACATGGTTTGAC 58.846 52.381 0.00 0.00 32.74 3.18
3271 3576 0.036164 TGGAGGACATGGTTTGACCG 59.964 55.000 0.00 0.00 43.88 4.79
3275 3580 0.596082 GGACATGGTTTGACCGTTGG 59.404 55.000 0.00 0.00 42.58 3.77
3294 3599 5.402398 GTTGGTGCTTATGAAGACCATTTC 58.598 41.667 0.00 0.00 38.00 2.17
3295 3600 4.922206 TGGTGCTTATGAAGACCATTTCT 58.078 39.130 0.00 0.00 35.34 2.52
3299 3604 3.561725 GCTTATGAAGACCATTTCTCCCG 59.438 47.826 0.00 0.00 36.71 5.14
3300 3605 2.044123 ATGAAGACCATTTCTCCCGC 57.956 50.000 0.00 0.00 31.02 6.13
3301 3606 0.391130 TGAAGACCATTTCTCCCGCG 60.391 55.000 0.00 0.00 31.02 6.46
3302 3607 1.706287 GAAGACCATTTCTCCCGCGC 61.706 60.000 0.00 0.00 31.02 6.86
3304 3609 2.125106 ACCATTTCTCCCGCGCTC 60.125 61.111 5.56 0.00 0.00 5.03
3305 3610 2.187946 CCATTTCTCCCGCGCTCT 59.812 61.111 5.56 0.00 0.00 4.09
3306 3611 1.884926 CCATTTCTCCCGCGCTCTC 60.885 63.158 5.56 0.00 0.00 3.20
3308 3613 0.740868 CATTTCTCCCGCGCTCTCAA 60.741 55.000 5.56 0.00 0.00 3.02
3309 3614 0.741221 ATTTCTCCCGCGCTCTCAAC 60.741 55.000 5.56 0.00 0.00 3.18
3313 3618 1.945354 CTCCCGCGCTCTCAACCTTA 61.945 60.000 5.56 0.00 0.00 2.69
3315 3620 1.215647 CCGCGCTCTCAACCTTAGT 59.784 57.895 5.56 0.00 0.00 2.24
3317 3622 0.992802 CGCGCTCTCAACCTTAGTTC 59.007 55.000 5.56 0.00 32.45 3.01
3328 3633 6.590292 TCTCAACCTTAGTTCTCGCTTATTTG 59.410 38.462 0.00 0.00 32.45 2.32
3333 3638 7.048512 ACCTTAGTTCTCGCTTATTTGCTTAT 58.951 34.615 0.00 0.00 0.00 1.73
3338 3643 7.217200 AGTTCTCGCTTATTTGCTTATCCATA 58.783 34.615 0.00 0.00 0.00 2.74
3339 3644 7.171678 AGTTCTCGCTTATTTGCTTATCCATAC 59.828 37.037 0.00 0.00 0.00 2.39
3340 3645 6.521162 TCTCGCTTATTTGCTTATCCATACA 58.479 36.000 0.00 0.00 0.00 2.29
3357 3662 7.447374 TCCATACAGGACTTTGTATTGTTTG 57.553 36.000 0.00 0.00 43.07 2.93
3358 3663 7.001674 TCCATACAGGACTTTGTATTGTTTGT 58.998 34.615 0.00 0.00 43.07 2.83
3359 3664 7.040755 TCCATACAGGACTTTGTATTGTTTGTG 60.041 37.037 0.00 0.00 43.07 3.33
3360 3665 7.255451 CCATACAGGACTTTGTATTGTTTGTGT 60.255 37.037 0.00 0.00 41.17 3.72
3361 3666 8.779303 CATACAGGACTTTGTATTGTTTGTGTA 58.221 33.333 0.00 0.00 41.17 2.90
3362 3667 7.817418 ACAGGACTTTGTATTGTTTGTGTAT 57.183 32.000 0.00 0.00 0.00 2.29
3363 3668 7.871853 ACAGGACTTTGTATTGTTTGTGTATC 58.128 34.615 0.00 0.00 0.00 2.24
3364 3669 7.719633 ACAGGACTTTGTATTGTTTGTGTATCT 59.280 33.333 0.00 0.00 0.00 1.98
3365 3670 8.567948 CAGGACTTTGTATTGTTTGTGTATCTT 58.432 33.333 0.00 0.00 0.00 2.40
3367 3672 8.564574 GGACTTTGTATTGTTTGTGTATCTTGA 58.435 33.333 0.00 0.00 0.00 3.02
3369 3674 9.897744 ACTTTGTATTGTTTGTGTATCTTGATG 57.102 29.630 0.00 0.00 0.00 3.07
3370 3675 9.897744 CTTTGTATTGTTTGTGTATCTTGATGT 57.102 29.630 0.00 0.00 0.00 3.06
3372 3677 8.389779 TGTATTGTTTGTGTATCTTGATGTGT 57.610 30.769 0.00 0.00 0.00 3.72
3373 3678 8.845227 TGTATTGTTTGTGTATCTTGATGTGTT 58.155 29.630 0.00 0.00 0.00 3.32
3374 3679 9.117145 GTATTGTTTGTGTATCTTGATGTGTTG 57.883 33.333 0.00 0.00 0.00 3.33
3376 3681 7.094508 TGTTTGTGTATCTTGATGTGTTGTT 57.905 32.000 0.00 0.00 0.00 2.83
3380 3685 9.891828 TTTGTGTATCTTGATGTGTTGTTTATC 57.108 29.630 0.00 0.00 0.00 1.75
3381 3686 7.738345 TGTGTATCTTGATGTGTTGTTTATCG 58.262 34.615 0.00 0.00 0.00 2.92
3383 3688 4.678509 TCTTGATGTGTTGTTTATCGGC 57.321 40.909 0.00 0.00 0.00 5.54
3384 3689 3.124466 TCTTGATGTGTTGTTTATCGGCG 59.876 43.478 0.00 0.00 0.00 6.46
3395 3716 2.486951 TTATCGGCGTGCTTCTCTAC 57.513 50.000 6.85 0.00 0.00 2.59
3396 3717 0.666913 TATCGGCGTGCTTCTCTACC 59.333 55.000 6.85 0.00 0.00 3.18
3397 3718 1.320344 ATCGGCGTGCTTCTCTACCA 61.320 55.000 6.85 0.00 0.00 3.25
3400 3721 1.009829 GGCGTGCTTCTCTACCATTG 58.990 55.000 0.00 0.00 0.00 2.82
3414 3735 7.732025 TCTCTACCATTGTTGTTCTTCAGTTA 58.268 34.615 0.00 0.00 0.00 2.24
3452 3773 8.867112 TCTAAGCCTGTATGTTTCTTATTACG 57.133 34.615 0.00 0.00 0.00 3.18
3473 3794 2.125512 GCTACCAGTCTGCCACCG 60.126 66.667 0.00 0.00 0.00 4.94
3485 3806 1.263217 CTGCCACCGTGTTTGTAAGAC 59.737 52.381 0.00 0.00 0.00 3.01
3490 3811 1.764134 ACCGTGTTTGTAAGACTGGGA 59.236 47.619 0.00 0.00 0.00 4.37
3497 3818 3.587797 TTGTAAGACTGGGATCGTGAC 57.412 47.619 0.00 0.00 0.00 3.67
3498 3819 2.521126 TGTAAGACTGGGATCGTGACA 58.479 47.619 0.00 0.00 0.00 3.58
3506 3827 2.674852 CTGGGATCGTGACAGTCATTTG 59.325 50.000 6.51 0.29 0.00 2.32
3511 3832 3.811722 TCGTGACAGTCATTTGAATGC 57.188 42.857 6.51 2.56 43.21 3.56
3542 3863 7.792374 AGCCTGTTAATGTAATGTATCACTG 57.208 36.000 0.00 0.00 0.00 3.66
3544 3865 6.038161 GCCTGTTAATGTAATGTATCACTGCA 59.962 38.462 0.00 0.00 0.00 4.41
3554 3875 5.835113 ATGTATCACTGCAACCCAAATAC 57.165 39.130 0.00 0.00 0.00 1.89
3563 3884 3.900601 TGCAACCCAAATACCAGAATTGT 59.099 39.130 0.00 0.00 0.00 2.71
3580 3901 3.708563 TTGTAGTGCTGTTTTCCTTGC 57.291 42.857 0.00 0.00 0.00 4.01
3582 3903 4.079980 TGTAGTGCTGTTTTCCTTGCTA 57.920 40.909 0.00 0.00 0.00 3.49
3584 3905 5.070001 TGTAGTGCTGTTTTCCTTGCTAAT 58.930 37.500 0.00 0.00 0.00 1.73
3585 3906 4.510038 AGTGCTGTTTTCCTTGCTAATG 57.490 40.909 0.00 0.00 0.00 1.90
3586 3907 3.891366 AGTGCTGTTTTCCTTGCTAATGT 59.109 39.130 0.00 0.00 0.00 2.71
3587 3908 4.022849 AGTGCTGTTTTCCTTGCTAATGTC 60.023 41.667 0.00 0.00 0.00 3.06
3588 3909 3.058293 TGCTGTTTTCCTTGCTAATGTCG 60.058 43.478 0.00 0.00 0.00 4.35
3589 3910 3.188460 GCTGTTTTCCTTGCTAATGTCGA 59.812 43.478 0.00 0.00 0.00 4.20
3590 3911 4.142600 GCTGTTTTCCTTGCTAATGTCGAT 60.143 41.667 0.00 0.00 0.00 3.59
3591 3912 5.295431 TGTTTTCCTTGCTAATGTCGATG 57.705 39.130 0.00 0.00 0.00 3.84
3597 3919 4.811024 TCCTTGCTAATGTCGATGATTGTC 59.189 41.667 0.00 0.00 0.00 3.18
3598 3920 4.024556 CCTTGCTAATGTCGATGATTGTCC 60.025 45.833 0.00 0.00 0.00 4.02
3602 3924 2.225068 ATGTCGATGATTGTCCCGTC 57.775 50.000 0.00 0.00 0.00 4.79
3610 3932 3.159353 TGATTGTCCCGTCGATTACTG 57.841 47.619 0.00 0.00 0.00 2.74
3617 3939 1.444836 CCGTCGATTACTGCCCAAAA 58.555 50.000 0.00 0.00 0.00 2.44
3618 3940 1.129811 CCGTCGATTACTGCCCAAAAC 59.870 52.381 0.00 0.00 0.00 2.43
3624 3946 3.252215 CGATTACTGCCCAAAACAAGTGA 59.748 43.478 0.00 0.00 0.00 3.41
3625 3947 4.082787 CGATTACTGCCCAAAACAAGTGAT 60.083 41.667 0.00 0.00 0.00 3.06
3664 3986 5.469373 TTTATACGATTTCTGCTGCAGTG 57.531 39.130 27.24 15.68 32.61 3.66
3667 3989 2.766313 ACGATTTCTGCTGCAGTGTTA 58.234 42.857 27.24 12.61 32.61 2.41
3671 3993 1.783284 TTCTGCTGCAGTGTTACTCG 58.217 50.000 27.24 1.44 32.61 4.18
3677 4000 2.590073 CTGCAGTGTTACTCGACTCAG 58.410 52.381 5.25 0.00 0.00 3.35
3681 4004 4.939439 TGCAGTGTTACTCGACTCAGTATA 59.061 41.667 0.00 0.00 0.00 1.47
3690 4013 5.247084 ACTCGACTCAGTATACAGAGTGTT 58.753 41.667 29.24 10.42 41.81 3.32
3705 4028 1.003580 AGTGTTCGATGATGCCAAGGT 59.996 47.619 0.00 0.00 0.00 3.50
3706 4029 1.812571 GTGTTCGATGATGCCAAGGTT 59.187 47.619 0.00 0.00 0.00 3.50
3707 4030 3.006940 GTGTTCGATGATGCCAAGGTTA 58.993 45.455 0.00 0.00 0.00 2.85
3708 4031 3.438781 GTGTTCGATGATGCCAAGGTTAA 59.561 43.478 0.00 0.00 0.00 2.01
3709 4032 3.438781 TGTTCGATGATGCCAAGGTTAAC 59.561 43.478 0.00 0.00 0.00 2.01
3710 4033 2.639065 TCGATGATGCCAAGGTTAACC 58.361 47.619 17.41 17.41 0.00 2.85
3711 4034 2.026729 TCGATGATGCCAAGGTTAACCA 60.027 45.455 26.26 5.71 38.89 3.67
3712 4035 2.951642 CGATGATGCCAAGGTTAACCAT 59.048 45.455 26.26 12.39 38.89 3.55
3713 4036 3.243168 CGATGATGCCAAGGTTAACCATG 60.243 47.826 26.26 23.28 38.89 3.66
3714 4037 3.168035 TGATGCCAAGGTTAACCATGT 57.832 42.857 26.26 9.16 38.89 3.21
3715 4038 2.824936 TGATGCCAAGGTTAACCATGTG 59.175 45.455 26.26 18.96 38.89 3.21
3716 4039 2.666272 TGCCAAGGTTAACCATGTGA 57.334 45.000 26.26 10.23 38.89 3.58
3717 4040 2.950781 TGCCAAGGTTAACCATGTGAA 58.049 42.857 26.26 10.59 38.89 3.18
3718 4041 3.505386 TGCCAAGGTTAACCATGTGAAT 58.495 40.909 26.26 0.59 38.89 2.57
3719 4042 4.667573 TGCCAAGGTTAACCATGTGAATA 58.332 39.130 26.26 6.13 38.89 1.75
3720 4043 5.268387 TGCCAAGGTTAACCATGTGAATAT 58.732 37.500 26.26 0.00 38.89 1.28
3721 4044 5.359576 TGCCAAGGTTAACCATGTGAATATC 59.640 40.000 26.26 7.73 38.89 1.63
3722 4045 5.359576 GCCAAGGTTAACCATGTGAATATCA 59.640 40.000 26.26 0.00 38.89 2.15
3723 4046 6.460123 GCCAAGGTTAACCATGTGAATATCAG 60.460 42.308 26.26 9.50 38.89 2.90
3724 4047 6.828273 CCAAGGTTAACCATGTGAATATCAGA 59.172 38.462 26.26 0.00 38.89 3.27
3725 4048 7.503566 CCAAGGTTAACCATGTGAATATCAGAT 59.496 37.037 26.26 0.00 38.89 2.90
3726 4049 9.559732 CAAGGTTAACCATGTGAATATCAGATA 57.440 33.333 26.26 0.00 38.89 1.98
3727 4050 9.784531 AAGGTTAACCATGTGAATATCAGATAG 57.215 33.333 26.26 0.00 38.89 2.08
3728 4051 9.159254 AGGTTAACCATGTGAATATCAGATAGA 57.841 33.333 26.26 0.00 38.89 1.98
3729 4052 9.950496 GGTTAACCATGTGAATATCAGATAGAT 57.050 33.333 20.12 0.00 37.04 1.98
3731 4054 9.948964 TTAACCATGTGAATATCAGATAGATGG 57.051 33.333 5.78 5.78 37.57 3.51
3732 4055 7.803487 ACCATGTGAATATCAGATAGATGGA 57.197 36.000 12.15 0.00 37.57 3.41
3733 4056 8.211030 ACCATGTGAATATCAGATAGATGGAA 57.789 34.615 12.15 0.00 37.57 3.53
3734 4057 8.833734 ACCATGTGAATATCAGATAGATGGAAT 58.166 33.333 12.15 0.00 37.57 3.01
3735 4058 9.110502 CCATGTGAATATCAGATAGATGGAATG 57.889 37.037 2.14 0.27 37.57 2.67
3736 4059 9.110502 CATGTGAATATCAGATAGATGGAATGG 57.889 37.037 0.00 0.00 37.57 3.16
3737 4060 7.627311 TGTGAATATCAGATAGATGGAATGGG 58.373 38.462 0.00 0.00 37.57 4.00
3738 4061 7.458806 TGTGAATATCAGATAGATGGAATGGGA 59.541 37.037 0.00 0.00 37.57 4.37
3739 4062 8.492782 GTGAATATCAGATAGATGGAATGGGAT 58.507 37.037 0.00 0.00 37.57 3.85
3740 4063 8.491958 TGAATATCAGATAGATGGAATGGGATG 58.508 37.037 0.00 0.00 37.57 3.51
3741 4064 5.712084 ATCAGATAGATGGAATGGGATGG 57.288 43.478 0.00 0.00 35.06 3.51
3742 4065 4.766768 TCAGATAGATGGAATGGGATGGA 58.233 43.478 0.00 0.00 0.00 3.41
3743 4066 5.164897 TCAGATAGATGGAATGGGATGGAA 58.835 41.667 0.00 0.00 0.00 3.53
3744 4067 5.250082 TCAGATAGATGGAATGGGATGGAAG 59.750 44.000 0.00 0.00 0.00 3.46
3745 4068 5.250082 CAGATAGATGGAATGGGATGGAAGA 59.750 44.000 0.00 0.00 0.00 2.87
3746 4069 5.488203 AGATAGATGGAATGGGATGGAAGAG 59.512 44.000 0.00 0.00 0.00 2.85
3747 4070 2.107901 AGATGGAATGGGATGGAAGAGC 59.892 50.000 0.00 0.00 0.00 4.09
3748 4071 1.600058 TGGAATGGGATGGAAGAGCT 58.400 50.000 0.00 0.00 0.00 4.09
3749 4072 1.925255 TGGAATGGGATGGAAGAGCTT 59.075 47.619 0.00 0.00 0.00 3.74
3750 4073 2.305009 GGAATGGGATGGAAGAGCTTG 58.695 52.381 0.00 0.00 0.00 4.01
3751 4074 2.305009 GAATGGGATGGAAGAGCTTGG 58.695 52.381 0.00 0.00 0.00 3.61
3752 4075 0.106318 ATGGGATGGAAGAGCTTGGC 60.106 55.000 0.00 0.00 0.00 4.52
3753 4076 1.454663 GGGATGGAAGAGCTTGGCC 60.455 63.158 0.00 0.00 0.00 5.36
3754 4077 1.821332 GGATGGAAGAGCTTGGCCG 60.821 63.158 0.00 0.00 0.00 6.13
3755 4078 1.221840 GATGGAAGAGCTTGGCCGA 59.778 57.895 0.00 0.00 0.00 5.54
3756 4079 1.078143 ATGGAAGAGCTTGGCCGAC 60.078 57.895 0.00 0.00 0.00 4.79
3757 4080 1.841302 ATGGAAGAGCTTGGCCGACA 61.841 55.000 0.00 0.00 0.00 4.35
3758 4081 1.302511 GGAAGAGCTTGGCCGACAA 60.303 57.895 0.00 0.00 37.55 3.18
3759 4082 1.578206 GGAAGAGCTTGGCCGACAAC 61.578 60.000 0.00 0.00 34.76 3.32
3760 4083 0.884704 GAAGAGCTTGGCCGACAACA 60.885 55.000 0.00 0.00 34.76 3.33
3761 4084 0.886490 AAGAGCTTGGCCGACAACAG 60.886 55.000 0.00 0.00 34.76 3.16
3762 4085 2.281761 AGCTTGGCCGACAACAGG 60.282 61.111 0.00 0.00 34.76 4.00
3771 4094 2.093306 CCGACAACAGGCTTCATACA 57.907 50.000 0.00 0.00 0.00 2.29
3772 4095 1.732259 CCGACAACAGGCTTCATACAC 59.268 52.381 0.00 0.00 0.00 2.90
3773 4096 2.612972 CCGACAACAGGCTTCATACACT 60.613 50.000 0.00 0.00 0.00 3.55
3774 4097 2.413112 CGACAACAGGCTTCATACACTG 59.587 50.000 0.00 0.00 37.01 3.66
3775 4098 2.744202 GACAACAGGCTTCATACACTGG 59.256 50.000 0.00 0.00 35.34 4.00
3776 4099 2.371841 ACAACAGGCTTCATACACTGGA 59.628 45.455 0.00 0.00 35.34 3.86
3777 4100 3.005554 CAACAGGCTTCATACACTGGAG 58.994 50.000 0.00 0.00 35.34 3.86
3778 4101 2.540383 ACAGGCTTCATACACTGGAGA 58.460 47.619 0.00 0.00 31.23 3.71
3779 4102 3.110705 ACAGGCTTCATACACTGGAGAT 58.889 45.455 0.00 0.00 31.23 2.75
3780 4103 3.521126 ACAGGCTTCATACACTGGAGATT 59.479 43.478 0.00 0.00 31.23 2.40
3781 4104 4.018960 ACAGGCTTCATACACTGGAGATTT 60.019 41.667 0.00 0.00 31.23 2.17
3782 4105 4.574013 CAGGCTTCATACACTGGAGATTTC 59.426 45.833 0.00 0.00 31.23 2.17
3783 4106 4.225942 AGGCTTCATACACTGGAGATTTCA 59.774 41.667 0.00 0.00 31.23 2.69
3784 4107 5.104193 AGGCTTCATACACTGGAGATTTCAT 60.104 40.000 0.00 0.00 31.23 2.57
3785 4108 6.100279 AGGCTTCATACACTGGAGATTTCATA 59.900 38.462 0.00 0.00 31.23 2.15
3786 4109 6.203723 GGCTTCATACACTGGAGATTTCATAC 59.796 42.308 0.00 0.00 31.23 2.39
3787 4110 6.074088 GCTTCATACACTGGAGATTTCATACG 60.074 42.308 0.00 0.00 31.23 3.06
3788 4111 6.709018 TCATACACTGGAGATTTCATACGA 57.291 37.500 0.00 0.00 0.00 3.43
3789 4112 7.290110 TCATACACTGGAGATTTCATACGAT 57.710 36.000 0.00 0.00 0.00 3.73
3790 4113 7.147976 TCATACACTGGAGATTTCATACGATG 58.852 38.462 0.00 0.00 0.00 3.84
3791 4114 5.598416 ACACTGGAGATTTCATACGATGA 57.402 39.130 0.00 0.00 37.55 2.92
3792 4115 5.977635 ACACTGGAGATTTCATACGATGAA 58.022 37.500 6.28 6.28 46.77 2.57
3800 4123 1.575244 TCATACGATGAAGCTGCTGC 58.425 50.000 1.35 7.62 36.11 5.25
3801 4124 0.231534 CATACGATGAAGCTGCTGCG 59.768 55.000 1.35 7.88 45.42 5.18
3802 4125 0.877649 ATACGATGAAGCTGCTGCGG 60.878 55.000 1.35 3.55 45.42 5.69
3803 4126 2.906182 TACGATGAAGCTGCTGCGGG 62.906 60.000 10.99 0.00 45.42 6.13
3804 4127 2.437359 GATGAAGCTGCTGCGGGT 60.437 61.111 7.47 7.47 45.42 5.28
3805 4128 2.749044 ATGAAGCTGCTGCGGGTG 60.749 61.111 14.66 0.00 45.42 4.61
3817 4140 3.505808 GCGGGTGCATCTATCTCTC 57.494 57.895 0.00 0.00 42.15 3.20
3818 4141 0.387878 GCGGGTGCATCTATCTCTCG 60.388 60.000 0.00 0.00 42.15 4.04
3819 4142 0.242286 CGGGTGCATCTATCTCTCGG 59.758 60.000 0.00 0.00 0.00 4.63
3820 4143 0.037790 GGGTGCATCTATCTCTCGGC 60.038 60.000 0.00 0.00 0.00 5.54
3821 4144 0.037790 GGTGCATCTATCTCTCGGCC 60.038 60.000 0.00 0.00 0.00 6.13
3822 4145 0.037790 GTGCATCTATCTCTCGGCCC 60.038 60.000 0.00 0.00 0.00 5.80
3823 4146 1.188219 TGCATCTATCTCTCGGCCCC 61.188 60.000 0.00 0.00 0.00 5.80
3824 4147 1.188219 GCATCTATCTCTCGGCCCCA 61.188 60.000 0.00 0.00 0.00 4.96
3825 4148 1.342074 CATCTATCTCTCGGCCCCAA 58.658 55.000 0.00 0.00 0.00 4.12
3826 4149 1.274728 CATCTATCTCTCGGCCCCAAG 59.725 57.143 0.00 0.00 0.00 3.61
3827 4150 0.556258 TCTATCTCTCGGCCCCAAGA 59.444 55.000 0.00 0.00 0.00 3.02
3828 4151 1.063190 TCTATCTCTCGGCCCCAAGAA 60.063 52.381 0.00 0.00 0.00 2.52
3829 4152 1.762957 CTATCTCTCGGCCCCAAGAAA 59.237 52.381 0.00 0.00 0.00 2.52
3830 4153 1.216990 ATCTCTCGGCCCCAAGAAAT 58.783 50.000 0.00 0.00 0.00 2.17
3831 4154 0.253044 TCTCTCGGCCCCAAGAAATG 59.747 55.000 0.00 0.00 0.00 2.32
3832 4155 0.035056 CTCTCGGCCCCAAGAAATGT 60.035 55.000 0.00 0.00 0.00 2.71
3833 4156 1.209504 CTCTCGGCCCCAAGAAATGTA 59.790 52.381 0.00 0.00 0.00 2.29
3834 4157 1.065709 TCTCGGCCCCAAGAAATGTAC 60.066 52.381 0.00 0.00 0.00 2.90
3835 4158 0.034863 TCGGCCCCAAGAAATGTACC 60.035 55.000 0.00 0.00 0.00 3.34
3836 4159 0.322997 CGGCCCCAAGAAATGTACCA 60.323 55.000 0.00 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 81 6.870971 ATACAGACCAACGTTGTTTTACAT 57.129 33.333 25.63 10.04 0.00 2.29
501 573 2.517402 TCGTTTTTGCGGCTGGGT 60.517 55.556 0.00 0.00 0.00 4.51
1134 1334 4.141459 CCCAACTCTAGAAATCCCCTAACC 60.141 50.000 0.00 0.00 0.00 2.85
1161 1361 2.232208 AGCTACTTTTGCCAATTCAGCC 59.768 45.455 0.00 0.00 0.00 4.85
1181 1381 7.256756 AGATGAATTGGCGAGATTAAAGAAG 57.743 36.000 0.00 0.00 0.00 2.85
1615 1868 1.005512 CACCGTCGACACCAATGGA 60.006 57.895 17.16 0.00 0.00 3.41
1836 2105 2.412112 CGGCACCTACGCTAGACC 59.588 66.667 0.00 0.00 0.00 3.85
2069 2341 2.143925 GAACTCCAGCACAACAGTACC 58.856 52.381 0.00 0.00 0.00 3.34
2076 2348 1.813862 CGGAAAGGAACTCCAGCACAA 60.814 52.381 0.00 0.00 38.49 3.33
2079 2351 1.374947 CCGGAAAGGAACTCCAGCA 59.625 57.895 0.00 0.00 45.00 4.41
2081 2353 0.912486 ATCCCGGAAAGGAACTCCAG 59.088 55.000 0.73 0.00 45.00 3.86
2084 2356 3.271729 GAAAGATCCCGGAAAGGAACTC 58.728 50.000 0.73 0.00 45.00 3.01
2089 2361 2.489938 TGTGAAAGATCCCGGAAAGG 57.510 50.000 0.73 0.00 40.63 3.11
2090 2362 3.609853 TCATGTGAAAGATCCCGGAAAG 58.390 45.455 0.73 0.00 0.00 2.62
2093 2365 2.093500 CACTCATGTGAAAGATCCCGGA 60.093 50.000 0.73 0.00 46.55 5.14
2096 2368 5.882557 ACATTACACTCATGTGAAAGATCCC 59.117 40.000 0.94 0.00 46.55 3.85
2097 2369 6.992063 ACATTACACTCATGTGAAAGATCC 57.008 37.500 0.94 0.00 46.55 3.36
2111 2383 6.609212 AGGATATCACTCAGACACATTACACT 59.391 38.462 4.83 0.00 0.00 3.55
2112 2384 6.699204 CAGGATATCACTCAGACACATTACAC 59.301 42.308 4.83 0.00 0.00 2.90
2115 2387 7.846101 ATCAGGATATCACTCAGACACATTA 57.154 36.000 4.83 0.00 0.00 1.90
2117 2389 7.148103 CGATATCAGGATATCACTCAGACACAT 60.148 40.741 22.46 0.00 46.20 3.21
2118 2390 6.150140 CGATATCAGGATATCACTCAGACACA 59.850 42.308 22.46 0.00 46.20 3.72
2119 2391 6.550843 CGATATCAGGATATCACTCAGACAC 58.449 44.000 22.46 0.71 46.20 3.67
2120 2392 5.124617 GCGATATCAGGATATCACTCAGACA 59.875 44.000 22.46 0.00 46.20 3.41
2121 2393 5.356751 AGCGATATCAGGATATCACTCAGAC 59.643 44.000 22.46 8.02 46.20 3.51
2128 2400 3.515104 TGCCAAGCGATATCAGGATATCA 59.485 43.478 22.46 5.64 46.20 2.15
2130 2402 4.449131 CATGCCAAGCGATATCAGGATAT 58.551 43.478 3.12 1.51 36.75 1.63
2132 2404 2.617276 CCATGCCAAGCGATATCAGGAT 60.617 50.000 3.12 0.00 0.00 3.24
2134 2406 1.162698 CCATGCCAAGCGATATCAGG 58.837 55.000 3.12 0.15 0.00 3.86
2156 2428 8.562949 AAGAAATTTACTAGGCTATACTGGGA 57.437 34.615 0.00 0.00 0.00 4.37
2158 2430 9.614792 ACAAAGAAATTTACTAGGCTATACTGG 57.385 33.333 0.00 0.00 0.00 4.00
2183 2455 0.179124 TTGTGCCTTTTGTTGCGGAC 60.179 50.000 0.00 0.00 0.00 4.79
2185 2457 0.459237 TGTTGTGCCTTTTGTTGCGG 60.459 50.000 0.00 0.00 0.00 5.69
2192 2464 4.685924 CACATCTTCTTGTTGTGCCTTTT 58.314 39.130 0.00 0.00 38.86 2.27
2202 2474 2.550830 AAGGACGCACATCTTCTTGT 57.449 45.000 0.00 0.00 0.00 3.16
2218 2490 3.503748 CCTTGCAGTTGAAGGAACTAAGG 59.496 47.826 0.00 0.00 43.52 2.69
2254 2526 1.805943 CATGACTTCATGCACCAACGA 59.194 47.619 6.29 0.00 45.92 3.85
2287 2559 6.601332 TCCAAGAACCAACTCTGTAATTCTT 58.399 36.000 0.00 0.00 36.97 2.52
2288 2560 6.187727 TCCAAGAACCAACTCTGTAATTCT 57.812 37.500 0.00 0.00 0.00 2.40
2299 2571 9.139174 CAACATTTTACATATCCAAGAACCAAC 57.861 33.333 0.00 0.00 0.00 3.77
2317 2589 4.285863 TCTGTTCCTCCCAACAACATTTT 58.714 39.130 0.00 0.00 35.83 1.82
2326 2598 5.529289 ACATCTACTATCTGTTCCTCCCAA 58.471 41.667 0.00 0.00 0.00 4.12
2349 2621 1.771854 TGAACCTCCTGTAACTGGCAA 59.228 47.619 0.00 0.00 0.00 4.52
2359 2631 2.168106 CCTCTGATCACTGAACCTCCTG 59.832 54.545 0.00 0.00 0.00 3.86
2364 2636 1.208293 GACCCCTCTGATCACTGAACC 59.792 57.143 0.00 0.00 0.00 3.62
2365 2637 1.902508 TGACCCCTCTGATCACTGAAC 59.097 52.381 0.00 0.00 0.00 3.18
2383 2655 6.899089 TCCTTTATGCTGAATAGTCCATTGA 58.101 36.000 0.00 0.00 0.00 2.57
2400 2672 4.384056 CTGATCTTGGTCGCATCCTTTAT 58.616 43.478 0.00 0.00 0.00 1.40
2403 2675 1.134280 CCTGATCTTGGTCGCATCCTT 60.134 52.381 0.00 0.00 0.00 3.36
2404 2676 0.467384 CCTGATCTTGGTCGCATCCT 59.533 55.000 0.00 0.00 0.00 3.24
2407 2679 2.569059 CATTCCTGATCTTGGTCGCAT 58.431 47.619 0.00 0.00 0.00 4.73
2414 2686 0.554792 AGCCCCCATTCCTGATCTTG 59.445 55.000 0.00 0.00 0.00 3.02
2419 2691 1.284785 CTGTTTAGCCCCCATTCCTGA 59.715 52.381 0.00 0.00 0.00 3.86
2446 2718 3.095332 CCAGAGAAGGACACTCTCATCA 58.905 50.000 0.00 0.00 41.94 3.07
2449 2721 1.261480 GCCAGAGAAGGACACTCTCA 58.739 55.000 0.00 0.00 41.94 3.27
2473 2745 0.183492 AGAAGCACAAGTCCCTTGCA 59.817 50.000 3.96 0.00 44.43 4.08
2478 2750 2.561478 TTGGTAGAAGCACAAGTCCC 57.439 50.000 0.00 0.00 0.00 4.46
2502 2774 1.395954 CATGACAAGCTGATGTGTCGG 59.604 52.381 10.80 3.41 45.83 4.79
2503 2775 2.071540 ACATGACAAGCTGATGTGTCG 58.928 47.619 10.80 1.87 45.83 4.35
2516 2788 0.322098 CCCGTGGCCTTTACATGACA 60.322 55.000 3.32 0.00 0.00 3.58
2520 2792 0.751643 GCATCCCGTGGCCTTTACAT 60.752 55.000 3.32 0.00 0.00 2.29
2523 2795 1.077787 CTGCATCCCGTGGCCTTTA 60.078 57.895 3.32 0.00 0.00 1.85
2525 2797 3.329889 TCTGCATCCCGTGGCCTT 61.330 61.111 3.32 0.00 0.00 4.35
2527 2799 2.819984 TTTCTCTGCATCCCGTGGCC 62.820 60.000 0.00 0.00 0.00 5.36
2533 2805 3.766051 AGTTGGAAATTTCTCTGCATCCC 59.234 43.478 17.42 0.00 0.00 3.85
2534 2806 5.415701 TGTAGTTGGAAATTTCTCTGCATCC 59.584 40.000 17.42 0.00 0.00 3.51
2535 2807 6.500684 TGTAGTTGGAAATTTCTCTGCATC 57.499 37.500 17.42 6.63 0.00 3.91
2567 2839 2.826128 TCTCAGGCTTGACGAACAGTAT 59.174 45.455 0.00 0.00 0.00 2.12
2575 2847 2.522836 ATAGCATCTCAGGCTTGACG 57.477 50.000 0.00 0.00 42.62 4.35
2579 2851 1.493871 AGGCAATAGCATCTCAGGCTT 59.506 47.619 0.00 0.00 44.61 4.35
2581 2853 1.236628 CAGGCAATAGCATCTCAGGC 58.763 55.000 0.00 0.00 44.61 4.85
2599 2871 1.215382 CAGATTCCGTCTCGTGCCA 59.785 57.895 0.00 0.00 34.00 4.92
2605 2877 4.201763 GCATTCTTGAACAGATTCCGTCTC 60.202 45.833 0.00 0.00 34.00 3.36
2611 2883 4.565564 GCATTGGCATTCTTGAACAGATTC 59.434 41.667 0.00 0.00 40.72 2.52
2624 2896 1.822990 CTCCAGTTCAGCATTGGCATT 59.177 47.619 0.00 0.00 44.61 3.56
2625 2897 1.005097 TCTCCAGTTCAGCATTGGCAT 59.995 47.619 0.00 0.00 44.61 4.40
2629 2901 4.741342 GGATTTTCTCCAGTTCAGCATTG 58.259 43.478 0.00 0.00 44.26 2.82
2650 2922 0.036010 ATGGCTTGTCGTCCTTGAGG 60.036 55.000 0.00 0.00 0.00 3.86
2651 2923 1.363744 GATGGCTTGTCGTCCTTGAG 58.636 55.000 0.00 0.00 0.00 3.02
2679 2984 4.035675 GTGGCTTATTTCCCTTGAGAATCG 59.964 45.833 0.00 0.00 38.61 3.34
2685 2990 2.919602 AGGAGTGGCTTATTTCCCTTGA 59.080 45.455 0.00 0.00 0.00 3.02
2690 2995 3.956744 ACTTGAGGAGTGGCTTATTTCC 58.043 45.455 0.00 0.00 37.17 3.13
2695 3000 2.567615 GAGGAACTTGAGGAGTGGCTTA 59.432 50.000 0.00 0.00 41.55 3.09
2696 3001 1.349357 GAGGAACTTGAGGAGTGGCTT 59.651 52.381 0.00 0.00 41.55 4.35
2697 3002 0.980423 GAGGAACTTGAGGAGTGGCT 59.020 55.000 0.00 0.00 41.55 4.75
2698 3003 0.687354 TGAGGAACTTGAGGAGTGGC 59.313 55.000 0.00 0.00 41.55 5.01
2699 3004 2.289945 CCTTGAGGAACTTGAGGAGTGG 60.290 54.545 0.00 0.00 41.55 4.00
2700 3005 2.289945 CCCTTGAGGAACTTGAGGAGTG 60.290 54.545 0.00 0.00 41.55 3.51
2701 3006 1.981495 CCCTTGAGGAACTTGAGGAGT 59.019 52.381 0.00 0.00 41.55 3.85
2702 3007 2.260822 TCCCTTGAGGAACTTGAGGAG 58.739 52.381 0.00 0.00 43.78 3.69
2703 3008 2.415983 TCCCTTGAGGAACTTGAGGA 57.584 50.000 0.00 0.00 43.78 3.71
2712 3017 1.071314 TGGCCCTTTTCCCTTGAGGA 61.071 55.000 0.00 0.00 45.68 3.71
2713 3018 0.041684 ATGGCCCTTTTCCCTTGAGG 59.958 55.000 0.00 0.00 0.00 3.86
2714 3019 1.272648 TGATGGCCCTTTTCCCTTGAG 60.273 52.381 0.00 0.00 0.00 3.02
2715 3020 0.783206 TGATGGCCCTTTTCCCTTGA 59.217 50.000 0.00 0.00 0.00 3.02
2716 3021 0.897621 GTGATGGCCCTTTTCCCTTG 59.102 55.000 0.00 0.00 0.00 3.61
2717 3022 0.252239 GGTGATGGCCCTTTTCCCTT 60.252 55.000 0.00 0.00 0.00 3.95
2718 3023 1.149133 AGGTGATGGCCCTTTTCCCT 61.149 55.000 0.00 0.00 0.00 4.20
2719 3024 0.972471 CAGGTGATGGCCCTTTTCCC 60.972 60.000 0.00 0.00 0.00 3.97
2720 3025 0.039618 TCAGGTGATGGCCCTTTTCC 59.960 55.000 0.00 0.00 0.00 3.13
2721 3026 1.467920 CTCAGGTGATGGCCCTTTTC 58.532 55.000 0.00 0.00 0.00 2.29
2722 3027 0.040204 CCTCAGGTGATGGCCCTTTT 59.960 55.000 0.00 0.00 0.00 2.27
2723 3028 0.846427 TCCTCAGGTGATGGCCCTTT 60.846 55.000 0.00 0.00 0.00 3.11
2724 3029 1.229951 TCCTCAGGTGATGGCCCTT 60.230 57.895 0.00 0.00 0.00 3.95
2725 3030 1.692042 CTCCTCAGGTGATGGCCCT 60.692 63.158 0.00 0.00 0.00 5.19
2733 3038 0.979665 TCTTTCAGCCTCCTCAGGTG 59.020 55.000 0.00 0.00 42.74 4.00
2734 3039 1.627834 CTTCTTTCAGCCTCCTCAGGT 59.372 52.381 0.00 0.00 42.74 4.00
2741 3046 2.810852 CCACAAGTCTTCTTTCAGCCTC 59.189 50.000 0.00 0.00 0.00 4.70
2744 3049 3.206150 TGTCCACAAGTCTTCTTTCAGC 58.794 45.455 0.00 0.00 0.00 4.26
2745 3050 5.818136 TTTGTCCACAAGTCTTCTTTCAG 57.182 39.130 0.00 0.00 37.15 3.02
2766 3071 2.475519 CGCCGCAACTTGACGATTATTT 60.476 45.455 0.00 0.00 0.00 1.40
2767 3072 1.062002 CGCCGCAACTTGACGATTATT 59.938 47.619 0.00 0.00 0.00 1.40
2775 3080 3.648982 CTGTGCGCCGCAACTTGA 61.649 61.111 15.84 0.00 41.47 3.02
2780 3085 4.403137 GCATTCTGTGCGCCGCAA 62.403 61.111 15.84 0.00 45.23 4.85
2788 3093 3.823281 AGATCCTCTCTGCATTCTGTG 57.177 47.619 0.00 0.00 31.12 3.66
2792 3097 4.621274 GCATCCTAGATCCTCTCTGCATTC 60.621 50.000 0.00 0.00 35.28 2.67
2796 3101 2.029110 GTGCATCCTAGATCCTCTCTGC 60.029 54.545 0.00 0.00 35.28 4.26
2800 3105 1.145945 TCCGTGCATCCTAGATCCTCT 59.854 52.381 0.00 0.00 0.00 3.69
2801 3106 1.621992 TCCGTGCATCCTAGATCCTC 58.378 55.000 0.00 0.00 0.00 3.71
2803 3108 1.270358 GGTTCCGTGCATCCTAGATCC 60.270 57.143 0.00 0.00 0.00 3.36
2804 3109 1.603172 CGGTTCCGTGCATCCTAGATC 60.603 57.143 2.82 0.00 0.00 2.75
2806 3111 1.813859 CGGTTCCGTGCATCCTAGA 59.186 57.895 2.82 0.00 0.00 2.43
2807 3112 1.883084 GCGGTTCCGTGCATCCTAG 60.883 63.158 12.81 0.00 0.00 3.02
2809 3114 4.778143 GGCGGTTCCGTGCATCCT 62.778 66.667 12.81 0.00 0.00 3.24
2811 3116 3.799755 GTGGCGGTTCCGTGCATC 61.800 66.667 12.81 0.00 37.80 3.91
2818 3123 3.131478 CAATCCGGTGGCGGTTCC 61.131 66.667 0.00 0.00 0.00 3.62
2819 3124 2.046700 TCAATCCGGTGGCGGTTC 60.047 61.111 0.00 0.00 0.00 3.62
2821 3126 3.000819 TCTCAATCCGGTGGCGGT 61.001 61.111 0.00 0.00 0.00 5.68
2822 3127 2.202932 CTCTCAATCCGGTGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
2823 3128 1.227089 CTCTCTCAATCCGGTGGCG 60.227 63.158 0.00 0.00 0.00 5.69
2825 3130 1.144936 GCCTCTCTCAATCCGGTGG 59.855 63.158 0.00 0.00 0.00 4.61
2828 3133 0.034616 GGATGCCTCTCTCAATCCGG 59.965 60.000 0.00 0.00 0.00 5.14
2829 3134 0.319383 CGGATGCCTCTCTCAATCCG 60.319 60.000 8.38 8.38 43.74 4.18
2830 3135 1.043816 TCGGATGCCTCTCTCAATCC 58.956 55.000 0.00 0.00 0.00 3.01
2831 3136 1.686052 AGTCGGATGCCTCTCTCAATC 59.314 52.381 0.00 0.00 0.00 2.67
2832 3137 1.411977 CAGTCGGATGCCTCTCTCAAT 59.588 52.381 0.00 0.00 0.00 2.57
2833 3138 0.820226 CAGTCGGATGCCTCTCTCAA 59.180 55.000 0.00 0.00 0.00 3.02
2834 3139 1.670949 GCAGTCGGATGCCTCTCTCA 61.671 60.000 1.78 0.00 40.43 3.27
2835 3140 1.067250 GCAGTCGGATGCCTCTCTC 59.933 63.158 1.78 0.00 40.43 3.20
2836 3141 3.215245 GCAGTCGGATGCCTCTCT 58.785 61.111 1.78 0.00 40.43 3.10
2847 3152 1.446272 GAACCTTCCCGAGCAGTCG 60.446 63.158 0.00 0.00 46.39 4.18
2848 3153 1.079057 GGAACCTTCCCGAGCAGTC 60.079 63.158 0.00 0.00 41.62 3.51
2849 3154 3.069778 GGAACCTTCCCGAGCAGT 58.930 61.111 0.00 0.00 41.62 4.40
2858 3163 3.503748 CAGGTCTTGTGAATGGAACCTTC 59.496 47.826 0.00 0.00 0.00 3.46
2859 3164 3.490348 CAGGTCTTGTGAATGGAACCTT 58.510 45.455 0.00 0.00 0.00 3.50
2860 3165 2.224867 CCAGGTCTTGTGAATGGAACCT 60.225 50.000 0.00 0.00 34.81 3.50
2861 3166 2.162681 CCAGGTCTTGTGAATGGAACC 58.837 52.381 0.00 0.00 34.81 3.62
2862 3167 1.541588 GCCAGGTCTTGTGAATGGAAC 59.458 52.381 0.00 0.00 34.81 3.62
2863 3168 1.144708 TGCCAGGTCTTGTGAATGGAA 59.855 47.619 0.00 0.00 34.81 3.53
2864 3169 0.770499 TGCCAGGTCTTGTGAATGGA 59.230 50.000 0.00 0.00 34.81 3.41
2865 3170 1.171308 CTGCCAGGTCTTGTGAATGG 58.829 55.000 0.00 0.00 35.53 3.16
2866 3171 0.524862 GCTGCCAGGTCTTGTGAATG 59.475 55.000 0.00 0.00 0.00 2.67
2867 3172 0.403271 AGCTGCCAGGTCTTGTGAAT 59.597 50.000 0.00 0.00 0.00 2.57
2868 3173 0.183492 AAGCTGCCAGGTCTTGTGAA 59.817 50.000 0.00 0.00 0.00 3.18
2869 3174 0.183492 AAAGCTGCCAGGTCTTGTGA 59.817 50.000 0.00 0.00 0.00 3.58
2870 3175 1.035139 AAAAGCTGCCAGGTCTTGTG 58.965 50.000 0.00 0.00 0.00 3.33
2871 3176 1.780503 AAAAAGCTGCCAGGTCTTGT 58.219 45.000 0.00 0.00 0.00 3.16
2872 3177 3.319122 ACTTAAAAAGCTGCCAGGTCTTG 59.681 43.478 0.00 0.00 0.00 3.02
2873 3178 3.566351 ACTTAAAAAGCTGCCAGGTCTT 58.434 40.909 0.00 0.00 0.00 3.01
2874 3179 3.149981 GACTTAAAAAGCTGCCAGGTCT 58.850 45.455 0.00 0.00 0.00 3.85
2875 3180 2.884639 TGACTTAAAAAGCTGCCAGGTC 59.115 45.455 0.00 0.00 0.00 3.85
2876 3181 2.944129 TGACTTAAAAAGCTGCCAGGT 58.056 42.857 0.00 0.00 0.00 4.00
2877 3182 4.240096 CATTGACTTAAAAAGCTGCCAGG 58.760 43.478 0.00 0.00 0.00 4.45
2878 3183 3.676646 GCATTGACTTAAAAAGCTGCCAG 59.323 43.478 0.00 0.00 0.00 4.85
2879 3184 3.321682 AGCATTGACTTAAAAAGCTGCCA 59.678 39.130 0.00 0.00 0.00 4.92
2880 3185 3.917988 AGCATTGACTTAAAAAGCTGCC 58.082 40.909 0.00 0.00 0.00 4.85
2881 3186 4.984161 TGAAGCATTGACTTAAAAAGCTGC 59.016 37.500 0.00 0.00 0.00 5.25
2882 3187 5.978919 TGTGAAGCATTGACTTAAAAAGCTG 59.021 36.000 0.00 0.00 31.74 4.24
2883 3188 6.147864 TGTGAAGCATTGACTTAAAAAGCT 57.852 33.333 0.00 0.00 31.74 3.74
2884 3189 8.693542 ATATGTGAAGCATTGACTTAAAAAGC 57.306 30.769 0.00 0.00 38.94 3.51
2891 3196 9.630098 CAAAAAGTATATGTGAAGCATTGACTT 57.370 29.630 0.00 0.00 40.22 3.01
2892 3197 7.756722 GCAAAAAGTATATGTGAAGCATTGACT 59.243 33.333 0.00 0.00 38.94 3.41
2893 3198 7.009540 GGCAAAAAGTATATGTGAAGCATTGAC 59.990 37.037 0.00 0.00 38.94 3.18
2894 3199 7.035004 GGCAAAAAGTATATGTGAAGCATTGA 58.965 34.615 0.00 0.00 38.94 2.57
2895 3200 7.009815 CAGGCAAAAAGTATATGTGAAGCATTG 59.990 37.037 0.00 0.00 38.94 2.82
2896 3201 7.037438 CAGGCAAAAAGTATATGTGAAGCATT 58.963 34.615 0.00 0.00 38.94 3.56
2897 3202 6.377996 TCAGGCAAAAAGTATATGTGAAGCAT 59.622 34.615 0.00 0.00 41.42 3.79
2898 3203 5.709631 TCAGGCAAAAAGTATATGTGAAGCA 59.290 36.000 0.00 0.00 0.00 3.91
2899 3204 6.194796 TCAGGCAAAAAGTATATGTGAAGC 57.805 37.500 0.00 0.00 0.00 3.86
2900 3205 6.694411 GCATCAGGCAAAAAGTATATGTGAAG 59.306 38.462 0.00 0.00 43.97 3.02
2901 3206 6.563422 GCATCAGGCAAAAAGTATATGTGAA 58.437 36.000 0.00 0.00 43.97 3.18
2902 3207 6.135290 GCATCAGGCAAAAAGTATATGTGA 57.865 37.500 0.00 0.00 43.97 3.58
2917 3222 4.795308 GCTGGATATTTCTTTGCATCAGGC 60.795 45.833 0.00 0.00 45.13 4.85
2918 3223 4.583489 AGCTGGATATTTCTTTGCATCAGG 59.417 41.667 0.00 0.00 0.00 3.86
2919 3224 5.520632 CAGCTGGATATTTCTTTGCATCAG 58.479 41.667 5.57 0.00 0.00 2.90
2920 3225 4.202080 GCAGCTGGATATTTCTTTGCATCA 60.202 41.667 17.12 0.00 0.00 3.07
2921 3226 4.202080 TGCAGCTGGATATTTCTTTGCATC 60.202 41.667 17.12 0.00 35.61 3.91
2922 3227 3.702548 TGCAGCTGGATATTTCTTTGCAT 59.297 39.130 17.12 0.00 35.61 3.96
2923 3228 3.090790 TGCAGCTGGATATTTCTTTGCA 58.909 40.909 17.12 0.00 37.91 4.08
2924 3229 3.119388 TGTGCAGCTGGATATTTCTTTGC 60.119 43.478 17.12 0.00 0.00 3.68
2925 3230 4.439700 CCTGTGCAGCTGGATATTTCTTTG 60.440 45.833 17.12 0.00 38.33 2.77
2926 3231 3.698040 CCTGTGCAGCTGGATATTTCTTT 59.302 43.478 17.12 0.00 38.33 2.52
2927 3232 3.054139 TCCTGTGCAGCTGGATATTTCTT 60.054 43.478 17.12 0.00 39.82 2.52
2928 3233 2.507058 TCCTGTGCAGCTGGATATTTCT 59.493 45.455 17.12 0.00 39.82 2.52
2929 3234 2.923121 TCCTGTGCAGCTGGATATTTC 58.077 47.619 17.12 0.22 39.82 2.17
2930 3235 3.019564 GTTCCTGTGCAGCTGGATATTT 58.980 45.455 17.12 0.00 43.40 1.40
2931 3236 2.648059 GTTCCTGTGCAGCTGGATATT 58.352 47.619 17.12 0.00 43.40 1.28
2932 3237 1.473965 CGTTCCTGTGCAGCTGGATAT 60.474 52.381 17.12 0.00 43.40 1.63
2933 3238 0.108186 CGTTCCTGTGCAGCTGGATA 60.108 55.000 17.12 10.58 43.40 2.59
2934 3239 1.376424 CGTTCCTGTGCAGCTGGAT 60.376 57.895 17.12 0.00 43.40 3.41
2935 3240 2.031012 CGTTCCTGTGCAGCTGGA 59.969 61.111 17.12 10.66 42.46 3.86
2951 3256 3.213506 TCCAGGCATCATGGATAAAACG 58.786 45.455 0.00 0.00 41.96 3.60
2965 3270 4.410099 ACATTTCAGAAATCTTCCAGGCA 58.590 39.130 5.32 0.00 0.00 4.75
2969 3274 6.979817 CACAACAACATTTCAGAAATCTTCCA 59.020 34.615 5.32 0.00 0.00 3.53
2984 3289 3.703556 TCATCACCCAAACACAACAACAT 59.296 39.130 0.00 0.00 0.00 2.71
2986 3291 3.380004 TCTCATCACCCAAACACAACAAC 59.620 43.478 0.00 0.00 0.00 3.32
2994 3299 3.441572 CCACATCTTCTCATCACCCAAAC 59.558 47.826 0.00 0.00 0.00 2.93
3001 3306 2.502947 CACCTCCCACATCTTCTCATCA 59.497 50.000 0.00 0.00 0.00 3.07
3017 3322 1.673033 CCACACACCTTCGATCACCTC 60.673 57.143 0.00 0.00 0.00 3.85
3026 3331 0.693049 ATCTCCACCCACACACCTTC 59.307 55.000 0.00 0.00 0.00 3.46
3046 3351 0.612174 TACTGGCCGAGAAGCAGAGT 60.612 55.000 8.91 0.89 33.16 3.24
3058 3363 4.162690 CCTCGGCACCTACTGGCC 62.163 72.222 0.00 0.00 46.80 5.36
3076 3381 2.735134 CAAACTCTTGGCGTGTAGGTAC 59.265 50.000 0.00 0.00 0.00 3.34
3078 3383 1.542547 CCAAACTCTTGGCGTGTAGGT 60.543 52.381 0.00 0.00 45.67 3.08
3106 3411 2.578163 TATGTGTGAGCAGCTCCCGC 62.578 60.000 20.16 15.52 0.00 6.13
3107 3412 0.105593 ATATGTGTGAGCAGCTCCCG 59.894 55.000 20.16 0.00 0.00 5.14
3122 3427 1.604947 CGACAGCAGGAGCCAGATATG 60.605 57.143 0.00 0.00 43.56 1.78
3125 3430 2.898738 CGACAGCAGGAGCCAGAT 59.101 61.111 0.00 0.00 43.56 2.90
3161 3466 0.108138 CTCTGTACCCTTTCCGGCAG 60.108 60.000 0.00 0.00 0.00 4.85
3169 3474 0.042881 GGTCCCTCCTCTGTACCCTT 59.957 60.000 0.00 0.00 0.00 3.95
3187 3492 4.998033 GTGTTTCTTCCTCCACTAGAAAGG 59.002 45.833 0.00 0.00 38.25 3.11
3193 3498 1.621814 CCGGTGTTTCTTCCTCCACTA 59.378 52.381 0.00 0.00 0.00 2.74
3198 3503 2.677979 GCGCCGGTGTTTCTTCCTC 61.678 63.158 17.91 0.00 0.00 3.71
3203 3508 4.250305 AGTGGCGCCGGTGTTTCT 62.250 61.111 23.90 9.30 0.00 2.52
3217 3522 3.649277 CTGGGAAGACGGCGGAGTG 62.649 68.421 13.24 0.00 0.00 3.51
3218 3523 3.382832 CTGGGAAGACGGCGGAGT 61.383 66.667 13.24 0.00 0.00 3.85
3224 3529 0.460987 GTGCTGATCTGGGAAGACGG 60.461 60.000 1.46 0.00 0.00 4.79
3225 3530 0.460987 GGTGCTGATCTGGGAAGACG 60.461 60.000 1.46 0.00 0.00 4.18
3226 3531 0.908198 AGGTGCTGATCTGGGAAGAC 59.092 55.000 1.46 0.00 0.00 3.01
3227 3532 1.198713 GAGGTGCTGATCTGGGAAGA 58.801 55.000 1.46 0.00 0.00 2.87
3232 3537 0.107800 CAGTGGAGGTGCTGATCTGG 60.108 60.000 1.46 0.00 34.87 3.86
3234 3539 0.612229 CACAGTGGAGGTGCTGATCT 59.388 55.000 0.00 0.00 36.62 2.75
3236 3541 0.837691 TCCACAGTGGAGGTGCTGAT 60.838 55.000 19.21 0.00 42.67 2.90
3245 3550 0.473694 ACCATGTCCTCCACAGTGGA 60.474 55.000 21.68 21.68 45.98 4.02
3252 3557 0.036164 CGGTCAAACCATGTCCTCCA 59.964 55.000 0.00 0.00 38.47 3.86
3269 3574 1.737793 GGTCTTCATAAGCACCAACGG 59.262 52.381 0.00 0.00 32.44 4.44
3271 3576 5.183904 AGAAATGGTCTTCATAAGCACCAAC 59.816 40.000 12.04 8.64 39.98 3.77
3275 3580 4.336713 GGGAGAAATGGTCTTCATAAGCAC 59.663 45.833 0.00 0.00 36.41 4.40
3294 3599 1.945354 TAAGGTTGAGAGCGCGGGAG 61.945 60.000 8.83 0.00 0.00 4.30
3295 3600 1.945354 CTAAGGTTGAGAGCGCGGGA 61.945 60.000 8.83 0.00 0.00 5.14
3299 3604 2.263945 GAGAACTAAGGTTGAGAGCGC 58.736 52.381 0.00 0.00 35.58 5.92
3300 3605 2.520979 CGAGAACTAAGGTTGAGAGCG 58.479 52.381 0.00 0.00 35.58 5.03
3301 3606 2.094442 AGCGAGAACTAAGGTTGAGAGC 60.094 50.000 0.00 0.00 35.58 4.09
3302 3607 3.859411 AGCGAGAACTAAGGTTGAGAG 57.141 47.619 0.00 0.00 35.58 3.20
3304 3609 6.673316 GCAAATAAGCGAGAACTAAGGTTGAG 60.673 42.308 0.00 0.00 35.58 3.02
3305 3610 5.121768 GCAAATAAGCGAGAACTAAGGTTGA 59.878 40.000 0.00 0.00 35.58 3.18
3306 3611 5.122396 AGCAAATAAGCGAGAACTAAGGTTG 59.878 40.000 0.00 0.00 40.15 3.77
3308 3613 4.833390 AGCAAATAAGCGAGAACTAAGGT 58.167 39.130 0.00 0.00 40.15 3.50
3309 3614 5.803020 AAGCAAATAAGCGAGAACTAAGG 57.197 39.130 0.00 0.00 40.15 2.69
3313 3618 5.428253 TGGATAAGCAAATAAGCGAGAACT 58.572 37.500 0.00 0.00 40.15 3.01
3315 3620 6.989759 TGTATGGATAAGCAAATAAGCGAGAA 59.010 34.615 0.00 0.00 40.15 2.87
3317 3622 6.128445 CCTGTATGGATAAGCAAATAAGCGAG 60.128 42.308 0.00 0.00 37.57 5.03
3333 3638 7.001674 ACAAACAATACAAAGTCCTGTATGGA 58.998 34.615 5.36 0.00 40.79 3.41
3338 3643 7.719633 AGATACACAAACAATACAAAGTCCTGT 59.280 33.333 0.00 0.00 0.00 4.00
3339 3644 8.099364 AGATACACAAACAATACAAAGTCCTG 57.901 34.615 0.00 0.00 0.00 3.86
3340 3645 8.567948 CAAGATACACAAACAATACAAAGTCCT 58.432 33.333 0.00 0.00 0.00 3.85
3348 3653 9.117145 CAACACATCAAGATACACAAACAATAC 57.883 33.333 0.00 0.00 0.00 1.89
3350 3655 7.715657 ACAACACATCAAGATACACAAACAAT 58.284 30.769 0.00 0.00 0.00 2.71
3351 3656 7.094508 ACAACACATCAAGATACACAAACAA 57.905 32.000 0.00 0.00 0.00 2.83
3353 3658 7.985634 AAACAACACATCAAGATACACAAAC 57.014 32.000 0.00 0.00 0.00 2.93
3355 3660 8.227119 CGATAAACAACACATCAAGATACACAA 58.773 33.333 0.00 0.00 0.00 3.33
3357 3662 7.180079 CCGATAAACAACACATCAAGATACAC 58.820 38.462 0.00 0.00 0.00 2.90
3358 3663 6.183360 GCCGATAAACAACACATCAAGATACA 60.183 38.462 0.00 0.00 0.00 2.29
3359 3664 6.192360 GCCGATAAACAACACATCAAGATAC 58.808 40.000 0.00 0.00 0.00 2.24
3360 3665 5.006261 CGCCGATAAACAACACATCAAGATA 59.994 40.000 0.00 0.00 0.00 1.98
3361 3666 4.201812 CGCCGATAAACAACACATCAAGAT 60.202 41.667 0.00 0.00 0.00 2.40
3362 3667 3.124466 CGCCGATAAACAACACATCAAGA 59.876 43.478 0.00 0.00 0.00 3.02
3363 3668 3.120338 ACGCCGATAAACAACACATCAAG 60.120 43.478 0.00 0.00 0.00 3.02
3364 3669 2.809119 ACGCCGATAAACAACACATCAA 59.191 40.909 0.00 0.00 0.00 2.57
3365 3670 2.158645 CACGCCGATAAACAACACATCA 59.841 45.455 0.00 0.00 0.00 3.07
3367 3672 1.135803 GCACGCCGATAAACAACACAT 60.136 47.619 0.00 0.00 0.00 3.21
3368 3673 0.236187 GCACGCCGATAAACAACACA 59.764 50.000 0.00 0.00 0.00 3.72
3369 3674 0.515564 AGCACGCCGATAAACAACAC 59.484 50.000 0.00 0.00 0.00 3.32
3370 3675 1.195900 GAAGCACGCCGATAAACAACA 59.804 47.619 0.00 0.00 0.00 3.33
3372 3677 1.730064 GAGAAGCACGCCGATAAACAA 59.270 47.619 0.00 0.00 0.00 2.83
3373 3678 1.067142 AGAGAAGCACGCCGATAAACA 60.067 47.619 0.00 0.00 0.00 2.83
3374 3679 1.641577 AGAGAAGCACGCCGATAAAC 58.358 50.000 0.00 0.00 0.00 2.01
3376 3681 1.066605 GGTAGAGAAGCACGCCGATAA 59.933 52.381 0.00 0.00 0.00 1.75
3380 3685 0.460284 AATGGTAGAGAAGCACGCCG 60.460 55.000 0.00 0.00 38.70 6.46
3381 3686 1.009829 CAATGGTAGAGAAGCACGCC 58.990 55.000 0.00 0.00 38.70 5.68
3383 3688 3.067106 ACAACAATGGTAGAGAAGCACG 58.933 45.455 0.00 0.00 38.70 5.34
3384 3689 4.757149 AGAACAACAATGGTAGAGAAGCAC 59.243 41.667 0.00 0.00 38.70 4.40
3422 3743 7.793927 AAGAAACATACAGGCTTAGAATAGC 57.206 36.000 0.00 0.00 40.48 2.97
3426 3747 9.309516 CGTAATAAGAAACATACAGGCTTAGAA 57.690 33.333 0.00 0.00 0.00 2.10
3428 3749 7.709613 ACCGTAATAAGAAACATACAGGCTTAG 59.290 37.037 0.00 0.00 0.00 2.18
3429 3750 7.493320 CACCGTAATAAGAAACATACAGGCTTA 59.507 37.037 0.00 0.00 0.00 3.09
3430 3751 6.315393 CACCGTAATAAGAAACATACAGGCTT 59.685 38.462 0.00 0.00 0.00 4.35
3431 3752 5.815740 CACCGTAATAAGAAACATACAGGCT 59.184 40.000 0.00 0.00 0.00 4.58
3432 3753 5.007332 CCACCGTAATAAGAAACATACAGGC 59.993 44.000 0.00 0.00 0.00 4.85
3433 3754 5.007332 GCCACCGTAATAAGAAACATACAGG 59.993 44.000 0.00 0.00 0.00 4.00
3434 3755 5.815740 AGCCACCGTAATAAGAAACATACAG 59.184 40.000 0.00 0.00 0.00 2.74
3473 3794 3.432252 CACGATCCCAGTCTTACAAACAC 59.568 47.826 0.00 0.00 0.00 3.32
3485 3806 2.674852 CAAATGACTGTCACGATCCCAG 59.325 50.000 13.50 0.00 0.00 4.45
3490 3811 4.005650 AGCATTCAAATGACTGTCACGAT 58.994 39.130 13.50 0.00 38.70 3.73
3521 3842 7.910162 GGTTGCAGTGATACATTACATTAACAG 59.090 37.037 0.00 0.00 0.00 3.16
3523 3844 7.148154 TGGGTTGCAGTGATACATTACATTAAC 60.148 37.037 0.00 0.00 0.00 2.01
3524 3845 6.887002 TGGGTTGCAGTGATACATTACATTAA 59.113 34.615 0.00 0.00 0.00 1.40
3538 3859 2.513753 TCTGGTATTTGGGTTGCAGTG 58.486 47.619 0.00 0.00 0.00 3.66
3542 3863 4.535526 ACAATTCTGGTATTTGGGTTGC 57.464 40.909 0.00 0.00 0.00 4.17
3544 3865 5.185056 GCACTACAATTCTGGTATTTGGGTT 59.815 40.000 0.00 0.00 0.00 4.11
3554 3875 4.520492 AGGAAAACAGCACTACAATTCTGG 59.480 41.667 0.00 0.00 0.00 3.86
3563 3884 5.070001 ACATTAGCAAGGAAAACAGCACTA 58.930 37.500 0.00 0.00 0.00 2.74
3580 3901 3.717707 ACGGGACAATCATCGACATTAG 58.282 45.455 0.00 0.00 0.00 1.73
3582 3903 2.550978 GACGGGACAATCATCGACATT 58.449 47.619 0.00 0.00 0.00 2.71
3584 3905 0.179148 CGACGGGACAATCATCGACA 60.179 55.000 0.00 0.00 34.77 4.35
3585 3906 0.099968 TCGACGGGACAATCATCGAC 59.900 55.000 0.00 0.00 36.92 4.20
3586 3907 1.029681 ATCGACGGGACAATCATCGA 58.970 50.000 0.00 0.00 45.01 3.59
3587 3908 1.852942 AATCGACGGGACAATCATCG 58.147 50.000 0.00 0.00 0.00 3.84
3588 3909 3.736252 CAGTAATCGACGGGACAATCATC 59.264 47.826 0.00 0.00 0.00 2.92
3589 3910 3.717707 CAGTAATCGACGGGACAATCAT 58.282 45.455 0.00 0.00 0.00 2.45
3590 3911 2.737359 GCAGTAATCGACGGGACAATCA 60.737 50.000 0.00 0.00 0.00 2.57
3591 3912 1.859080 GCAGTAATCGACGGGACAATC 59.141 52.381 0.00 0.00 0.00 2.67
3597 3919 0.391927 TTTGGGCAGTAATCGACGGG 60.392 55.000 0.00 0.00 0.00 5.28
3598 3920 1.129811 GTTTTGGGCAGTAATCGACGG 59.870 52.381 0.00 0.00 0.00 4.79
3602 3924 3.252215 TCACTTGTTTTGGGCAGTAATCG 59.748 43.478 0.00 0.00 0.00 3.34
3610 3932 3.177997 ACAACATCACTTGTTTTGGGC 57.822 42.857 0.00 0.00 46.51 5.36
3640 3962 6.094048 ACACTGCAGCAGAAATCGTATAAATT 59.906 34.615 29.70 0.00 35.18 1.82
3648 3970 2.738846 AGTAACACTGCAGCAGAAATCG 59.261 45.455 29.70 13.10 35.18 3.34
3677 4000 4.681942 GGCATCATCGAACACTCTGTATAC 59.318 45.833 0.00 0.00 0.00 1.47
3681 4004 1.276138 TGGCATCATCGAACACTCTGT 59.724 47.619 0.00 0.00 0.00 3.41
3690 4013 2.026729 TGGTTAACCTTGGCATCATCGA 60.027 45.455 24.78 0.00 36.82 3.59
3705 4028 9.948964 CCATCTATCTGATATTCACATGGTTAA 57.051 33.333 0.00 0.00 33.36 2.01
3706 4029 9.325248 TCCATCTATCTGATATTCACATGGTTA 57.675 33.333 0.00 0.00 33.36 2.85
3707 4030 8.211030 TCCATCTATCTGATATTCACATGGTT 57.789 34.615 0.00 0.00 33.36 3.67
3708 4031 7.803487 TCCATCTATCTGATATTCACATGGT 57.197 36.000 0.00 0.00 33.36 3.55
3709 4032 9.110502 CATTCCATCTATCTGATATTCACATGG 57.889 37.037 0.00 5.84 33.36 3.66
3710 4033 9.110502 CCATTCCATCTATCTGATATTCACATG 57.889 37.037 0.00 0.00 33.36 3.21
3711 4034 8.272889 CCCATTCCATCTATCTGATATTCACAT 58.727 37.037 0.00 0.00 33.36 3.21
3712 4035 7.458806 TCCCATTCCATCTATCTGATATTCACA 59.541 37.037 0.00 0.00 33.36 3.58
3713 4036 7.855375 TCCCATTCCATCTATCTGATATTCAC 58.145 38.462 0.00 0.00 33.36 3.18
3714 4037 8.491958 CATCCCATTCCATCTATCTGATATTCA 58.508 37.037 0.00 0.00 33.36 2.57
3715 4038 7.937942 CCATCCCATTCCATCTATCTGATATTC 59.062 40.741 0.00 0.00 33.36 1.75
3716 4039 7.630534 TCCATCCCATTCCATCTATCTGATATT 59.369 37.037 0.00 0.00 33.36 1.28
3717 4040 7.144430 TCCATCCCATTCCATCTATCTGATAT 58.856 38.462 0.00 0.00 33.36 1.63
3718 4041 6.514863 TCCATCCCATTCCATCTATCTGATA 58.485 40.000 0.00 0.00 33.36 2.15
3719 4042 5.356575 TCCATCCCATTCCATCTATCTGAT 58.643 41.667 0.00 0.00 35.40 2.90
3720 4043 4.766768 TCCATCCCATTCCATCTATCTGA 58.233 43.478 0.00 0.00 0.00 3.27
3721 4044 5.250082 TCTTCCATCCCATTCCATCTATCTG 59.750 44.000 0.00 0.00 0.00 2.90
3722 4045 5.418654 TCTTCCATCCCATTCCATCTATCT 58.581 41.667 0.00 0.00 0.00 1.98
3723 4046 5.743117 CTCTTCCATCCCATTCCATCTATC 58.257 45.833 0.00 0.00 0.00 2.08
3724 4047 4.018597 GCTCTTCCATCCCATTCCATCTAT 60.019 45.833 0.00 0.00 0.00 1.98
3725 4048 3.328931 GCTCTTCCATCCCATTCCATCTA 59.671 47.826 0.00 0.00 0.00 1.98
3726 4049 2.107901 GCTCTTCCATCCCATTCCATCT 59.892 50.000 0.00 0.00 0.00 2.90
3727 4050 2.107901 AGCTCTTCCATCCCATTCCATC 59.892 50.000 0.00 0.00 0.00 3.51
3728 4051 2.141911 AGCTCTTCCATCCCATTCCAT 58.858 47.619 0.00 0.00 0.00 3.41
3729 4052 1.600058 AGCTCTTCCATCCCATTCCA 58.400 50.000 0.00 0.00 0.00 3.53
3730 4053 2.305009 CAAGCTCTTCCATCCCATTCC 58.695 52.381 0.00 0.00 0.00 3.01
3731 4054 2.305009 CCAAGCTCTTCCATCCCATTC 58.695 52.381 0.00 0.00 0.00 2.67
3732 4055 1.687368 GCCAAGCTCTTCCATCCCATT 60.687 52.381 0.00 0.00 0.00 3.16
3733 4056 0.106318 GCCAAGCTCTTCCATCCCAT 60.106 55.000 0.00 0.00 0.00 4.00
3734 4057 1.304282 GCCAAGCTCTTCCATCCCA 59.696 57.895 0.00 0.00 0.00 4.37
3735 4058 1.454663 GGCCAAGCTCTTCCATCCC 60.455 63.158 0.00 0.00 0.00 3.85
3736 4059 1.821332 CGGCCAAGCTCTTCCATCC 60.821 63.158 2.24 0.00 0.00 3.51
3737 4060 1.092345 GTCGGCCAAGCTCTTCCATC 61.092 60.000 2.24 0.00 0.00 3.51
3738 4061 1.078143 GTCGGCCAAGCTCTTCCAT 60.078 57.895 2.24 0.00 0.00 3.41
3739 4062 2.050836 TTGTCGGCCAAGCTCTTCCA 62.051 55.000 2.24 0.00 0.00 3.53
3740 4063 1.302511 TTGTCGGCCAAGCTCTTCC 60.303 57.895 2.24 0.00 0.00 3.46
3741 4064 0.884704 TGTTGTCGGCCAAGCTCTTC 60.885 55.000 2.24 0.00 32.51 2.87
3742 4065 0.886490 CTGTTGTCGGCCAAGCTCTT 60.886 55.000 2.24 0.00 32.51 2.85
3743 4066 1.302033 CTGTTGTCGGCCAAGCTCT 60.302 57.895 2.24 0.00 32.51 4.09
3744 4067 2.328099 CCTGTTGTCGGCCAAGCTC 61.328 63.158 2.24 0.00 32.51 4.09
3745 4068 2.281761 CCTGTTGTCGGCCAAGCT 60.282 61.111 2.24 0.00 32.51 3.74
3746 4069 4.043200 GCCTGTTGTCGGCCAAGC 62.043 66.667 2.24 0.00 41.73 4.01
3752 4075 1.732259 GTGTATGAAGCCTGTTGTCGG 59.268 52.381 0.00 0.00 0.00 4.79
3753 4076 2.413112 CAGTGTATGAAGCCTGTTGTCG 59.587 50.000 0.00 0.00 0.00 4.35
3754 4077 2.744202 CCAGTGTATGAAGCCTGTTGTC 59.256 50.000 0.00 0.00 0.00 3.18
3755 4078 2.371841 TCCAGTGTATGAAGCCTGTTGT 59.628 45.455 0.00 0.00 0.00 3.32
3756 4079 3.005554 CTCCAGTGTATGAAGCCTGTTG 58.994 50.000 0.00 0.00 0.00 3.33
3757 4080 2.906389 TCTCCAGTGTATGAAGCCTGTT 59.094 45.455 0.00 0.00 0.00 3.16
3758 4081 2.540383 TCTCCAGTGTATGAAGCCTGT 58.460 47.619 0.00 0.00 0.00 4.00
3759 4082 3.834489 ATCTCCAGTGTATGAAGCCTG 57.166 47.619 0.00 0.00 0.00 4.85
3760 4083 4.225942 TGAAATCTCCAGTGTATGAAGCCT 59.774 41.667 0.00 0.00 0.00 4.58
3761 4084 4.517285 TGAAATCTCCAGTGTATGAAGCC 58.483 43.478 0.00 0.00 0.00 4.35
3762 4085 6.074088 CGTATGAAATCTCCAGTGTATGAAGC 60.074 42.308 0.00 0.00 0.00 3.86
3763 4086 7.203218 TCGTATGAAATCTCCAGTGTATGAAG 58.797 38.462 0.00 0.00 0.00 3.02
3764 4087 7.107639 TCGTATGAAATCTCCAGTGTATGAA 57.892 36.000 0.00 0.00 0.00 2.57
3765 4088 6.709018 TCGTATGAAATCTCCAGTGTATGA 57.291 37.500 0.00 0.00 0.00 2.15
3766 4089 7.147976 TCATCGTATGAAATCTCCAGTGTATG 58.852 38.462 0.00 0.00 36.11 2.39
3767 4090 7.290110 TCATCGTATGAAATCTCCAGTGTAT 57.710 36.000 0.00 0.00 36.11 2.29
3768 4091 6.709018 TCATCGTATGAAATCTCCAGTGTA 57.291 37.500 0.00 0.00 36.11 2.90
3769 4092 5.598416 TCATCGTATGAAATCTCCAGTGT 57.402 39.130 0.00 0.00 36.11 3.55
3780 4103 1.935873 GCAGCAGCTTCATCGTATGAA 59.064 47.619 0.00 9.09 46.30 2.57
3781 4104 1.575244 GCAGCAGCTTCATCGTATGA 58.425 50.000 0.00 0.00 37.91 2.15
3782 4105 0.231534 CGCAGCAGCTTCATCGTATG 59.768 55.000 0.00 0.00 39.10 2.39
3783 4106 0.877649 CCGCAGCAGCTTCATCGTAT 60.878 55.000 0.00 0.00 39.10 3.06
3784 4107 1.519234 CCGCAGCAGCTTCATCGTA 60.519 57.895 0.00 0.00 39.10 3.43
3785 4108 2.816958 CCGCAGCAGCTTCATCGT 60.817 61.111 0.00 0.00 39.10 3.73
3786 4109 3.570638 CCCGCAGCAGCTTCATCG 61.571 66.667 0.00 0.00 39.10 3.84
3787 4110 2.437359 ACCCGCAGCAGCTTCATC 60.437 61.111 0.00 0.00 39.10 2.92
3788 4111 2.749044 CACCCGCAGCAGCTTCAT 60.749 61.111 0.00 0.00 39.10 2.57
3799 4122 0.387878 CGAGAGATAGATGCACCCGC 60.388 60.000 0.00 0.00 39.24 6.13
3800 4123 0.242286 CCGAGAGATAGATGCACCCG 59.758 60.000 0.00 0.00 0.00 5.28
3801 4124 0.037790 GCCGAGAGATAGATGCACCC 60.038 60.000 0.00 0.00 0.00 4.61
3802 4125 0.037790 GGCCGAGAGATAGATGCACC 60.038 60.000 0.00 0.00 0.00 5.01
3803 4126 0.037790 GGGCCGAGAGATAGATGCAC 60.038 60.000 0.00 0.00 0.00 4.57
3804 4127 1.188219 GGGGCCGAGAGATAGATGCA 61.188 60.000 0.00 0.00 0.00 3.96
3805 4128 1.188219 TGGGGCCGAGAGATAGATGC 61.188 60.000 0.00 0.00 0.00 3.91
3806 4129 1.274728 CTTGGGGCCGAGAGATAGATG 59.725 57.143 0.00 0.00 0.00 2.90
3807 4130 1.148027 TCTTGGGGCCGAGAGATAGAT 59.852 52.381 0.00 0.00 32.98 1.98
3808 4131 0.556258 TCTTGGGGCCGAGAGATAGA 59.444 55.000 0.00 0.00 32.98 1.98
3809 4132 1.414158 TTCTTGGGGCCGAGAGATAG 58.586 55.000 8.07 0.00 37.71 2.08
3810 4133 1.874129 TTTCTTGGGGCCGAGAGATA 58.126 50.000 8.07 0.00 37.71 1.98
3811 4134 1.133976 CATTTCTTGGGGCCGAGAGAT 60.134 52.381 8.07 6.96 37.71 2.75
3812 4135 0.253044 CATTTCTTGGGGCCGAGAGA 59.747 55.000 8.07 5.07 37.71 3.10
3813 4136 0.035056 ACATTTCTTGGGGCCGAGAG 60.035 55.000 8.07 1.34 37.71 3.20
3814 4137 1.065709 GTACATTTCTTGGGGCCGAGA 60.066 52.381 0.00 0.00 34.86 4.04
3815 4138 1.379527 GTACATTTCTTGGGGCCGAG 58.620 55.000 0.00 0.00 0.00 4.63
3816 4139 0.034863 GGTACATTTCTTGGGGCCGA 60.035 55.000 0.00 0.00 0.00 5.54
3817 4140 0.322997 TGGTACATTTCTTGGGGCCG 60.323 55.000 0.00 0.00 0.00 6.13
3818 4141 3.681909 TGGTACATTTCTTGGGGCC 57.318 52.632 0.00 0.00 0.00 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.