Multiple sequence alignment - TraesCS7A01G018300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G018300 chr7A 100.000 4512 0 0 1 4512 7764603 7769114 0.000000e+00 8333.0
1 TraesCS7A01G018300 chr7A 82.030 1074 151 26 3070 4120 103215673 103214619 0.000000e+00 876.0
2 TraesCS7A01G018300 chr7A 100.000 313 0 0 4824 5136 7769426 7769738 3.450000e-161 579.0
3 TraesCS7A01G018300 chr7A 83.951 324 50 2 2701 3023 103216078 103215756 4.990000e-80 309.0
4 TraesCS7A01G018300 chr7D 90.557 4522 344 30 1 4510 6778673 6783123 0.000000e+00 5908.0
5 TraesCS7A01G018300 chr7D 82.770 1242 208 6 1475 2713 101097590 101096352 0.000000e+00 1103.0
6 TraesCS7A01G018300 chr7D 82.400 125 22 0 359 483 65527028 65527152 5.440000e-20 110.0
7 TraesCS7A01G018300 chr7D 90.625 64 6 0 2 65 194080911 194080974 9.160000e-13 86.1
8 TraesCS7A01G018300 chr7D 78.400 125 27 0 359 483 65520513 65520637 1.190000e-11 82.4
9 TraesCS7A01G018300 chr4A 89.007 3484 320 18 509 3986 733451861 733455287 0.000000e+00 4253.0
10 TraesCS7A01G018300 chr4A 89.711 3256 295 22 1267 4493 733423206 733419962 0.000000e+00 4120.0
11 TraesCS7A01G018300 chr4A 88.635 1663 139 24 1 1641 733424538 733422904 0.000000e+00 1978.0
12 TraesCS7A01G018300 chr4A 91.736 121 10 0 4392 4512 733600286 733600406 8.840000e-38 169.0
13 TraesCS7A01G018300 chrUn 90.732 2417 222 1 1570 3986 339774475 339776889 0.000000e+00 3221.0
14 TraesCS7A01G018300 chrUn 90.608 2417 225 1 1570 3986 339771814 339769400 0.000000e+00 3205.0
15 TraesCS7A01G018300 chrUn 88.347 2420 221 17 509 2922 334536516 334534152 0.000000e+00 2850.0
16 TraesCS7A01G018300 chrUn 90.786 1704 155 1 1570 3273 378061079 378062780 0.000000e+00 2276.0
17 TraesCS7A01G018300 chrUn 90.835 1353 124 0 1570 2922 408507537 408506185 0.000000e+00 1812.0
18 TraesCS7A01G018300 chrUn 90.452 796 76 0 3191 3986 464059170 464058375 0.000000e+00 1050.0
19 TraesCS7A01G018300 chrUn 91.102 708 63 0 3275 3982 467116536 467115829 0.000000e+00 959.0
20 TraesCS7A01G018300 chrUn 83.832 167 27 0 1403 1569 334535743 334535577 5.320000e-35 159.0
21 TraesCS7A01G018300 chr7B 82.260 1071 151 26 3070 4120 57634143 57633092 0.000000e+00 889.0
22 TraesCS7A01G018300 chr7B 89.062 64 7 0 2 65 157803172 157803235 4.260000e-11 80.5
23 TraesCS7A01G018300 chr6D 82.540 126 21 1 357 482 463797168 463797292 5.440000e-20 110.0
24 TraesCS7A01G018300 chr1D 81.102 127 24 0 357 483 368546859 368546733 9.100000e-18 102.0
25 TraesCS7A01G018300 chr2B 85.227 88 13 0 272 359 28351624 28351711 1.970000e-14 91.6
26 TraesCS7A01G018300 chr5A 79.365 126 25 1 359 483 154543765 154543640 2.550000e-13 87.9
27 TraesCS7A01G018300 chr5A 89.831 59 6 0 2 60 24199605 24199547 5.510000e-10 76.8
28 TraesCS7A01G018300 chr3D 90.625 64 6 0 2 65 535778345 535778282 9.160000e-13 86.1
29 TraesCS7A01G018300 chr3A 87.143 70 7 2 2 70 19358530 19358462 1.530000e-10 78.7
30 TraesCS7A01G018300 chr3A 86.765 68 8 1 2 68 741673385 741673452 1.980000e-09 75.0
31 TraesCS7A01G018300 chr1B 78.689 122 22 4 364 483 614782499 614782618 1.530000e-10 78.7
32 TraesCS7A01G018300 chr1B 77.778 126 27 1 359 483 537530908 537531033 5.510000e-10 76.8
33 TraesCS7A01G018300 chr5D 86.567 67 9 0 2 68 35658543 35658477 1.980000e-09 75.0
34 TraesCS7A01G018300 chr5D 85.714 63 6 3 3818 3878 323866819 323866880 4.290000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G018300 chr7A 7764603 7769738 5135 False 4456.0 8333 100.0000 1 5136 2 chr7A.!!$F1 5135
1 TraesCS7A01G018300 chr7A 103214619 103216078 1459 True 592.5 876 82.9905 2701 4120 2 chr7A.!!$R1 1419
2 TraesCS7A01G018300 chr7D 6778673 6783123 4450 False 5908.0 5908 90.5570 1 4510 1 chr7D.!!$F1 4509
3 TraesCS7A01G018300 chr7D 101096352 101097590 1238 True 1103.0 1103 82.7700 1475 2713 1 chr7D.!!$R1 1238
4 TraesCS7A01G018300 chr4A 733451861 733455287 3426 False 4253.0 4253 89.0070 509 3986 1 chr4A.!!$F1 3477
5 TraesCS7A01G018300 chr4A 733419962 733424538 4576 True 3049.0 4120 89.1730 1 4493 2 chr4A.!!$R1 4492
6 TraesCS7A01G018300 chrUn 339774475 339776889 2414 False 3221.0 3221 90.7320 1570 3986 1 chrUn.!!$F1 2416
7 TraesCS7A01G018300 chrUn 339769400 339771814 2414 True 3205.0 3205 90.6080 1570 3986 1 chrUn.!!$R1 2416
8 TraesCS7A01G018300 chrUn 378061079 378062780 1701 False 2276.0 2276 90.7860 1570 3273 1 chrUn.!!$F2 1703
9 TraesCS7A01G018300 chrUn 408506185 408507537 1352 True 1812.0 1812 90.8350 1570 2922 1 chrUn.!!$R2 1352
10 TraesCS7A01G018300 chrUn 334534152 334536516 2364 True 1504.5 2850 86.0895 509 2922 2 chrUn.!!$R5 2413
11 TraesCS7A01G018300 chrUn 464058375 464059170 795 True 1050.0 1050 90.4520 3191 3986 1 chrUn.!!$R3 795
12 TraesCS7A01G018300 chrUn 467115829 467116536 707 True 959.0 959 91.1020 3275 3982 1 chrUn.!!$R4 707
13 TraesCS7A01G018300 chr7B 57633092 57634143 1051 True 889.0 889 82.2600 3070 4120 1 chr7B.!!$R1 1050

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 351 1.692519 CCCTACCGCTATAAGCACCTT 59.307 52.381 0.00 0.00 42.58 3.50 F
1399 1428 0.465705 GAACATGCTCTCCGGGATGA 59.534 55.000 0.00 0.00 38.21 2.92 F
1469 1570 0.035152 TTGAACATGCTCGCCTGGAT 60.035 50.000 0.00 0.00 0.00 3.41 F
2532 2633 0.107017 GCAAGATCCCAGCTGGCTTA 60.107 55.000 28.39 14.95 29.52 3.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1449 1550 0.035152 TCCAGGCGAGCATGTTCAAT 60.035 50.0 10.36 0.0 0.00 2.57 R
2532 2633 0.034616 GCAATCCGCTCAGCCTAGAT 59.965 55.0 0.00 0.0 37.77 1.98 R
3375 3514 0.036294 GCGGGTAGAGGTGCTTTTCT 60.036 55.0 0.00 0.0 0.00 2.52 R
4291 4470 0.036732 CCACACCTGCTGCCTTCTTA 59.963 55.0 0.00 0.0 0.00 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 5.463051 AGGAAGTAGTAGGTAGGCACTTA 57.537 43.478 0.00 0.00 41.75 2.24
126 128 4.789807 TCTATCCCACTTAGCTCGTTACT 58.210 43.478 0.00 0.00 0.00 2.24
213 215 2.589798 TTACCCCTTTGCGTATCTCG 57.410 50.000 0.00 0.00 43.12 4.04
333 338 2.126071 CACACGCAGACCCTACCG 60.126 66.667 0.00 0.00 0.00 4.02
346 351 1.692519 CCCTACCGCTATAAGCACCTT 59.307 52.381 0.00 0.00 42.58 3.50
361 366 3.450457 AGCACCTTCGAGAGATTGAGAAT 59.550 43.478 0.00 0.00 41.60 2.40
407 412 6.901081 TCGCTAGAGATCCTGAAATGAATA 57.099 37.500 0.00 0.00 0.00 1.75
428 434 9.836864 TGAATACAGAAATAATGTGAGCACTAT 57.163 29.630 1.99 0.00 32.02 2.12
475 481 2.632537 ACCACTGTCCTCCTAACCATT 58.367 47.619 0.00 0.00 0.00 3.16
575 581 6.183360 CGTAGTCAAAGTCATACGTAGAAGGA 60.183 42.308 0.08 0.00 36.99 3.36
581 587 8.525316 TCAAAGTCATACGTAGAAGGACATAAA 58.475 33.333 16.62 3.27 0.00 1.40
752 760 6.475207 AGCATTTTTGTACGCTAATTAGTCG 58.525 36.000 20.41 20.41 31.60 4.18
863 873 4.789075 TTAGGCACGGCGCTCGAC 62.789 66.667 22.10 13.93 42.43 4.20
885 895 5.330233 ACCTCCAACCTTTATAAAACCCTG 58.670 41.667 0.00 0.00 0.00 4.45
923 933 2.672961 TCTTGCTCTAACCATCACCG 57.327 50.000 0.00 0.00 0.00 4.94
998 1008 4.862092 CGGCGCGTGCTCTCATCT 62.862 66.667 21.89 0.00 42.25 2.90
1000 1010 2.202663 GCGCGTGCTCTCATCTCA 60.203 61.111 15.02 0.00 38.39 3.27
1001 1011 1.591059 GCGCGTGCTCTCATCTCAT 60.591 57.895 15.02 0.00 38.39 2.90
1002 1012 1.819226 GCGCGTGCTCTCATCTCATG 61.819 60.000 15.02 0.00 38.39 3.07
1027 1047 2.519302 CAATCACGGCCCCCATCC 60.519 66.667 0.00 0.00 0.00 3.51
1043 1072 3.201708 CCCATCCTCACATTTCTCCTCTT 59.798 47.826 0.00 0.00 0.00 2.85
1044 1073 4.450053 CCATCCTCACATTTCTCCTCTTC 58.550 47.826 0.00 0.00 0.00 2.87
1045 1074 4.163839 CCATCCTCACATTTCTCCTCTTCT 59.836 45.833 0.00 0.00 0.00 2.85
1046 1075 5.339035 CCATCCTCACATTTCTCCTCTTCTT 60.339 44.000 0.00 0.00 0.00 2.52
1047 1076 5.413309 TCCTCACATTTCTCCTCTTCTTC 57.587 43.478 0.00 0.00 0.00 2.87
1048 1077 5.090139 TCCTCACATTTCTCCTCTTCTTCT 58.910 41.667 0.00 0.00 0.00 2.85
1068 1097 4.641645 CTCCACACCGCAAGCCCA 62.642 66.667 0.00 0.00 0.00 5.36
1107 1136 2.556287 GACCGCTCCGTGCTTTTG 59.444 61.111 0.00 0.00 40.11 2.44
1140 1169 4.404098 GTGTCCGGCGACCCCAAT 62.404 66.667 9.30 0.00 38.32 3.16
1191 1220 1.822186 GTGCAACTGGACCGGTGTT 60.822 57.895 14.63 7.55 0.00 3.32
1215 1244 3.188786 GACACGGAGCGCCATGTC 61.189 66.667 19.66 19.66 35.12 3.06
1239 1268 8.636843 GTCGTCAAGTTAATACTAAGTGAACAG 58.363 37.037 0.00 0.00 33.17 3.16
1240 1269 8.570488 TCGTCAAGTTAATACTAAGTGAACAGA 58.430 33.333 0.00 0.00 33.17 3.41
1258 1287 2.570582 GAAGCTCTCTGGCAGGGTCG 62.571 65.000 15.27 8.13 34.17 4.79
1259 1288 3.386237 GCTCTCTGGCAGGGTCGT 61.386 66.667 15.27 0.00 0.00 4.34
1281 1310 3.793144 GCGCTTGGCAACCTCTCG 61.793 66.667 0.00 0.00 42.87 4.04
1372 1401 3.493334 TCCTACCTCAAGTTTCTCGACA 58.507 45.455 0.00 0.00 0.00 4.35
1385 1414 3.961480 TCTCGACATGTCCTTGAACAT 57.039 42.857 20.03 0.00 40.49 2.71
1397 1426 0.911769 TTGAACATGCTCTCCGGGAT 59.088 50.000 0.00 0.00 0.00 3.85
1399 1428 0.465705 GAACATGCTCTCCGGGATGA 59.534 55.000 0.00 0.00 38.21 2.92
1413 1514 0.602372 GGATGATTCCGCCAGAGCTC 60.602 60.000 5.27 5.27 36.60 4.09
1416 1517 3.077556 ATTCCGCCAGAGCTCGGT 61.078 61.111 20.69 0.00 45.44 4.69
1444 1545 0.989890 CCGCCTAAAGTTTCTCGACG 59.010 55.000 0.00 0.00 0.00 5.12
1449 1550 3.635331 CCTAAAGTTTCTCGACGTGTCA 58.365 45.455 0.00 0.00 0.00 3.58
1451 1552 4.684703 CCTAAAGTTTCTCGACGTGTCATT 59.315 41.667 0.00 0.00 0.00 2.57
1462 1563 1.460743 ACGTGTCATTGAACATGCTCG 59.539 47.619 0.00 2.75 39.33 5.03
1465 1566 1.089920 GTCATTGAACATGCTCGCCT 58.910 50.000 0.00 0.00 0.00 5.52
1469 1570 0.035152 TTGAACATGCTCGCCTGGAT 60.035 50.000 0.00 0.00 0.00 3.41
1497 1598 0.107703 CGGAGCTTGGCAACCTATCA 60.108 55.000 0.00 0.00 0.00 2.15
1516 1617 2.069273 CACGCCTCAAGTTTCTCGATT 58.931 47.619 0.00 0.00 0.00 3.34
1664 1765 2.508887 GACGCAGCTCAGCCTCAG 60.509 66.667 0.00 0.00 0.00 3.35
1674 1775 1.600636 CAGCCTCAGCGGAAACCAA 60.601 57.895 0.00 0.00 46.67 3.67
1728 1829 1.401761 TTCGGCGCTTGGTATACCTA 58.598 50.000 22.41 14.31 36.82 3.08
1815 1916 5.004922 TGCACTACATTGATATGTCGTCA 57.995 39.130 0.00 0.00 43.81 4.35
1826 1927 4.862574 TGATATGTCGTCAAACTTTCTCGG 59.137 41.667 0.00 0.00 0.00 4.63
1831 1932 1.227704 TCAAACTTTCTCGGCGGCA 60.228 52.632 10.53 0.00 0.00 5.69
1863 1964 4.115199 GCGGATTGCCCACTCCCT 62.115 66.667 0.00 0.00 37.76 4.20
1872 1973 1.915266 CCCACTCCCTGAGCTGACA 60.915 63.158 0.00 0.00 32.04 3.58
1885 1986 1.639298 GCTGACATCCCTCGTGTTGC 61.639 60.000 0.00 0.00 0.00 4.17
1900 2001 2.410466 TTGCGGTCCAACAAACTCC 58.590 52.632 0.00 0.00 0.00 3.85
1907 2008 0.179004 TCCAACAAACTCCATGGCGT 60.179 50.000 6.96 3.49 32.87 5.68
1932 2033 0.249868 CCCGCTCACTGTCAAACTCA 60.250 55.000 0.00 0.00 0.00 3.41
2013 2114 1.063649 CATGTTCAGCGGCATGAGC 59.936 57.895 1.45 0.25 43.60 4.26
2015 2116 0.961857 ATGTTCAGCGGCATGAGCAA 60.962 50.000 17.42 0.52 42.58 3.91
2044 2145 0.736053 TTTGCACCTGTCGTTCAACC 59.264 50.000 0.00 0.00 26.57 3.77
2079 2180 1.104577 GGAACAACACCGGCCTTGAA 61.105 55.000 16.62 0.00 0.00 2.69
2111 2212 2.561373 GCTTACCAACTGCACCGC 59.439 61.111 0.00 0.00 0.00 5.68
2112 2213 2.860293 CTTACCAACTGCACCGCG 59.140 61.111 0.00 0.00 0.00 6.46
2256 2357 2.229792 GCAAACATCTCCAACCTCACA 58.770 47.619 0.00 0.00 0.00 3.58
2388 2489 2.188817 GGTGATATCCCGCTATCCCTT 58.811 52.381 0.00 0.00 0.00 3.95
2427 2528 1.001158 GGGGTCGTCAATTTTTCGCAA 60.001 47.619 0.00 0.00 0.00 4.85
2474 2575 3.005823 GCATCGTGCAATGTGTGAC 57.994 52.632 0.00 0.00 44.26 3.67
2479 2580 0.179217 CGTGCAATGTGTGACGATGG 60.179 55.000 0.00 0.00 34.62 3.51
2497 2598 5.104776 ACGATGGAAAATCTTGATCTCTCCA 60.105 40.000 0.00 9.30 36.02 3.86
2532 2633 0.107017 GCAAGATCCCAGCTGGCTTA 60.107 55.000 28.39 14.95 29.52 3.09
2575 2676 3.883744 CTCAACCTCGCGGGCAACT 62.884 63.158 6.13 0.00 39.10 3.16
2578 2679 3.767630 AACCTCGCGGGCAACTTGT 62.768 57.895 6.13 0.00 39.10 3.16
2868 2969 1.847328 TCCTCGGCAATGACAGACTA 58.153 50.000 0.00 0.00 0.00 2.59
2902 3003 3.499737 CGATGACGCCTGGGTTGC 61.500 66.667 0.00 0.00 0.00 4.17
2916 3017 3.636231 TTGCCTAGGTGCAGCGGT 61.636 61.111 11.31 0.00 43.21 5.68
3003 3104 0.748450 CGATGGCAATCATTGGGCTT 59.252 50.000 1.12 0.00 35.97 4.35
3038 3168 4.329545 GGGACAAGACAGGCGGCA 62.330 66.667 13.08 0.00 0.00 5.69
3060 3190 1.447838 ACCGTTGCTACCATGCGAG 60.448 57.895 0.00 0.00 35.36 5.03
3065 3195 2.590007 GCTACCATGCGAGCCCAG 60.590 66.667 5.92 0.00 32.25 4.45
3119 3258 2.278271 GCTCTACGAGGCGACTGC 60.278 66.667 0.00 0.00 44.43 4.40
3132 3271 4.681978 ACTGCCGGGTTCGAGCAC 62.682 66.667 2.18 0.00 37.54 4.40
3264 3403 1.302192 CCGGAGTTTCAAGCGGGAA 60.302 57.895 0.00 0.00 0.00 3.97
3375 3514 2.104792 GCTGATGACCAATGGTAGCCTA 59.895 50.000 12.63 0.00 35.25 3.93
3378 3517 4.037222 TGATGACCAATGGTAGCCTAGAA 58.963 43.478 4.23 0.00 35.25 2.10
3380 3519 4.919774 TGACCAATGGTAGCCTAGAAAA 57.080 40.909 4.23 0.00 35.25 2.29
3381 3520 4.843728 TGACCAATGGTAGCCTAGAAAAG 58.156 43.478 4.23 0.00 35.25 2.27
3477 3616 1.229359 CGAGGGGCTCACCTACCTA 59.771 63.158 0.00 0.00 42.10 3.08
3581 3720 4.733371 TGACTTCGGCATCGCGCA 62.733 61.111 8.75 0.00 45.17 6.09
3604 3752 1.003839 GTCAAGGACATGGGCGACA 60.004 57.895 0.00 0.00 32.09 4.35
3660 3808 1.526575 CTGCCGGATTGTTGCAAGGT 61.527 55.000 5.05 0.00 34.06 3.50
3705 3854 6.580791 CAGGTAATTTACAACACAACCGAATG 59.419 38.462 8.73 0.00 0.00 2.67
3718 3867 6.989759 ACACAACCGAATGAACATAGCATATA 59.010 34.615 0.00 0.00 0.00 0.86
3783 3952 2.539338 GGCGTTCTTGTTGCGTGGA 61.539 57.895 0.00 0.00 0.00 4.02
3955 4130 2.398554 GCATGACGTCACCGCCATT 61.399 57.895 22.71 0.00 34.79 3.16
3968 4143 0.301687 CGCCATTATCGCACAGTCAC 59.698 55.000 0.00 0.00 0.00 3.67
3997 4172 1.945819 GCCACGGACATGATGTTGTCT 60.946 52.381 0.00 0.00 44.39 3.41
4019 4194 1.210870 GGTACAAGCGAACAACGTCA 58.789 50.000 0.00 0.00 44.60 4.35
4021 4196 2.222445 GGTACAAGCGAACAACGTCATT 59.778 45.455 0.00 0.00 44.60 2.57
4132 4307 3.832490 TCCTCAAGGATTCGTCTTCTTCA 59.168 43.478 0.00 0.00 39.78 3.02
4137 4312 4.808414 AGGATTCGTCTTCTTCATGACA 57.192 40.909 0.00 0.00 33.18 3.58
4154 4329 6.094719 TCATGACATACTTGTGGTTACGTAC 58.905 40.000 0.00 0.00 35.79 3.67
4188 4363 3.990318 TGTGGTAGACTCATAGCATCG 57.010 47.619 0.00 0.00 35.75 3.84
4197 4372 6.503589 AGACTCATAGCATCGAGGTTATAC 57.496 41.667 6.12 0.26 33.36 1.47
4291 4470 5.086104 ACGTAAGGAGATGTGCAAGTAAT 57.914 39.130 0.00 0.00 46.39 1.89
4311 4490 1.999634 AAGAAGGCAGCAGGTGTGGT 62.000 55.000 0.66 0.00 33.53 4.16
4313 4492 0.674895 GAAGGCAGCAGGTGTGGTAG 60.675 60.000 0.66 0.00 31.49 3.18
4328 4507 1.360852 TGGTAGGGGAGTACGGGTTAA 59.639 52.381 0.00 0.00 0.00 2.01
4333 4512 2.710471 AGGGGAGTACGGGTTAAAAACA 59.290 45.455 0.00 0.00 0.00 2.83
4343 4522 6.712179 ACGGGTTAAAAACAATCCTTGTAA 57.288 33.333 0.00 0.00 44.59 2.41
4348 4527 8.198778 GGGTTAAAAACAATCCTTGTAAGTTGA 58.801 33.333 0.00 0.00 44.59 3.18
4349 4528 9.758651 GGTTAAAAACAATCCTTGTAAGTTGAT 57.241 29.630 0.00 0.00 44.59 2.57
4351 4530 9.757227 TTAAAAACAATCCTTGTAAGTTGATGG 57.243 29.630 0.00 0.00 44.59 3.51
4352 4531 6.976934 AAACAATCCTTGTAAGTTGATGGT 57.023 33.333 0.00 0.00 44.59 3.55
4353 4532 8.472007 AAAACAATCCTTGTAAGTTGATGGTA 57.528 30.769 0.00 0.00 44.59 3.25
4354 4533 8.472007 AAACAATCCTTGTAAGTTGATGGTAA 57.528 30.769 0.00 0.00 44.59 2.85
4355 4534 8.650143 AACAATCCTTGTAAGTTGATGGTAAT 57.350 30.769 0.00 0.00 44.59 1.89
4371 4550 9.448438 TTGATGGTAATATGGTATTGAGTATGC 57.552 33.333 0.00 0.00 0.00 3.14
4438 4651 7.098074 TGATGCAATTGTATAAGCACATGAA 57.902 32.000 9.16 0.00 40.14 2.57
4453 4666 1.678627 CATGAACCGGTGGTGTTTTCA 59.321 47.619 8.52 6.60 35.34 2.69
4495 4708 3.376234 GCAACTTGATAAGCAGCAGATCA 59.624 43.478 5.36 5.36 33.40 2.92
4496 4709 4.036498 GCAACTTGATAAGCAGCAGATCAT 59.964 41.667 9.43 0.00 33.40 2.45
4502 4715 6.655078 TGATAAGCAGCAGATCATGTAGTA 57.345 37.500 5.36 0.00 0.00 1.82
4510 4723 4.021280 AGCAGATCATGTAGTAGAGGCATG 60.021 45.833 0.00 0.00 40.76 4.06
4511 4724 4.818642 CAGATCATGTAGTAGAGGCATGG 58.181 47.826 0.00 0.00 40.07 3.66
4844 5057 3.873910 GTGTATAGTGAACCCTGCATGT 58.126 45.455 0.00 0.00 0.00 3.21
4845 5058 4.261801 GTGTATAGTGAACCCTGCATGTT 58.738 43.478 1.70 1.70 0.00 2.71
4846 5059 4.094887 GTGTATAGTGAACCCTGCATGTTG 59.905 45.833 6.50 0.00 0.00 3.33
4847 5060 2.198827 TAGTGAACCCTGCATGTTGG 57.801 50.000 6.50 0.00 0.00 3.77
4848 5061 0.185901 AGTGAACCCTGCATGTTGGT 59.814 50.000 6.50 0.00 0.00 3.67
4849 5062 1.423541 AGTGAACCCTGCATGTTGGTA 59.576 47.619 6.50 0.00 0.00 3.25
4850 5063 2.041620 AGTGAACCCTGCATGTTGGTAT 59.958 45.455 6.50 0.00 0.00 2.73
4851 5064 3.265737 AGTGAACCCTGCATGTTGGTATA 59.734 43.478 6.50 0.00 0.00 1.47
4852 5065 3.627577 GTGAACCCTGCATGTTGGTATAG 59.372 47.826 6.50 0.00 0.00 1.31
4853 5066 3.265737 TGAACCCTGCATGTTGGTATAGT 59.734 43.478 6.50 0.00 0.00 2.12
4854 5067 3.281727 ACCCTGCATGTTGGTATAGTG 57.718 47.619 0.00 0.00 0.00 2.74
4855 5068 2.843730 ACCCTGCATGTTGGTATAGTGA 59.156 45.455 0.00 0.00 0.00 3.41
4856 5069 3.265737 ACCCTGCATGTTGGTATAGTGAA 59.734 43.478 0.00 0.00 0.00 3.18
4857 5070 3.879295 CCCTGCATGTTGGTATAGTGAAG 59.121 47.826 0.00 0.00 0.00 3.02
4858 5071 3.879295 CCTGCATGTTGGTATAGTGAAGG 59.121 47.826 0.00 0.00 29.64 3.46
4859 5072 3.278574 TGCATGTTGGTATAGTGAAGGC 58.721 45.455 0.00 0.00 0.00 4.35
4860 5073 3.278574 GCATGTTGGTATAGTGAAGGCA 58.721 45.455 0.00 0.00 0.00 4.75
4861 5074 3.065371 GCATGTTGGTATAGTGAAGGCAC 59.935 47.826 0.00 0.00 45.49 5.01
4872 5085 3.273919 GTGAAGGCACATGTTGAAGAC 57.726 47.619 0.00 0.00 44.51 3.01
4873 5086 2.880890 GTGAAGGCACATGTTGAAGACT 59.119 45.455 0.00 0.00 44.51 3.24
4874 5087 2.880268 TGAAGGCACATGTTGAAGACTG 59.120 45.455 0.00 0.00 0.00 3.51
4875 5088 1.242076 AGGCACATGTTGAAGACTGC 58.758 50.000 0.00 0.00 0.00 4.40
4876 5089 0.953727 GGCACATGTTGAAGACTGCA 59.046 50.000 0.00 0.00 30.76 4.41
4877 5090 1.337703 GGCACATGTTGAAGACTGCAA 59.662 47.619 0.00 0.00 30.76 4.08
4878 5091 2.223782 GGCACATGTTGAAGACTGCAAA 60.224 45.455 0.00 0.00 30.76 3.68
4879 5092 3.553508 GGCACATGTTGAAGACTGCAAAT 60.554 43.478 0.00 0.00 30.76 2.32
4880 5093 4.321156 GGCACATGTTGAAGACTGCAAATA 60.321 41.667 0.00 0.00 30.76 1.40
4881 5094 4.855388 GCACATGTTGAAGACTGCAAATAG 59.145 41.667 0.00 0.00 29.90 1.73
4882 5095 5.335113 GCACATGTTGAAGACTGCAAATAGA 60.335 40.000 0.00 0.00 29.90 1.98
4883 5096 6.671190 CACATGTTGAAGACTGCAAATAGAA 58.329 36.000 0.00 0.00 0.00 2.10
4884 5097 6.800408 CACATGTTGAAGACTGCAAATAGAAG 59.200 38.462 0.00 0.00 0.00 2.85
4885 5098 6.488006 ACATGTTGAAGACTGCAAATAGAAGT 59.512 34.615 0.00 0.00 39.51 3.01
4886 5099 6.942532 TGTTGAAGACTGCAAATAGAAGTT 57.057 33.333 0.00 0.00 35.73 2.66
4887 5100 6.728200 TGTTGAAGACTGCAAATAGAAGTTG 58.272 36.000 0.00 0.00 35.73 3.16
4888 5101 6.318648 TGTTGAAGACTGCAAATAGAAGTTGT 59.681 34.615 0.00 0.00 35.73 3.32
4889 5102 6.545504 TGAAGACTGCAAATAGAAGTTGTC 57.454 37.500 0.00 0.00 35.73 3.18
4890 5103 6.054941 TGAAGACTGCAAATAGAAGTTGTCA 58.945 36.000 0.00 0.00 35.73 3.58
4891 5104 5.931441 AGACTGCAAATAGAAGTTGTCAC 57.069 39.130 0.00 0.00 35.73 3.67
4892 5105 4.449068 AGACTGCAAATAGAAGTTGTCACG 59.551 41.667 0.00 0.00 35.73 4.35
4893 5106 4.377021 ACTGCAAATAGAAGTTGTCACGA 58.623 39.130 0.00 0.00 28.92 4.35
4894 5107 4.997395 ACTGCAAATAGAAGTTGTCACGAT 59.003 37.500 0.00 0.00 28.92 3.73
4895 5108 6.163476 ACTGCAAATAGAAGTTGTCACGATA 58.837 36.000 0.00 0.00 28.92 2.92
4896 5109 6.090898 ACTGCAAATAGAAGTTGTCACGATAC 59.909 38.462 0.00 0.00 28.92 2.24
4897 5110 5.350365 TGCAAATAGAAGTTGTCACGATACC 59.650 40.000 0.00 0.00 0.00 2.73
4898 5111 5.350365 GCAAATAGAAGTTGTCACGATACCA 59.650 40.000 0.00 0.00 0.00 3.25
4899 5112 6.672357 GCAAATAGAAGTTGTCACGATACCAC 60.672 42.308 0.00 0.00 0.00 4.16
4900 5113 5.654603 ATAGAAGTTGTCACGATACCACA 57.345 39.130 0.00 0.00 0.00 4.17
4901 5114 4.330944 AGAAGTTGTCACGATACCACAA 57.669 40.909 0.00 0.00 0.00 3.33
4902 5115 4.699637 AGAAGTTGTCACGATACCACAAA 58.300 39.130 0.00 0.00 31.95 2.83
4903 5116 5.120399 AGAAGTTGTCACGATACCACAAAA 58.880 37.500 0.00 0.00 31.95 2.44
4904 5117 5.587043 AGAAGTTGTCACGATACCACAAAAA 59.413 36.000 0.00 0.00 31.95 1.94
4905 5118 5.418310 AGTTGTCACGATACCACAAAAAG 57.582 39.130 0.00 0.00 31.95 2.27
4906 5119 5.120399 AGTTGTCACGATACCACAAAAAGA 58.880 37.500 0.00 0.00 31.95 2.52
4907 5120 5.236478 AGTTGTCACGATACCACAAAAAGAG 59.764 40.000 0.00 0.00 31.95 2.85
4908 5121 4.699637 TGTCACGATACCACAAAAAGAGT 58.300 39.130 0.00 0.00 0.00 3.24
4909 5122 4.509970 TGTCACGATACCACAAAAAGAGTG 59.490 41.667 0.00 0.00 36.76 3.51
4910 5123 4.748102 GTCACGATACCACAAAAAGAGTGA 59.252 41.667 0.00 0.00 39.30 3.41
4911 5124 5.408604 GTCACGATACCACAAAAAGAGTGAT 59.591 40.000 0.00 0.00 39.30 3.06
4912 5125 5.408299 TCACGATACCACAAAAAGAGTGATG 59.592 40.000 0.00 0.00 39.30 3.07
4913 5126 4.695455 ACGATACCACAAAAAGAGTGATGG 59.305 41.667 0.00 0.00 39.30 3.51
4914 5127 4.695455 CGATACCACAAAAAGAGTGATGGT 59.305 41.667 0.00 0.00 42.90 3.55
4915 5128 5.390885 CGATACCACAAAAAGAGTGATGGTG 60.391 44.000 3.99 0.00 40.60 4.17
4916 5129 3.648339 CCACAAAAAGAGTGATGGTGG 57.352 47.619 0.00 0.00 39.30 4.61
4917 5130 2.288395 CCACAAAAAGAGTGATGGTGGC 60.288 50.000 0.00 0.00 39.30 5.01
4918 5131 1.963515 ACAAAAAGAGTGATGGTGGCC 59.036 47.619 0.00 0.00 0.00 5.36
4919 5132 1.273327 CAAAAAGAGTGATGGTGGCCC 59.727 52.381 0.00 0.00 0.00 5.80
4921 5134 0.038744 AAAGAGTGATGGTGGCCCAG 59.961 55.000 0.00 0.00 46.15 4.45
4922 5135 1.136329 AAGAGTGATGGTGGCCCAGT 61.136 55.000 0.00 0.00 46.15 4.00
4923 5136 1.078143 GAGTGATGGTGGCCCAGTC 60.078 63.158 0.00 0.00 46.15 3.51
4924 5137 1.539869 AGTGATGGTGGCCCAGTCT 60.540 57.895 0.00 0.00 46.15 3.24
4925 5138 1.078143 GTGATGGTGGCCCAGTCTC 60.078 63.158 0.00 0.00 46.15 3.36
4926 5139 1.229625 TGATGGTGGCCCAGTCTCT 60.230 57.895 0.00 0.00 46.15 3.10
4927 5140 1.267574 TGATGGTGGCCCAGTCTCTC 61.268 60.000 0.00 0.00 46.15 3.20
4928 5141 1.229625 ATGGTGGCCCAGTCTCTCA 60.230 57.895 0.00 0.00 46.15 3.27
4929 5142 0.842030 ATGGTGGCCCAGTCTCTCAA 60.842 55.000 0.00 0.00 46.15 3.02
4930 5143 1.059584 TGGTGGCCCAGTCTCTCAAA 61.060 55.000 0.00 0.00 35.17 2.69
4931 5144 0.322008 GGTGGCCCAGTCTCTCAAAG 60.322 60.000 0.00 0.00 0.00 2.77
4932 5145 0.322008 GTGGCCCAGTCTCTCAAAGG 60.322 60.000 0.00 0.00 0.00 3.11
4933 5146 0.768221 TGGCCCAGTCTCTCAAAGGT 60.768 55.000 0.00 0.00 0.00 3.50
4934 5147 1.276622 GGCCCAGTCTCTCAAAGGTA 58.723 55.000 0.00 0.00 0.00 3.08
4935 5148 1.066071 GGCCCAGTCTCTCAAAGGTAC 60.066 57.143 0.00 0.00 0.00 3.34
4937 5150 2.093921 GCCCAGTCTCTCAAAGGTACTC 60.094 54.545 0.00 0.00 38.49 2.59
4938 5151 2.164624 CCCAGTCTCTCAAAGGTACTCG 59.835 54.545 0.00 0.00 38.49 4.18
4939 5152 2.820787 CCAGTCTCTCAAAGGTACTCGT 59.179 50.000 0.00 0.00 38.49 4.18
4940 5153 4.008330 CCAGTCTCTCAAAGGTACTCGTA 58.992 47.826 0.00 0.00 38.49 3.43
4941 5154 4.641094 CCAGTCTCTCAAAGGTACTCGTAT 59.359 45.833 0.00 0.00 38.49 3.06
4942 5155 5.449314 CCAGTCTCTCAAAGGTACTCGTATG 60.449 48.000 0.00 0.00 38.49 2.39
4943 5156 5.354513 CAGTCTCTCAAAGGTACTCGTATGA 59.645 44.000 0.00 0.00 38.49 2.15
4944 5157 5.944599 AGTCTCTCAAAGGTACTCGTATGAA 59.055 40.000 0.00 0.00 38.49 2.57
4945 5158 6.603997 AGTCTCTCAAAGGTACTCGTATGAAT 59.396 38.462 0.00 0.00 38.49 2.57
4946 5159 7.774157 AGTCTCTCAAAGGTACTCGTATGAATA 59.226 37.037 0.00 0.00 38.49 1.75
4947 5160 7.856894 GTCTCTCAAAGGTACTCGTATGAATAC 59.143 40.741 0.00 0.00 38.49 1.89
4948 5161 7.555195 TCTCTCAAAGGTACTCGTATGAATACA 59.445 37.037 5.95 0.00 38.49 2.29
4949 5162 8.058667 TCTCAAAGGTACTCGTATGAATACAA 57.941 34.615 5.95 0.00 38.49 2.41
4950 5163 8.692710 TCTCAAAGGTACTCGTATGAATACAAT 58.307 33.333 5.95 0.00 38.49 2.71
4951 5164 8.642908 TCAAAGGTACTCGTATGAATACAATG 57.357 34.615 5.95 2.17 38.49 2.82
4952 5165 8.255206 TCAAAGGTACTCGTATGAATACAATGT 58.745 33.333 5.95 0.00 38.49 2.71
4953 5166 8.328146 CAAAGGTACTCGTATGAATACAATGTG 58.672 37.037 5.95 0.00 38.49 3.21
4954 5167 5.983720 AGGTACTCGTATGAATACAATGTGC 59.016 40.000 5.95 0.00 28.46 4.57
4955 5168 5.176958 GGTACTCGTATGAATACAATGTGCC 59.823 44.000 5.95 0.00 28.46 5.01
4956 5169 5.023533 ACTCGTATGAATACAATGTGCCT 57.976 39.130 0.00 0.00 32.87 4.75
4957 5170 5.050490 ACTCGTATGAATACAATGTGCCTC 58.950 41.667 0.00 0.00 32.87 4.70
4958 5171 4.377021 TCGTATGAATACAATGTGCCTCC 58.623 43.478 0.00 0.00 32.87 4.30
4959 5172 4.126437 CGTATGAATACAATGTGCCTCCA 58.874 43.478 0.00 0.00 32.87 3.86
4960 5173 4.756642 CGTATGAATACAATGTGCCTCCAT 59.243 41.667 0.00 0.00 32.87 3.41
4961 5174 5.239306 CGTATGAATACAATGTGCCTCCATT 59.761 40.000 0.00 0.00 35.45 3.16
4962 5175 5.779529 ATGAATACAATGTGCCTCCATTC 57.220 39.130 0.00 0.00 32.81 2.67
4963 5176 4.598022 TGAATACAATGTGCCTCCATTCA 58.402 39.130 0.00 0.00 32.81 2.57
4964 5177 5.202765 TGAATACAATGTGCCTCCATTCAT 58.797 37.500 0.00 0.00 32.81 2.57
4965 5178 5.068067 TGAATACAATGTGCCTCCATTCATG 59.932 40.000 0.00 0.00 32.81 3.07
4966 5179 1.479323 ACAATGTGCCTCCATTCATGC 59.521 47.619 0.00 0.00 32.81 4.06
4967 5180 0.742505 AATGTGCCTCCATTCATGCG 59.257 50.000 0.00 0.00 29.02 4.73
4968 5181 1.105167 ATGTGCCTCCATTCATGCGG 61.105 55.000 0.00 0.00 0.00 5.69
4969 5182 1.451927 GTGCCTCCATTCATGCGGA 60.452 57.895 0.00 0.00 0.00 5.54
4970 5183 0.820891 GTGCCTCCATTCATGCGGAT 60.821 55.000 0.00 0.00 0.00 4.18
4971 5184 0.820482 TGCCTCCATTCATGCGGATG 60.820 55.000 11.15 11.15 0.00 3.51
4972 5185 0.535780 GCCTCCATTCATGCGGATGA 60.536 55.000 16.33 16.33 36.78 2.92
4973 5186 1.520494 CCTCCATTCATGCGGATGAG 58.480 55.000 19.31 9.26 39.81 2.90
4974 5187 1.202734 CCTCCATTCATGCGGATGAGT 60.203 52.381 19.31 14.34 39.81 3.41
4975 5188 1.871676 CTCCATTCATGCGGATGAGTG 59.128 52.381 28.00 28.00 42.95 3.51
4976 5189 1.210234 TCCATTCATGCGGATGAGTGT 59.790 47.619 30.64 15.73 42.18 3.55
4977 5190 2.433970 TCCATTCATGCGGATGAGTGTA 59.566 45.455 30.64 19.29 42.18 2.90
4978 5191 3.071457 TCCATTCATGCGGATGAGTGTAT 59.929 43.478 30.64 16.27 42.18 2.29
4979 5192 3.187842 CCATTCATGCGGATGAGTGTATG 59.812 47.826 30.64 24.16 42.18 2.39
4980 5193 3.541996 TTCATGCGGATGAGTGTATGT 57.458 42.857 19.31 0.00 39.81 2.29
4981 5194 2.825205 TCATGCGGATGAGTGTATGTG 58.175 47.619 16.33 0.00 33.40 3.21
4982 5195 1.262417 CATGCGGATGAGTGTATGTGC 59.738 52.381 12.09 0.00 0.00 4.57
4983 5196 0.805711 TGCGGATGAGTGTATGTGCG 60.806 55.000 0.00 0.00 0.00 5.34
4984 5197 1.927210 CGGATGAGTGTATGTGCGC 59.073 57.895 0.00 0.00 0.00 6.09
4985 5198 0.805711 CGGATGAGTGTATGTGCGCA 60.806 55.000 5.66 5.66 0.00 6.09
4986 5199 1.586422 GGATGAGTGTATGTGCGCAT 58.414 50.000 15.91 18.22 39.03 4.73
4987 5200 2.754472 GGATGAGTGTATGTGCGCATA 58.246 47.619 15.91 15.90 36.58 3.14
4988 5201 3.329386 GGATGAGTGTATGTGCGCATAT 58.671 45.455 23.43 23.43 39.49 1.78
4989 5202 4.494484 GGATGAGTGTATGTGCGCATATA 58.506 43.478 21.26 21.26 39.49 0.86
4990 5203 4.929211 GGATGAGTGTATGTGCGCATATAA 59.071 41.667 25.75 12.36 39.49 0.98
4991 5204 5.062683 GGATGAGTGTATGTGCGCATATAAG 59.937 44.000 25.75 0.00 39.49 1.73
4992 5205 5.195001 TGAGTGTATGTGCGCATATAAGA 57.805 39.130 25.75 14.20 39.49 2.10
4993 5206 5.222631 TGAGTGTATGTGCGCATATAAGAG 58.777 41.667 25.75 0.00 39.49 2.85
4994 5207 3.990469 AGTGTATGTGCGCATATAAGAGC 59.010 43.478 25.75 15.07 39.49 4.09
4995 5208 3.990469 GTGTATGTGCGCATATAAGAGCT 59.010 43.478 25.75 3.96 39.49 4.09
4996 5209 4.449068 GTGTATGTGCGCATATAAGAGCTT 59.551 41.667 25.75 6.26 39.49 3.74
4997 5210 5.050091 GTGTATGTGCGCATATAAGAGCTTT 60.050 40.000 25.75 2.48 39.49 3.51
4998 5211 5.527214 TGTATGTGCGCATATAAGAGCTTTT 59.473 36.000 25.75 1.74 39.49 2.27
4999 5212 4.277257 TGTGCGCATATAAGAGCTTTTG 57.723 40.909 15.91 0.00 35.23 2.44
5000 5213 4.790766 ATGTGCGCATATAAGAGCTTTTGC 60.791 41.667 18.79 0.00 38.58 3.68
5001 5214 7.166794 ATGTGCGCATATAAGAGCTTTTGCA 62.167 40.000 18.79 3.10 39.92 4.08
5002 5215 8.392695 ATGTGCGCATATAAGAGCTTTTGCAT 62.393 38.462 18.79 5.52 39.92 3.96
5010 5223 4.157817 GCTTTTGCATCTGTGGCG 57.842 55.556 0.00 0.00 46.58 5.69
5011 5224 1.286880 GCTTTTGCATCTGTGGCGT 59.713 52.632 0.00 0.00 46.58 5.68
5012 5225 1.005294 GCTTTTGCATCTGTGGCGTG 61.005 55.000 0.00 0.00 46.58 5.34
5013 5226 0.311790 CTTTTGCATCTGTGGCGTGT 59.688 50.000 0.00 0.00 0.00 4.49
5014 5227 0.743688 TTTTGCATCTGTGGCGTGTT 59.256 45.000 0.00 0.00 0.00 3.32
5015 5228 0.743688 TTTGCATCTGTGGCGTGTTT 59.256 45.000 0.00 0.00 0.00 2.83
5016 5229 0.030504 TTGCATCTGTGGCGTGTTTG 59.969 50.000 0.00 0.00 0.00 2.93
5017 5230 0.817229 TGCATCTGTGGCGTGTTTGA 60.817 50.000 0.00 0.00 0.00 2.69
5018 5231 0.310543 GCATCTGTGGCGTGTTTGAA 59.689 50.000 0.00 0.00 0.00 2.69
5019 5232 1.268999 GCATCTGTGGCGTGTTTGAAA 60.269 47.619 0.00 0.00 0.00 2.69
5020 5233 2.797792 GCATCTGTGGCGTGTTTGAAAA 60.798 45.455 0.00 0.00 0.00 2.29
5021 5234 3.443037 CATCTGTGGCGTGTTTGAAAAA 58.557 40.909 0.00 0.00 0.00 1.94
5022 5235 3.143807 TCTGTGGCGTGTTTGAAAAAG 57.856 42.857 0.00 0.00 0.00 2.27
5023 5236 2.750166 TCTGTGGCGTGTTTGAAAAAGA 59.250 40.909 0.00 0.00 0.00 2.52
5024 5237 3.191581 TCTGTGGCGTGTTTGAAAAAGAA 59.808 39.130 0.00 0.00 0.00 2.52
5025 5238 4.111916 CTGTGGCGTGTTTGAAAAAGAAT 58.888 39.130 0.00 0.00 0.00 2.40
5026 5239 5.066634 TCTGTGGCGTGTTTGAAAAAGAATA 59.933 36.000 0.00 0.00 0.00 1.75
5027 5240 5.277825 TGTGGCGTGTTTGAAAAAGAATAG 58.722 37.500 0.00 0.00 0.00 1.73
5028 5241 5.066634 TGTGGCGTGTTTGAAAAAGAATAGA 59.933 36.000 0.00 0.00 0.00 1.98
5029 5242 5.625311 GTGGCGTGTTTGAAAAAGAATAGAG 59.375 40.000 0.00 0.00 0.00 2.43
5030 5243 5.298276 TGGCGTGTTTGAAAAAGAATAGAGT 59.702 36.000 0.00 0.00 0.00 3.24
5031 5244 5.625311 GGCGTGTTTGAAAAAGAATAGAGTG 59.375 40.000 0.00 0.00 0.00 3.51
5032 5245 6.199393 GCGTGTTTGAAAAAGAATAGAGTGT 58.801 36.000 0.00 0.00 0.00 3.55
5033 5246 7.349711 GCGTGTTTGAAAAAGAATAGAGTGTA 58.650 34.615 0.00 0.00 0.00 2.90
5034 5247 7.853929 GCGTGTTTGAAAAAGAATAGAGTGTAA 59.146 33.333 0.00 0.00 0.00 2.41
5035 5248 9.370126 CGTGTTTGAAAAAGAATAGAGTGTAAG 57.630 33.333 0.00 0.00 0.00 2.34
5036 5249 9.665264 GTGTTTGAAAAAGAATAGAGTGTAAGG 57.335 33.333 0.00 0.00 0.00 2.69
5037 5250 9.621629 TGTTTGAAAAAGAATAGAGTGTAAGGA 57.378 29.630 0.00 0.00 0.00 3.36
5038 5251 9.880064 GTTTGAAAAAGAATAGAGTGTAAGGAC 57.120 33.333 0.00 0.00 0.00 3.85
5039 5252 9.621629 TTTGAAAAAGAATAGAGTGTAAGGACA 57.378 29.630 0.00 0.00 0.00 4.02
5040 5253 9.793259 TTGAAAAAGAATAGAGTGTAAGGACAT 57.207 29.630 0.00 0.00 38.04 3.06
5041 5254 9.219603 TGAAAAAGAATAGAGTGTAAGGACATG 57.780 33.333 0.00 0.00 38.04 3.21
5042 5255 9.436957 GAAAAAGAATAGAGTGTAAGGACATGA 57.563 33.333 0.00 0.00 38.04 3.07
5043 5256 9.793259 AAAAAGAATAGAGTGTAAGGACATGAA 57.207 29.630 0.00 0.00 38.04 2.57
5044 5257 8.779354 AAAGAATAGAGTGTAAGGACATGAAC 57.221 34.615 0.00 0.00 38.04 3.18
5045 5258 7.726033 AGAATAGAGTGTAAGGACATGAACT 57.274 36.000 0.00 0.00 38.04 3.01
5046 5259 8.824756 AGAATAGAGTGTAAGGACATGAACTA 57.175 34.615 0.00 0.00 38.04 2.24
5047 5260 9.427821 AGAATAGAGTGTAAGGACATGAACTAT 57.572 33.333 0.00 0.00 38.04 2.12
5048 5261 9.469807 GAATAGAGTGTAAGGACATGAACTATG 57.530 37.037 0.00 0.00 42.68 2.23
5049 5262 6.227298 AGAGTGTAAGGACATGAACTATGG 57.773 41.667 0.00 0.00 41.25 2.74
5050 5263 5.958380 AGAGTGTAAGGACATGAACTATGGA 59.042 40.000 0.00 0.00 41.25 3.41
5051 5264 6.440647 AGAGTGTAAGGACATGAACTATGGAA 59.559 38.462 0.00 0.00 41.25 3.53
5052 5265 6.644347 AGTGTAAGGACATGAACTATGGAAG 58.356 40.000 0.00 0.00 41.25 3.46
5053 5266 5.294552 GTGTAAGGACATGAACTATGGAAGC 59.705 44.000 0.00 0.00 41.25 3.86
5054 5267 4.574674 AAGGACATGAACTATGGAAGCA 57.425 40.909 0.00 0.00 41.25 3.91
5055 5268 4.785346 AGGACATGAACTATGGAAGCAT 57.215 40.909 0.00 0.00 41.25 3.79
5056 5269 4.712476 AGGACATGAACTATGGAAGCATC 58.288 43.478 0.00 0.00 41.25 3.91
5057 5270 4.164796 AGGACATGAACTATGGAAGCATCA 59.835 41.667 0.00 0.00 41.25 3.07
5058 5271 4.274459 GGACATGAACTATGGAAGCATCAC 59.726 45.833 0.00 0.00 41.25 3.06
5059 5272 4.202441 ACATGAACTATGGAAGCATCACC 58.798 43.478 0.00 0.00 41.25 4.02
5060 5273 3.998913 TGAACTATGGAAGCATCACCA 57.001 42.857 0.00 0.00 40.57 4.17
5061 5274 4.508551 TGAACTATGGAAGCATCACCAT 57.491 40.909 0.00 0.00 46.73 3.55
5062 5275 5.628797 TGAACTATGGAAGCATCACCATA 57.371 39.130 0.00 0.00 43.89 2.74
5065 5278 2.965671 ATGGAAGCATCACCATAGGG 57.034 50.000 0.00 0.00 43.89 3.53
5077 5290 1.511613 CCATAGGGTGGTCTCATGGT 58.488 55.000 0.00 0.00 43.44 3.55
5078 5291 1.417890 CCATAGGGTGGTCTCATGGTC 59.582 57.143 0.00 0.00 43.44 4.02
5079 5292 2.402564 CATAGGGTGGTCTCATGGTCT 58.597 52.381 0.00 0.00 0.00 3.85
5080 5293 2.642171 TAGGGTGGTCTCATGGTCTT 57.358 50.000 0.00 0.00 0.00 3.01
5081 5294 1.280457 AGGGTGGTCTCATGGTCTTC 58.720 55.000 0.00 0.00 0.00 2.87
5082 5295 0.984230 GGGTGGTCTCATGGTCTTCA 59.016 55.000 0.00 0.00 0.00 3.02
5083 5296 1.561542 GGGTGGTCTCATGGTCTTCAT 59.438 52.381 0.00 0.00 36.31 2.57
5093 5306 3.614092 CATGGTCTTCATGTAGCCTTGT 58.386 45.455 14.46 2.79 46.11 3.16
5094 5307 4.769688 CATGGTCTTCATGTAGCCTTGTA 58.230 43.478 14.46 0.16 46.11 2.41
5095 5308 5.371526 CATGGTCTTCATGTAGCCTTGTAT 58.628 41.667 14.46 1.82 46.11 2.29
5096 5309 5.023533 TGGTCTTCATGTAGCCTTGTATC 57.976 43.478 11.86 0.00 0.00 2.24
5097 5310 4.716784 TGGTCTTCATGTAGCCTTGTATCT 59.283 41.667 11.86 0.00 0.00 1.98
5098 5311 5.053145 GGTCTTCATGTAGCCTTGTATCTG 58.947 45.833 0.00 0.00 0.00 2.90
5099 5312 5.395768 GGTCTTCATGTAGCCTTGTATCTGT 60.396 44.000 0.00 0.00 0.00 3.41
5100 5313 5.521735 GTCTTCATGTAGCCTTGTATCTGTG 59.478 44.000 0.00 0.00 0.00 3.66
5101 5314 5.422012 TCTTCATGTAGCCTTGTATCTGTGA 59.578 40.000 0.00 0.00 0.00 3.58
5102 5315 5.268118 TCATGTAGCCTTGTATCTGTGAG 57.732 43.478 0.00 0.00 0.00 3.51
5103 5316 3.526931 TGTAGCCTTGTATCTGTGAGC 57.473 47.619 0.00 0.00 0.00 4.26
5104 5317 2.168521 TGTAGCCTTGTATCTGTGAGCC 59.831 50.000 0.00 0.00 0.00 4.70
5105 5318 1.279496 AGCCTTGTATCTGTGAGCCA 58.721 50.000 0.00 0.00 0.00 4.75
5106 5319 1.842562 AGCCTTGTATCTGTGAGCCAT 59.157 47.619 0.00 0.00 0.00 4.40
5107 5320 1.945394 GCCTTGTATCTGTGAGCCATG 59.055 52.381 0.00 0.00 0.00 3.66
5108 5321 2.569059 CCTTGTATCTGTGAGCCATGG 58.431 52.381 7.63 7.63 0.00 3.66
5109 5322 2.092753 CCTTGTATCTGTGAGCCATGGT 60.093 50.000 14.67 0.00 0.00 3.55
5110 5323 3.614092 CTTGTATCTGTGAGCCATGGTT 58.386 45.455 14.67 7.37 0.00 3.67
5111 5324 3.719268 TGTATCTGTGAGCCATGGTTT 57.281 42.857 14.67 1.53 0.00 3.27
5112 5325 4.032960 TGTATCTGTGAGCCATGGTTTT 57.967 40.909 14.67 0.00 0.00 2.43
5113 5326 3.758023 TGTATCTGTGAGCCATGGTTTTG 59.242 43.478 14.67 0.00 0.00 2.44
5114 5327 2.363306 TCTGTGAGCCATGGTTTTGT 57.637 45.000 14.67 0.00 0.00 2.83
5115 5328 3.500448 TCTGTGAGCCATGGTTTTGTA 57.500 42.857 14.67 0.00 0.00 2.41
5116 5329 3.826524 TCTGTGAGCCATGGTTTTGTAA 58.173 40.909 14.67 0.00 0.00 2.41
5117 5330 4.211125 TCTGTGAGCCATGGTTTTGTAAA 58.789 39.130 14.67 0.00 0.00 2.01
5118 5331 4.646945 TCTGTGAGCCATGGTTTTGTAAAA 59.353 37.500 14.67 0.00 0.00 1.52
5119 5332 4.688021 TGTGAGCCATGGTTTTGTAAAAC 58.312 39.130 14.67 10.88 45.70 2.43
5120 5333 4.404073 TGTGAGCCATGGTTTTGTAAAACT 59.596 37.500 14.67 0.00 45.70 2.66
5121 5334 5.594725 TGTGAGCCATGGTTTTGTAAAACTA 59.405 36.000 14.67 12.88 45.70 2.24
5122 5335 6.266558 TGTGAGCCATGGTTTTGTAAAACTAT 59.733 34.615 14.67 14.34 46.63 2.12
5123 5336 6.806739 GTGAGCCATGGTTTTGTAAAACTATC 59.193 38.462 14.67 8.38 44.77 2.08
5124 5337 6.491745 TGAGCCATGGTTTTGTAAAACTATCA 59.508 34.615 14.67 10.34 44.77 2.15
5125 5338 6.687604 AGCCATGGTTTTGTAAAACTATCAC 58.312 36.000 14.67 11.45 44.77 3.06
5126 5339 5.867174 GCCATGGTTTTGTAAAACTATCACC 59.133 40.000 14.67 4.06 44.77 4.02
5127 5340 6.394809 CCATGGTTTTGTAAAACTATCACCC 58.605 40.000 16.94 2.95 44.77 4.61
5128 5341 6.015010 CCATGGTTTTGTAAAACTATCACCCA 60.015 38.462 16.94 7.65 44.77 4.51
5129 5342 7.437748 CATGGTTTTGTAAAACTATCACCCAA 58.562 34.615 16.94 0.00 44.77 4.12
5130 5343 6.807789 TGGTTTTGTAAAACTATCACCCAAC 58.192 36.000 16.94 1.25 45.70 3.77
5131 5344 6.380274 TGGTTTTGTAAAACTATCACCCAACA 59.620 34.615 16.94 3.37 45.70 3.33
5132 5345 6.921307 GGTTTTGTAAAACTATCACCCAACAG 59.079 38.462 16.94 0.00 45.70 3.16
5133 5346 7.201839 GGTTTTGTAAAACTATCACCCAACAGA 60.202 37.037 16.94 0.00 45.70 3.41
5134 5347 7.883391 TTTGTAAAACTATCACCCAACAGAA 57.117 32.000 0.00 0.00 0.00 3.02
5135 5348 7.883391 TTGTAAAACTATCACCCAACAGAAA 57.117 32.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.163663 TGTCTCGAGTCAAATTTTGCAAACT 60.164 36.000 12.39 5.00 0.00 2.66
13 14 7.254590 GCATATTAGCTTTGTCTCGAGTCAAAT 60.255 37.037 29.22 21.01 33.88 2.32
51 52 4.202000 GCCTACCTACTACTTCCTTCGTTC 60.202 50.000 0.00 0.00 0.00 3.95
79 80 5.693769 TCGAGGACCTGGAAATTAAGAAT 57.306 39.130 3.31 0.00 0.00 2.40
213 215 4.965119 ACCGATGTTTATGCTTTCCTTC 57.035 40.909 0.00 0.00 0.00 3.46
333 338 3.992260 TCTCTCGAAGGTGCTTATAGC 57.008 47.619 0.00 0.00 42.82 2.97
361 366 0.033504 GCGTTCAGTGGGAGAAGACA 59.966 55.000 0.00 0.00 0.00 3.41
407 412 8.743085 AATCATAGTGCTCACATTATTTCTGT 57.257 30.769 2.63 0.00 0.00 3.41
415 421 6.891908 AGGGTTTAAATCATAGTGCTCACATT 59.108 34.615 0.00 0.00 0.00 2.71
451 457 4.172807 TGGTTAGGAGGACAGTGGTATTT 58.827 43.478 0.00 0.00 0.00 1.40
581 587 6.619437 CCCTTCCCCCAAAATATAGGATTTTT 59.381 38.462 0.00 0.00 0.00 1.94
752 760 3.738281 CGGGATATCTAATCCACGGATGC 60.738 52.174 2.05 0.00 39.93 3.91
863 873 4.159693 GCAGGGTTTTATAAAGGTTGGAGG 59.840 45.833 0.00 0.00 0.00 4.30
865 875 4.090819 GGCAGGGTTTTATAAAGGTTGGA 58.909 43.478 0.00 0.00 0.00 3.53
904 914 2.094182 GTCGGTGATGGTTAGAGCAAGA 60.094 50.000 0.00 0.00 0.00 3.02
913 923 1.892474 CAAAATGGGTCGGTGATGGTT 59.108 47.619 0.00 0.00 0.00 3.67
923 933 1.401905 CGGAGCTAAGCAAAATGGGTC 59.598 52.381 0.00 0.00 0.00 4.46
1022 1042 4.163839 AGAAGAGGAGAAATGTGAGGATGG 59.836 45.833 0.00 0.00 0.00 3.51
1027 1047 5.874261 GGAAGAAGAAGAGGAGAAATGTGAG 59.126 44.000 0.00 0.00 0.00 3.51
1043 1072 1.118965 TGCGGTGTGGAGGAAGAAGA 61.119 55.000 0.00 0.00 0.00 2.87
1044 1073 0.250295 TTGCGGTGTGGAGGAAGAAG 60.250 55.000 0.00 0.00 0.00 2.85
1045 1074 0.250295 CTTGCGGTGTGGAGGAAGAA 60.250 55.000 0.00 0.00 37.91 2.52
1046 1075 1.371183 CTTGCGGTGTGGAGGAAGA 59.629 57.895 0.00 0.00 37.91 2.87
1047 1076 2.328099 GCTTGCGGTGTGGAGGAAG 61.328 63.158 0.00 0.00 38.57 3.46
1048 1077 2.281484 GCTTGCGGTGTGGAGGAA 60.281 61.111 0.00 0.00 0.00 3.36
1075 1104 1.658686 CGGTCGTCCTCTTCTCCCAG 61.659 65.000 0.00 0.00 0.00 4.45
1107 1136 4.699522 ACGCCGGCCTTGAAGACC 62.700 66.667 23.46 0.00 0.00 3.85
1208 1237 6.534079 ACTTAGTATTAACTTGACGACATGGC 59.466 38.462 0.00 0.00 37.15 4.40
1215 1244 8.738199 TCTGTTCACTTAGTATTAACTTGACG 57.262 34.615 6.17 0.00 37.15 4.35
1239 1268 1.220477 GACCCTGCCAGAGAGCTTC 59.780 63.158 0.00 0.00 0.00 3.86
1240 1269 2.654079 CGACCCTGCCAGAGAGCTT 61.654 63.158 0.00 0.00 0.00 3.74
1281 1310 0.603975 GGTTGAGTGTCCTGAGGTGC 60.604 60.000 0.00 0.00 0.00 5.01
1372 1401 2.679059 CGGAGAGCATGTTCAAGGACAT 60.679 50.000 12.41 0.00 40.76 3.06
1385 1414 1.748329 CGGAATCATCCCGGAGAGCA 61.748 60.000 0.73 0.00 43.37 4.26
1390 1419 2.766229 TGGCGGAATCATCCCGGA 60.766 61.111 0.73 0.00 46.55 5.14
1397 1426 2.496341 CGAGCTCTGGCGGAATCA 59.504 61.111 12.85 0.00 44.37 2.57
1416 1517 2.242882 ACTTTAGGCGGGAGAGGTTA 57.757 50.000 0.00 0.00 0.00 2.85
1444 1545 1.466360 GGCGAGCATGTTCAATGACAC 60.466 52.381 10.36 0.00 31.30 3.67
1449 1550 0.035152 TCCAGGCGAGCATGTTCAAT 60.035 50.000 10.36 0.00 0.00 2.57
1451 1552 0.745486 CATCCAGGCGAGCATGTTCA 60.745 55.000 10.36 0.00 0.00 3.18
1497 1598 2.457366 AATCGAGAAACTTGAGGCGT 57.543 45.000 0.00 0.00 0.00 5.68
1664 1765 0.610785 TCCCTCCAATTGGTTTCCGC 60.611 55.000 23.76 0.00 36.34 5.54
1674 1775 0.687354 CCGGAATCGATCCCTCCAAT 59.313 55.000 13.66 0.00 46.39 3.16
1728 1829 0.872388 GGTTGTTGTCGCCGAGATTT 59.128 50.000 0.00 0.00 0.00 2.17
1815 1916 0.534203 TCTTGCCGCCGAGAAAGTTT 60.534 50.000 0.00 0.00 0.00 2.66
1826 1927 2.595754 GGATGGGGATCTTGCCGC 60.596 66.667 0.00 0.00 40.97 6.53
1831 1932 2.511452 CCGCTCGGATGGGGATCTT 61.511 63.158 1.35 0.00 41.89 2.40
1863 1964 0.900182 ACACGAGGGATGTCAGCTCA 60.900 55.000 0.00 0.00 0.00 4.26
1885 1986 0.881118 CCATGGAGTTTGTTGGACCG 59.119 55.000 5.56 0.00 0.00 4.79
1907 2008 2.284625 ACAGTGAGCGGGGGATGA 60.285 61.111 0.00 0.00 0.00 2.92
1920 2021 2.866762 GAGCTTCGTTGAGTTTGACAGT 59.133 45.455 0.00 0.00 0.00 3.55
1932 2033 1.448540 CAGCCATCGGAGCTTCGTT 60.449 57.895 15.46 2.50 38.95 3.85
1959 2060 1.218316 GCCGGTGAGGAAGTTCGAT 59.782 57.895 1.90 0.00 45.00 3.59
1987 2088 1.431488 CCGCTGAACATGTCATCCCG 61.431 60.000 0.00 0.04 35.07 5.14
1988 2089 1.718757 GCCGCTGAACATGTCATCCC 61.719 60.000 0.00 0.00 35.07 3.85
2013 2114 2.416547 CAGGTGCAAATACTCGAGGTTG 59.583 50.000 18.41 17.49 0.00 3.77
2015 2116 1.623811 ACAGGTGCAAATACTCGAGGT 59.376 47.619 18.41 5.07 0.00 3.85
2072 2173 0.171231 GGCGAAGAATGGTTCAAGGC 59.829 55.000 0.00 0.00 0.00 4.35
2079 2180 0.535335 TAAGCGAGGCGAAGAATGGT 59.465 50.000 0.00 0.00 0.00 3.55
2256 2357 1.569072 AGGTTGAGGGTGTTGAGGTTT 59.431 47.619 0.00 0.00 0.00 3.27
2388 2489 3.405093 GAGCCACGGGATCATGCCA 62.405 63.158 0.00 0.00 38.12 4.92
2410 2511 3.360289 CGGTTTTGCGAAAAATTGACGAC 60.360 43.478 4.22 0.00 31.13 4.34
2451 2552 2.023741 CATTGCACGATGCTCGGC 59.976 61.111 10.54 9.88 45.59 5.54
2466 2567 5.003160 TCAAGATTTTCCATCGTCACACAT 58.997 37.500 0.00 0.00 0.00 3.21
2474 2575 5.363101 TGGAGAGATCAAGATTTTCCATCG 58.637 41.667 0.00 0.00 0.00 3.84
2479 2580 7.206981 TGTTGTTGGAGAGATCAAGATTTTC 57.793 36.000 0.00 0.00 0.00 2.29
2497 2598 2.168106 TCTTGCCTTGCAACATGTTGTT 59.832 40.909 33.01 2.12 43.99 2.83
2532 2633 0.034616 GCAATCCGCTCAGCCTAGAT 59.965 55.000 0.00 0.00 37.77 1.98
2575 2676 2.032634 GGATCGCGCCAGACAACAA 61.033 57.895 0.00 0.00 0.00 2.83
2578 2679 4.812476 CGGGATCGCGCCAGACAA 62.812 66.667 19.68 0.00 0.00 3.18
3026 3156 2.031163 GTGAGTGCCGCCTGTCTT 59.969 61.111 0.00 0.00 0.00 3.01
3038 3168 0.673644 GCATGGTAGCAACGGTGAGT 60.674 55.000 3.55 0.00 0.00 3.41
3046 3176 2.124736 GGGCTCGCATGGTAGCAA 60.125 61.111 0.00 0.00 40.61 3.91
3119 3258 1.738099 CTTGAGTGCTCGAACCCGG 60.738 63.158 0.00 0.00 36.24 5.73
3132 3271 3.267860 GCGCCGATCAGCCTTGAG 61.268 66.667 0.00 0.00 36.61 3.02
3156 3295 2.125991 TCGTAAACGCGCCCGAAT 60.126 55.556 5.73 0.00 39.60 3.34
3168 3307 3.136123 CGGAGCGTCCCCTCGTAA 61.136 66.667 0.00 0.00 31.13 3.18
3264 3403 2.893895 CGCCTCAGCACATCGCAT 60.894 61.111 0.00 0.00 46.13 4.73
3318 3457 3.984193 GAAGTCCGGCTGGCTGCAT 62.984 63.158 18.32 0.00 45.15 3.96
3375 3514 0.036294 GCGGGTAGAGGTGCTTTTCT 60.036 55.000 0.00 0.00 0.00 2.52
3378 3517 2.264794 CGCGGGTAGAGGTGCTTT 59.735 61.111 0.00 0.00 0.00 3.51
3380 3519 3.760035 CACGCGGGTAGAGGTGCT 61.760 66.667 12.47 0.00 0.00 4.40
3381 3520 3.755628 TCACGCGGGTAGAGGTGC 61.756 66.667 8.89 0.00 0.00 5.01
3424 3563 4.120331 GCCAACCAGCCATGCGAC 62.120 66.667 0.00 0.00 0.00 5.19
3477 3616 1.214589 GACGGGTGCGTAGTGATGT 59.785 57.895 0.00 0.00 0.00 3.06
3581 3720 1.687612 CCCATGTCCTTGACCAGCT 59.312 57.895 0.00 0.00 0.00 4.24
3604 3752 1.355210 CAAAGCCTGCGTTGTCGTT 59.645 52.632 9.24 0.00 39.49 3.85
3660 3808 0.391130 GTGCGATGTAGCCCACAGAA 60.391 55.000 0.00 0.00 41.51 3.02
3718 3867 3.062099 CGTCACATGCATTTACGCTACTT 59.938 43.478 11.05 0.00 0.00 2.24
3783 3952 3.498334 CCTCCTAGCCCGTACTCTAAAT 58.502 50.000 0.00 0.00 0.00 1.40
3814 3983 0.386476 TGTACACGTCGCCTTCTGTT 59.614 50.000 0.00 0.00 0.00 3.16
3944 4119 1.087202 TGTGCGATAATGGCGGTGAC 61.087 55.000 0.00 0.00 0.00 3.67
3955 4130 0.108662 CCAGCAGTGACTGTGCGATA 60.109 55.000 14.82 0.00 46.06 2.92
3987 4162 2.412870 CTTGTACCGCAGACAACATCA 58.587 47.619 0.00 0.00 33.35 3.07
3997 4172 1.823260 CGTTGTTCGCTTGTACCGCA 61.823 55.000 5.29 0.00 0.00 5.69
4019 4194 1.198713 AGGTCCATCAGCTCGACAAT 58.801 50.000 0.00 0.00 0.00 2.71
4021 4196 0.247460 CAAGGTCCATCAGCTCGACA 59.753 55.000 0.00 0.00 30.18 4.35
4132 4307 6.071784 TGAGTACGTAACCACAAGTATGTCAT 60.072 38.462 0.00 0.00 37.82 3.06
4137 4312 6.519679 TCATGAGTACGTAACCACAAGTAT 57.480 37.500 0.00 0.00 0.00 2.12
4169 4344 3.057876 CCTCGATGCTATGAGTCTACCAC 60.058 52.174 0.00 0.00 0.00 4.16
4171 4346 3.150767 ACCTCGATGCTATGAGTCTACC 58.849 50.000 0.00 0.00 0.00 3.18
4176 4351 6.650427 TTGTATAACCTCGATGCTATGAGT 57.350 37.500 0.00 0.00 0.00 3.41
4177 4352 9.639601 TTTATTGTATAACCTCGATGCTATGAG 57.360 33.333 0.00 0.00 0.00 2.90
4178 4353 9.419297 GTTTATTGTATAACCTCGATGCTATGA 57.581 33.333 0.00 0.00 0.00 2.15
4179 4354 9.424319 AGTTTATTGTATAACCTCGATGCTATG 57.576 33.333 0.00 0.00 0.00 2.23
4180 4355 9.998106 AAGTTTATTGTATAACCTCGATGCTAT 57.002 29.630 0.00 0.00 0.00 2.97
4181 4356 9.256477 CAAGTTTATTGTATAACCTCGATGCTA 57.744 33.333 0.00 0.00 0.00 3.49
4182 4357 7.769044 ACAAGTTTATTGTATAACCTCGATGCT 59.231 33.333 0.00 0.00 0.00 3.79
4183 4358 7.850982 CACAAGTTTATTGTATAACCTCGATGC 59.149 37.037 0.00 0.00 0.00 3.91
4188 4363 7.385778 TGCCACAAGTTTATTGTATAACCTC 57.614 36.000 0.00 0.00 0.00 3.85
4197 4372 2.168313 GGGGGATGCCACAAGTTTATTG 59.832 50.000 5.30 0.00 0.00 1.90
4248 4426 1.971695 GGCACCCCCGAGTTTTCTG 60.972 63.158 0.00 0.00 0.00 3.02
4249 4427 2.434774 GGCACCCCCGAGTTTTCT 59.565 61.111 0.00 0.00 0.00 2.52
4273 4451 6.825721 CCTTCTTATTACTTGCACATCTCCTT 59.174 38.462 0.00 0.00 0.00 3.36
4291 4470 0.036732 CCACACCTGCTGCCTTCTTA 59.963 55.000 0.00 0.00 0.00 2.10
4311 4490 3.906846 TGTTTTTAACCCGTACTCCCCTA 59.093 43.478 0.00 0.00 0.00 3.53
4313 4492 3.138884 TGTTTTTAACCCGTACTCCCC 57.861 47.619 0.00 0.00 0.00 4.81
4333 4512 9.354673 CCATATTACCATCAACTTACAAGGATT 57.645 33.333 0.00 0.00 0.00 3.01
4349 4528 9.860650 AAAAGCATACTCAATACCATATTACCA 57.139 29.630 0.00 0.00 0.00 3.25
4385 4564 6.652062 CCCGGTGTAACAGTTTAACTCTTTAT 59.348 38.462 0.00 0.00 39.98 1.40
4386 4565 5.990996 CCCGGTGTAACAGTTTAACTCTTTA 59.009 40.000 0.00 0.00 39.98 1.85
4387 4566 4.818005 CCCGGTGTAACAGTTTAACTCTTT 59.182 41.667 0.00 0.00 39.98 2.52
4388 4567 4.383173 CCCGGTGTAACAGTTTAACTCTT 58.617 43.478 0.00 0.00 39.98 2.85
4389 4568 3.244318 CCCCGGTGTAACAGTTTAACTCT 60.244 47.826 0.00 0.00 39.98 3.24
4390 4569 3.069289 CCCCGGTGTAACAGTTTAACTC 58.931 50.000 0.00 0.00 39.98 3.01
4405 4584 1.305213 AATTGCATCAAGCCCCGGT 60.305 52.632 0.00 0.00 44.83 5.28
4438 4651 0.253610 TGACTGAAAACACCACCGGT 59.746 50.000 0.00 0.00 35.62 5.28
4453 4666 1.335182 CAGCACCGTAGATCGATGACT 59.665 52.381 0.54 0.00 42.86 3.41
4823 5036 3.873910 ACATGCAGGGTTCACTATACAC 58.126 45.455 2.31 0.00 0.00 2.90
4824 5037 4.260985 CAACATGCAGGGTTCACTATACA 58.739 43.478 2.31 0.00 0.00 2.29
4825 5038 3.627577 CCAACATGCAGGGTTCACTATAC 59.372 47.826 2.31 0.00 0.00 1.47
4826 5039 3.265737 ACCAACATGCAGGGTTCACTATA 59.734 43.478 2.31 0.00 0.00 1.31
4827 5040 2.041620 ACCAACATGCAGGGTTCACTAT 59.958 45.455 2.31 0.00 0.00 2.12
4828 5041 1.423541 ACCAACATGCAGGGTTCACTA 59.576 47.619 2.31 0.00 0.00 2.74
4829 5042 0.185901 ACCAACATGCAGGGTTCACT 59.814 50.000 2.31 0.00 0.00 3.41
4830 5043 1.904287 TACCAACATGCAGGGTTCAC 58.096 50.000 2.31 0.00 36.14 3.18
4831 5044 2.897271 ATACCAACATGCAGGGTTCA 57.103 45.000 2.31 0.00 36.14 3.18
4832 5045 3.627577 CACTATACCAACATGCAGGGTTC 59.372 47.826 2.31 0.00 36.14 3.62
4833 5046 3.265737 TCACTATACCAACATGCAGGGTT 59.734 43.478 2.31 1.54 36.14 4.11
4834 5047 2.843730 TCACTATACCAACATGCAGGGT 59.156 45.455 2.31 5.34 38.70 4.34
4835 5048 3.558931 TCACTATACCAACATGCAGGG 57.441 47.619 2.31 0.00 0.00 4.45
4836 5049 3.879295 CCTTCACTATACCAACATGCAGG 59.121 47.826 0.00 0.00 0.00 4.85
4837 5050 3.313526 GCCTTCACTATACCAACATGCAG 59.686 47.826 0.00 0.00 0.00 4.41
4838 5051 3.278574 GCCTTCACTATACCAACATGCA 58.721 45.455 0.00 0.00 0.00 3.96
4839 5052 3.065371 GTGCCTTCACTATACCAACATGC 59.935 47.826 0.00 0.00 40.03 4.06
4840 5053 4.260985 TGTGCCTTCACTATACCAACATG 58.739 43.478 0.00 0.00 43.49 3.21
4841 5054 4.568072 TGTGCCTTCACTATACCAACAT 57.432 40.909 0.00 0.00 43.49 2.71
4842 5055 4.260985 CATGTGCCTTCACTATACCAACA 58.739 43.478 0.00 0.00 43.49 3.33
4843 5056 4.261801 ACATGTGCCTTCACTATACCAAC 58.738 43.478 0.00 0.00 43.49 3.77
4844 5057 4.568072 ACATGTGCCTTCACTATACCAA 57.432 40.909 0.00 0.00 43.49 3.67
4845 5058 4.019771 TCAACATGTGCCTTCACTATACCA 60.020 41.667 0.00 0.00 43.49 3.25
4846 5059 4.513442 TCAACATGTGCCTTCACTATACC 58.487 43.478 0.00 0.00 43.49 2.73
4847 5060 5.874810 TCTTCAACATGTGCCTTCACTATAC 59.125 40.000 0.00 0.00 43.49 1.47
4848 5061 5.874810 GTCTTCAACATGTGCCTTCACTATA 59.125 40.000 0.00 0.00 43.49 1.31
4849 5062 4.697352 GTCTTCAACATGTGCCTTCACTAT 59.303 41.667 0.00 0.00 43.49 2.12
4850 5063 4.065088 GTCTTCAACATGTGCCTTCACTA 58.935 43.478 0.00 0.00 43.49 2.74
4851 5064 2.880890 GTCTTCAACATGTGCCTTCACT 59.119 45.455 0.00 0.00 43.49 3.41
4852 5065 2.880890 AGTCTTCAACATGTGCCTTCAC 59.119 45.455 0.00 0.00 43.40 3.18
4853 5066 2.880268 CAGTCTTCAACATGTGCCTTCA 59.120 45.455 0.00 0.00 0.00 3.02
4854 5067 2.351157 GCAGTCTTCAACATGTGCCTTC 60.351 50.000 0.00 0.00 0.00 3.46
4855 5068 1.610522 GCAGTCTTCAACATGTGCCTT 59.389 47.619 0.00 0.00 0.00 4.35
4856 5069 1.242076 GCAGTCTTCAACATGTGCCT 58.758 50.000 0.00 0.00 0.00 4.75
4857 5070 0.953727 TGCAGTCTTCAACATGTGCC 59.046 50.000 0.00 0.00 0.00 5.01
4858 5071 2.780065 TTGCAGTCTTCAACATGTGC 57.220 45.000 0.00 0.00 0.00 4.57
4859 5072 6.245115 TCTATTTGCAGTCTTCAACATGTG 57.755 37.500 0.00 0.00 0.00 3.21
4860 5073 6.488006 ACTTCTATTTGCAGTCTTCAACATGT 59.512 34.615 0.00 0.00 0.00 3.21
4861 5074 6.906659 ACTTCTATTTGCAGTCTTCAACATG 58.093 36.000 0.00 0.00 0.00 3.21
4862 5075 7.013655 ACAACTTCTATTTGCAGTCTTCAACAT 59.986 33.333 0.00 0.00 0.00 2.71
4863 5076 6.318648 ACAACTTCTATTTGCAGTCTTCAACA 59.681 34.615 0.00 0.00 0.00 3.33
4864 5077 6.729187 ACAACTTCTATTTGCAGTCTTCAAC 58.271 36.000 0.00 0.00 0.00 3.18
4865 5078 6.542005 TGACAACTTCTATTTGCAGTCTTCAA 59.458 34.615 0.00 0.00 0.00 2.69
4866 5079 6.017934 GTGACAACTTCTATTTGCAGTCTTCA 60.018 38.462 0.00 0.00 0.00 3.02
4867 5080 6.366630 GTGACAACTTCTATTTGCAGTCTTC 58.633 40.000 0.00 0.00 0.00 2.87
4868 5081 5.050091 CGTGACAACTTCTATTTGCAGTCTT 60.050 40.000 0.00 0.00 0.00 3.01
4869 5082 4.449068 CGTGACAACTTCTATTTGCAGTCT 59.551 41.667 0.00 0.00 0.00 3.24
4870 5083 4.447724 TCGTGACAACTTCTATTTGCAGTC 59.552 41.667 0.00 0.00 0.00 3.51
4871 5084 4.377021 TCGTGACAACTTCTATTTGCAGT 58.623 39.130 0.00 0.00 0.00 4.40
4872 5085 4.990543 TCGTGACAACTTCTATTTGCAG 57.009 40.909 0.00 0.00 0.00 4.41
4873 5086 5.350365 GGTATCGTGACAACTTCTATTTGCA 59.650 40.000 0.00 0.00 0.00 4.08
4874 5087 5.350365 TGGTATCGTGACAACTTCTATTTGC 59.650 40.000 0.00 0.00 0.00 3.68
4875 5088 6.367695 TGTGGTATCGTGACAACTTCTATTTG 59.632 38.462 0.00 0.00 0.00 2.32
4876 5089 6.460781 TGTGGTATCGTGACAACTTCTATTT 58.539 36.000 0.00 0.00 0.00 1.40
4877 5090 6.032956 TGTGGTATCGTGACAACTTCTATT 57.967 37.500 0.00 0.00 0.00 1.73
4878 5091 5.654603 TGTGGTATCGTGACAACTTCTAT 57.345 39.130 0.00 0.00 0.00 1.98
4879 5092 5.456548 TTGTGGTATCGTGACAACTTCTA 57.543 39.130 0.00 0.00 0.00 2.10
4880 5093 4.330944 TTGTGGTATCGTGACAACTTCT 57.669 40.909 0.00 0.00 0.00 2.85
4881 5094 5.412526 TTTTGTGGTATCGTGACAACTTC 57.587 39.130 0.00 0.00 29.44 3.01
4882 5095 5.587043 TCTTTTTGTGGTATCGTGACAACTT 59.413 36.000 0.00 0.00 29.44 2.66
4883 5096 5.120399 TCTTTTTGTGGTATCGTGACAACT 58.880 37.500 0.00 0.00 29.44 3.16
4884 5097 5.007332 ACTCTTTTTGTGGTATCGTGACAAC 59.993 40.000 0.00 0.00 29.44 3.32
4885 5098 5.007234 CACTCTTTTTGTGGTATCGTGACAA 59.993 40.000 0.00 0.00 0.00 3.18
4886 5099 4.509970 CACTCTTTTTGTGGTATCGTGACA 59.490 41.667 0.00 0.00 0.00 3.58
4887 5100 4.748102 TCACTCTTTTTGTGGTATCGTGAC 59.252 41.667 0.00 0.00 36.21 3.67
4888 5101 4.951254 TCACTCTTTTTGTGGTATCGTGA 58.049 39.130 0.00 0.00 36.21 4.35
4889 5102 5.390885 CCATCACTCTTTTTGTGGTATCGTG 60.391 44.000 0.00 0.00 36.21 4.35
4890 5103 4.695455 CCATCACTCTTTTTGTGGTATCGT 59.305 41.667 0.00 0.00 36.21 3.73
4891 5104 4.695455 ACCATCACTCTTTTTGTGGTATCG 59.305 41.667 0.00 0.00 38.13 2.92
4892 5105 5.106157 CCACCATCACTCTTTTTGTGGTATC 60.106 44.000 0.00 0.00 37.84 2.24
4893 5106 4.766891 CCACCATCACTCTTTTTGTGGTAT 59.233 41.667 0.00 0.00 37.84 2.73
4894 5107 4.141287 CCACCATCACTCTTTTTGTGGTA 58.859 43.478 0.00 0.00 37.84 3.25
4895 5108 2.958355 CCACCATCACTCTTTTTGTGGT 59.042 45.455 0.00 0.00 40.38 4.16
4896 5109 2.288395 GCCACCATCACTCTTTTTGTGG 60.288 50.000 0.00 0.00 43.55 4.17
4897 5110 2.288395 GGCCACCATCACTCTTTTTGTG 60.288 50.000 0.00 0.00 36.82 3.33
4898 5111 1.963515 GGCCACCATCACTCTTTTTGT 59.036 47.619 0.00 0.00 0.00 2.83
4899 5112 1.273327 GGGCCACCATCACTCTTTTTG 59.727 52.381 4.39 0.00 36.50 2.44
4900 5113 1.133199 TGGGCCACCATCACTCTTTTT 60.133 47.619 0.00 0.00 43.37 1.94
4901 5114 0.482446 TGGGCCACCATCACTCTTTT 59.518 50.000 0.00 0.00 43.37 2.27
4902 5115 2.163454 TGGGCCACCATCACTCTTT 58.837 52.632 0.00 0.00 43.37 2.52
4903 5116 3.920817 TGGGCCACCATCACTCTT 58.079 55.556 0.00 0.00 43.37 2.85
4911 5124 1.059584 TTTGAGAGACTGGGCCACCA 61.060 55.000 0.00 0.00 46.94 4.17
4912 5125 0.322008 CTTTGAGAGACTGGGCCACC 60.322 60.000 0.00 0.00 37.24 4.61
4913 5126 0.322008 CCTTTGAGAGACTGGGCCAC 60.322 60.000 0.00 0.00 0.00 5.01
4914 5127 0.768221 ACCTTTGAGAGACTGGGCCA 60.768 55.000 5.85 5.85 0.00 5.36
4915 5128 1.066071 GTACCTTTGAGAGACTGGGCC 60.066 57.143 0.00 0.00 0.00 5.80
4916 5129 1.903183 AGTACCTTTGAGAGACTGGGC 59.097 52.381 0.00 0.00 0.00 5.36
4917 5130 2.164624 CGAGTACCTTTGAGAGACTGGG 59.835 54.545 0.00 0.00 0.00 4.45
4918 5131 2.820787 ACGAGTACCTTTGAGAGACTGG 59.179 50.000 0.00 0.00 0.00 4.00
4919 5132 5.354513 TCATACGAGTACCTTTGAGAGACTG 59.645 44.000 0.00 0.00 0.00 3.51
4920 5133 5.498393 TCATACGAGTACCTTTGAGAGACT 58.502 41.667 0.00 0.00 0.00 3.24
4921 5134 5.814764 TCATACGAGTACCTTTGAGAGAC 57.185 43.478 0.00 0.00 0.00 3.36
4922 5135 7.555195 TGTATTCATACGAGTACCTTTGAGAGA 59.445 37.037 0.00 0.00 34.34 3.10
4923 5136 7.704271 TGTATTCATACGAGTACCTTTGAGAG 58.296 38.462 0.00 0.00 34.34 3.20
4924 5137 7.634671 TGTATTCATACGAGTACCTTTGAGA 57.365 36.000 0.00 0.00 34.34 3.27
4925 5138 8.755941 CATTGTATTCATACGAGTACCTTTGAG 58.244 37.037 0.00 0.00 34.34 3.02
4926 5139 8.255206 ACATTGTATTCATACGAGTACCTTTGA 58.745 33.333 0.00 0.00 34.34 2.69
4927 5140 8.328146 CACATTGTATTCATACGAGTACCTTTG 58.672 37.037 0.00 0.00 34.34 2.77
4928 5141 7.011109 GCACATTGTATTCATACGAGTACCTTT 59.989 37.037 0.00 0.00 34.34 3.11
4929 5142 6.479001 GCACATTGTATTCATACGAGTACCTT 59.521 38.462 0.00 0.00 34.34 3.50
4930 5143 5.983720 GCACATTGTATTCATACGAGTACCT 59.016 40.000 0.00 0.00 34.34 3.08
4931 5144 5.176958 GGCACATTGTATTCATACGAGTACC 59.823 44.000 0.00 0.00 34.34 3.34
4932 5145 5.983720 AGGCACATTGTATTCATACGAGTAC 59.016 40.000 0.00 0.00 35.48 2.73
4933 5146 6.156748 AGGCACATTGTATTCATACGAGTA 57.843 37.500 0.00 0.00 36.06 2.59
4934 5147 5.023533 AGGCACATTGTATTCATACGAGT 57.976 39.130 0.00 0.00 36.06 4.18
4935 5148 4.449068 GGAGGCACATTGTATTCATACGAG 59.551 45.833 0.00 0.00 36.06 4.18
4936 5149 4.141824 TGGAGGCACATTGTATTCATACGA 60.142 41.667 0.00 0.00 36.06 3.43
4937 5150 4.126437 TGGAGGCACATTGTATTCATACG 58.874 43.478 0.00 0.00 36.06 3.06
4938 5151 6.262944 TGAATGGAGGCACATTGTATTCATAC 59.737 38.462 11.41 0.00 40.92 2.39
4939 5152 6.363882 TGAATGGAGGCACATTGTATTCATA 58.636 36.000 11.41 0.00 40.92 2.15
4940 5153 5.202765 TGAATGGAGGCACATTGTATTCAT 58.797 37.500 11.41 0.00 40.92 2.57
4941 5154 4.598022 TGAATGGAGGCACATTGTATTCA 58.402 39.130 11.41 6.39 40.92 2.57
4942 5155 5.526115 CATGAATGGAGGCACATTGTATTC 58.474 41.667 11.41 0.00 40.92 1.75
4943 5156 4.202182 GCATGAATGGAGGCACATTGTATT 60.202 41.667 11.41 0.00 40.92 1.89
4944 5157 3.319972 GCATGAATGGAGGCACATTGTAT 59.680 43.478 11.41 4.51 40.92 2.29
4945 5158 2.689471 GCATGAATGGAGGCACATTGTA 59.311 45.455 11.41 2.64 40.92 2.41
4946 5159 1.479323 GCATGAATGGAGGCACATTGT 59.521 47.619 11.41 0.00 40.92 2.71
4947 5160 1.535226 CGCATGAATGGAGGCACATTG 60.535 52.381 11.41 1.23 40.92 2.82
4948 5161 0.742505 CGCATGAATGGAGGCACATT 59.257 50.000 0.00 7.08 43.36 2.71
4949 5162 1.105167 CCGCATGAATGGAGGCACAT 61.105 55.000 0.00 0.00 0.00 3.21
4950 5163 1.750018 CCGCATGAATGGAGGCACA 60.750 57.895 0.00 0.00 0.00 4.57
4951 5164 0.820891 ATCCGCATGAATGGAGGCAC 60.821 55.000 0.00 0.00 37.76 5.01
4952 5165 0.820482 CATCCGCATGAATGGAGGCA 60.820 55.000 0.00 0.00 37.76 4.75
4953 5166 0.535780 TCATCCGCATGAATGGAGGC 60.536 55.000 0.00 0.00 35.99 4.70
4954 5167 1.202734 ACTCATCCGCATGAATGGAGG 60.203 52.381 0.00 1.85 38.63 4.30
4955 5168 1.871676 CACTCATCCGCATGAATGGAG 59.128 52.381 0.00 0.00 38.63 3.86
4956 5169 1.210234 ACACTCATCCGCATGAATGGA 59.790 47.619 2.47 0.00 40.04 3.41
4957 5170 1.671979 ACACTCATCCGCATGAATGG 58.328 50.000 2.47 0.00 40.04 3.16
4958 5171 3.811497 ACATACACTCATCCGCATGAATG 59.189 43.478 0.00 0.00 41.26 2.67
4959 5172 3.811497 CACATACACTCATCCGCATGAAT 59.189 43.478 0.00 0.00 38.63 2.57
4960 5173 3.197265 CACATACACTCATCCGCATGAA 58.803 45.455 0.00 0.00 38.63 2.57
4961 5174 2.825205 CACATACACTCATCCGCATGA 58.175 47.619 0.00 0.00 36.62 3.07
4962 5175 1.262417 GCACATACACTCATCCGCATG 59.738 52.381 0.00 0.00 0.00 4.06
4963 5176 1.586422 GCACATACACTCATCCGCAT 58.414 50.000 0.00 0.00 0.00 4.73
4964 5177 0.805711 CGCACATACACTCATCCGCA 60.806 55.000 0.00 0.00 0.00 5.69
4965 5178 1.927210 CGCACATACACTCATCCGC 59.073 57.895 0.00 0.00 0.00 5.54
4966 5179 0.805711 TGCGCACATACACTCATCCG 60.806 55.000 5.66 0.00 0.00 4.18
4967 5180 1.586422 ATGCGCACATACACTCATCC 58.414 50.000 14.90 0.00 33.67 3.51
4968 5181 5.863935 TCTTATATGCGCACATACACTCATC 59.136 40.000 14.90 0.00 41.50 2.92
4969 5182 5.783111 TCTTATATGCGCACATACACTCAT 58.217 37.500 14.90 0.00 41.50 2.90
4970 5183 5.195001 TCTTATATGCGCACATACACTCA 57.805 39.130 14.90 0.00 41.50 3.41
4971 5184 4.090642 GCTCTTATATGCGCACATACACTC 59.909 45.833 14.90 0.00 41.50 3.51
4972 5185 3.990469 GCTCTTATATGCGCACATACACT 59.010 43.478 14.90 0.00 41.50 3.55
4973 5186 3.990469 AGCTCTTATATGCGCACATACAC 59.010 43.478 14.90 0.00 41.50 2.90
4974 5187 4.257267 AGCTCTTATATGCGCACATACA 57.743 40.909 14.90 0.00 41.50 2.29
4975 5188 5.597813 AAAGCTCTTATATGCGCACATAC 57.402 39.130 14.90 0.00 41.50 2.39
4976 5189 5.560760 GCAAAAGCTCTTATATGCGCACATA 60.561 40.000 14.90 8.81 42.85 2.29
4977 5190 4.790766 GCAAAAGCTCTTATATGCGCACAT 60.791 41.667 14.90 10.25 40.49 3.21
4978 5191 3.487376 GCAAAAGCTCTTATATGCGCACA 60.487 43.478 14.90 0.00 0.00 4.57
4979 5192 3.038710 GCAAAAGCTCTTATATGCGCAC 58.961 45.455 14.90 0.00 0.00 5.34
4980 5193 2.682352 TGCAAAAGCTCTTATATGCGCA 59.318 40.909 14.96 14.96 36.62 6.09
4981 5194 3.338818 TGCAAAAGCTCTTATATGCGC 57.661 42.857 0.00 0.00 36.62 6.09
4982 5195 5.145059 CAGATGCAAAAGCTCTTATATGCG 58.855 41.667 0.00 0.00 36.62 4.73
4983 5196 5.913514 CACAGATGCAAAAGCTCTTATATGC 59.086 40.000 0.00 7.56 0.00 3.14
4984 5197 6.436261 CCACAGATGCAAAAGCTCTTATATG 58.564 40.000 0.00 0.00 0.00 1.78
4985 5198 5.009410 GCCACAGATGCAAAAGCTCTTATAT 59.991 40.000 0.00 0.00 0.00 0.86
4986 5199 4.336433 GCCACAGATGCAAAAGCTCTTATA 59.664 41.667 0.00 0.00 0.00 0.98
4987 5200 3.129988 GCCACAGATGCAAAAGCTCTTAT 59.870 43.478 0.00 0.00 0.00 1.73
4988 5201 2.489329 GCCACAGATGCAAAAGCTCTTA 59.511 45.455 0.00 0.00 0.00 2.10
4989 5202 1.271656 GCCACAGATGCAAAAGCTCTT 59.728 47.619 0.00 0.00 0.00 2.85
4990 5203 0.886563 GCCACAGATGCAAAAGCTCT 59.113 50.000 0.00 0.00 0.00 4.09
4991 5204 0.455633 CGCCACAGATGCAAAAGCTC 60.456 55.000 0.00 0.00 0.00 4.09
4992 5205 1.174712 ACGCCACAGATGCAAAAGCT 61.175 50.000 0.00 0.00 0.00 3.74
4993 5206 1.005294 CACGCCACAGATGCAAAAGC 61.005 55.000 0.00 0.00 0.00 3.51
4994 5207 0.311790 ACACGCCACAGATGCAAAAG 59.688 50.000 0.00 0.00 0.00 2.27
4995 5208 0.743688 AACACGCCACAGATGCAAAA 59.256 45.000 0.00 0.00 0.00 2.44
4996 5209 0.743688 AAACACGCCACAGATGCAAA 59.256 45.000 0.00 0.00 0.00 3.68
4997 5210 0.030504 CAAACACGCCACAGATGCAA 59.969 50.000 0.00 0.00 0.00 4.08
4998 5211 0.817229 TCAAACACGCCACAGATGCA 60.817 50.000 0.00 0.00 0.00 3.96
4999 5212 0.310543 TTCAAACACGCCACAGATGC 59.689 50.000 0.00 0.00 0.00 3.91
5000 5213 2.772568 TTTCAAACACGCCACAGATG 57.227 45.000 0.00 0.00 0.00 2.90
5001 5214 3.380004 TCTTTTTCAAACACGCCACAGAT 59.620 39.130 0.00 0.00 0.00 2.90
5002 5215 2.750166 TCTTTTTCAAACACGCCACAGA 59.250 40.909 0.00 0.00 0.00 3.41
5003 5216 3.143807 TCTTTTTCAAACACGCCACAG 57.856 42.857 0.00 0.00 0.00 3.66
5004 5217 3.577649 TTCTTTTTCAAACACGCCACA 57.422 38.095 0.00 0.00 0.00 4.17
5005 5218 5.516090 TCTATTCTTTTTCAAACACGCCAC 58.484 37.500 0.00 0.00 0.00 5.01
5006 5219 5.298276 ACTCTATTCTTTTTCAAACACGCCA 59.702 36.000 0.00 0.00 0.00 5.69
5007 5220 5.625311 CACTCTATTCTTTTTCAAACACGCC 59.375 40.000 0.00 0.00 0.00 5.68
5008 5221 6.199393 ACACTCTATTCTTTTTCAAACACGC 58.801 36.000 0.00 0.00 0.00 5.34
5009 5222 9.370126 CTTACACTCTATTCTTTTTCAAACACG 57.630 33.333 0.00 0.00 0.00 4.49
5010 5223 9.665264 CCTTACACTCTATTCTTTTTCAAACAC 57.335 33.333 0.00 0.00 0.00 3.32
5011 5224 9.621629 TCCTTACACTCTATTCTTTTTCAAACA 57.378 29.630 0.00 0.00 0.00 2.83
5012 5225 9.880064 GTCCTTACACTCTATTCTTTTTCAAAC 57.120 33.333 0.00 0.00 0.00 2.93
5013 5226 9.621629 TGTCCTTACACTCTATTCTTTTTCAAA 57.378 29.630 0.00 0.00 0.00 2.69
5014 5227 9.793259 ATGTCCTTACACTCTATTCTTTTTCAA 57.207 29.630 0.00 0.00 38.78 2.69
5015 5228 9.219603 CATGTCCTTACACTCTATTCTTTTTCA 57.780 33.333 0.00 0.00 38.78 2.69
5016 5229 9.436957 TCATGTCCTTACACTCTATTCTTTTTC 57.563 33.333 0.00 0.00 38.78 2.29
5017 5230 9.793259 TTCATGTCCTTACACTCTATTCTTTTT 57.207 29.630 0.00 0.00 38.78 1.94
5018 5231 9.220767 GTTCATGTCCTTACACTCTATTCTTTT 57.779 33.333 0.00 0.00 38.78 2.27
5019 5232 8.598041 AGTTCATGTCCTTACACTCTATTCTTT 58.402 33.333 0.00 0.00 38.78 2.52
5020 5233 8.140112 AGTTCATGTCCTTACACTCTATTCTT 57.860 34.615 0.00 0.00 38.78 2.52
5021 5234 7.726033 AGTTCATGTCCTTACACTCTATTCT 57.274 36.000 0.00 0.00 38.78 2.40
5022 5235 9.469807 CATAGTTCATGTCCTTACACTCTATTC 57.530 37.037 0.00 0.00 38.78 1.75
5023 5236 8.424918 CCATAGTTCATGTCCTTACACTCTATT 58.575 37.037 0.00 0.00 38.78 1.73
5024 5237 7.785028 TCCATAGTTCATGTCCTTACACTCTAT 59.215 37.037 0.00 0.00 38.78 1.98
5025 5238 7.123383 TCCATAGTTCATGTCCTTACACTCTA 58.877 38.462 0.00 0.00 38.78 2.43
5026 5239 5.958380 TCCATAGTTCATGTCCTTACACTCT 59.042 40.000 0.00 0.00 38.78 3.24
5027 5240 6.222038 TCCATAGTTCATGTCCTTACACTC 57.778 41.667 0.00 0.00 38.78 3.51
5028 5241 6.620877 TTCCATAGTTCATGTCCTTACACT 57.379 37.500 0.00 0.00 38.78 3.55
5029 5242 5.294552 GCTTCCATAGTTCATGTCCTTACAC 59.705 44.000 0.00 0.00 38.78 2.90
5030 5243 5.045942 TGCTTCCATAGTTCATGTCCTTACA 60.046 40.000 0.00 0.00 40.69 2.41
5031 5244 5.428253 TGCTTCCATAGTTCATGTCCTTAC 58.572 41.667 0.00 0.00 32.21 2.34
5032 5245 5.692115 TGCTTCCATAGTTCATGTCCTTA 57.308 39.130 0.00 0.00 32.21 2.69
5033 5246 4.574674 TGCTTCCATAGTTCATGTCCTT 57.425 40.909 0.00 0.00 32.21 3.36
5034 5247 4.164796 TGATGCTTCCATAGTTCATGTCCT 59.835 41.667 0.00 0.00 32.21 3.85
5035 5248 4.274459 GTGATGCTTCCATAGTTCATGTCC 59.726 45.833 0.00 0.00 32.21 4.02
5036 5249 4.274459 GGTGATGCTTCCATAGTTCATGTC 59.726 45.833 0.00 0.00 32.21 3.06
5037 5250 4.202441 GGTGATGCTTCCATAGTTCATGT 58.798 43.478 0.00 0.00 32.21 3.21
5038 5251 4.201657 TGGTGATGCTTCCATAGTTCATG 58.798 43.478 0.00 0.00 0.00 3.07
5039 5252 4.508551 TGGTGATGCTTCCATAGTTCAT 57.491 40.909 0.00 0.00 0.00 2.57
5040 5253 3.998913 TGGTGATGCTTCCATAGTTCA 57.001 42.857 0.00 0.00 0.00 3.18
5045 5258 3.326521 ACCCTATGGTGATGCTTCCATA 58.673 45.455 0.00 0.00 45.58 2.74
5046 5259 2.138542 ACCCTATGGTGATGCTTCCAT 58.861 47.619 0.00 0.00 45.58 3.41
5047 5260 1.595311 ACCCTATGGTGATGCTTCCA 58.405 50.000 0.00 0.00 45.58 3.53
5059 5272 2.402564 AGACCATGAGACCACCCTATG 58.597 52.381 0.00 0.00 0.00 2.23
5060 5273 2.877154 AGACCATGAGACCACCCTAT 57.123 50.000 0.00 0.00 0.00 2.57
5061 5274 2.225522 TGAAGACCATGAGACCACCCTA 60.226 50.000 0.00 0.00 0.00 3.53
5062 5275 1.280457 GAAGACCATGAGACCACCCT 58.720 55.000 0.00 0.00 0.00 4.34
5063 5276 0.984230 TGAAGACCATGAGACCACCC 59.016 55.000 0.00 0.00 0.00 4.61
5073 5286 5.367937 AGATACAAGGCTACATGAAGACCAT 59.632 40.000 0.00 0.00 35.44 3.55
5074 5287 4.716784 AGATACAAGGCTACATGAAGACCA 59.283 41.667 0.00 0.00 0.00 4.02
5075 5288 5.053145 CAGATACAAGGCTACATGAAGACC 58.947 45.833 0.00 0.00 0.00 3.85
5076 5289 5.521735 CACAGATACAAGGCTACATGAAGAC 59.478 44.000 0.00 0.00 0.00 3.01
5077 5290 5.422012 TCACAGATACAAGGCTACATGAAGA 59.578 40.000 0.00 0.00 0.00 2.87
5078 5291 5.664457 TCACAGATACAAGGCTACATGAAG 58.336 41.667 0.00 0.00 0.00 3.02
5079 5292 5.664457 CTCACAGATACAAGGCTACATGAA 58.336 41.667 0.00 0.00 0.00 2.57
5080 5293 4.442052 GCTCACAGATACAAGGCTACATGA 60.442 45.833 0.00 0.00 0.00 3.07
5081 5294 3.806521 GCTCACAGATACAAGGCTACATG 59.193 47.826 0.00 0.00 0.00 3.21
5082 5295 3.181461 GGCTCACAGATACAAGGCTACAT 60.181 47.826 0.00 0.00 0.00 2.29
5083 5296 2.168521 GGCTCACAGATACAAGGCTACA 59.831 50.000 0.00 0.00 0.00 2.74
5084 5297 2.168521 TGGCTCACAGATACAAGGCTAC 59.831 50.000 0.00 0.00 35.50 3.58
5085 5298 2.466846 TGGCTCACAGATACAAGGCTA 58.533 47.619 0.00 0.00 35.50 3.93
5086 5299 1.279496 TGGCTCACAGATACAAGGCT 58.721 50.000 0.00 0.00 35.50 4.58
5087 5300 1.945394 CATGGCTCACAGATACAAGGC 59.055 52.381 0.00 0.00 35.08 4.35
5088 5301 2.092753 ACCATGGCTCACAGATACAAGG 60.093 50.000 13.04 0.00 0.00 3.61
5089 5302 3.272574 ACCATGGCTCACAGATACAAG 57.727 47.619 13.04 0.00 0.00 3.16
5090 5303 3.719268 AACCATGGCTCACAGATACAA 57.281 42.857 13.04 0.00 0.00 2.41
5091 5304 3.719268 AAACCATGGCTCACAGATACA 57.281 42.857 13.04 0.00 0.00 2.29
5092 5305 3.758554 ACAAAACCATGGCTCACAGATAC 59.241 43.478 13.04 0.00 0.00 2.24
5093 5306 4.032960 ACAAAACCATGGCTCACAGATA 57.967 40.909 13.04 0.00 0.00 1.98
5094 5307 2.880443 ACAAAACCATGGCTCACAGAT 58.120 42.857 13.04 0.00 0.00 2.90
5095 5308 2.363306 ACAAAACCATGGCTCACAGA 57.637 45.000 13.04 0.00 0.00 3.41
5096 5309 4.582701 TTTACAAAACCATGGCTCACAG 57.417 40.909 13.04 0.00 0.00 3.66
5097 5310 4.688021 GTTTTACAAAACCATGGCTCACA 58.312 39.130 13.04 0.00 41.77 3.58
5108 5321 7.708998 TCTGTTGGGTGATAGTTTTACAAAAC 58.291 34.615 9.11 9.11 46.54 2.43
5109 5322 7.883391 TCTGTTGGGTGATAGTTTTACAAAA 57.117 32.000 0.00 0.00 0.00 2.44
5110 5323 7.883391 TTCTGTTGGGTGATAGTTTTACAAA 57.117 32.000 0.00 0.00 0.00 2.83
5111 5324 7.883391 TTTCTGTTGGGTGATAGTTTTACAA 57.117 32.000 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.