Multiple sequence alignment - TraesCS7A01G015700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G015700 chr7A 100.000 2575 0 0 1 2575 6754752 6757326 0.000000e+00 4756.0
1 TraesCS7A01G015700 chr7A 86.389 529 66 3 195 717 670686076 670686604 7.990000e-160 573.0
2 TraesCS7A01G015700 chr7A 82.787 366 43 12 1012 1372 6663887 6664237 2.490000e-80 309.0
3 TraesCS7A01G015700 chr7A 96.875 128 3 1 1 128 664530909 664530783 2.010000e-51 213.0
4 TraesCS7A01G015700 chr7A 96.094 128 1 2 1 128 109838237 109838114 3.360000e-49 206.0
5 TraesCS7A01G015700 chr6B 92.745 703 46 2 1877 2575 677130668 677131369 0.000000e+00 1011.0
6 TraesCS7A01G015700 chr6B 83.926 703 97 8 1885 2575 572183952 572184650 0.000000e+00 658.0
7 TraesCS7A01G015700 chr6B 84.571 175 12 3 1705 1879 677130474 677130633 2.650000e-35 159.0
8 TraesCS7A01G015700 chr6B 88.571 70 7 1 1585 1653 31732025 31732094 1.640000e-12 84.2
9 TraesCS7A01G015700 chr7D 89.943 706 63 4 1877 2575 557714198 557714902 0.000000e+00 904.0
10 TraesCS7A01G015700 chr7D 89.205 176 18 1 1705 1879 557713988 557714163 4.310000e-53 219.0
11 TraesCS7A01G015700 chr3D 88.385 706 62 8 1883 2575 498104294 498104992 0.000000e+00 832.0
12 TraesCS7A01G015700 chr3D 93.182 176 11 1 1705 1879 459487502 459487677 9.140000e-65 257.0
13 TraesCS7A01G015700 chr3D 93.443 61 4 0 1593 1653 326955246 326955186 9.810000e-15 91.6
14 TraesCS7A01G015700 chr3D 90.909 66 6 0 1588 1653 7259781 7259716 3.530000e-14 89.8
15 TraesCS7A01G015700 chr5D 88.045 711 71 8 1877 2574 542468889 542469598 0.000000e+00 830.0
16 TraesCS7A01G015700 chr5D 85.556 540 71 4 195 728 520111156 520111694 2.240000e-155 558.0
17 TraesCS7A01G015700 chr2D 84.129 712 99 7 1877 2575 304973618 304974328 0.000000e+00 676.0
18 TraesCS7A01G015700 chr2D 82.427 717 106 14 1877 2575 601081014 601080300 2.190000e-170 608.0
19 TraesCS7A01G015700 chr4D 83.590 713 101 11 1877 2575 19066197 19066907 0.000000e+00 654.0
20 TraesCS7A01G015700 chr4D 90.278 72 7 0 1582 1653 449913302 449913231 7.590000e-16 95.3
21 TraesCS7A01G015700 chr3A 82.609 713 104 12 1877 2574 719382948 719383655 1.690000e-171 612.0
22 TraesCS7A01G015700 chr3A 97.692 130 0 2 1 128 63842860 63842988 1.200000e-53 220.0
23 TraesCS7A01G015700 chr7B 82.278 711 113 9 1878 2575 741972728 741972018 1.020000e-168 603.0
24 TraesCS7A01G015700 chr6D 85.900 539 70 3 195 727 27033613 27034151 1.030000e-158 569.0
25 TraesCS7A01G015700 chr6D 85.556 540 70 5 195 727 68329274 68328736 2.240000e-155 558.0
26 TraesCS7A01G015700 chr6D 95.082 61 3 0 1593 1653 90224379 90224319 2.110000e-16 97.1
27 TraesCS7A01G015700 chr6D 92.063 63 2 3 1588 1647 445581716 445581778 4.570000e-13 86.1
28 TraesCS7A01G015700 chr1D 85.900 539 69 5 195 727 375353236 375352699 3.720000e-158 568.0
29 TraesCS7A01G015700 chr1D 92.045 176 13 1 1705 1879 295274685 295274510 1.980000e-61 246.0
30 TraesCS7A01G015700 chrUn 85.822 529 68 4 195 717 434813850 434814377 2.890000e-154 555.0
31 TraesCS7A01G015700 chr5B 85.343 539 73 4 195 727 294125507 294124969 1.040000e-153 553.0
32 TraesCS7A01G015700 chr2B 85.185 540 72 6 195 728 373901323 373900786 4.840000e-152 547.0
33 TraesCS7A01G015700 chr2B 84.268 553 80 4 182 727 681736740 681736188 1.360000e-147 532.0
34 TraesCS7A01G015700 chr2B 96.094 128 3 1 1 128 717064636 717064761 9.340000e-50 207.0
35 TraesCS7A01G015700 chr2B 96.094 128 2 1 1 128 733857746 733857870 3.360000e-49 206.0
36 TraesCS7A01G015700 chr2B 92.424 66 5 0 1588 1653 681711679 681711744 7.590000e-16 95.3
37 TraesCS7A01G015700 chr4A 81.439 695 79 28 809 1474 737168613 737167940 8.160000e-145 523.0
38 TraesCS7A01G015700 chr4A 93.443 61 4 0 1590 1650 695551402 695551462 9.810000e-15 91.6
39 TraesCS7A01G015700 chr1A 96.124 129 4 1 1 128 588220102 588220230 2.600000e-50 209.0
40 TraesCS7A01G015700 chr1B 96.124 129 2 1 1 129 327418497 327418622 9.340000e-50 207.0
41 TraesCS7A01G015700 chr1B 95.385 130 1 1 1 130 388197482 388197606 4.340000e-48 202.0
42 TraesCS7A01G015700 chr4B 95.312 128 4 1 1 128 122271998 122271873 4.340000e-48 202.0
43 TraesCS7A01G015700 chr4B 93.846 65 4 0 1589 1653 619190877 619190941 5.860000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G015700 chr7A 6754752 6757326 2574 False 4756.0 4756 100.000 1 2575 1 chr7A.!!$F2 2574
1 TraesCS7A01G015700 chr7A 670686076 670686604 528 False 573.0 573 86.389 195 717 1 chr7A.!!$F3 522
2 TraesCS7A01G015700 chr6B 572183952 572184650 698 False 658.0 658 83.926 1885 2575 1 chr6B.!!$F2 690
3 TraesCS7A01G015700 chr6B 677130474 677131369 895 False 585.0 1011 88.658 1705 2575 2 chr6B.!!$F3 870
4 TraesCS7A01G015700 chr7D 557713988 557714902 914 False 561.5 904 89.574 1705 2575 2 chr7D.!!$F1 870
5 TraesCS7A01G015700 chr3D 498104294 498104992 698 False 832.0 832 88.385 1883 2575 1 chr3D.!!$F2 692
6 TraesCS7A01G015700 chr5D 542468889 542469598 709 False 830.0 830 88.045 1877 2574 1 chr5D.!!$F2 697
7 TraesCS7A01G015700 chr5D 520111156 520111694 538 False 558.0 558 85.556 195 728 1 chr5D.!!$F1 533
8 TraesCS7A01G015700 chr2D 304973618 304974328 710 False 676.0 676 84.129 1877 2575 1 chr2D.!!$F1 698
9 TraesCS7A01G015700 chr2D 601080300 601081014 714 True 608.0 608 82.427 1877 2575 1 chr2D.!!$R1 698
10 TraesCS7A01G015700 chr4D 19066197 19066907 710 False 654.0 654 83.590 1877 2575 1 chr4D.!!$F1 698
11 TraesCS7A01G015700 chr3A 719382948 719383655 707 False 612.0 612 82.609 1877 2574 1 chr3A.!!$F2 697
12 TraesCS7A01G015700 chr7B 741972018 741972728 710 True 603.0 603 82.278 1878 2575 1 chr7B.!!$R1 697
13 TraesCS7A01G015700 chr6D 27033613 27034151 538 False 569.0 569 85.900 195 727 1 chr6D.!!$F1 532
14 TraesCS7A01G015700 chr6D 68328736 68329274 538 True 558.0 558 85.556 195 727 1 chr6D.!!$R1 532
15 TraesCS7A01G015700 chr1D 375352699 375353236 537 True 568.0 568 85.900 195 727 1 chr1D.!!$R2 532
16 TraesCS7A01G015700 chrUn 434813850 434814377 527 False 555.0 555 85.822 195 717 1 chrUn.!!$F1 522
17 TraesCS7A01G015700 chr5B 294124969 294125507 538 True 553.0 553 85.343 195 727 1 chr5B.!!$R1 532
18 TraesCS7A01G015700 chr2B 373900786 373901323 537 True 547.0 547 85.185 195 728 1 chr2B.!!$R1 533
19 TraesCS7A01G015700 chr2B 681736188 681736740 552 True 532.0 532 84.268 182 727 1 chr2B.!!$R2 545
20 TraesCS7A01G015700 chr4A 737167940 737168613 673 True 523.0 523 81.439 809 1474 1 chr4A.!!$R1 665

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
989 1002 0.033405 TCTCTCTCTACCCCCGTTGG 60.033 60.0 0.0 0.0 0.0 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2472 2570 0.034089 GGGACAATGTCTCCCCCTTG 60.034 60.0 13.53 0.0 41.7 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.766277 TTGTAATTTTTAACTTGCTTTTTGCTG 57.234 25.926 0.00 0.00 43.37 4.41
32 33 8.394121 TGTAATTTTTAACTTGCTTTTTGCTGG 58.606 29.630 0.00 0.00 43.37 4.85
33 34 5.809719 TTTTTAACTTGCTTTTTGCTGGG 57.190 34.783 0.00 0.00 43.37 4.45
34 35 2.524569 TAACTTGCTTTTTGCTGGGC 57.475 45.000 0.00 0.00 43.37 5.36
35 36 0.832626 AACTTGCTTTTTGCTGGGCT 59.167 45.000 0.00 0.00 43.37 5.19
36 37 1.703411 ACTTGCTTTTTGCTGGGCTA 58.297 45.000 0.00 0.00 43.37 3.93
37 38 2.250924 ACTTGCTTTTTGCTGGGCTAT 58.749 42.857 0.00 0.00 43.37 2.97
38 39 3.430453 ACTTGCTTTTTGCTGGGCTATA 58.570 40.909 0.00 0.00 43.37 1.31
39 40 3.445096 ACTTGCTTTTTGCTGGGCTATAG 59.555 43.478 0.00 0.00 43.37 1.31
40 41 3.085952 TGCTTTTTGCTGGGCTATAGT 57.914 42.857 0.84 0.00 43.37 2.12
41 42 4.229304 TGCTTTTTGCTGGGCTATAGTA 57.771 40.909 0.84 0.00 43.37 1.82
42 43 4.792068 TGCTTTTTGCTGGGCTATAGTAT 58.208 39.130 0.84 0.00 43.37 2.12
43 44 5.935945 TGCTTTTTGCTGGGCTATAGTATA 58.064 37.500 0.84 0.00 43.37 1.47
44 45 6.542821 TGCTTTTTGCTGGGCTATAGTATAT 58.457 36.000 0.84 0.00 43.37 0.86
45 46 6.430925 TGCTTTTTGCTGGGCTATAGTATATG 59.569 38.462 0.84 0.00 43.37 1.78
46 47 6.431234 GCTTTTTGCTGGGCTATAGTATATGT 59.569 38.462 0.84 0.00 38.95 2.29
47 48 7.606456 GCTTTTTGCTGGGCTATAGTATATGTA 59.394 37.037 0.84 0.00 38.95 2.29
48 49 9.672673 CTTTTTGCTGGGCTATAGTATATGTAT 57.327 33.333 0.84 0.00 0.00 2.29
65 66 9.698309 GTATATGTATATACTCCATCATGTGCC 57.302 37.037 13.89 0.00 41.05 5.01
66 67 5.420725 TGTATATACTCCATCATGTGCCC 57.579 43.478 13.89 0.00 0.00 5.36
67 68 4.225042 TGTATATACTCCATCATGTGCCCC 59.775 45.833 13.89 0.00 0.00 5.80
68 69 0.773644 ATACTCCATCATGTGCCCCC 59.226 55.000 0.00 0.00 0.00 5.40
134 135 3.717294 GGCCGGCCCTGAGAAGAA 61.717 66.667 36.64 0.00 0.00 2.52
135 136 2.592308 GCCGGCCCTGAGAAGAAT 59.408 61.111 18.11 0.00 0.00 2.40
136 137 1.821332 GCCGGCCCTGAGAAGAATG 60.821 63.158 18.11 0.00 0.00 2.67
137 138 1.153086 CCGGCCCTGAGAAGAATGG 60.153 63.158 0.00 0.00 0.00 3.16
138 139 1.153086 CGGCCCTGAGAAGAATGGG 60.153 63.158 0.00 0.00 42.41 4.00
139 140 1.228510 GGCCCTGAGAAGAATGGGG 59.771 63.158 0.00 0.00 39.99 4.96
140 141 1.228510 GCCCTGAGAAGAATGGGGG 59.771 63.158 0.00 0.00 39.99 5.40
141 142 1.575447 GCCCTGAGAAGAATGGGGGT 61.575 60.000 0.00 0.00 39.99 4.95
142 143 0.257039 CCCTGAGAAGAATGGGGGTG 59.743 60.000 0.00 0.00 36.15 4.61
143 144 0.257039 CCTGAGAAGAATGGGGGTGG 59.743 60.000 0.00 0.00 0.00 4.61
144 145 0.257039 CTGAGAAGAATGGGGGTGGG 59.743 60.000 0.00 0.00 0.00 4.61
145 146 0.477597 TGAGAAGAATGGGGGTGGGT 60.478 55.000 0.00 0.00 0.00 4.51
146 147 1.203505 TGAGAAGAATGGGGGTGGGTA 60.204 52.381 0.00 0.00 0.00 3.69
147 148 1.212195 GAGAAGAATGGGGGTGGGTAC 59.788 57.143 0.00 0.00 0.00 3.34
148 149 0.996583 GAAGAATGGGGGTGGGTACA 59.003 55.000 0.00 0.00 0.00 2.90
149 150 0.999712 AAGAATGGGGGTGGGTACAG 59.000 55.000 0.00 0.00 0.00 2.74
150 151 0.120377 AGAATGGGGGTGGGTACAGA 59.880 55.000 0.00 0.00 0.00 3.41
151 152 0.996583 GAATGGGGGTGGGTACAGAA 59.003 55.000 0.00 0.00 0.00 3.02
152 153 0.702316 AATGGGGGTGGGTACAGAAC 59.298 55.000 0.00 0.00 0.00 3.01
153 154 0.178843 ATGGGGGTGGGTACAGAACT 60.179 55.000 0.00 0.00 0.00 3.01
154 155 0.402272 TGGGGGTGGGTACAGAACTT 60.402 55.000 0.00 0.00 0.00 2.66
155 156 1.132462 TGGGGGTGGGTACAGAACTTA 60.132 52.381 0.00 0.00 0.00 2.24
156 157 1.558294 GGGGGTGGGTACAGAACTTAG 59.442 57.143 0.00 0.00 0.00 2.18
157 158 2.543635 GGGGTGGGTACAGAACTTAGA 58.456 52.381 0.00 0.00 0.00 2.10
158 159 3.113043 GGGGTGGGTACAGAACTTAGAT 58.887 50.000 0.00 0.00 0.00 1.98
159 160 4.292643 GGGGTGGGTACAGAACTTAGATA 58.707 47.826 0.00 0.00 0.00 1.98
160 161 4.100653 GGGGTGGGTACAGAACTTAGATAC 59.899 50.000 0.00 0.00 0.00 2.24
161 162 4.961099 GGGTGGGTACAGAACTTAGATACT 59.039 45.833 0.00 0.00 0.00 2.12
162 163 5.068855 GGGTGGGTACAGAACTTAGATACTC 59.931 48.000 0.00 0.00 0.00 2.59
163 164 5.068855 GGTGGGTACAGAACTTAGATACTCC 59.931 48.000 0.00 0.00 0.00 3.85
164 165 5.655532 GTGGGTACAGAACTTAGATACTCCA 59.344 44.000 0.00 0.00 0.00 3.86
165 166 5.655532 TGGGTACAGAACTTAGATACTCCAC 59.344 44.000 0.00 0.00 0.00 4.02
166 167 5.221009 GGGTACAGAACTTAGATACTCCACG 60.221 48.000 0.00 0.00 0.00 4.94
167 168 4.985538 ACAGAACTTAGATACTCCACGG 57.014 45.455 0.00 0.00 0.00 4.94
168 169 4.597004 ACAGAACTTAGATACTCCACGGA 58.403 43.478 0.00 0.00 0.00 4.69
169 170 5.014858 ACAGAACTTAGATACTCCACGGAA 58.985 41.667 0.00 0.00 0.00 4.30
170 171 5.479375 ACAGAACTTAGATACTCCACGGAAA 59.521 40.000 0.00 0.00 0.00 3.13
171 172 5.805994 CAGAACTTAGATACTCCACGGAAAC 59.194 44.000 0.00 0.00 0.00 2.78
172 173 5.479375 AGAACTTAGATACTCCACGGAAACA 59.521 40.000 0.00 0.00 0.00 2.83
173 174 5.733620 ACTTAGATACTCCACGGAAACAA 57.266 39.130 0.00 0.00 0.00 2.83
174 175 5.721232 ACTTAGATACTCCACGGAAACAAG 58.279 41.667 0.00 0.00 0.00 3.16
175 176 5.245526 ACTTAGATACTCCACGGAAACAAGT 59.754 40.000 0.00 0.00 0.00 3.16
176 177 4.189639 AGATACTCCACGGAAACAAGTC 57.810 45.455 0.00 0.00 0.00 3.01
177 178 3.833070 AGATACTCCACGGAAACAAGTCT 59.167 43.478 0.00 0.00 0.00 3.24
178 179 2.240493 ACTCCACGGAAACAAGTCTG 57.760 50.000 0.00 0.00 0.00 3.51
179 180 1.202651 ACTCCACGGAAACAAGTCTGG 60.203 52.381 0.00 0.00 0.00 3.86
180 181 0.834612 TCCACGGAAACAAGTCTGGT 59.165 50.000 0.00 0.00 0.00 4.00
181 182 0.944386 CCACGGAAACAAGTCTGGTG 59.056 55.000 0.00 0.00 0.00 4.17
182 183 1.663695 CACGGAAACAAGTCTGGTGT 58.336 50.000 0.00 0.00 0.00 4.16
183 184 1.330521 CACGGAAACAAGTCTGGTGTG 59.669 52.381 0.00 0.00 0.00 3.82
184 185 0.944386 CGGAAACAAGTCTGGTGTGG 59.056 55.000 0.00 0.00 0.00 4.17
185 186 1.745827 CGGAAACAAGTCTGGTGTGGT 60.746 52.381 0.00 0.00 0.00 4.16
187 188 2.421529 GGAAACAAGTCTGGTGTGGTCT 60.422 50.000 0.00 0.00 0.00 3.85
191 192 0.759436 AAGTCTGGTGTGGTCTCGGT 60.759 55.000 0.00 0.00 0.00 4.69
192 193 0.111832 AGTCTGGTGTGGTCTCGGTA 59.888 55.000 0.00 0.00 0.00 4.02
248 249 7.494298 TGCTTCTTCAAATTTTGTTAGGGTTTC 59.506 33.333 8.89 0.40 0.00 2.78
249 250 7.306574 GCTTCTTCAAATTTTGTTAGGGTTTCG 60.307 37.037 8.89 0.00 0.00 3.46
259 261 1.601419 TAGGGTTTCGGTCCTGCTCG 61.601 60.000 0.00 0.00 34.75 5.03
267 269 2.283529 GGTCCTGCTCGGGAAGACA 61.284 63.158 0.00 0.00 37.10 3.41
289 291 2.254350 GGCGGCGGTTTCTTGAAC 59.746 61.111 9.78 0.00 37.53 3.18
367 369 0.826256 AGAGCGTGTGGAGGTGTGTA 60.826 55.000 0.00 0.00 0.00 2.90
404 406 0.320073 GATTCGGTCGGTGGTTGTCA 60.320 55.000 0.00 0.00 0.00 3.58
424 427 3.054213 TCATTGGTGATCTGCTTGGATCA 60.054 43.478 11.49 11.49 46.50 2.92
495 498 2.890808 AAGCTTATCTTCATCGGCGA 57.109 45.000 13.87 13.87 0.00 5.54
561 567 5.561532 CGACTTTCCGACTGTCTACTACAAA 60.562 44.000 6.21 0.00 37.74 2.83
569 575 6.257193 CCGACTGTCTACTACAAAAAGTTGTT 59.743 38.462 6.21 0.00 46.01 2.83
604 611 2.607750 AGGGGTGATGACGGCAGT 60.608 61.111 0.00 0.00 0.00 4.40
624 631 3.354678 GCCTTTGGCTCGCTTGAA 58.645 55.556 0.73 0.00 46.69 2.69
728 737 9.790344 ATAAGATGAATAGATGGGAAGTTTCTG 57.210 33.333 0.00 0.00 0.00 3.02
729 738 6.599445 AGATGAATAGATGGGAAGTTTCTGG 58.401 40.000 0.00 0.00 0.00 3.86
730 739 5.779241 TGAATAGATGGGAAGTTTCTGGT 57.221 39.130 0.00 0.00 0.00 4.00
731 740 5.745227 TGAATAGATGGGAAGTTTCTGGTC 58.255 41.667 0.00 0.00 0.00 4.02
732 741 5.488919 TGAATAGATGGGAAGTTTCTGGTCT 59.511 40.000 0.00 0.00 0.00 3.85
733 742 3.710209 AGATGGGAAGTTTCTGGTCTG 57.290 47.619 0.00 0.00 0.00 3.51
734 743 3.251484 AGATGGGAAGTTTCTGGTCTGA 58.749 45.455 0.00 0.00 0.00 3.27
735 744 3.848975 AGATGGGAAGTTTCTGGTCTGAT 59.151 43.478 0.00 0.00 0.00 2.90
736 745 4.290722 AGATGGGAAGTTTCTGGTCTGATT 59.709 41.667 0.00 0.00 0.00 2.57
737 746 4.021102 TGGGAAGTTTCTGGTCTGATTC 57.979 45.455 0.00 0.00 0.00 2.52
738 747 3.003480 GGGAAGTTTCTGGTCTGATTCG 58.997 50.000 0.00 0.00 0.00 3.34
739 748 3.003480 GGAAGTTTCTGGTCTGATTCGG 58.997 50.000 0.00 0.00 0.00 4.30
740 749 2.100605 AGTTTCTGGTCTGATTCGGC 57.899 50.000 0.00 0.00 0.00 5.54
741 750 1.625818 AGTTTCTGGTCTGATTCGGCT 59.374 47.619 0.00 0.00 0.00 5.52
742 751 2.832129 AGTTTCTGGTCTGATTCGGCTA 59.168 45.455 0.00 0.00 0.00 3.93
743 752 3.260884 AGTTTCTGGTCTGATTCGGCTAA 59.739 43.478 0.00 0.00 0.00 3.09
744 753 2.961526 TCTGGTCTGATTCGGCTAAC 57.038 50.000 0.00 0.00 0.00 2.34
745 754 2.176045 TCTGGTCTGATTCGGCTAACA 58.824 47.619 0.00 0.00 0.00 2.41
746 755 2.565391 TCTGGTCTGATTCGGCTAACAA 59.435 45.455 0.00 0.00 0.00 2.83
747 756 2.673368 CTGGTCTGATTCGGCTAACAAC 59.327 50.000 0.00 0.00 0.00 3.32
748 757 1.659098 GGTCTGATTCGGCTAACAACG 59.341 52.381 0.00 0.00 0.00 4.10
749 758 1.659098 GTCTGATTCGGCTAACAACGG 59.341 52.381 0.00 0.00 0.00 4.44
750 759 1.546923 TCTGATTCGGCTAACAACGGA 59.453 47.619 0.00 0.00 0.00 4.69
751 760 1.659098 CTGATTCGGCTAACAACGGAC 59.341 52.381 0.00 0.00 0.00 4.79
752 761 1.004595 GATTCGGCTAACAACGGACC 58.995 55.000 0.00 0.00 0.00 4.46
753 762 0.392060 ATTCGGCTAACAACGGACCC 60.392 55.000 0.00 0.00 0.00 4.46
754 763 2.435410 CGGCTAACAACGGACCCC 60.435 66.667 0.00 0.00 0.00 4.95
755 764 2.751688 GGCTAACAACGGACCCCA 59.248 61.111 0.00 0.00 0.00 4.96
756 765 1.673337 GGCTAACAACGGACCCCAC 60.673 63.158 0.00 0.00 0.00 4.61
757 766 1.071814 GCTAACAACGGACCCCACA 59.928 57.895 0.00 0.00 0.00 4.17
758 767 0.953960 GCTAACAACGGACCCCACAG 60.954 60.000 0.00 0.00 0.00 3.66
759 768 0.395312 CTAACAACGGACCCCACAGT 59.605 55.000 0.00 0.00 0.00 3.55
760 769 1.619827 CTAACAACGGACCCCACAGTA 59.380 52.381 0.00 0.00 0.00 2.74
761 770 1.061546 AACAACGGACCCCACAGTAT 58.938 50.000 0.00 0.00 0.00 2.12
762 771 0.323629 ACAACGGACCCCACAGTATG 59.676 55.000 0.00 0.00 46.00 2.39
763 772 0.611200 CAACGGACCCCACAGTATGA 59.389 55.000 0.00 0.00 39.69 2.15
764 773 0.902531 AACGGACCCCACAGTATGAG 59.097 55.000 0.00 0.00 39.69 2.90
765 774 0.252103 ACGGACCCCACAGTATGAGT 60.252 55.000 0.00 0.00 39.69 3.41
766 775 0.175760 CGGACCCCACAGTATGAGTG 59.824 60.000 0.00 0.00 39.69 3.51
767 776 1.276622 GGACCCCACAGTATGAGTGT 58.723 55.000 0.00 0.00 39.69 3.55
768 777 1.066143 GGACCCCACAGTATGAGTGTG 60.066 57.143 7.35 7.35 46.39 3.82
769 778 0.324943 ACCCCACAGTATGAGTGTGC 59.675 55.000 8.62 0.00 45.69 4.57
770 779 0.740868 CCCCACAGTATGAGTGTGCG 60.741 60.000 8.62 1.27 45.69 5.34
771 780 0.246360 CCCACAGTATGAGTGTGCGA 59.754 55.000 8.62 0.00 45.69 5.10
772 781 1.633561 CCACAGTATGAGTGTGCGAG 58.366 55.000 8.62 0.00 45.69 5.03
773 782 1.633561 CACAGTATGAGTGTGCGAGG 58.366 55.000 1.69 0.00 41.94 4.63
774 783 0.532573 ACAGTATGAGTGTGCGAGGG 59.467 55.000 0.00 0.00 39.69 4.30
775 784 0.807667 CAGTATGAGTGTGCGAGGGC 60.808 60.000 0.00 0.00 39.69 5.19
776 785 3.430214 CAGTATGAGTGTGCGAGGGCA 62.430 57.143 0.00 0.00 44.02 5.36
777 786 4.869086 CAGTATGAGTGTGCGAGGGCAA 62.869 54.545 0.00 0.00 46.98 4.52
785 794 4.043200 GCGAGGGCAAACCACAGC 62.043 66.667 0.00 0.00 43.89 4.40
786 795 3.726517 CGAGGGCAAACCACAGCG 61.727 66.667 0.00 0.00 43.89 5.18
787 796 4.043200 GAGGGCAAACCACAGCGC 62.043 66.667 0.00 0.00 43.89 5.92
788 797 4.892965 AGGGCAAACCACAGCGCA 62.893 61.111 11.47 0.00 45.01 6.09
789 798 4.347453 GGGCAAACCACAGCGCAG 62.347 66.667 11.47 3.33 42.51 5.18
803 812 3.511182 CGCAGCAGATGGGAGATAG 57.489 57.895 0.00 0.00 44.43 2.08
804 813 0.669932 CGCAGCAGATGGGAGATAGC 60.670 60.000 0.00 0.00 44.43 2.97
805 814 0.669932 GCAGCAGATGGGAGATAGCG 60.670 60.000 0.00 0.00 0.00 4.26
806 815 0.964700 CAGCAGATGGGAGATAGCGA 59.035 55.000 0.00 0.00 0.00 4.93
807 816 1.549620 CAGCAGATGGGAGATAGCGAT 59.450 52.381 0.00 0.00 0.00 4.58
818 827 1.215655 GATAGCGATGTCACGGCCAC 61.216 60.000 2.24 0.00 0.00 5.01
830 839 2.752354 TCACGGCCACCAAGATATTTTG 59.248 45.455 2.24 0.00 0.00 2.44
831 840 1.476488 ACGGCCACCAAGATATTTTGC 59.524 47.619 2.24 0.00 0.00 3.68
833 842 2.166254 CGGCCACCAAGATATTTTGCTT 59.834 45.455 2.24 0.00 0.00 3.91
853 862 4.082026 GCTTGCCAATAATTGACTCCTTGT 60.082 41.667 0.00 0.00 0.00 3.16
854 863 5.125417 GCTTGCCAATAATTGACTCCTTGTA 59.875 40.000 0.00 0.00 0.00 2.41
855 864 6.509418 TTGCCAATAATTGACTCCTTGTAC 57.491 37.500 0.00 0.00 0.00 2.90
860 869 8.202137 GCCAATAATTGACTCCTTGTACTAGTA 58.798 37.037 0.00 0.00 0.00 1.82
879 888 0.251386 ACTCTTCCAGTCGAGCAGGA 60.251 55.000 0.00 0.00 0.00 3.86
880 889 1.110442 CTCTTCCAGTCGAGCAGGAT 58.890 55.000 1.67 0.00 32.54 3.24
886 898 1.339055 CCAGTCGAGCAGGATTTTGGA 60.339 52.381 0.00 0.00 0.00 3.53
888 900 2.611292 CAGTCGAGCAGGATTTTGGATC 59.389 50.000 0.00 0.00 0.00 3.36
892 904 2.580962 GAGCAGGATTTTGGATCTCCC 58.419 52.381 0.00 0.00 34.29 4.30
912 924 1.883275 CTTCGGCCGACTCAGATCTAT 59.117 52.381 31.19 0.00 0.00 1.98
917 929 2.545946 GGCCGACTCAGATCTATTTTGC 59.454 50.000 0.00 0.00 0.00 3.68
919 931 3.742640 GCCGACTCAGATCTATTTTGCCT 60.743 47.826 0.00 0.00 0.00 4.75
921 933 4.509600 CCGACTCAGATCTATTTTGCCTTC 59.490 45.833 0.00 0.00 0.00 3.46
922 934 5.355596 CGACTCAGATCTATTTTGCCTTCT 58.644 41.667 0.00 0.00 0.00 2.85
958 971 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
959 972 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
960 973 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
961 974 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
962 975 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
963 976 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
964 977 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
965 978 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
966 979 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
967 980 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
968 981 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
969 982 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
970 983 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
971 984 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
975 988 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
984 997 2.372172 CTCTCTCTCTCTCTCTACCCCC 59.628 59.091 0.00 0.00 0.00 5.40
985 998 1.071699 CTCTCTCTCTCTCTACCCCCG 59.928 61.905 0.00 0.00 0.00 5.73
987 1000 1.213430 CTCTCTCTCTCTACCCCCGTT 59.787 57.143 0.00 0.00 0.00 4.44
989 1002 0.033405 TCTCTCTCTACCCCCGTTGG 60.033 60.000 0.00 0.00 0.00 3.77
990 1003 1.677637 CTCTCTCTACCCCCGTTGGC 61.678 65.000 0.00 0.00 0.00 4.52
991 1004 1.686110 CTCTCTACCCCCGTTGGCT 60.686 63.158 0.00 0.00 0.00 4.75
1026 1039 3.048600 TGCCAGGAAGGTGATTATAGCT 58.951 45.455 0.00 0.00 40.61 3.32
1027 1040 3.181451 TGCCAGGAAGGTGATTATAGCTG 60.181 47.826 0.00 0.00 40.61 4.24
1029 1042 4.802248 GCCAGGAAGGTGATTATAGCTGAG 60.802 50.000 0.00 0.00 40.61 3.35
1050 1063 5.766670 TGAGAACTCTTGCTGATTCATTTGT 59.233 36.000 3.51 0.00 0.00 2.83
1067 1080 1.246649 TGTAGTTGTTGCATGCCCTG 58.753 50.000 16.68 0.00 0.00 4.45
1106 1128 0.869454 CTCGGTTGCTCATCTCGCTC 60.869 60.000 0.00 0.00 0.00 5.03
1131 1153 4.744795 TCTCTAAGGAAGGATTGCAGAC 57.255 45.455 0.00 0.00 39.77 3.51
1168 1190 3.385193 TGTTCTCTGACGATTGCAGAA 57.615 42.857 8.02 0.00 41.45 3.02
1169 1191 3.320626 TGTTCTCTGACGATTGCAGAAG 58.679 45.455 8.02 4.28 41.45 2.85
1170 1192 3.005791 TGTTCTCTGACGATTGCAGAAGA 59.994 43.478 8.02 5.89 41.45 2.87
1184 1206 2.872038 GCAGAAGATCGTGGTGAAGGTT 60.872 50.000 0.00 0.00 0.00 3.50
1188 1210 1.276421 AGATCGTGGTGAAGGTTGAGG 59.724 52.381 0.00 0.00 0.00 3.86
1192 1214 1.616865 CGTGGTGAAGGTTGAGGTAGA 59.383 52.381 0.00 0.00 0.00 2.59
1193 1215 2.609737 CGTGGTGAAGGTTGAGGTAGAC 60.610 54.545 0.00 0.00 0.00 2.59
1197 1219 2.295349 GTGAAGGTTGAGGTAGACGACA 59.705 50.000 0.00 0.00 0.00 4.35
1198 1220 2.557056 TGAAGGTTGAGGTAGACGACAG 59.443 50.000 0.00 0.00 0.00 3.51
1201 1223 0.601558 GTTGAGGTAGACGACAGCCA 59.398 55.000 0.00 0.00 0.00 4.75
1203 1225 0.037734 TGAGGTAGACGACAGCCAGA 59.962 55.000 0.00 0.00 0.00 3.86
1204 1226 0.736053 GAGGTAGACGACAGCCAGAG 59.264 60.000 0.00 0.00 0.00 3.35
1205 1227 1.139947 GGTAGACGACAGCCAGAGC 59.860 63.158 0.00 0.00 40.32 4.09
1207 1229 0.179150 GTAGACGACAGCCAGAGCAG 60.179 60.000 0.00 0.00 43.56 4.24
1215 1240 4.087892 GCCAGAGCAGGAAGGCGA 62.088 66.667 0.00 0.00 37.41 5.54
1224 1249 0.449388 CAGGAAGGCGATCAAAGCAC 59.551 55.000 0.00 0.00 36.08 4.40
1229 1254 0.901124 AGGCGATCAAAGCACTCTCT 59.099 50.000 0.00 0.00 36.08 3.10
1230 1255 2.103373 AGGCGATCAAAGCACTCTCTA 58.897 47.619 0.00 0.00 36.08 2.43
1237 1262 2.750166 TCAAAGCACTCTCTACTCTCCG 59.250 50.000 0.00 0.00 0.00 4.63
1250 1287 3.988976 ACTCTCCGTGGTACTACTACA 57.011 47.619 7.83 0.00 29.27 2.74
1253 1290 4.260170 CTCTCCGTGGTACTACTACAACT 58.740 47.826 7.83 0.00 29.27 3.16
1273 1310 6.434340 ACAACTTCTCTTCTTTCCAGTTTTGT 59.566 34.615 0.00 0.00 0.00 2.83
1275 1312 7.468141 ACTTCTCTTCTTTCCAGTTTTGTTT 57.532 32.000 0.00 0.00 0.00 2.83
1281 1318 7.610865 TCTTCTTTCCAGTTTTGTTTGTGAAT 58.389 30.769 0.00 0.00 0.00 2.57
1282 1319 7.759433 TCTTCTTTCCAGTTTTGTTTGTGAATC 59.241 33.333 0.00 0.00 0.00 2.52
1283 1320 6.337356 TCTTTCCAGTTTTGTTTGTGAATCC 58.663 36.000 0.00 0.00 0.00 3.01
1284 1321 4.300189 TCCAGTTTTGTTTGTGAATCCG 57.700 40.909 0.00 0.00 0.00 4.18
1289 1327 5.804979 CAGTTTTGTTTGTGAATCCGTTTCT 59.195 36.000 0.00 0.00 35.23 2.52
1310 1348 0.871163 ACGTGGACAACAACGTACGG 60.871 55.000 21.06 5.00 35.90 4.02
1325 1363 0.536687 TACGGGCCTCAGGTATCGAG 60.537 60.000 0.84 0.00 0.00 4.04
1333 1371 3.983741 CCTCAGGTATCGAGGTGATTTC 58.016 50.000 5.91 0.00 44.35 2.17
1338 1376 4.023980 AGGTATCGAGGTGATTTCTGTGA 58.976 43.478 0.00 0.00 38.57 3.58
1342 1380 3.390135 TCGAGGTGATTTCTGTGAACAC 58.610 45.455 0.00 0.00 0.00 3.32
1343 1381 2.155732 CGAGGTGATTTCTGTGAACACG 59.844 50.000 0.57 0.00 33.08 4.49
1347 1385 3.545633 GTGATTTCTGTGAACACGAAGC 58.454 45.455 0.00 0.12 0.00 3.86
1371 1409 3.678717 AAGATCACGGTCGTCGGCG 62.679 63.158 1.15 1.15 44.45 6.46
1372 1410 4.471726 GATCACGGTCGTCGGCGT 62.472 66.667 10.18 0.00 44.45 5.68
1373 1411 4.771356 ATCACGGTCGTCGGCGTG 62.771 66.667 10.18 13.23 44.45 5.34
1377 1415 4.403137 CGGTCGTCGGCGTGGTTA 62.403 66.667 10.18 0.00 39.49 2.85
1386 1424 3.113979 GCGTGGTTAACCCCGTCG 61.114 66.667 26.76 21.74 34.29 5.12
1388 1426 1.216178 CGTGGTTAACCCCGTCGAT 59.784 57.895 21.97 0.00 34.29 3.59
1389 1427 1.079875 CGTGGTTAACCCCGTCGATG 61.080 60.000 21.97 3.79 34.29 3.84
1392 1430 0.460811 GGTTAACCCCGTCGATGTCC 60.461 60.000 14.16 0.00 0.00 4.02
1399 1437 2.202797 CGTCGATGTCCTGGGCAG 60.203 66.667 7.25 0.00 0.00 4.85
1411 1449 4.722700 GGGCAGGCTGCGGAAGAA 62.723 66.667 31.22 0.00 46.21 2.52
1414 1452 1.968540 GCAGGCTGCGGAAGAAGTT 60.969 57.895 25.47 0.00 39.71 2.66
1419 1457 1.335051 GGCTGCGGAAGAAGTTGTTTC 60.335 52.381 0.00 0.00 39.71 2.78
1428 1466 1.597663 AGAAGTTGTTTCCGAACGCTG 59.402 47.619 0.00 0.00 38.65 5.18
1429 1467 1.595794 GAAGTTGTTTCCGAACGCTGA 59.404 47.619 0.00 0.00 38.65 4.26
1431 1469 1.202486 AGTTGTTTCCGAACGCTGAGA 60.202 47.619 0.00 0.00 38.65 3.27
1433 1471 1.710013 TGTTTCCGAACGCTGAGATC 58.290 50.000 0.00 0.00 38.65 2.75
1437 1475 1.934956 CCGAACGCTGAGATCGTCG 60.935 63.158 9.80 0.00 42.57 5.12
1440 1478 4.538283 ACGCTGAGATCGTCGCCG 62.538 66.667 0.00 0.00 34.84 6.46
1444 1482 2.810012 CTGAGATCGTCGCCGTCGA 61.810 63.158 9.09 9.09 43.28 4.20
1458 1496 2.044352 TCGAGCCCGTCATGGAGA 60.044 61.111 0.00 0.00 42.00 3.71
1474 1512 6.474427 GTCATGGAGACGAACGAAATTACATA 59.526 38.462 0.14 0.00 37.53 2.29
1475 1513 6.474427 TCATGGAGACGAACGAAATTACATAC 59.526 38.462 0.14 0.00 0.00 2.39
1476 1514 4.794762 TGGAGACGAACGAAATTACATACG 59.205 41.667 0.14 0.00 0.00 3.06
1477 1515 5.030295 GGAGACGAACGAAATTACATACGA 58.970 41.667 0.14 0.00 0.00 3.43
1478 1516 5.170981 GGAGACGAACGAAATTACATACGAG 59.829 44.000 0.14 0.00 0.00 4.18
1479 1517 5.634896 AGACGAACGAAATTACATACGAGT 58.365 37.500 0.14 0.00 0.00 4.18
1480 1518 6.088824 AGACGAACGAAATTACATACGAGTT 58.911 36.000 0.14 0.00 0.00 3.01
1481 1519 6.250104 AGACGAACGAAATTACATACGAGTTC 59.750 38.462 0.14 0.00 34.96 3.01
1482 1520 6.088824 ACGAACGAAATTACATACGAGTTCT 58.911 36.000 0.14 0.00 35.82 3.01
1483 1521 6.583806 ACGAACGAAATTACATACGAGTTCTT 59.416 34.615 0.14 0.00 35.82 2.52
1484 1522 6.887763 CGAACGAAATTACATACGAGTTCTTG 59.112 38.462 0.00 0.00 35.82 3.02
1485 1523 7.201291 CGAACGAAATTACATACGAGTTCTTGA 60.201 37.037 0.00 0.00 35.82 3.02
1486 1524 7.878477 ACGAAATTACATACGAGTTCTTGAA 57.122 32.000 0.00 0.00 0.00 2.69
1487 1525 7.727017 ACGAAATTACATACGAGTTCTTGAAC 58.273 34.615 5.44 5.44 0.00 3.18
1488 1526 7.148689 ACGAAATTACATACGAGTTCTTGAACC 60.149 37.037 9.58 1.93 0.00 3.62
1489 1527 7.148705 CGAAATTACATACGAGTTCTTGAACCA 60.149 37.037 9.58 0.00 0.00 3.67
1490 1528 8.561738 AAATTACATACGAGTTCTTGAACCAT 57.438 30.769 9.58 0.00 0.00 3.55
1491 1529 9.661563 AAATTACATACGAGTTCTTGAACCATA 57.338 29.630 9.58 1.76 0.00 2.74
1492 1530 9.832445 AATTACATACGAGTTCTTGAACCATAT 57.168 29.630 9.58 3.73 0.00 1.78
1493 1531 8.867112 TTACATACGAGTTCTTGAACCATATC 57.133 34.615 9.58 1.19 0.00 1.63
1494 1532 6.873997 ACATACGAGTTCTTGAACCATATCA 58.126 36.000 9.58 0.00 0.00 2.15
1495 1533 6.757010 ACATACGAGTTCTTGAACCATATCAC 59.243 38.462 9.58 0.00 0.00 3.06
1496 1534 5.147330 ACGAGTTCTTGAACCATATCACA 57.853 39.130 9.58 0.00 0.00 3.58
1497 1535 5.547465 ACGAGTTCTTGAACCATATCACAA 58.453 37.500 9.58 0.00 0.00 3.33
1498 1536 5.995282 ACGAGTTCTTGAACCATATCACAAA 59.005 36.000 9.58 0.00 0.00 2.83
1499 1537 6.073222 ACGAGTTCTTGAACCATATCACAAAC 60.073 38.462 9.58 0.00 0.00 2.93
1500 1538 6.073276 CGAGTTCTTGAACCATATCACAAACA 60.073 38.462 9.58 0.00 31.31 2.83
1501 1539 7.519809 CGAGTTCTTGAACCATATCACAAACAA 60.520 37.037 9.58 0.00 31.31 2.83
1502 1540 8.181904 AGTTCTTGAACCATATCACAAACAAT 57.818 30.769 9.58 0.00 31.31 2.71
1503 1541 8.641541 AGTTCTTGAACCATATCACAAACAATT 58.358 29.630 9.58 0.00 31.31 2.32
1504 1542 9.260002 GTTCTTGAACCATATCACAAACAATTT 57.740 29.630 2.31 0.00 30.21 1.82
1505 1543 9.474920 TTCTTGAACCATATCACAAACAATTTC 57.525 29.630 0.00 0.00 0.00 2.17
1506 1544 8.859090 TCTTGAACCATATCACAAACAATTTCT 58.141 29.630 0.00 0.00 0.00 2.52
1507 1545 9.132521 CTTGAACCATATCACAAACAATTTCTC 57.867 33.333 0.00 0.00 0.00 2.87
1508 1546 7.601856 TGAACCATATCACAAACAATTTCTCC 58.398 34.615 0.00 0.00 0.00 3.71
1509 1547 6.194796 ACCATATCACAAACAATTTCTCCG 57.805 37.500 0.00 0.00 0.00 4.63
1510 1548 5.943416 ACCATATCACAAACAATTTCTCCGA 59.057 36.000 0.00 0.00 0.00 4.55
1511 1549 6.094048 ACCATATCACAAACAATTTCTCCGAG 59.906 38.462 0.00 0.00 0.00 4.63
1512 1550 6.458751 CCATATCACAAACAATTTCTCCGAGG 60.459 42.308 0.00 0.00 0.00 4.63
1513 1551 4.079980 TCACAAACAATTTCTCCGAGGA 57.920 40.909 0.00 0.00 0.00 3.71
1514 1552 4.065088 TCACAAACAATTTCTCCGAGGAG 58.935 43.478 12.78 12.78 43.21 3.69
1515 1553 2.814336 ACAAACAATTTCTCCGAGGAGC 59.186 45.455 14.07 0.00 41.71 4.70
1516 1554 1.726853 AACAATTTCTCCGAGGAGCG 58.273 50.000 14.07 3.22 41.71 5.03
1517 1555 0.741221 ACAATTTCTCCGAGGAGCGC 60.741 55.000 14.07 0.00 41.71 5.92
1518 1556 0.740868 CAATTTCTCCGAGGAGCGCA 60.741 55.000 11.47 1.25 41.71 6.09
1519 1557 0.179000 AATTTCTCCGAGGAGCGCAT 59.821 50.000 11.47 0.00 41.71 4.73
1520 1558 1.040646 ATTTCTCCGAGGAGCGCATA 58.959 50.000 11.47 0.00 41.71 3.14
1521 1559 0.821517 TTTCTCCGAGGAGCGCATAA 59.178 50.000 11.47 0.53 41.71 1.90
1522 1560 1.040646 TTCTCCGAGGAGCGCATAAT 58.959 50.000 11.47 0.00 41.71 1.28
1523 1561 1.040646 TCTCCGAGGAGCGCATAATT 58.959 50.000 11.47 0.00 41.71 1.40
1524 1562 1.143305 CTCCGAGGAGCGCATAATTG 58.857 55.000 11.47 0.00 39.11 2.32
1525 1563 0.249868 TCCGAGGAGCGCATAATTGG 60.250 55.000 11.47 6.00 39.11 3.16
1526 1564 0.532862 CCGAGGAGCGCATAATTGGT 60.533 55.000 11.47 0.00 39.11 3.67
1527 1565 0.861837 CGAGGAGCGCATAATTGGTC 59.138 55.000 11.47 0.00 0.00 4.02
1528 1566 0.861837 GAGGAGCGCATAATTGGTCG 59.138 55.000 11.47 0.00 33.53 4.79
1529 1567 0.178068 AGGAGCGCATAATTGGTCGT 59.822 50.000 11.47 0.00 33.53 4.34
1530 1568 0.304705 GGAGCGCATAATTGGTCGTG 59.695 55.000 11.47 0.00 33.53 4.35
1531 1569 0.304705 GAGCGCATAATTGGTCGTGG 59.695 55.000 11.47 0.00 0.00 4.94
1532 1570 0.392461 AGCGCATAATTGGTCGTGGT 60.392 50.000 11.47 0.00 0.00 4.16
1533 1571 0.248054 GCGCATAATTGGTCGTGGTG 60.248 55.000 0.30 0.00 0.00 4.17
1534 1572 0.376852 CGCATAATTGGTCGTGGTGG 59.623 55.000 0.00 0.00 0.00 4.61
1535 1573 0.100503 GCATAATTGGTCGTGGTGGC 59.899 55.000 0.00 0.00 0.00 5.01
1536 1574 0.738389 CATAATTGGTCGTGGTGGCC 59.262 55.000 0.00 0.00 0.00 5.36
1537 1575 0.329931 ATAATTGGTCGTGGTGGCCA 59.670 50.000 0.00 0.00 0.00 5.36
1538 1576 0.329931 TAATTGGTCGTGGTGGCCAT 59.670 50.000 9.72 0.00 35.28 4.40
1539 1577 1.250154 AATTGGTCGTGGTGGCCATG 61.250 55.000 9.72 0.00 41.56 3.66
1540 1578 3.859118 TTGGTCGTGGTGGCCATGG 62.859 63.158 9.72 7.63 40.65 3.66
1541 1579 4.028490 GGTCGTGGTGGCCATGGA 62.028 66.667 18.40 0.62 40.65 3.41
1542 1580 2.436646 GTCGTGGTGGCCATGGAG 60.437 66.667 18.40 1.19 40.65 3.86
1543 1581 2.927856 TCGTGGTGGCCATGGAGT 60.928 61.111 18.40 0.00 40.65 3.85
1544 1582 1.610967 TCGTGGTGGCCATGGAGTA 60.611 57.895 18.40 0.00 40.65 2.59
1545 1583 1.153369 CGTGGTGGCCATGGAGTAG 60.153 63.158 18.40 0.00 36.92 2.57
1546 1584 1.899437 CGTGGTGGCCATGGAGTAGT 61.899 60.000 18.40 0.00 36.92 2.73
1547 1585 0.328258 GTGGTGGCCATGGAGTAGTT 59.672 55.000 18.40 0.00 35.28 2.24
1548 1586 1.072266 TGGTGGCCATGGAGTAGTTT 58.928 50.000 18.40 0.00 0.00 2.66
1549 1587 1.427368 TGGTGGCCATGGAGTAGTTTT 59.573 47.619 18.40 0.00 0.00 2.43
1550 1588 2.092323 GGTGGCCATGGAGTAGTTTTC 58.908 52.381 18.40 0.00 0.00 2.29
1551 1589 2.554344 GGTGGCCATGGAGTAGTTTTCA 60.554 50.000 18.40 0.00 0.00 2.69
1552 1590 3.153919 GTGGCCATGGAGTAGTTTTCAA 58.846 45.455 18.40 0.00 0.00 2.69
1553 1591 3.191371 GTGGCCATGGAGTAGTTTTCAAG 59.809 47.826 18.40 0.00 0.00 3.02
1554 1592 2.755103 GGCCATGGAGTAGTTTTCAAGG 59.245 50.000 18.40 0.00 0.00 3.61
1555 1593 3.421844 GCCATGGAGTAGTTTTCAAGGT 58.578 45.455 18.40 0.00 0.00 3.50
1556 1594 4.566907 GGCCATGGAGTAGTTTTCAAGGTA 60.567 45.833 18.40 0.00 0.00 3.08
1557 1595 4.395231 GCCATGGAGTAGTTTTCAAGGTAC 59.605 45.833 18.40 0.00 0.00 3.34
1559 1597 5.643777 CCATGGAGTAGTTTTCAAGGTACTG 59.356 44.000 5.56 0.00 40.86 2.74
1560 1598 5.881923 TGGAGTAGTTTTCAAGGTACTGT 57.118 39.130 0.00 0.00 40.86 3.55
1561 1599 6.982160 TGGAGTAGTTTTCAAGGTACTGTA 57.018 37.500 0.00 0.00 40.86 2.74
1562 1600 6.752168 TGGAGTAGTTTTCAAGGTACTGTAC 58.248 40.000 9.46 9.46 40.86 2.90
1563 1601 5.860716 GGAGTAGTTTTCAAGGTACTGTACG 59.139 44.000 11.52 0.00 40.86 3.67
1564 1602 6.294176 GGAGTAGTTTTCAAGGTACTGTACGA 60.294 42.308 11.52 1.40 40.86 3.43
1565 1603 7.224522 AGTAGTTTTCAAGGTACTGTACGAT 57.775 36.000 11.52 0.59 40.86 3.73
1566 1604 7.664758 AGTAGTTTTCAAGGTACTGTACGATT 58.335 34.615 11.52 6.56 40.86 3.34
1567 1605 8.796475 AGTAGTTTTCAAGGTACTGTACGATTA 58.204 33.333 11.52 0.00 40.86 1.75
1568 1606 7.880059 AGTTTTCAAGGTACTGTACGATTAC 57.120 36.000 11.52 4.99 40.86 1.89
1569 1607 7.664758 AGTTTTCAAGGTACTGTACGATTACT 58.335 34.615 11.52 6.80 40.86 2.24
1570 1608 8.796475 AGTTTTCAAGGTACTGTACGATTACTA 58.204 33.333 11.52 0.00 40.86 1.82
1571 1609 8.854312 GTTTTCAAGGTACTGTACGATTACTAC 58.146 37.037 11.52 2.64 40.86 2.73
1572 1610 7.928307 TTCAAGGTACTGTACGATTACTACT 57.072 36.000 11.52 0.00 40.86 2.57
1573 1611 9.448438 TTTCAAGGTACTGTACGATTACTACTA 57.552 33.333 11.52 0.00 40.86 1.82
1574 1612 8.654230 TCAAGGTACTGTACGATTACTACTAG 57.346 38.462 11.52 0.00 40.86 2.57
1575 1613 7.225538 TCAAGGTACTGTACGATTACTACTAGC 59.774 40.741 11.52 0.00 40.86 3.42
1576 1614 6.586344 AGGTACTGTACGATTACTACTAGCA 58.414 40.000 11.52 0.00 37.18 3.49
1577 1615 7.222872 AGGTACTGTACGATTACTACTAGCAT 58.777 38.462 11.52 0.00 37.18 3.79
1578 1616 8.370940 AGGTACTGTACGATTACTACTAGCATA 58.629 37.037 11.52 0.00 37.18 3.14
1579 1617 9.160496 GGTACTGTACGATTACTACTAGCATAT 57.840 37.037 11.52 0.00 0.00 1.78
1601 1639 9.305925 CATATTTTGCTTTCTATTCCCTTTGTC 57.694 33.333 0.00 0.00 0.00 3.18
1602 1640 5.722021 TTTGCTTTCTATTCCCTTTGTCC 57.278 39.130 0.00 0.00 0.00 4.02
1603 1641 3.697166 TGCTTTCTATTCCCTTTGTCCC 58.303 45.455 0.00 0.00 0.00 4.46
1604 1642 3.075283 TGCTTTCTATTCCCTTTGTCCCA 59.925 43.478 0.00 0.00 0.00 4.37
1605 1643 4.264352 TGCTTTCTATTCCCTTTGTCCCAT 60.264 41.667 0.00 0.00 0.00 4.00
1606 1644 5.044476 TGCTTTCTATTCCCTTTGTCCCATA 60.044 40.000 0.00 0.00 0.00 2.74
1607 1645 5.891551 GCTTTCTATTCCCTTTGTCCCATAA 59.108 40.000 0.00 0.00 0.00 1.90
1608 1646 6.551227 GCTTTCTATTCCCTTTGTCCCATAAT 59.449 38.462 0.00 0.00 0.00 1.28
1609 1647 7.724061 GCTTTCTATTCCCTTTGTCCCATAATA 59.276 37.037 0.00 0.00 0.00 0.98
1610 1648 9.813826 CTTTCTATTCCCTTTGTCCCATAATAT 57.186 33.333 0.00 0.00 0.00 1.28
1617 1655 9.548631 TTCCCTTTGTCCCATAATATAAAAACA 57.451 29.630 0.00 0.00 0.00 2.83
1618 1656 9.722317 TCCCTTTGTCCCATAATATAAAAACAT 57.278 29.630 0.00 0.00 0.00 2.71
1651 1689 9.445786 CATTACACTAATGTCAAAAACGTTCTT 57.554 29.630 0.00 0.00 40.43 2.52
1653 1691 9.919348 TTACACTAATGTCAAAAACGTTCTTAC 57.081 29.630 0.00 0.00 40.48 2.34
1654 1692 8.205131 ACACTAATGTCAAAAACGTTCTTACT 57.795 30.769 0.00 0.00 38.14 2.24
1655 1693 8.333186 ACACTAATGTCAAAAACGTTCTTACTC 58.667 33.333 0.00 0.00 38.14 2.59
1656 1694 8.332464 CACTAATGTCAAAAACGTTCTTACTCA 58.668 33.333 0.00 0.00 38.14 3.41
1657 1695 8.885722 ACTAATGTCAAAAACGTTCTTACTCAA 58.114 29.630 0.00 0.00 38.14 3.02
1658 1696 9.370126 CTAATGTCAAAAACGTTCTTACTCAAG 57.630 33.333 0.00 0.00 38.14 3.02
1659 1697 6.730960 TGTCAAAAACGTTCTTACTCAAGT 57.269 33.333 0.00 0.00 33.20 3.16
1660 1698 7.830940 TGTCAAAAACGTTCTTACTCAAGTA 57.169 32.000 0.00 0.00 33.20 2.24
1661 1699 8.428186 TGTCAAAAACGTTCTTACTCAAGTAT 57.572 30.769 0.00 0.00 33.20 2.12
1662 1700 9.531942 TGTCAAAAACGTTCTTACTCAAGTATA 57.468 29.630 0.00 0.00 33.20 1.47
1692 1730 8.439286 TGAAACACAAAAACATAAAAACAGAGC 58.561 29.630 0.00 0.00 0.00 4.09
1693 1731 7.897575 AACACAAAAACATAAAAACAGAGCA 57.102 28.000 0.00 0.00 0.00 4.26
1694 1732 8.491331 AACACAAAAACATAAAAACAGAGCAT 57.509 26.923 0.00 0.00 0.00 3.79
1695 1733 8.491331 ACACAAAAACATAAAAACAGAGCATT 57.509 26.923 0.00 0.00 0.00 3.56
1696 1734 8.389603 ACACAAAAACATAAAAACAGAGCATTG 58.610 29.630 0.00 0.00 0.00 2.82
1697 1735 8.389603 CACAAAAACATAAAAACAGAGCATTGT 58.610 29.630 0.00 0.00 0.00 2.71
1698 1736 8.945057 ACAAAAACATAAAAACAGAGCATTGTT 58.055 25.926 0.52 0.52 42.82 2.83
1715 1753 1.878088 TGTTTCTCAGACGCGACTAGT 59.122 47.619 15.93 0.00 0.00 2.57
1754 1792 3.453679 GGGGAGCGAGCGTTCTCT 61.454 66.667 6.57 0.00 37.19 3.10
1755 1793 2.103340 GGGAGCGAGCGTTCTCTC 59.897 66.667 10.44 10.44 37.19 3.20
1854 1893 8.612619 CGTTATATATCCCACCTGCATTTATTC 58.387 37.037 0.00 0.00 0.00 1.75
1870 1909 8.156165 TGCATTTATTCTGGGATCAAAAACTTT 58.844 29.630 0.00 0.00 0.00 2.66
2045 2126 4.013728 GACTACCTATGAGCGGATGATCT 58.986 47.826 0.00 0.00 0.00 2.75
2196 2287 5.354234 ACCAATGACGGTCATCTAATTTGTC 59.646 40.000 22.85 0.00 35.76 3.18
2198 2289 4.545208 TGACGGTCATCTAATTTGTCCA 57.455 40.909 6.76 0.00 0.00 4.02
2206 2297 7.094975 CGGTCATCTAATTTGTCCAAACAAGTA 60.095 37.037 0.00 0.00 45.72 2.24
2348 2446 1.766496 CTCCTAATTAAGGTCCCCGCA 59.234 52.381 0.00 0.00 46.62 5.69
2386 2484 5.824624 CCACACTACAAATGGAGATGCTAAT 59.175 40.000 0.00 0.00 35.33 1.73
2453 2551 2.146342 CTCCTGAGCAAACACGATGTT 58.854 47.619 0.00 0.00 43.41 2.71
2456 2554 2.349817 CCTGAGCAAACACGATGTTCAC 60.350 50.000 0.00 0.00 40.14 3.18
2472 2570 0.457853 TCACAACTAGATGACGCGCC 60.458 55.000 5.73 0.00 0.00 6.53
2477 2575 1.592669 CTAGATGACGCGCCAAGGG 60.593 63.158 5.73 0.00 38.93 3.95
2510 2608 0.890683 CCACTGAGCCAACCATTTCC 59.109 55.000 0.00 0.00 0.00 3.13
2515 2613 0.388520 GAGCCAACCATTTCCGTTGC 60.389 55.000 0.00 0.00 39.42 4.17
2518 2616 1.607767 GCCAACCATTTCCGTTGCAAT 60.608 47.619 0.59 0.00 39.42 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 6.431234 ACATATACTATAGCCCAGCAAAAAGC 59.569 38.462 0.00 0.00 46.19 3.51
22 23 7.986085 ACATATACTATAGCCCAGCAAAAAG 57.014 36.000 0.00 0.00 0.00 2.27
39 40 9.698309 GGCACATGATGGAGTATATACATATAC 57.302 37.037 15.18 10.23 43.34 1.47
40 41 8.870116 GGGCACATGATGGAGTATATACATATA 58.130 37.037 15.18 0.00 0.00 0.86
41 42 7.202130 GGGGCACATGATGGAGTATATACATAT 60.202 40.741 15.18 6.04 0.00 1.78
42 43 6.099701 GGGGCACATGATGGAGTATATACATA 59.900 42.308 15.18 1.43 0.00 2.29
43 44 5.104360 GGGGCACATGATGGAGTATATACAT 60.104 44.000 15.18 0.02 0.00 2.29
44 45 4.225042 GGGGCACATGATGGAGTATATACA 59.775 45.833 15.18 0.00 0.00 2.29
45 46 4.384208 GGGGGCACATGATGGAGTATATAC 60.384 50.000 4.60 4.60 0.00 1.47
46 47 3.780294 GGGGGCACATGATGGAGTATATA 59.220 47.826 0.00 0.00 0.00 0.86
47 48 2.578021 GGGGGCACATGATGGAGTATAT 59.422 50.000 0.00 0.00 0.00 0.86
48 49 1.985159 GGGGGCACATGATGGAGTATA 59.015 52.381 0.00 0.00 0.00 1.47
49 50 0.773644 GGGGGCACATGATGGAGTAT 59.226 55.000 0.00 0.00 0.00 2.12
50 51 2.230664 GGGGGCACATGATGGAGTA 58.769 57.895 0.00 0.00 0.00 2.59
51 52 3.010144 GGGGGCACATGATGGAGT 58.990 61.111 0.00 0.00 0.00 3.85
117 118 3.049080 ATTCTTCTCAGGGCCGGCC 62.049 63.158 38.57 38.57 0.00 6.13
118 119 1.821332 CATTCTTCTCAGGGCCGGC 60.821 63.158 21.18 21.18 0.00 6.13
119 120 1.153086 CCATTCTTCTCAGGGCCGG 60.153 63.158 0.00 0.00 0.00 6.13
120 121 1.153086 CCCATTCTTCTCAGGGCCG 60.153 63.158 0.00 0.00 33.91 6.13
121 122 1.228510 CCCCATTCTTCTCAGGGCC 59.771 63.158 0.00 0.00 40.07 5.80
122 123 1.228510 CCCCCATTCTTCTCAGGGC 59.771 63.158 0.00 0.00 40.07 5.19
123 124 0.257039 CACCCCCATTCTTCTCAGGG 59.743 60.000 0.00 0.00 41.12 4.45
124 125 0.257039 CCACCCCCATTCTTCTCAGG 59.743 60.000 0.00 0.00 0.00 3.86
125 126 0.257039 CCCACCCCCATTCTTCTCAG 59.743 60.000 0.00 0.00 0.00 3.35
126 127 0.477597 ACCCACCCCCATTCTTCTCA 60.478 55.000 0.00 0.00 0.00 3.27
127 128 1.212195 GTACCCACCCCCATTCTTCTC 59.788 57.143 0.00 0.00 0.00 2.87
128 129 1.296002 GTACCCACCCCCATTCTTCT 58.704 55.000 0.00 0.00 0.00 2.85
129 130 0.996583 TGTACCCACCCCCATTCTTC 59.003 55.000 0.00 0.00 0.00 2.87
130 131 0.999712 CTGTACCCACCCCCATTCTT 59.000 55.000 0.00 0.00 0.00 2.52
131 132 0.120377 TCTGTACCCACCCCCATTCT 59.880 55.000 0.00 0.00 0.00 2.40
132 133 0.996583 TTCTGTACCCACCCCCATTC 59.003 55.000 0.00 0.00 0.00 2.67
133 134 0.702316 GTTCTGTACCCACCCCCATT 59.298 55.000 0.00 0.00 0.00 3.16
134 135 0.178843 AGTTCTGTACCCACCCCCAT 60.179 55.000 0.00 0.00 0.00 4.00
135 136 0.402272 AAGTTCTGTACCCACCCCCA 60.402 55.000 0.00 0.00 0.00 4.96
136 137 1.558294 CTAAGTTCTGTACCCACCCCC 59.442 57.143 0.00 0.00 0.00 5.40
137 138 2.543635 TCTAAGTTCTGTACCCACCCC 58.456 52.381 0.00 0.00 0.00 4.95
138 139 4.961099 AGTATCTAAGTTCTGTACCCACCC 59.039 45.833 0.00 0.00 0.00 4.61
139 140 5.068855 GGAGTATCTAAGTTCTGTACCCACC 59.931 48.000 0.00 0.00 33.73 4.61
140 141 5.655532 TGGAGTATCTAAGTTCTGTACCCAC 59.344 44.000 0.00 0.00 33.73 4.61
141 142 5.655532 GTGGAGTATCTAAGTTCTGTACCCA 59.344 44.000 0.00 0.00 33.73 4.51
142 143 5.221009 CGTGGAGTATCTAAGTTCTGTACCC 60.221 48.000 0.00 0.00 33.73 3.69
143 144 5.221009 CCGTGGAGTATCTAAGTTCTGTACC 60.221 48.000 0.00 0.00 33.73 3.34
144 145 5.587844 TCCGTGGAGTATCTAAGTTCTGTAC 59.412 44.000 0.00 0.00 33.73 2.90
145 146 5.748402 TCCGTGGAGTATCTAAGTTCTGTA 58.252 41.667 0.00 0.00 33.73 2.74
146 147 4.597004 TCCGTGGAGTATCTAAGTTCTGT 58.403 43.478 0.00 0.00 33.73 3.41
147 148 5.578005 TTCCGTGGAGTATCTAAGTTCTG 57.422 43.478 0.00 0.00 33.73 3.02
148 149 5.479375 TGTTTCCGTGGAGTATCTAAGTTCT 59.521 40.000 0.00 0.00 33.73 3.01
149 150 5.717119 TGTTTCCGTGGAGTATCTAAGTTC 58.283 41.667 0.00 0.00 33.73 3.01
150 151 5.733620 TGTTTCCGTGGAGTATCTAAGTT 57.266 39.130 0.00 0.00 33.73 2.66
151 152 5.245526 ACTTGTTTCCGTGGAGTATCTAAGT 59.754 40.000 0.00 0.00 33.73 2.24
152 153 5.721232 ACTTGTTTCCGTGGAGTATCTAAG 58.279 41.667 0.00 0.00 33.73 2.18
153 154 5.479375 AGACTTGTTTCCGTGGAGTATCTAA 59.521 40.000 0.00 0.00 33.73 2.10
154 155 5.014858 AGACTTGTTTCCGTGGAGTATCTA 58.985 41.667 0.00 0.00 33.73 1.98
155 156 3.833070 AGACTTGTTTCCGTGGAGTATCT 59.167 43.478 0.00 0.00 33.73 1.98
156 157 3.927142 CAGACTTGTTTCCGTGGAGTATC 59.073 47.826 0.00 0.00 0.00 2.24
157 158 3.306780 CCAGACTTGTTTCCGTGGAGTAT 60.307 47.826 0.00 0.00 0.00 2.12
158 159 2.036733 CCAGACTTGTTTCCGTGGAGTA 59.963 50.000 0.00 0.00 0.00 2.59
159 160 1.202651 CCAGACTTGTTTCCGTGGAGT 60.203 52.381 0.00 0.00 0.00 3.85
160 161 1.202651 ACCAGACTTGTTTCCGTGGAG 60.203 52.381 0.00 0.00 0.00 3.86
161 162 0.834612 ACCAGACTTGTTTCCGTGGA 59.165 50.000 0.00 0.00 0.00 4.02
162 163 0.944386 CACCAGACTTGTTTCCGTGG 59.056 55.000 0.00 0.00 0.00 4.94
163 164 1.330521 CACACCAGACTTGTTTCCGTG 59.669 52.381 0.00 0.00 0.00 4.94
164 165 1.663695 CACACCAGACTTGTTTCCGT 58.336 50.000 0.00 0.00 0.00 4.69
165 166 0.944386 CCACACCAGACTTGTTTCCG 59.056 55.000 0.00 0.00 0.00 4.30
166 167 1.947456 GACCACACCAGACTTGTTTCC 59.053 52.381 0.00 0.00 0.00 3.13
167 168 2.872858 GAGACCACACCAGACTTGTTTC 59.127 50.000 0.00 0.00 0.00 2.78
168 169 2.741878 CGAGACCACACCAGACTTGTTT 60.742 50.000 0.00 0.00 0.00 2.83
169 170 1.202533 CGAGACCACACCAGACTTGTT 60.203 52.381 0.00 0.00 0.00 2.83
170 171 0.389391 CGAGACCACACCAGACTTGT 59.611 55.000 0.00 0.00 0.00 3.16
171 172 0.319900 CCGAGACCACACCAGACTTG 60.320 60.000 0.00 0.00 0.00 3.16
172 173 0.759436 ACCGAGACCACACCAGACTT 60.759 55.000 0.00 0.00 0.00 3.01
173 174 0.111832 TACCGAGACCACACCAGACT 59.888 55.000 0.00 0.00 0.00 3.24
174 175 1.183549 ATACCGAGACCACACCAGAC 58.816 55.000 0.00 0.00 0.00 3.51
175 176 1.933021 AATACCGAGACCACACCAGA 58.067 50.000 0.00 0.00 0.00 3.86
176 177 2.346803 CAAATACCGAGACCACACCAG 58.653 52.381 0.00 0.00 0.00 4.00
177 178 1.609580 GCAAATACCGAGACCACACCA 60.610 52.381 0.00 0.00 0.00 4.17
178 179 1.084289 GCAAATACCGAGACCACACC 58.916 55.000 0.00 0.00 0.00 4.16
179 180 1.084289 GGCAAATACCGAGACCACAC 58.916 55.000 0.00 0.00 0.00 3.82
180 181 3.543884 GGCAAATACCGAGACCACA 57.456 52.632 0.00 0.00 0.00 4.17
191 192 3.003230 CCCTCCCACCGGCAAATA 58.997 61.111 0.00 0.00 0.00 1.40
192 193 4.759205 GCCCTCCCACCGGCAAAT 62.759 66.667 0.00 0.00 45.01 2.32
233 234 3.824443 CAGGACCGAAACCCTAACAAAAT 59.176 43.478 0.00 0.00 0.00 1.82
248 249 3.068691 TCTTCCCGAGCAGGACCG 61.069 66.667 0.00 0.00 45.00 4.79
249 250 1.827399 TTGTCTTCCCGAGCAGGACC 61.827 60.000 0.00 0.00 45.00 4.46
259 261 2.434359 CCGCCGTCTTGTCTTCCC 60.434 66.667 0.00 0.00 0.00 3.97
267 269 3.819877 AAGAAACCGCCGCCGTCTT 62.820 57.895 0.00 0.00 0.00 3.01
289 291 3.503748 GGCGGGGAGAATCTTATTTCATG 59.496 47.826 0.00 0.00 33.73 3.07
347 349 1.069765 CACACCTCCACACGCTCTT 59.930 57.895 0.00 0.00 0.00 2.85
367 369 2.502492 CCCGTGAGATCCGCCAGAT 61.502 63.158 0.00 0.00 38.17 2.90
404 406 3.657398 TGATCCAAGCAGATCACCAAT 57.343 42.857 9.32 0.00 45.98 3.16
424 427 8.017373 CACATGAACAAAGACGAATAAAGACAT 58.983 33.333 0.00 0.00 0.00 3.06
425 428 7.011950 ACACATGAACAAAGACGAATAAAGACA 59.988 33.333 0.00 0.00 0.00 3.41
495 498 0.870393 CGCATCAGAACAGCAACAGT 59.130 50.000 0.00 0.00 0.00 3.55
561 567 3.300711 CGGAGTCGGGAACAACTTT 57.699 52.632 0.00 0.00 0.00 2.66
622 629 1.630148 AGCGACGACTACAAGCATTC 58.370 50.000 0.00 0.00 0.00 2.67
624 631 1.065701 CCTAGCGACGACTACAAGCAT 59.934 52.381 0.00 0.00 0.00 3.79
689 696 9.662947 TCTATTCATCTTATCATGGCAATACAG 57.337 33.333 0.00 0.00 0.00 2.74
717 726 3.003480 CGAATCAGACCAGAAACTTCCC 58.997 50.000 0.00 0.00 0.00 3.97
728 737 1.659098 CGTTGTTAGCCGAATCAGACC 59.341 52.381 0.00 0.00 0.00 3.85
729 738 1.659098 CCGTTGTTAGCCGAATCAGAC 59.341 52.381 0.00 0.00 0.00 3.51
730 739 1.546923 TCCGTTGTTAGCCGAATCAGA 59.453 47.619 0.00 0.00 0.00 3.27
731 740 1.659098 GTCCGTTGTTAGCCGAATCAG 59.341 52.381 0.00 0.00 0.00 2.90
732 741 1.673626 GGTCCGTTGTTAGCCGAATCA 60.674 52.381 0.00 0.00 0.00 2.57
733 742 1.004595 GGTCCGTTGTTAGCCGAATC 58.995 55.000 0.00 0.00 0.00 2.52
734 743 0.392060 GGGTCCGTTGTTAGCCGAAT 60.392 55.000 0.00 0.00 0.00 3.34
735 744 1.004679 GGGTCCGTTGTTAGCCGAA 60.005 57.895 0.00 0.00 0.00 4.30
736 745 2.658422 GGGTCCGTTGTTAGCCGA 59.342 61.111 0.00 0.00 0.00 5.54
737 746 2.435410 GGGGTCCGTTGTTAGCCG 60.435 66.667 0.00 0.00 33.97 5.52
738 747 1.673337 GTGGGGTCCGTTGTTAGCC 60.673 63.158 0.00 0.00 0.00 3.93
739 748 0.953960 CTGTGGGGTCCGTTGTTAGC 60.954 60.000 0.00 0.00 0.00 3.09
740 749 0.395312 ACTGTGGGGTCCGTTGTTAG 59.605 55.000 0.00 0.00 0.00 2.34
741 750 1.714541 TACTGTGGGGTCCGTTGTTA 58.285 50.000 0.00 0.00 0.00 2.41
742 751 1.061546 ATACTGTGGGGTCCGTTGTT 58.938 50.000 0.00 0.00 0.00 2.83
743 752 0.323629 CATACTGTGGGGTCCGTTGT 59.676 55.000 0.00 0.00 0.00 3.32
744 753 0.611200 TCATACTGTGGGGTCCGTTG 59.389 55.000 0.00 0.00 0.00 4.10
745 754 0.902531 CTCATACTGTGGGGTCCGTT 59.097 55.000 0.00 0.00 0.00 4.44
746 755 0.252103 ACTCATACTGTGGGGTCCGT 60.252 55.000 0.00 0.00 30.22 4.69
747 756 0.175760 CACTCATACTGTGGGGTCCG 59.824 60.000 0.00 0.00 30.22 4.79
748 757 1.066143 CACACTCATACTGTGGGGTCC 60.066 57.143 0.00 0.00 39.52 4.46
749 758 1.676014 GCACACTCATACTGTGGGGTC 60.676 57.143 0.00 0.00 39.62 4.46
750 759 0.324943 GCACACTCATACTGTGGGGT 59.675 55.000 0.00 0.00 39.62 4.95
751 760 0.740868 CGCACACTCATACTGTGGGG 60.741 60.000 7.51 0.00 44.67 4.96
752 761 2.754648 CGCACACTCATACTGTGGG 58.245 57.895 1.78 1.78 43.55 4.61
753 762 1.633561 CTCGCACACTCATACTGTGG 58.366 55.000 1.03 0.00 39.62 4.17
754 763 1.633561 CCTCGCACACTCATACTGTG 58.366 55.000 0.00 0.00 41.76 3.66
755 764 0.532573 CCCTCGCACACTCATACTGT 59.467 55.000 0.00 0.00 0.00 3.55
756 765 0.807667 GCCCTCGCACACTCATACTG 60.808 60.000 0.00 0.00 34.03 2.74
757 766 1.257750 TGCCCTCGCACACTCATACT 61.258 55.000 0.00 0.00 41.12 2.12
758 767 1.218047 TGCCCTCGCACACTCATAC 59.782 57.895 0.00 0.00 41.12 2.39
759 768 3.706855 TGCCCTCGCACACTCATA 58.293 55.556 0.00 0.00 41.12 2.15
767 776 2.594303 CTGTGGTTTGCCCTCGCA 60.594 61.111 0.00 0.00 45.49 5.10
768 777 4.043200 GCTGTGGTTTGCCCTCGC 62.043 66.667 0.00 0.00 0.00 5.03
769 778 3.726517 CGCTGTGGTTTGCCCTCG 61.727 66.667 0.00 0.00 0.00 4.63
770 779 4.043200 GCGCTGTGGTTTGCCCTC 62.043 66.667 0.00 0.00 0.00 4.30
771 780 4.892965 TGCGCTGTGGTTTGCCCT 62.893 61.111 9.73 0.00 0.00 5.19
772 781 4.347453 CTGCGCTGTGGTTTGCCC 62.347 66.667 9.73 0.00 0.00 5.36
774 783 4.268939 TGCTGCGCTGTGGTTTGC 62.269 61.111 16.05 4.55 0.00 3.68
775 784 1.859427 ATCTGCTGCGCTGTGGTTTG 61.859 55.000 16.05 1.00 0.00 2.93
776 785 1.601759 ATCTGCTGCGCTGTGGTTT 60.602 52.632 16.05 0.00 0.00 3.27
777 786 2.033141 ATCTGCTGCGCTGTGGTT 59.967 55.556 16.05 1.97 0.00 3.67
778 787 2.745100 CATCTGCTGCGCTGTGGT 60.745 61.111 16.05 2.95 0.00 4.16
779 788 3.506096 CCATCTGCTGCGCTGTGG 61.506 66.667 16.05 11.25 0.00 4.17
780 789 3.506096 CCCATCTGCTGCGCTGTG 61.506 66.667 16.05 9.27 0.00 3.66
781 790 3.677284 CTCCCATCTGCTGCGCTGT 62.677 63.158 16.05 0.00 0.00 4.40
782 791 2.661840 ATCTCCCATCTGCTGCGCTG 62.662 60.000 9.73 10.04 0.00 5.18
783 792 1.117749 TATCTCCCATCTGCTGCGCT 61.118 55.000 9.73 0.00 0.00 5.92
784 793 0.669932 CTATCTCCCATCTGCTGCGC 60.670 60.000 0.00 0.00 0.00 6.09
785 794 0.669932 GCTATCTCCCATCTGCTGCG 60.670 60.000 0.00 0.00 0.00 5.18
786 795 0.669932 CGCTATCTCCCATCTGCTGC 60.670 60.000 0.00 0.00 0.00 5.25
787 796 0.964700 TCGCTATCTCCCATCTGCTG 59.035 55.000 0.00 0.00 0.00 4.41
788 797 1.549620 CATCGCTATCTCCCATCTGCT 59.450 52.381 0.00 0.00 0.00 4.24
789 798 1.274728 ACATCGCTATCTCCCATCTGC 59.725 52.381 0.00 0.00 0.00 4.26
790 799 2.560105 TGACATCGCTATCTCCCATCTG 59.440 50.000 0.00 0.00 0.00 2.90
791 800 2.560542 GTGACATCGCTATCTCCCATCT 59.439 50.000 0.00 0.00 0.00 2.90
792 801 2.669670 CGTGACATCGCTATCTCCCATC 60.670 54.545 0.00 0.00 0.00 3.51
793 802 1.270826 CGTGACATCGCTATCTCCCAT 59.729 52.381 0.00 0.00 0.00 4.00
794 803 0.668535 CGTGACATCGCTATCTCCCA 59.331 55.000 0.00 0.00 0.00 4.37
795 804 0.039074 CCGTGACATCGCTATCTCCC 60.039 60.000 0.00 0.00 0.00 4.30
796 805 0.664767 GCCGTGACATCGCTATCTCC 60.665 60.000 0.00 0.00 0.00 3.71
797 806 0.664767 GGCCGTGACATCGCTATCTC 60.665 60.000 0.00 0.00 0.00 2.75
798 807 1.364171 GGCCGTGACATCGCTATCT 59.636 57.895 0.00 0.00 0.00 1.98
799 808 1.067416 TGGCCGTGACATCGCTATC 59.933 57.895 0.00 0.00 0.00 2.08
800 809 1.227263 GTGGCCGTGACATCGCTAT 60.227 57.895 0.00 0.00 0.00 2.97
801 810 2.183300 GTGGCCGTGACATCGCTA 59.817 61.111 0.00 0.00 0.00 4.26
802 811 4.760047 GGTGGCCGTGACATCGCT 62.760 66.667 0.00 0.00 0.00 4.93
804 813 2.358125 TTGGTGGCCGTGACATCG 60.358 61.111 0.00 0.00 0.00 3.84
805 814 0.392998 ATCTTGGTGGCCGTGACATC 60.393 55.000 0.00 0.00 0.00 3.06
806 815 0.908910 TATCTTGGTGGCCGTGACAT 59.091 50.000 0.00 0.00 0.00 3.06
807 816 0.908910 ATATCTTGGTGGCCGTGACA 59.091 50.000 0.00 0.00 0.00 3.58
818 827 8.339714 CAATTATTGGCAAGCAAAATATCTTGG 58.660 33.333 5.96 0.00 39.87 3.61
830 839 4.082026 ACAAGGAGTCAATTATTGGCAAGC 60.082 41.667 12.26 0.96 37.85 4.01
831 840 5.649782 ACAAGGAGTCAATTATTGGCAAG 57.350 39.130 12.26 0.00 37.85 4.01
833 842 5.815581 AGTACAAGGAGTCAATTATTGGCA 58.184 37.500 12.26 0.00 37.85 4.92
853 862 4.081254 TGCTCGACTGGAAGAGTACTAGTA 60.081 45.833 0.00 0.00 37.43 1.82
854 863 3.272581 GCTCGACTGGAAGAGTACTAGT 58.727 50.000 0.00 0.00 37.43 2.57
855 864 3.271729 TGCTCGACTGGAAGAGTACTAG 58.728 50.000 0.00 0.00 37.43 2.57
860 869 0.251386 TCCTGCTCGACTGGAAGAGT 60.251 55.000 9.89 0.00 42.93 3.24
892 904 1.309950 TAGATCTGAGTCGGCCGAAG 58.690 55.000 32.93 24.17 0.00 3.79
912 924 3.395941 AGAGAGGAAAGGAGAAGGCAAAA 59.604 43.478 0.00 0.00 0.00 2.44
917 929 3.954258 GAGAGAGAGAGGAAAGGAGAAGG 59.046 52.174 0.00 0.00 0.00 3.46
919 931 4.540099 AGAGAGAGAGAGAGGAAAGGAGAA 59.460 45.833 0.00 0.00 0.00 2.87
921 933 4.164988 AGAGAGAGAGAGAGAGGAAAGGAG 59.835 50.000 0.00 0.00 0.00 3.69
922 934 4.111577 AGAGAGAGAGAGAGAGGAAAGGA 58.888 47.826 0.00 0.00 0.00 3.36
958 971 5.141182 GGTAGAGAGAGAGAGAGAGAGAGA 58.859 50.000 0.00 0.00 0.00 3.10
959 972 4.282195 GGGTAGAGAGAGAGAGAGAGAGAG 59.718 54.167 0.00 0.00 0.00 3.20
960 973 4.223953 GGGTAGAGAGAGAGAGAGAGAGA 58.776 52.174 0.00 0.00 0.00 3.10
961 974 3.325135 GGGGTAGAGAGAGAGAGAGAGAG 59.675 56.522 0.00 0.00 0.00 3.20
962 975 3.314693 GGGGTAGAGAGAGAGAGAGAGA 58.685 54.545 0.00 0.00 0.00 3.10
963 976 2.372172 GGGGGTAGAGAGAGAGAGAGAG 59.628 59.091 0.00 0.00 0.00 3.20
964 977 2.414612 GGGGGTAGAGAGAGAGAGAGA 58.585 57.143 0.00 0.00 0.00 3.10
965 978 1.071699 CGGGGGTAGAGAGAGAGAGAG 59.928 61.905 0.00 0.00 0.00 3.20
966 979 1.133363 CGGGGGTAGAGAGAGAGAGA 58.867 60.000 0.00 0.00 0.00 3.10
967 980 0.841289 ACGGGGGTAGAGAGAGAGAG 59.159 60.000 0.00 0.00 0.00 3.20
968 981 1.064611 CAACGGGGGTAGAGAGAGAGA 60.065 57.143 0.00 0.00 0.00 3.10
969 982 1.394618 CAACGGGGGTAGAGAGAGAG 58.605 60.000 0.00 0.00 0.00 3.20
970 983 0.033405 CCAACGGGGGTAGAGAGAGA 60.033 60.000 0.00 0.00 0.00 3.10
971 984 1.677637 GCCAACGGGGGTAGAGAGAG 61.678 65.000 0.00 0.00 37.04 3.20
984 997 1.666888 GCCATCAAGTCAAAGCCAACG 60.667 52.381 0.00 0.00 0.00 4.10
985 998 1.615392 AGCCATCAAGTCAAAGCCAAC 59.385 47.619 0.00 0.00 0.00 3.77
987 1000 1.250328 CAGCCATCAAGTCAAAGCCA 58.750 50.000 0.00 0.00 0.00 4.75
989 1002 0.108945 GGCAGCCATCAAGTCAAAGC 60.109 55.000 6.55 0.00 0.00 3.51
990 1003 1.201647 CTGGCAGCCATCAAGTCAAAG 59.798 52.381 16.64 0.00 30.82 2.77
991 1004 1.250328 CTGGCAGCCATCAAGTCAAA 58.750 50.000 16.64 0.00 30.82 2.69
1026 1039 5.766670 ACAAATGAATCAGCAAGAGTTCTCA 59.233 36.000 2.64 0.00 0.00 3.27
1027 1040 6.251655 ACAAATGAATCAGCAAGAGTTCTC 57.748 37.500 0.00 0.00 0.00 2.87
1029 1042 7.138692 ACTACAAATGAATCAGCAAGAGTTC 57.861 36.000 0.00 0.00 0.00 3.01
1050 1063 2.304470 TCTACAGGGCATGCAACAACTA 59.696 45.455 21.36 0.00 0.00 2.24
1067 1080 1.336125 GGCCTGCAAATCAGCATCTAC 59.664 52.381 0.00 0.00 44.68 2.59
1106 1128 4.836825 TGCAATCCTTCCTTAGAGAACAG 58.163 43.478 0.00 0.00 0.00 3.16
1131 1153 5.049818 AGAGAACAAAACGAGATGAGCAAAG 60.050 40.000 0.00 0.00 0.00 2.77
1168 1190 1.276421 CCTCAACCTTCACCACGATCT 59.724 52.381 0.00 0.00 0.00 2.75
1169 1191 1.002087 ACCTCAACCTTCACCACGATC 59.998 52.381 0.00 0.00 0.00 3.69
1170 1192 1.056660 ACCTCAACCTTCACCACGAT 58.943 50.000 0.00 0.00 0.00 3.73
1184 1206 0.037734 TCTGGCTGTCGTCTACCTCA 59.962 55.000 0.00 0.00 0.00 3.86
1188 1210 0.179150 CTGCTCTGGCTGTCGTCTAC 60.179 60.000 0.00 0.00 39.59 2.59
1192 1214 2.164865 CTTCCTGCTCTGGCTGTCGT 62.165 60.000 0.00 0.00 39.59 4.34
1193 1215 1.447489 CTTCCTGCTCTGGCTGTCG 60.447 63.158 0.00 0.00 39.59 4.35
1197 1219 4.093291 CGCCTTCCTGCTCTGGCT 62.093 66.667 0.00 0.00 42.90 4.75
1198 1220 3.397613 ATCGCCTTCCTGCTCTGGC 62.398 63.158 0.00 0.00 41.76 4.85
1201 1223 0.615331 TTTGATCGCCTTCCTGCTCT 59.385 50.000 0.00 0.00 0.00 4.09
1203 1225 1.028868 GCTTTGATCGCCTTCCTGCT 61.029 55.000 0.00 0.00 0.00 4.24
1204 1226 1.308069 TGCTTTGATCGCCTTCCTGC 61.308 55.000 0.00 0.00 0.00 4.85
1205 1227 0.449388 GTGCTTTGATCGCCTTCCTG 59.551 55.000 0.00 0.00 0.00 3.86
1207 1229 0.729690 GAGTGCTTTGATCGCCTTCC 59.270 55.000 0.00 0.00 0.00 3.46
1215 1240 3.380004 CGGAGAGTAGAGAGTGCTTTGAT 59.620 47.826 0.00 0.00 0.00 2.57
1224 1249 3.547054 AGTACCACGGAGAGTAGAGAG 57.453 52.381 0.00 0.00 0.00 3.20
1229 1254 5.046304 AGTTGTAGTAGTACCACGGAGAGTA 60.046 44.000 5.26 0.00 31.46 2.59
1230 1255 3.988976 TGTAGTAGTACCACGGAGAGT 57.011 47.619 5.26 0.00 0.00 3.24
1237 1262 7.451501 AGAAGAGAAGTTGTAGTAGTACCAC 57.548 40.000 5.26 4.68 0.00 4.16
1250 1287 7.468141 AACAAAACTGGAAAGAAGAGAAGTT 57.532 32.000 0.00 0.00 0.00 2.66
1253 1290 7.040062 TCACAAACAAAACTGGAAAGAAGAGAA 60.040 33.333 0.00 0.00 0.00 2.87
1284 1321 2.536130 CGTTGTTGTCCACGTCAGAAAC 60.536 50.000 0.00 0.00 0.00 2.78
1289 1327 1.558741 GTACGTTGTTGTCCACGTCA 58.441 50.000 0.00 0.00 39.61 4.35
1293 1331 1.834458 GCCCGTACGTTGTTGTCCAC 61.834 60.000 15.21 0.00 0.00 4.02
1296 1334 1.287041 GAGGCCCGTACGTTGTTGTC 61.287 60.000 15.21 0.00 0.00 3.18
1300 1338 2.654877 CTGAGGCCCGTACGTTGT 59.345 61.111 15.21 0.00 0.00 3.32
1325 1363 3.607078 GCTTCGTGTTCACAGAAATCACC 60.607 47.826 3.87 0.00 0.00 4.02
1326 1364 3.002246 TGCTTCGTGTTCACAGAAATCAC 59.998 43.478 3.87 0.00 0.00 3.06
1327 1365 3.202097 TGCTTCGTGTTCACAGAAATCA 58.798 40.909 3.87 6.13 0.00 2.57
1332 1370 1.511850 CCATGCTTCGTGTTCACAGA 58.488 50.000 3.87 0.00 0.00 3.41
1333 1371 0.518636 CCCATGCTTCGTGTTCACAG 59.481 55.000 3.87 0.00 0.00 3.66
1338 1376 2.290260 TGATCTTCCCATGCTTCGTGTT 60.290 45.455 0.00 0.00 0.00 3.32
1342 1380 0.933097 CGTGATCTTCCCATGCTTCG 59.067 55.000 0.00 0.00 0.00 3.79
1343 1381 1.303309 CCGTGATCTTCCCATGCTTC 58.697 55.000 0.00 0.00 0.00 3.86
1347 1385 0.175760 ACGACCGTGATCTTCCCATG 59.824 55.000 0.00 0.00 0.00 3.66
1371 1409 0.037046 ACATCGACGGGGTTAACCAC 60.037 55.000 25.71 21.91 42.91 4.16
1372 1410 0.247185 GACATCGACGGGGTTAACCA 59.753 55.000 25.71 4.72 42.91 3.67
1373 1411 0.460811 GGACATCGACGGGGTTAACC 60.461 60.000 16.85 16.85 39.11 2.85
1376 1414 1.324740 CCAGGACATCGACGGGGTTA 61.325 60.000 0.00 0.00 0.00 2.85
1377 1415 2.656069 CCAGGACATCGACGGGGTT 61.656 63.158 0.00 0.00 0.00 4.11
1399 1437 0.668535 AAACAACTTCTTCCGCAGCC 59.331 50.000 0.00 0.00 0.00 4.85
1406 1444 2.287103 AGCGTTCGGAAACAACTTCTTC 59.713 45.455 0.00 0.00 34.93 2.87
1408 1446 1.597663 CAGCGTTCGGAAACAACTTCT 59.402 47.619 0.00 0.00 34.93 2.85
1409 1447 1.595794 TCAGCGTTCGGAAACAACTTC 59.404 47.619 0.00 0.00 34.93 3.01
1410 1448 1.597663 CTCAGCGTTCGGAAACAACTT 59.402 47.619 0.00 0.00 34.93 2.66
1411 1449 1.202486 TCTCAGCGTTCGGAAACAACT 60.202 47.619 0.00 0.00 34.93 3.16
1414 1452 1.710013 GATCTCAGCGTTCGGAAACA 58.290 50.000 0.00 0.00 34.93 2.83
1419 1457 1.934956 CGACGATCTCAGCGTTCGG 60.935 63.158 0.00 0.00 42.77 4.30
1440 1478 2.105128 CTCCATGACGGGCTCGAC 59.895 66.667 15.95 7.47 40.11 4.20
1449 1487 4.624024 TGTAATTTCGTTCGTCTCCATGAC 59.376 41.667 0.00 0.00 42.06 3.06
1450 1488 4.811908 TGTAATTTCGTTCGTCTCCATGA 58.188 39.130 0.00 0.00 0.00 3.07
1453 1491 4.794762 CGTATGTAATTTCGTTCGTCTCCA 59.205 41.667 0.00 0.00 0.00 3.86
1458 1496 6.088824 AGAACTCGTATGTAATTTCGTTCGT 58.911 36.000 3.89 0.00 0.00 3.85
1461 1499 7.878477 TCAAGAACTCGTATGTAATTTCGTT 57.122 32.000 0.00 0.00 0.00 3.85
1466 1504 9.832445 ATATGGTTCAAGAACTCGTATGTAATT 57.168 29.630 12.22 0.00 40.94 1.40
1467 1505 9.477484 GATATGGTTCAAGAACTCGTATGTAAT 57.523 33.333 12.22 0.00 40.94 1.89
1474 1512 5.147330 TGTGATATGGTTCAAGAACTCGT 57.853 39.130 12.22 7.02 40.94 4.18
1475 1513 6.073276 TGTTTGTGATATGGTTCAAGAACTCG 60.073 38.462 12.22 0.00 40.94 4.18
1476 1514 7.202016 TGTTTGTGATATGGTTCAAGAACTC 57.798 36.000 12.22 3.51 40.94 3.01
1477 1515 7.581213 TTGTTTGTGATATGGTTCAAGAACT 57.419 32.000 12.22 0.00 40.94 3.01
1478 1516 8.816640 AATTGTTTGTGATATGGTTCAAGAAC 57.183 30.769 4.39 4.39 40.45 3.01
1479 1517 9.474920 GAAATTGTTTGTGATATGGTTCAAGAA 57.525 29.630 0.00 0.00 0.00 2.52
1480 1518 8.859090 AGAAATTGTTTGTGATATGGTTCAAGA 58.141 29.630 0.00 0.00 0.00 3.02
1481 1519 9.132521 GAGAAATTGTTTGTGATATGGTTCAAG 57.867 33.333 0.00 0.00 0.00 3.02
1482 1520 8.087750 GGAGAAATTGTTTGTGATATGGTTCAA 58.912 33.333 0.00 0.00 0.00 2.69
1483 1521 7.574779 CGGAGAAATTGTTTGTGATATGGTTCA 60.575 37.037 0.00 0.00 0.00 3.18
1484 1522 6.747280 CGGAGAAATTGTTTGTGATATGGTTC 59.253 38.462 0.00 0.00 0.00 3.62
1485 1523 6.432783 TCGGAGAAATTGTTTGTGATATGGTT 59.567 34.615 0.00 0.00 0.00 3.67
1486 1524 5.943416 TCGGAGAAATTGTTTGTGATATGGT 59.057 36.000 0.00 0.00 0.00 3.55
1487 1525 6.435430 TCGGAGAAATTGTTTGTGATATGG 57.565 37.500 0.00 0.00 0.00 2.74
1488 1526 6.316140 TCCTCGGAGAAATTGTTTGTGATATG 59.684 38.462 6.58 0.00 34.09 1.78
1489 1527 6.414732 TCCTCGGAGAAATTGTTTGTGATAT 58.585 36.000 6.58 0.00 34.09 1.63
1490 1528 5.800296 TCCTCGGAGAAATTGTTTGTGATA 58.200 37.500 6.58 0.00 34.09 2.15
1491 1529 4.651778 TCCTCGGAGAAATTGTTTGTGAT 58.348 39.130 6.58 0.00 34.09 3.06
1492 1530 4.065088 CTCCTCGGAGAAATTGTTTGTGA 58.935 43.478 6.58 0.00 44.53 3.58
1493 1531 3.365364 GCTCCTCGGAGAAATTGTTTGTG 60.365 47.826 16.92 0.00 44.53 3.33
1494 1532 2.814336 GCTCCTCGGAGAAATTGTTTGT 59.186 45.455 16.92 0.00 44.53 2.83
1495 1533 2.159653 CGCTCCTCGGAGAAATTGTTTG 60.160 50.000 16.92 0.00 44.53 2.93
1496 1534 2.076863 CGCTCCTCGGAGAAATTGTTT 58.923 47.619 16.92 0.00 44.53 2.83
1497 1535 1.726853 CGCTCCTCGGAGAAATTGTT 58.273 50.000 16.92 0.00 44.53 2.83
1498 1536 0.741221 GCGCTCCTCGGAGAAATTGT 60.741 55.000 16.92 0.00 44.53 2.71
1499 1537 0.740868 TGCGCTCCTCGGAGAAATTG 60.741 55.000 16.92 1.98 44.53 2.32
1500 1538 0.179000 ATGCGCTCCTCGGAGAAATT 59.821 50.000 16.92 0.00 44.53 1.82
1501 1539 1.040646 TATGCGCTCCTCGGAGAAAT 58.959 50.000 16.92 8.50 44.53 2.17
1502 1540 0.821517 TTATGCGCTCCTCGGAGAAA 59.178 50.000 16.92 1.56 44.53 2.52
1503 1541 1.040646 ATTATGCGCTCCTCGGAGAA 58.959 50.000 16.92 2.12 43.39 2.87
1504 1542 1.040646 AATTATGCGCTCCTCGGAGA 58.959 50.000 16.92 0.00 44.53 3.71
1505 1543 1.143305 CAATTATGCGCTCCTCGGAG 58.857 55.000 9.73 8.62 43.11 4.63
1506 1544 0.249868 CCAATTATGCGCTCCTCGGA 60.250 55.000 9.73 0.00 44.23 4.55
1507 1545 0.532862 ACCAATTATGCGCTCCTCGG 60.533 55.000 9.73 4.80 38.94 4.63
1508 1546 0.861837 GACCAATTATGCGCTCCTCG 59.138 55.000 9.73 0.00 42.12 4.63
1509 1547 0.861837 CGACCAATTATGCGCTCCTC 59.138 55.000 9.73 0.00 0.00 3.71
1510 1548 0.178068 ACGACCAATTATGCGCTCCT 59.822 50.000 9.73 0.00 0.00 3.69
1511 1549 0.304705 CACGACCAATTATGCGCTCC 59.695 55.000 9.73 0.00 0.00 4.70
1512 1550 0.304705 CCACGACCAATTATGCGCTC 59.695 55.000 9.73 0.00 0.00 5.03
1513 1551 0.392461 ACCACGACCAATTATGCGCT 60.392 50.000 9.73 0.00 0.00 5.92
1514 1552 0.248054 CACCACGACCAATTATGCGC 60.248 55.000 0.00 0.00 0.00 6.09
1515 1553 0.376852 CCACCACGACCAATTATGCG 59.623 55.000 0.00 0.00 0.00 4.73
1516 1554 0.100503 GCCACCACGACCAATTATGC 59.899 55.000 0.00 0.00 0.00 3.14
1517 1555 0.738389 GGCCACCACGACCAATTATG 59.262 55.000 0.00 0.00 0.00 1.90
1518 1556 0.329931 TGGCCACCACGACCAATTAT 59.670 50.000 0.00 0.00 0.00 1.28
1519 1557 0.329931 ATGGCCACCACGACCAATTA 59.670 50.000 8.16 0.00 35.80 1.40
1520 1558 1.076549 ATGGCCACCACGACCAATT 59.923 52.632 8.16 0.00 35.80 2.32
1521 1559 1.678635 CATGGCCACCACGACCAAT 60.679 57.895 8.16 0.00 35.80 3.16
1522 1560 2.282110 CATGGCCACCACGACCAA 60.282 61.111 8.16 0.00 35.80 3.67
1523 1561 4.343323 CCATGGCCACCACGACCA 62.343 66.667 8.16 0.00 35.80 4.02
1524 1562 3.976701 CTCCATGGCCACCACGACC 62.977 68.421 8.16 0.00 35.80 4.79
1525 1563 1.895020 TACTCCATGGCCACCACGAC 61.895 60.000 8.16 0.00 35.80 4.34
1526 1564 1.610967 TACTCCATGGCCACCACGA 60.611 57.895 8.16 0.00 35.80 4.35
1527 1565 1.153369 CTACTCCATGGCCACCACG 60.153 63.158 8.16 0.00 35.80 4.94
1528 1566 0.328258 AACTACTCCATGGCCACCAC 59.672 55.000 8.16 0.00 35.80 4.16
1529 1567 1.072266 AAACTACTCCATGGCCACCA 58.928 50.000 8.16 0.00 38.19 4.17
1530 1568 2.092323 GAAAACTACTCCATGGCCACC 58.908 52.381 8.16 0.00 0.00 4.61
1531 1569 2.790433 TGAAAACTACTCCATGGCCAC 58.210 47.619 8.16 0.00 0.00 5.01
1532 1570 3.420893 CTTGAAAACTACTCCATGGCCA 58.579 45.455 8.56 8.56 0.00 5.36
1533 1571 2.755103 CCTTGAAAACTACTCCATGGCC 59.245 50.000 6.96 0.00 0.00 5.36
1534 1572 3.421844 ACCTTGAAAACTACTCCATGGC 58.578 45.455 6.96 0.00 0.00 4.40
1535 1573 5.643777 CAGTACCTTGAAAACTACTCCATGG 59.356 44.000 4.97 4.97 0.00 3.66
1536 1574 6.231211 ACAGTACCTTGAAAACTACTCCATG 58.769 40.000 0.00 0.00 0.00 3.66
1537 1575 6.435292 ACAGTACCTTGAAAACTACTCCAT 57.565 37.500 0.00 0.00 0.00 3.41
1538 1576 5.881923 ACAGTACCTTGAAAACTACTCCA 57.118 39.130 0.00 0.00 0.00 3.86
1539 1577 5.860716 CGTACAGTACCTTGAAAACTACTCC 59.139 44.000 5.07 0.00 0.00 3.85
1540 1578 6.672147 TCGTACAGTACCTTGAAAACTACTC 58.328 40.000 5.07 0.00 0.00 2.59
1541 1579 6.639632 TCGTACAGTACCTTGAAAACTACT 57.360 37.500 5.07 0.00 0.00 2.57
1542 1580 7.880059 AATCGTACAGTACCTTGAAAACTAC 57.120 36.000 5.07 0.00 0.00 2.73
1543 1581 8.796475 AGTAATCGTACAGTACCTTGAAAACTA 58.204 33.333 5.07 0.00 32.12 2.24
1544 1582 7.664758 AGTAATCGTACAGTACCTTGAAAACT 58.335 34.615 5.07 3.04 32.12 2.66
1545 1583 7.880059 AGTAATCGTACAGTACCTTGAAAAC 57.120 36.000 5.07 1.09 32.12 2.43
1546 1584 8.796475 AGTAGTAATCGTACAGTACCTTGAAAA 58.204 33.333 5.07 0.00 32.12 2.29
1547 1585 8.340618 AGTAGTAATCGTACAGTACCTTGAAA 57.659 34.615 5.07 0.00 32.12 2.69
1548 1586 7.928307 AGTAGTAATCGTACAGTACCTTGAA 57.072 36.000 5.07 0.00 32.12 2.69
1549 1587 7.225538 GCTAGTAGTAATCGTACAGTACCTTGA 59.774 40.741 5.07 0.00 32.12 3.02
1550 1588 7.011763 TGCTAGTAGTAATCGTACAGTACCTTG 59.988 40.741 5.07 0.00 32.12 3.61
1551 1589 7.050377 TGCTAGTAGTAATCGTACAGTACCTT 58.950 38.462 5.07 2.32 32.12 3.50
1552 1590 6.586344 TGCTAGTAGTAATCGTACAGTACCT 58.414 40.000 5.07 0.00 32.12 3.08
1553 1591 6.851222 TGCTAGTAGTAATCGTACAGTACC 57.149 41.667 5.07 0.00 32.12 3.34
1575 1613 9.305925 GACAAAGGGAATAGAAAGCAAAATATG 57.694 33.333 0.00 0.00 0.00 1.78
1576 1614 8.478066 GGACAAAGGGAATAGAAAGCAAAATAT 58.522 33.333 0.00 0.00 0.00 1.28
1577 1615 7.093509 GGGACAAAGGGAATAGAAAGCAAAATA 60.094 37.037 0.00 0.00 0.00 1.40
1578 1616 6.295859 GGGACAAAGGGAATAGAAAGCAAAAT 60.296 38.462 0.00 0.00 0.00 1.82
1579 1617 5.011635 GGGACAAAGGGAATAGAAAGCAAAA 59.988 40.000 0.00 0.00 0.00 2.44
1580 1618 4.526650 GGGACAAAGGGAATAGAAAGCAAA 59.473 41.667 0.00 0.00 0.00 3.68
1581 1619 4.086457 GGGACAAAGGGAATAGAAAGCAA 58.914 43.478 0.00 0.00 0.00 3.91
1582 1620 3.075283 TGGGACAAAGGGAATAGAAAGCA 59.925 43.478 0.00 0.00 31.92 3.91
1583 1621 3.697166 TGGGACAAAGGGAATAGAAAGC 58.303 45.455 0.00 0.00 31.92 3.51
1627 1665 9.919348 GTAAGAACGTTTTTGACATTAGTGTAA 57.081 29.630 13.87 0.00 39.09 2.41
1628 1666 9.316730 AGTAAGAACGTTTTTGACATTAGTGTA 57.683 29.630 13.87 0.00 39.09 2.90
1629 1667 8.205131 AGTAAGAACGTTTTTGACATTAGTGT 57.795 30.769 13.87 0.00 42.49 3.55
1630 1668 8.332464 TGAGTAAGAACGTTTTTGACATTAGTG 58.668 33.333 13.87 0.00 0.00 2.74
1631 1669 8.428186 TGAGTAAGAACGTTTTTGACATTAGT 57.572 30.769 13.87 0.00 0.00 2.24
1632 1670 9.370126 CTTGAGTAAGAACGTTTTTGACATTAG 57.630 33.333 13.87 4.01 35.92 1.73
1633 1671 8.885722 ACTTGAGTAAGAACGTTTTTGACATTA 58.114 29.630 13.87 0.00 37.36 1.90
1634 1672 7.758495 ACTTGAGTAAGAACGTTTTTGACATT 58.242 30.769 13.87 0.00 37.36 2.71
1635 1673 7.316544 ACTTGAGTAAGAACGTTTTTGACAT 57.683 32.000 13.87 0.00 37.36 3.06
1636 1674 6.730960 ACTTGAGTAAGAACGTTTTTGACA 57.269 33.333 13.87 8.26 37.36 3.58
1666 1704 8.439286 GCTCTGTTTTTATGTTTTTGTGTTTCA 58.561 29.630 0.00 0.00 0.00 2.69
1667 1705 8.439286 TGCTCTGTTTTTATGTTTTTGTGTTTC 58.561 29.630 0.00 0.00 0.00 2.78
1668 1706 8.316640 TGCTCTGTTTTTATGTTTTTGTGTTT 57.683 26.923 0.00 0.00 0.00 2.83
1669 1707 7.897575 TGCTCTGTTTTTATGTTTTTGTGTT 57.102 28.000 0.00 0.00 0.00 3.32
1670 1708 8.389603 CAATGCTCTGTTTTTATGTTTTTGTGT 58.610 29.630 0.00 0.00 0.00 3.72
1671 1709 8.389603 ACAATGCTCTGTTTTTATGTTTTTGTG 58.610 29.630 0.00 0.00 0.00 3.33
1672 1710 8.491331 ACAATGCTCTGTTTTTATGTTTTTGT 57.509 26.923 0.00 0.00 0.00 2.83
1673 1711 9.771915 AAACAATGCTCTGTTTTTATGTTTTTG 57.228 25.926 9.95 0.00 45.10 2.44
1674 1712 9.986833 GAAACAATGCTCTGTTTTTATGTTTTT 57.013 25.926 15.05 0.00 46.84 1.94
1675 1713 9.382275 AGAAACAATGCTCTGTTTTTATGTTTT 57.618 25.926 15.05 0.00 46.84 2.43
1676 1714 8.947055 AGAAACAATGCTCTGTTTTTATGTTT 57.053 26.923 15.05 0.00 46.84 2.83
1677 1715 8.196771 TGAGAAACAATGCTCTGTTTTTATGTT 58.803 29.630 15.05 0.00 46.84 2.71
1678 1716 7.715657 TGAGAAACAATGCTCTGTTTTTATGT 58.284 30.769 15.05 2.73 46.84 2.29
1679 1717 8.077991 TCTGAGAAACAATGCTCTGTTTTTATG 58.922 33.333 15.05 8.23 46.84 1.90
1680 1718 8.078596 GTCTGAGAAACAATGCTCTGTTTTTAT 58.921 33.333 15.05 7.36 46.84 1.40
1681 1719 7.417612 GTCTGAGAAACAATGCTCTGTTTTTA 58.582 34.615 15.05 6.87 46.84 1.52
1682 1720 6.268566 GTCTGAGAAACAATGCTCTGTTTTT 58.731 36.000 15.05 11.00 46.84 1.94
1683 1721 5.504665 CGTCTGAGAAACAATGCTCTGTTTT 60.505 40.000 15.05 7.81 46.84 2.43
1685 1723 3.496130 CGTCTGAGAAACAATGCTCTGTT 59.504 43.478 0.00 0.00 41.31 3.16
1686 1724 3.062763 CGTCTGAGAAACAATGCTCTGT 58.937 45.455 0.00 0.00 33.46 3.41
1687 1725 2.159734 GCGTCTGAGAAACAATGCTCTG 60.160 50.000 0.00 0.00 32.44 3.35
1688 1726 2.072298 GCGTCTGAGAAACAATGCTCT 58.928 47.619 0.00 0.00 32.44 4.09
1689 1727 1.201855 CGCGTCTGAGAAACAATGCTC 60.202 52.381 0.00 0.00 0.00 4.26
1690 1728 0.792640 CGCGTCTGAGAAACAATGCT 59.207 50.000 0.00 0.00 0.00 3.79
1691 1729 0.790207 TCGCGTCTGAGAAACAATGC 59.210 50.000 5.77 0.00 0.00 3.56
1692 1730 2.061773 AGTCGCGTCTGAGAAACAATG 58.938 47.619 5.77 0.00 0.00 2.82
1693 1731 2.440539 AGTCGCGTCTGAGAAACAAT 57.559 45.000 5.77 0.00 0.00 2.71
1694 1732 2.292569 ACTAGTCGCGTCTGAGAAACAA 59.707 45.455 16.20 0.00 0.00 2.83
1695 1733 1.878088 ACTAGTCGCGTCTGAGAAACA 59.122 47.619 16.20 0.00 0.00 2.83
1696 1734 2.507866 GACTAGTCGCGTCTGAGAAAC 58.492 52.381 16.20 0.00 0.00 2.78
1697 1735 1.128136 CGACTAGTCGCGTCTGAGAAA 59.872 52.381 30.44 0.00 46.50 2.52
1698 1736 0.720027 CGACTAGTCGCGTCTGAGAA 59.280 55.000 30.44 0.00 46.50 2.87
1699 1737 2.370885 CGACTAGTCGCGTCTGAGA 58.629 57.895 30.44 0.00 46.50 3.27
1700 1738 4.957363 CGACTAGTCGCGTCTGAG 57.043 61.111 30.44 11.15 46.50 3.35
1749 1787 6.183361 GGGTGCTCTTTCCTATTATGAGAGAA 60.183 42.308 3.07 0.00 36.77 2.87
1754 1792 4.442893 CGTGGGTGCTCTTTCCTATTATGA 60.443 45.833 0.00 0.00 0.00 2.15
1755 1793 3.809832 CGTGGGTGCTCTTTCCTATTATG 59.190 47.826 0.00 0.00 0.00 1.90
1784 1822 5.382664 TTTCCTTTTCTAGGTGTTCCTGT 57.617 39.130 0.00 0.00 44.81 4.00
1870 1909 7.609960 AGAAACCCAACGGTAAAAACTTTTTA 58.390 30.769 3.04 3.04 43.71 1.52
1881 1957 1.373246 CGCGAGAAACCCAACGGTA 60.373 57.895 0.00 0.00 43.71 4.02
2033 2114 4.034510 CCAACTTACAAAGATCATCCGCTC 59.965 45.833 0.00 0.00 0.00 5.03
2045 2126 6.183361 TGGTAGTCATGGTACCAACTTACAAA 60.183 38.462 21.47 10.46 45.67 2.83
2196 2287 6.489127 TTTCGGACATACATACTTGTTTGG 57.511 37.500 2.50 0.00 38.62 3.28
2198 2289 8.561738 AGAATTTCGGACATACATACTTGTTT 57.438 30.769 0.00 0.00 37.28 2.83
2206 2297 5.064707 CGTTTGGAGAATTTCGGACATACAT 59.935 40.000 9.92 0.00 0.00 2.29
2401 2499 2.283298 GCATCATCAGACAACGGTCAT 58.717 47.619 0.00 0.00 46.80 3.06
2437 2535 2.284190 TGTGAACATCGTGTTTGCTCA 58.716 42.857 5.14 0.00 41.28 4.26
2450 2548 2.324860 CGCGTCATCTAGTTGTGAACA 58.675 47.619 0.00 0.00 0.00 3.18
2453 2551 0.457853 GGCGCGTCATCTAGTTGTGA 60.458 55.000 5.47 0.00 0.00 3.58
2456 2554 0.647410 CTTGGCGCGTCATCTAGTTG 59.353 55.000 16.97 0.00 0.00 3.16
2472 2570 0.034089 GGGACAATGTCTCCCCCTTG 60.034 60.000 13.53 0.00 41.70 3.61
2510 2608 2.422597 TGTCACCTCCTTATTGCAACG 58.577 47.619 0.00 0.00 0.00 4.10
2515 2613 5.299279 AGTTGTTGTTGTCACCTCCTTATTG 59.701 40.000 0.00 0.00 0.00 1.90
2518 2616 4.497291 AGTTGTTGTTGTCACCTCCTTA 57.503 40.909 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.