Multiple sequence alignment - TraesCS7A01G013700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G013700 chr7A 100.000 3311 0 0 1 3311 6298604 6301914 0.000000e+00 6115.0
1 TraesCS7A01G013700 chr7A 85.773 1462 190 15 930 2383 50235216 50233765 0.000000e+00 1531.0
2 TraesCS7A01G013700 chr7A 86.111 72 7 3 2984 3054 699632762 699632693 1.270000e-09 75.0
3 TraesCS7A01G013700 chr4A 96.935 2186 60 5 136 2319 737708587 737710767 0.000000e+00 3659.0
4 TraesCS7A01G013700 chr4A 85.932 526 53 11 2320 2844 737710855 737711360 2.910000e-150 542.0
5 TraesCS7A01G013700 chr4A 97.101 138 4 0 1 138 737708193 737708330 1.990000e-57 233.0
6 TraesCS7A01G013700 chr4A 89.394 66 7 0 2984 3049 725568063 725568128 2.120000e-12 84.2
7 TraesCS7A01G013700 chr5D 82.668 2204 311 51 110 2294 50574411 50576562 0.000000e+00 1888.0
8 TraesCS7A01G013700 chr5D 82.128 2199 322 42 123 2294 50644633 50646787 0.000000e+00 1818.0
9 TraesCS7A01G013700 chr5D 84.362 1701 228 27 605 2294 42984192 42985865 0.000000e+00 1633.0
10 TraesCS7A01G013700 chr5D 87.675 1355 156 11 975 2326 50927611 50926265 0.000000e+00 1567.0
11 TraesCS7A01G013700 chr5A 81.760 2204 336 49 114 2290 39928072 39930236 0.000000e+00 1783.0
12 TraesCS7A01G013700 chr5A 85.826 1411 179 13 926 2323 40161041 40162443 0.000000e+00 1478.0
13 TraesCS7A01G013700 chr5B 81.416 2190 345 44 123 2294 53538359 53540504 0.000000e+00 1733.0
14 TraesCS7A01G013700 chr1B 80.804 448 72 11 1961 2404 409016446 409016883 4.090000e-89 339.0
15 TraesCS7A01G013700 chr3D 95.109 184 7 2 2984 3167 341541546 341541365 4.180000e-74 289.0
16 TraesCS7A01G013700 chr3D 97.917 144 3 0 3168 3311 341541323 341541180 1.970000e-62 250.0
17 TraesCS7A01G013700 chr3B 85.965 114 16 0 2728 2841 4343539 4343426 4.490000e-24 122.0
18 TraesCS7A01G013700 chr3B 89.189 74 8 0 2984 3057 650069445 650069518 3.520000e-15 93.5
19 TraesCS7A01G013700 chr3B 86.765 68 9 0 2773 2840 4342769 4342702 3.540000e-10 76.8
20 TraesCS7A01G013700 chr2A 88.608 79 8 1 2979 3057 2408734 2408811 9.780000e-16 95.3
21 TraesCS7A01G013700 chr2A 89.189 74 7 1 2984 3057 49430701 49430773 1.270000e-14 91.6
22 TraesCS7A01G013700 chr2A 87.879 66 8 0 2984 3049 768613617 768613682 9.850000e-11 78.7
23 TraesCS7A01G013700 chr2B 88.060 67 6 2 2984 3049 717621958 717622023 9.850000e-11 78.7
24 TraesCS7A01G013700 chr2D 86.154 65 9 0 2984 3048 649073056 649072992 1.650000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G013700 chr7A 6298604 6301914 3310 False 6115 6115 100.000000 1 3311 1 chr7A.!!$F1 3310
1 TraesCS7A01G013700 chr7A 50233765 50235216 1451 True 1531 1531 85.773000 930 2383 1 chr7A.!!$R1 1453
2 TraesCS7A01G013700 chr4A 737708193 737711360 3167 False 1478 3659 93.322667 1 2844 3 chr4A.!!$F2 2843
3 TraesCS7A01G013700 chr5D 50574411 50576562 2151 False 1888 1888 82.668000 110 2294 1 chr5D.!!$F2 2184
4 TraesCS7A01G013700 chr5D 50644633 50646787 2154 False 1818 1818 82.128000 123 2294 1 chr5D.!!$F3 2171
5 TraesCS7A01G013700 chr5D 42984192 42985865 1673 False 1633 1633 84.362000 605 2294 1 chr5D.!!$F1 1689
6 TraesCS7A01G013700 chr5D 50926265 50927611 1346 True 1567 1567 87.675000 975 2326 1 chr5D.!!$R1 1351
7 TraesCS7A01G013700 chr5A 39928072 39930236 2164 False 1783 1783 81.760000 114 2290 1 chr5A.!!$F1 2176
8 TraesCS7A01G013700 chr5A 40161041 40162443 1402 False 1478 1478 85.826000 926 2323 1 chr5A.!!$F2 1397
9 TraesCS7A01G013700 chr5B 53538359 53540504 2145 False 1733 1733 81.416000 123 2294 1 chr5B.!!$F1 2171

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
811 1107 1.135199 GCTGGTTATCGGACTTGTCGA 60.135 52.381 0.0 0.0 41.04 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2723 3128 0.179084 GCGTTTGATCTGGGATCGGA 60.179 55.0 0.0 0.0 0.0 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.664851 TTTCGACTGCAGGTGCCG 60.665 61.111 19.93 15.13 41.18 5.69
284 553 6.645790 AGGTGCAAAGATATCATTCATTCC 57.354 37.500 5.32 0.00 0.00 3.01
318 587 5.084818 ACCAACTCCCTTTTGTTTTCTTG 57.915 39.130 0.00 0.00 0.00 3.02
466 735 9.220767 ACTTCTGCTAAGAAATTTAGGTTGTAG 57.779 33.333 6.41 0.00 41.89 2.74
610 888 9.674824 CAAGCATTTCATATCCATAGAAGAAAC 57.325 33.333 0.00 0.00 29.72 2.78
720 1005 8.839310 TCCAAAATTTTGAAACAGAAGTCAAA 57.161 26.923 28.44 0.00 40.93 2.69
730 1015 6.536582 TGAAACAGAAGTCAAAACTCTCTCTG 59.463 38.462 4.86 4.86 33.48 3.35
811 1107 1.135199 GCTGGTTATCGGACTTGTCGA 60.135 52.381 0.00 0.00 41.04 4.20
1085 1391 2.380064 TCAGTTTCAAGTGGCCCAAT 57.620 45.000 0.00 0.00 0.00 3.16
1230 1542 4.467438 TCTCATAGGTCAGACATTGCAGAA 59.533 41.667 2.17 0.00 0.00 3.02
2247 2565 4.070630 AGAAGAATATCTGCTGTCTGGC 57.929 45.455 0.00 0.00 29.08 4.85
2393 2798 5.666969 TGTTTCCTTAATCTGTGTGTTCG 57.333 39.130 0.00 0.00 0.00 3.95
2400 2805 3.818961 AATCTGTGTGTTCGCAATCAG 57.181 42.857 0.00 0.00 33.51 2.90
2420 2825 8.944029 CAATCAGTTTCTATCAGTGAAGTTGAT 58.056 33.333 0.00 0.00 38.70 2.57
2489 2894 9.730420 AAACAAAATTCAAGGTATACATATCGC 57.270 29.630 5.01 0.00 0.00 4.58
2507 2912 1.004277 GCTTACGAGGATGCCGATCG 61.004 60.000 8.51 8.51 42.04 3.69
2525 2930 2.030717 ATCGGAGACATAGCTAAGTGCG 60.031 50.000 6.30 4.64 44.43 5.34
2535 2940 1.153509 CTAAGTGCGGGGTAACGGG 60.154 63.158 0.00 0.00 37.60 5.28
2557 2962 5.571741 GGGCGCTAATTTTTAGAAAGTTGAC 59.428 40.000 7.64 0.00 0.00 3.18
2562 2967 9.872757 CGCTAATTTTTAGAAAGTTGACACTTA 57.127 29.630 0.00 0.00 42.89 2.24
2572 2977 2.870411 AGTTGACACTTACAGTTTCGGC 59.130 45.455 0.00 0.00 27.81 5.54
2574 2979 1.202440 TGACACTTACAGTTTCGGCGT 60.202 47.619 6.85 0.00 27.81 5.68
2578 2983 1.202440 ACTTACAGTTTCGGCGTGACA 60.202 47.619 6.85 0.00 0.00 3.58
2587 2992 2.324330 CGGCGTGACATTGCTGGAA 61.324 57.895 0.00 0.00 33.80 3.53
2593 2998 1.461127 GTGACATTGCTGGAACTCGTC 59.539 52.381 2.38 2.38 0.00 4.20
2594 2999 0.716108 GACATTGCTGGAACTCGTCG 59.284 55.000 0.00 0.00 0.00 5.12
2596 3001 2.094659 ATTGCTGGAACTCGTCGCG 61.095 57.895 0.00 0.00 0.00 5.87
2598 3003 4.415332 GCTGGAACTCGTCGCGGA 62.415 66.667 6.13 0.00 0.00 5.54
2619 3024 1.304713 AGGTGGCCAATGAAGCTGG 60.305 57.895 7.24 0.00 36.99 4.85
2621 3026 1.318158 GGTGGCCAATGAAGCTGGAG 61.318 60.000 7.24 0.00 35.85 3.86
2638 3043 1.334869 GGAGCTGATGGTAATTTGGCG 59.665 52.381 0.00 0.00 0.00 5.69
2646 3051 2.530701 TGGTAATTTGGCGATTTGGGT 58.469 42.857 0.00 0.00 0.00 4.51
2656 3061 1.268352 GCGATTTGGGTGCACAACTTA 59.732 47.619 20.43 3.79 0.00 2.24
2664 3069 3.211045 GGGTGCACAACTTAACTGAGAA 58.789 45.455 20.43 0.00 0.00 2.87
2665 3070 3.630312 GGGTGCACAACTTAACTGAGAAA 59.370 43.478 20.43 0.00 0.00 2.52
2666 3071 4.278419 GGGTGCACAACTTAACTGAGAAAT 59.722 41.667 20.43 0.00 0.00 2.17
2667 3072 5.472137 GGGTGCACAACTTAACTGAGAAATA 59.528 40.000 20.43 0.00 0.00 1.40
2668 3073 6.371389 GGTGCACAACTTAACTGAGAAATAC 58.629 40.000 20.43 0.00 0.00 1.89
2669 3074 6.017440 GGTGCACAACTTAACTGAGAAATACA 60.017 38.462 20.43 0.00 0.00 2.29
2670 3075 7.308589 GGTGCACAACTTAACTGAGAAATACAT 60.309 37.037 20.43 0.00 0.00 2.29
2671 3076 7.535258 GTGCACAACTTAACTGAGAAATACATG 59.465 37.037 13.17 0.00 0.00 3.21
2672 3077 7.023575 GCACAACTTAACTGAGAAATACATGG 58.976 38.462 0.00 0.00 0.00 3.66
2675 3080 7.607991 ACAACTTAACTGAGAAATACATGGAGG 59.392 37.037 0.00 0.00 0.00 4.30
2680 3085 5.491982 ACTGAGAAATACATGGAGGACAAC 58.508 41.667 0.00 0.00 0.00 3.32
2699 3104 4.162320 ACAACTGGAGAAGTTCAAGAGTGA 59.838 41.667 5.50 0.00 46.60 3.41
2700 3105 5.118990 CAACTGGAGAAGTTCAAGAGTGAA 58.881 41.667 5.50 0.00 46.60 3.18
2701 3106 5.559148 ACTGGAGAAGTTCAAGAGTGAAT 57.441 39.130 5.50 0.00 45.38 2.57
2702 3107 6.672266 ACTGGAGAAGTTCAAGAGTGAATA 57.328 37.500 5.50 0.00 45.38 1.75
2703 3108 7.251321 ACTGGAGAAGTTCAAGAGTGAATAT 57.749 36.000 5.50 0.00 45.38 1.28
2704 3109 7.327214 ACTGGAGAAGTTCAAGAGTGAATATC 58.673 38.462 5.50 0.00 45.38 1.63
2705 3110 7.180051 ACTGGAGAAGTTCAAGAGTGAATATCT 59.820 37.037 5.50 6.65 45.38 1.98
2709 3114 8.088463 AGAAGTTCAAGAGTGAATATCTCCAT 57.912 34.615 5.50 0.00 45.38 3.41
2711 3116 7.192852 AGTTCAAGAGTGAATATCTCCATGT 57.807 36.000 0.00 0.00 45.38 3.21
2712 3117 7.046652 AGTTCAAGAGTGAATATCTCCATGTG 58.953 38.462 0.00 0.00 45.38 3.21
2713 3118 6.796785 TCAAGAGTGAATATCTCCATGTGA 57.203 37.500 0.00 0.00 32.93 3.58
2714 3119 7.186570 TCAAGAGTGAATATCTCCATGTGAA 57.813 36.000 0.00 0.00 32.93 3.18
2715 3120 7.623630 TCAAGAGTGAATATCTCCATGTGAAA 58.376 34.615 0.00 0.00 32.93 2.69
2716 3121 8.102676 TCAAGAGTGAATATCTCCATGTGAAAA 58.897 33.333 0.00 0.00 32.93 2.29
2717 3122 8.900781 CAAGAGTGAATATCTCCATGTGAAAAT 58.099 33.333 0.00 0.00 32.93 1.82
2718 3123 8.447924 AGAGTGAATATCTCCATGTGAAAATG 57.552 34.615 0.00 0.00 32.93 2.32
2720 3125 6.040166 AGTGAATATCTCCATGTGAAAATGGC 59.960 38.462 0.00 0.00 45.82 4.40
2721 3126 6.040166 GTGAATATCTCCATGTGAAAATGGCT 59.960 38.462 0.00 0.00 45.82 4.75
2722 3127 6.608405 TGAATATCTCCATGTGAAAATGGCTT 59.392 34.615 0.00 0.00 45.82 4.35
2723 3128 7.124599 TGAATATCTCCATGTGAAAATGGCTTT 59.875 33.333 0.00 0.00 45.82 3.51
2724 3129 4.789012 TCTCCATGTGAAAATGGCTTTC 57.211 40.909 0.00 0.00 45.82 2.62
2725 3130 3.511146 TCTCCATGTGAAAATGGCTTTCC 59.489 43.478 0.00 0.00 45.82 3.13
2726 3131 2.230992 TCCATGTGAAAATGGCTTTCCG 59.769 45.455 0.00 0.00 45.82 4.30
2739 3144 2.643551 GCTTTCCGATCCCAGATCAAA 58.356 47.619 5.51 0.00 0.00 2.69
2768 3173 3.668141 ATGGAGGACATGGCAATTGTA 57.332 42.857 7.40 0.00 38.70 2.41
2780 3185 2.102578 GCAATTGTATTCAGGCTGGGT 58.897 47.619 15.73 6.23 0.00 4.51
2781 3186 3.287222 GCAATTGTATTCAGGCTGGGTA 58.713 45.455 15.73 5.18 0.00 3.69
2783 3188 4.022849 GCAATTGTATTCAGGCTGGGTATC 60.023 45.833 15.73 2.95 0.00 2.24
2790 3195 0.886490 CAGGCTGGGTATCGATTGCC 60.886 60.000 6.61 10.22 40.54 4.52
2803 3208 1.379843 ATTGCCCCGTTGTGGATCC 60.380 57.895 4.20 4.20 42.00 3.36
2813 3218 1.243342 TTGTGGATCCGCAGCAAAGG 61.243 55.000 26.17 0.00 37.75 3.11
2836 3241 3.489391 CCATGCAGATGGCTCTCAA 57.511 52.632 0.00 0.00 43.00 3.02
2840 3245 0.321346 TGCAGATGGCTCTCAAACGA 59.679 50.000 0.00 0.00 45.15 3.85
2844 3249 2.094286 CAGATGGCTCTCAAACGACTCT 60.094 50.000 0.00 0.00 0.00 3.24
2845 3250 2.564947 AGATGGCTCTCAAACGACTCTT 59.435 45.455 0.00 0.00 0.00 2.85
2846 3251 2.154854 TGGCTCTCAAACGACTCTTG 57.845 50.000 0.00 0.00 0.00 3.02
2847 3252 1.270305 TGGCTCTCAAACGACTCTTGG 60.270 52.381 0.00 0.00 0.00 3.61
2848 3253 1.000955 GGCTCTCAAACGACTCTTGGA 59.999 52.381 0.00 0.00 0.00 3.53
2849 3254 2.333014 GCTCTCAAACGACTCTTGGAG 58.667 52.381 0.00 0.00 35.52 3.86
2850 3255 2.029828 GCTCTCAAACGACTCTTGGAGA 60.030 50.000 1.31 0.00 33.32 3.71
2851 3256 3.570559 CTCTCAAACGACTCTTGGAGAC 58.429 50.000 1.31 0.00 33.32 3.36
2852 3257 2.956333 TCTCAAACGACTCTTGGAGACA 59.044 45.455 1.31 0.00 39.83 3.41
2853 3258 3.574396 TCTCAAACGACTCTTGGAGACAT 59.426 43.478 1.31 0.00 42.32 3.06
2854 3259 4.039245 TCTCAAACGACTCTTGGAGACATT 59.961 41.667 1.31 0.00 42.32 2.71
2855 3260 4.307432 TCAAACGACTCTTGGAGACATTC 58.693 43.478 1.31 0.00 42.32 2.67
2856 3261 4.039245 TCAAACGACTCTTGGAGACATTCT 59.961 41.667 1.31 0.00 42.32 2.40
2857 3262 3.584406 ACGACTCTTGGAGACATTCTG 57.416 47.619 1.31 0.00 42.32 3.02
2858 3263 2.894126 ACGACTCTTGGAGACATTCTGT 59.106 45.455 1.31 0.00 42.32 3.41
2859 3264 3.322254 ACGACTCTTGGAGACATTCTGTT 59.678 43.478 1.31 0.00 42.32 3.16
2860 3265 4.523173 ACGACTCTTGGAGACATTCTGTTA 59.477 41.667 1.31 0.00 42.32 2.41
2861 3266 4.859798 CGACTCTTGGAGACATTCTGTTAC 59.140 45.833 1.31 0.00 42.32 2.50
2862 3267 5.564848 CGACTCTTGGAGACATTCTGTTACA 60.565 44.000 1.31 0.00 42.32 2.41
2863 3268 6.365970 ACTCTTGGAGACATTCTGTTACAT 57.634 37.500 1.31 0.00 42.32 2.29
2864 3269 6.773638 ACTCTTGGAGACATTCTGTTACATT 58.226 36.000 1.31 0.00 42.32 2.71
2865 3270 6.876257 ACTCTTGGAGACATTCTGTTACATTC 59.124 38.462 1.31 0.00 42.32 2.67
2866 3271 7.009179 TCTTGGAGACATTCTGTTACATTCT 57.991 36.000 0.00 0.00 42.32 2.40
2867 3272 6.875726 TCTTGGAGACATTCTGTTACATTCTG 59.124 38.462 0.00 0.00 42.32 3.02
2868 3273 4.937620 TGGAGACATTCTGTTACATTCTGC 59.062 41.667 0.00 0.00 33.40 4.26
2869 3274 4.937620 GGAGACATTCTGTTACATTCTGCA 59.062 41.667 0.00 0.00 0.00 4.41
2870 3275 5.587844 GGAGACATTCTGTTACATTCTGCAT 59.412 40.000 0.00 0.00 0.00 3.96
2871 3276 6.432607 AGACATTCTGTTACATTCTGCATG 57.567 37.500 0.00 0.00 39.07 4.06
2872 3277 6.175471 AGACATTCTGTTACATTCTGCATGA 58.825 36.000 0.00 0.00 36.24 3.07
2873 3278 6.827251 AGACATTCTGTTACATTCTGCATGAT 59.173 34.615 0.00 0.00 36.24 2.45
2874 3279 7.012138 AGACATTCTGTTACATTCTGCATGATC 59.988 37.037 0.00 0.00 36.24 2.92
2875 3280 6.039047 ACATTCTGTTACATTCTGCATGATCC 59.961 38.462 0.00 0.00 36.24 3.36
2876 3281 5.363562 TCTGTTACATTCTGCATGATCCT 57.636 39.130 0.00 0.00 36.24 3.24
2877 3282 6.484364 TCTGTTACATTCTGCATGATCCTA 57.516 37.500 0.00 0.00 36.24 2.94
2878 3283 6.283694 TCTGTTACATTCTGCATGATCCTAC 58.716 40.000 0.00 0.00 36.24 3.18
2879 3284 5.368145 TGTTACATTCTGCATGATCCTACC 58.632 41.667 0.00 0.00 36.24 3.18
2880 3285 3.117491 ACATTCTGCATGATCCTACCG 57.883 47.619 0.00 0.00 36.24 4.02
2881 3286 1.802960 CATTCTGCATGATCCTACCGC 59.197 52.381 0.00 0.00 34.31 5.68
2882 3287 0.829990 TTCTGCATGATCCTACCGCA 59.170 50.000 0.00 0.00 0.00 5.69
2883 3288 0.829990 TCTGCATGATCCTACCGCAA 59.170 50.000 0.00 0.00 31.10 4.85
2884 3289 1.209261 TCTGCATGATCCTACCGCAAA 59.791 47.619 0.00 0.00 31.10 3.68
2885 3290 1.600957 CTGCATGATCCTACCGCAAAG 59.399 52.381 0.00 0.00 31.10 2.77
2886 3291 1.065491 TGCATGATCCTACCGCAAAGT 60.065 47.619 0.00 0.00 0.00 2.66
2887 3292 2.017049 GCATGATCCTACCGCAAAGTT 58.983 47.619 0.00 0.00 0.00 2.66
2888 3293 2.032178 GCATGATCCTACCGCAAAGTTC 59.968 50.000 0.00 0.00 0.00 3.01
2889 3294 3.535561 CATGATCCTACCGCAAAGTTCT 58.464 45.455 0.00 0.00 0.00 3.01
2890 3295 3.695830 TGATCCTACCGCAAAGTTCTT 57.304 42.857 0.00 0.00 0.00 2.52
2891 3296 3.596214 TGATCCTACCGCAAAGTTCTTC 58.404 45.455 0.00 0.00 0.00 2.87
2892 3297 2.467566 TCCTACCGCAAAGTTCTTCC 57.532 50.000 0.00 0.00 0.00 3.46
2893 3298 1.695242 TCCTACCGCAAAGTTCTTCCA 59.305 47.619 0.00 0.00 0.00 3.53
2894 3299 2.304761 TCCTACCGCAAAGTTCTTCCAT 59.695 45.455 0.00 0.00 0.00 3.41
2895 3300 2.420022 CCTACCGCAAAGTTCTTCCATG 59.580 50.000 0.00 0.00 0.00 3.66
2896 3301 2.270352 ACCGCAAAGTTCTTCCATGA 57.730 45.000 0.00 0.00 0.00 3.07
2897 3302 2.154462 ACCGCAAAGTTCTTCCATGAG 58.846 47.619 0.00 0.00 0.00 2.90
2898 3303 2.224523 ACCGCAAAGTTCTTCCATGAGA 60.225 45.455 0.00 0.00 0.00 3.27
2899 3304 2.813754 CCGCAAAGTTCTTCCATGAGAA 59.186 45.455 0.00 0.00 33.44 2.87
2908 3313 5.400066 TTCTTCCATGAGAACACGTATGA 57.600 39.130 0.00 0.00 30.98 2.15
2909 3314 4.744570 TCTTCCATGAGAACACGTATGAC 58.255 43.478 0.00 0.00 0.00 3.06
2910 3315 3.520290 TCCATGAGAACACGTATGACC 57.480 47.619 0.00 0.00 0.00 4.02
2911 3316 2.829120 TCCATGAGAACACGTATGACCA 59.171 45.455 0.00 0.00 0.00 4.02
2912 3317 3.119137 TCCATGAGAACACGTATGACCAG 60.119 47.826 0.00 0.00 0.00 4.00
2913 3318 3.119137 CCATGAGAACACGTATGACCAGA 60.119 47.826 0.00 0.00 0.00 3.86
2914 3319 4.494484 CATGAGAACACGTATGACCAGAA 58.506 43.478 0.00 0.00 0.00 3.02
2915 3320 4.174411 TGAGAACACGTATGACCAGAAG 57.826 45.455 0.00 0.00 0.00 2.85
2916 3321 2.924290 GAGAACACGTATGACCAGAAGC 59.076 50.000 0.00 0.00 0.00 3.86
2917 3322 2.299013 AGAACACGTATGACCAGAAGCA 59.701 45.455 0.00 0.00 0.00 3.91
2918 3323 2.370281 ACACGTATGACCAGAAGCAG 57.630 50.000 0.00 0.00 0.00 4.24
2919 3324 1.618837 ACACGTATGACCAGAAGCAGT 59.381 47.619 0.00 0.00 0.00 4.40
2920 3325 2.037251 ACACGTATGACCAGAAGCAGTT 59.963 45.455 0.00 0.00 0.00 3.16
2921 3326 2.668457 CACGTATGACCAGAAGCAGTTC 59.332 50.000 0.00 0.00 0.00 3.01
2922 3327 2.271800 CGTATGACCAGAAGCAGTTCC 58.728 52.381 0.00 0.00 32.48 3.62
2923 3328 2.093973 CGTATGACCAGAAGCAGTTCCT 60.094 50.000 0.00 0.00 32.48 3.36
2924 3329 2.486472 ATGACCAGAAGCAGTTCCTG 57.514 50.000 0.00 0.00 32.48 3.86
2925 3330 1.131638 TGACCAGAAGCAGTTCCTGT 58.868 50.000 0.00 0.00 33.43 4.00
2926 3331 1.202687 TGACCAGAAGCAGTTCCTGTG 60.203 52.381 0.00 0.00 33.43 3.66
2927 3332 1.070758 GACCAGAAGCAGTTCCTGTGA 59.929 52.381 0.00 0.00 33.43 3.58
2928 3333 1.202698 ACCAGAAGCAGTTCCTGTGAC 60.203 52.381 0.00 0.00 33.43 3.67
2929 3334 1.143305 CAGAAGCAGTTCCTGTGACG 58.857 55.000 0.00 0.00 33.43 4.35
2930 3335 1.040646 AGAAGCAGTTCCTGTGACGA 58.959 50.000 0.00 0.00 33.43 4.20
2931 3336 1.620819 AGAAGCAGTTCCTGTGACGAT 59.379 47.619 0.00 0.00 33.43 3.73
2932 3337 1.996191 GAAGCAGTTCCTGTGACGATC 59.004 52.381 0.00 0.00 33.43 3.69
2933 3338 0.969149 AGCAGTTCCTGTGACGATCA 59.031 50.000 0.00 0.00 33.43 2.92
2934 3339 6.871603 AGAAGCAGTTCCTGTGACGATCAC 62.872 50.000 10.12 10.12 39.46 3.06
2944 3349 3.452755 GTGACGATCACACCATATGGA 57.547 47.619 28.77 6.00 46.22 3.41
2945 3350 3.792401 GTGACGATCACACCATATGGAA 58.208 45.455 28.77 10.62 46.22 3.53
2946 3351 3.804325 GTGACGATCACACCATATGGAAG 59.196 47.826 28.77 20.64 46.22 3.46
2947 3352 2.802816 GACGATCACACCATATGGAAGC 59.197 50.000 28.77 11.69 38.94 3.86
2948 3353 2.146342 CGATCACACCATATGGAAGCC 58.854 52.381 28.77 10.42 38.94 4.35
2949 3354 2.146342 GATCACACCATATGGAAGCCG 58.854 52.381 28.77 13.86 38.94 5.52
2950 3355 0.908910 TCACACCATATGGAAGCCGT 59.091 50.000 28.77 13.08 38.94 5.68
2951 3356 1.280710 TCACACCATATGGAAGCCGTT 59.719 47.619 28.77 0.25 38.94 4.44
2952 3357 2.091541 CACACCATATGGAAGCCGTTT 58.908 47.619 28.77 0.00 38.94 3.60
2953 3358 2.091541 ACACCATATGGAAGCCGTTTG 58.908 47.619 28.77 15.05 38.94 2.93
2954 3359 1.405105 CACCATATGGAAGCCGTTTGG 59.595 52.381 28.77 11.95 43.91 3.28
2955 3360 1.283613 ACCATATGGAAGCCGTTTGGA 59.716 47.619 28.77 0.00 41.92 3.53
2956 3361 1.949525 CCATATGGAAGCCGTTTGGAG 59.050 52.381 17.49 0.00 41.92 3.86
2957 3362 1.949525 CATATGGAAGCCGTTTGGAGG 59.050 52.381 0.00 0.00 37.49 4.30
2958 3363 0.254747 TATGGAAGCCGTTTGGAGGG 59.745 55.000 0.00 0.00 37.49 4.30
2964 3369 3.074281 CCGTTTGGAGGGCCACTA 58.926 61.111 6.18 0.00 45.94 2.74
2965 3370 1.376812 CCGTTTGGAGGGCCACTAC 60.377 63.158 6.18 0.00 45.94 2.73
2966 3371 1.373435 CGTTTGGAGGGCCACTACA 59.627 57.895 6.18 3.09 45.94 2.74
2969 3374 3.737702 TTGGAGGGCCACTACAAAC 57.262 52.632 14.52 0.00 46.99 2.93
2970 3375 0.250553 TTGGAGGGCCACTACAAACG 60.251 55.000 14.52 0.00 46.99 3.60
2971 3376 2.038837 GGAGGGCCACTACAAACGC 61.039 63.158 6.18 0.00 0.00 4.84
2972 3377 1.003718 GAGGGCCACTACAAACGCT 60.004 57.895 6.18 0.00 0.00 5.07
2973 3378 0.248289 GAGGGCCACTACAAACGCTA 59.752 55.000 6.18 0.00 0.00 4.26
2974 3379 0.036671 AGGGCCACTACAAACGCTAC 60.037 55.000 6.18 0.00 0.00 3.58
2975 3380 1.356527 GGGCCACTACAAACGCTACG 61.357 60.000 4.39 0.00 0.00 3.51
2976 3381 0.668401 GGCCACTACAAACGCTACGT 60.668 55.000 0.00 0.00 43.97 3.57
2986 3391 2.908817 ACGCTACGTTTGGTTCAGG 58.091 52.632 0.00 0.00 36.35 3.86
2987 3392 1.226030 ACGCTACGTTTGGTTCAGGC 61.226 55.000 0.00 0.00 36.35 4.85
2988 3393 1.873863 GCTACGTTTGGTTCAGGCC 59.126 57.895 0.00 0.00 0.00 5.19
2989 3394 1.583495 GCTACGTTTGGTTCAGGCCC 61.583 60.000 0.00 0.00 0.00 5.80
2990 3395 1.296056 CTACGTTTGGTTCAGGCCCG 61.296 60.000 0.00 0.00 0.00 6.13
2991 3396 2.042404 TACGTTTGGTTCAGGCCCGT 62.042 55.000 0.00 0.25 0.00 5.28
2992 3397 1.301874 CGTTTGGTTCAGGCCCGTA 60.302 57.895 0.00 0.00 0.00 4.02
2993 3398 1.571215 CGTTTGGTTCAGGCCCGTAC 61.571 60.000 0.00 0.00 0.00 3.67
2994 3399 1.073548 TTTGGTTCAGGCCCGTACC 59.926 57.895 7.80 7.80 0.00 3.34
2995 3400 1.706995 TTTGGTTCAGGCCCGTACCA 61.707 55.000 13.13 13.13 38.82 3.25
2996 3401 2.119484 TTGGTTCAGGCCCGTACCAG 62.119 60.000 16.12 0.00 41.35 4.00
2997 3402 2.267961 GTTCAGGCCCGTACCAGG 59.732 66.667 0.00 0.00 0.00 4.45
3038 3443 3.579302 CACAGGGCCCCCACTTCA 61.579 66.667 21.43 0.00 38.92 3.02
3039 3444 3.260100 ACAGGGCCCCCACTTCAG 61.260 66.667 21.43 0.53 38.92 3.02
3040 3445 4.748144 CAGGGCCCCCACTTCAGC 62.748 72.222 21.43 0.00 38.92 4.26
3057 3462 4.060667 CGGGGCCCCCAAATCAGT 62.061 66.667 36.13 0.00 45.83 3.41
3058 3463 2.685534 CGGGGCCCCCAAATCAGTA 61.686 63.158 36.13 0.00 45.83 2.74
3059 3464 1.230212 GGGGCCCCCAAATCAGTAG 59.770 63.158 33.01 0.00 44.65 2.57
3060 3465 1.230212 GGGCCCCCAAATCAGTAGG 59.770 63.158 12.23 0.00 35.81 3.18
3061 3466 1.286305 GGGCCCCCAAATCAGTAGGA 61.286 60.000 12.23 0.00 35.81 2.94
3062 3467 0.629058 GGCCCCCAAATCAGTAGGAA 59.371 55.000 0.00 0.00 0.00 3.36
3063 3468 1.410224 GGCCCCCAAATCAGTAGGAAG 60.410 57.143 0.00 0.00 0.00 3.46
3064 3469 1.285078 GCCCCCAAATCAGTAGGAAGT 59.715 52.381 0.00 0.00 0.00 3.01
3065 3470 2.508300 GCCCCCAAATCAGTAGGAAGTA 59.492 50.000 0.00 0.00 0.00 2.24
3066 3471 3.684697 GCCCCCAAATCAGTAGGAAGTAC 60.685 52.174 0.00 0.00 0.00 2.73
3067 3472 3.521937 CCCCCAAATCAGTAGGAAGTACA 59.478 47.826 0.00 0.00 33.55 2.90
3068 3473 4.018779 CCCCCAAATCAGTAGGAAGTACAA 60.019 45.833 0.00 0.00 33.55 2.41
3069 3474 5.186198 CCCCAAATCAGTAGGAAGTACAAG 58.814 45.833 0.00 0.00 33.55 3.16
3070 3475 5.280521 CCCCAAATCAGTAGGAAGTACAAGT 60.281 44.000 0.00 0.00 33.55 3.16
3071 3476 6.070424 CCCCAAATCAGTAGGAAGTACAAGTA 60.070 42.308 0.00 0.00 33.55 2.24
3072 3477 7.391620 CCCAAATCAGTAGGAAGTACAAGTAA 58.608 38.462 0.00 0.00 33.55 2.24
3073 3478 8.047310 CCCAAATCAGTAGGAAGTACAAGTAAT 58.953 37.037 0.00 0.00 33.55 1.89
3074 3479 9.449719 CCAAATCAGTAGGAAGTACAAGTAATT 57.550 33.333 0.00 0.00 33.55 1.40
3080 3485 9.713740 CAGTAGGAAGTACAAGTAATTAGTACG 57.286 37.037 0.00 0.00 42.12 3.67
3081 3486 9.454859 AGTAGGAAGTACAAGTAATTAGTACGT 57.545 33.333 0.00 0.00 42.12 3.57
3094 3499 9.472361 AGTAATTAGTACGTATAAGCATTGGTG 57.528 33.333 0.00 0.00 37.81 4.17
3095 3500 7.724305 AATTAGTACGTATAAGCATTGGTGG 57.276 36.000 0.00 0.00 0.00 4.61
3096 3501 4.748277 AGTACGTATAAGCATTGGTGGT 57.252 40.909 0.00 0.00 37.76 4.16
3097 3502 5.093849 AGTACGTATAAGCATTGGTGGTT 57.906 39.130 0.00 0.00 46.85 3.67
3109 3514 8.721019 AAGCATTGGTGGTTAAATAATCAATG 57.279 30.769 11.97 11.97 43.75 2.82
3110 3515 7.850193 AGCATTGGTGGTTAAATAATCAATGT 58.150 30.769 15.36 5.55 40.87 2.71
3111 3516 8.320617 AGCATTGGTGGTTAAATAATCAATGTT 58.679 29.630 15.36 10.03 40.87 2.71
3112 3517 8.389603 GCATTGGTGGTTAAATAATCAATGTTG 58.610 33.333 15.36 0.00 40.87 3.33
3113 3518 8.881743 CATTGGTGGTTAAATAATCAATGTTGG 58.118 33.333 9.53 0.00 36.77 3.77
3114 3519 7.782897 TGGTGGTTAAATAATCAATGTTGGA 57.217 32.000 0.00 0.00 0.00 3.53
3115 3520 8.372877 TGGTGGTTAAATAATCAATGTTGGAT 57.627 30.769 0.00 0.00 0.00 3.41
3116 3521 8.256605 TGGTGGTTAAATAATCAATGTTGGATG 58.743 33.333 0.00 0.00 0.00 3.51
3117 3522 7.224557 GGTGGTTAAATAATCAATGTTGGATGC 59.775 37.037 0.00 0.00 0.00 3.91
3118 3523 7.763528 GTGGTTAAATAATCAATGTTGGATGCA 59.236 33.333 0.00 0.00 0.00 3.96
3119 3524 8.316946 TGGTTAAATAATCAATGTTGGATGCAA 58.683 29.630 0.00 0.00 0.00 4.08
3120 3525 9.328845 GGTTAAATAATCAATGTTGGATGCAAT 57.671 29.630 1.94 0.00 0.00 3.56
3122 3527 9.887629 TTAAATAATCAATGTTGGATGCAATGT 57.112 25.926 1.94 0.00 0.00 2.71
3124 3529 8.876275 AATAATCAATGTTGGATGCAATGTAC 57.124 30.769 1.94 0.00 0.00 2.90
3125 3530 4.354071 TCAATGTTGGATGCAATGTACG 57.646 40.909 1.94 0.00 0.00 3.67
3126 3531 4.006319 TCAATGTTGGATGCAATGTACGA 58.994 39.130 1.94 0.00 0.00 3.43
3127 3532 4.094739 TCAATGTTGGATGCAATGTACGAG 59.905 41.667 1.94 0.00 0.00 4.18
3128 3533 3.052455 TGTTGGATGCAATGTACGAGT 57.948 42.857 1.94 0.00 0.00 4.18
3129 3534 2.741517 TGTTGGATGCAATGTACGAGTG 59.258 45.455 1.94 0.00 0.00 3.51
3130 3535 1.368641 TGGATGCAATGTACGAGTGC 58.631 50.000 9.72 9.72 46.17 4.40
3131 3536 1.066215 TGGATGCAATGTACGAGTGCT 60.066 47.619 15.22 5.07 46.14 4.40
3132 3537 2.167487 TGGATGCAATGTACGAGTGCTA 59.833 45.455 15.22 6.08 46.14 3.49
3133 3538 2.540101 GGATGCAATGTACGAGTGCTAC 59.460 50.000 15.22 10.41 46.14 3.58
3134 3539 3.448686 GATGCAATGTACGAGTGCTACT 58.551 45.455 15.22 0.00 46.14 2.57
3135 3540 4.499188 GGATGCAATGTACGAGTGCTACTA 60.499 45.833 15.22 0.78 46.14 1.82
3136 3541 4.649088 TGCAATGTACGAGTGCTACTAT 57.351 40.909 15.22 0.00 46.14 2.12
3137 3542 5.006153 TGCAATGTACGAGTGCTACTATT 57.994 39.130 15.22 0.00 46.14 1.73
3138 3543 5.041287 TGCAATGTACGAGTGCTACTATTC 58.959 41.667 15.22 0.00 46.14 1.75
3139 3544 5.163550 TGCAATGTACGAGTGCTACTATTCT 60.164 40.000 15.22 0.00 46.14 2.40
3140 3545 5.399892 GCAATGTACGAGTGCTACTATTCTC 59.600 44.000 9.47 0.00 42.56 2.87
3141 3546 6.730175 CAATGTACGAGTGCTACTATTCTCT 58.270 40.000 0.00 0.00 0.00 3.10
3142 3547 7.520131 GCAATGTACGAGTGCTACTATTCTCTA 60.520 40.741 9.47 0.00 42.56 2.43
3143 3548 7.661127 ATGTACGAGTGCTACTATTCTCTAG 57.339 40.000 0.00 0.00 0.00 2.43
3144 3549 5.990386 TGTACGAGTGCTACTATTCTCTAGG 59.010 44.000 0.00 0.00 0.00 3.02
3145 3550 5.038651 ACGAGTGCTACTATTCTCTAGGT 57.961 43.478 0.00 0.00 0.00 3.08
3146 3551 6.172136 ACGAGTGCTACTATTCTCTAGGTA 57.828 41.667 0.00 0.00 0.00 3.08
3147 3552 6.590068 ACGAGTGCTACTATTCTCTAGGTAA 58.410 40.000 0.00 0.00 0.00 2.85
3148 3553 7.225725 ACGAGTGCTACTATTCTCTAGGTAAT 58.774 38.462 0.00 0.00 0.00 1.89
3149 3554 7.173562 ACGAGTGCTACTATTCTCTAGGTAATG 59.826 40.741 0.00 0.00 0.00 1.90
3150 3555 7.388224 CGAGTGCTACTATTCTCTAGGTAATGA 59.612 40.741 0.00 0.00 0.00 2.57
3151 3556 8.998277 AGTGCTACTATTCTCTAGGTAATGAA 57.002 34.615 0.00 0.00 0.00 2.57
3152 3557 9.422681 AGTGCTACTATTCTCTAGGTAATGAAA 57.577 33.333 0.00 0.00 0.00 2.69
3155 3560 9.478768 GCTACTATTCTCTAGGTAATGAAAACC 57.521 37.037 0.00 0.00 37.27 3.27
3156 3561 9.984190 CTACTATTCTCTAGGTAATGAAAACCC 57.016 37.037 0.00 0.00 37.77 4.11
3157 3562 8.388656 ACTATTCTCTAGGTAATGAAAACCCA 57.611 34.615 0.00 0.00 37.77 4.51
3158 3563 8.487028 ACTATTCTCTAGGTAATGAAAACCCAG 58.513 37.037 0.00 0.00 37.77 4.45
3159 3564 5.099042 TCTCTAGGTAATGAAAACCCAGC 57.901 43.478 0.00 0.00 37.77 4.85
3160 3565 4.080526 TCTCTAGGTAATGAAAACCCAGCC 60.081 45.833 0.00 0.00 37.77 4.85
3161 3566 2.990740 AGGTAATGAAAACCCAGCCA 57.009 45.000 0.00 0.00 37.77 4.75
3162 3567 3.252554 AGGTAATGAAAACCCAGCCAA 57.747 42.857 0.00 0.00 37.77 4.52
3163 3568 2.897326 AGGTAATGAAAACCCAGCCAAC 59.103 45.455 0.00 0.00 37.77 3.77
3164 3569 2.352323 GGTAATGAAAACCCAGCCAACG 60.352 50.000 0.00 0.00 0.00 4.10
3165 3570 1.698506 AATGAAAACCCAGCCAACGA 58.301 45.000 0.00 0.00 0.00 3.85
3166 3571 1.247567 ATGAAAACCCAGCCAACGAG 58.752 50.000 0.00 0.00 0.00 4.18
3167 3572 0.181587 TGAAAACCCAGCCAACGAGA 59.818 50.000 0.00 0.00 0.00 4.04
3168 3573 0.591659 GAAAACCCAGCCAACGAGAC 59.408 55.000 0.00 0.00 0.00 3.36
3169 3574 1.164041 AAAACCCAGCCAACGAGACG 61.164 55.000 0.00 0.00 0.00 4.18
3170 3575 4.681978 ACCCAGCCAACGAGACGC 62.682 66.667 0.00 0.00 0.00 5.19
3171 3576 4.379243 CCCAGCCAACGAGACGCT 62.379 66.667 0.00 0.00 0.00 5.07
3172 3577 2.811317 CCAGCCAACGAGACGCTC 60.811 66.667 0.00 0.00 0.00 5.03
3186 3591 3.821055 GCTCGCACGGCTCTCTCT 61.821 66.667 0.00 0.00 0.00 3.10
3187 3592 2.407210 CTCGCACGGCTCTCTCTC 59.593 66.667 0.00 0.00 0.00 3.20
3188 3593 2.359975 TCGCACGGCTCTCTCTCA 60.360 61.111 0.00 0.00 0.00 3.27
3189 3594 2.202544 CGCACGGCTCTCTCTCAC 60.203 66.667 0.00 0.00 0.00 3.51
3190 3595 2.695759 CGCACGGCTCTCTCTCACT 61.696 63.158 0.00 0.00 0.00 3.41
3191 3596 1.138671 GCACGGCTCTCTCTCACTC 59.861 63.158 0.00 0.00 0.00 3.51
3192 3597 1.312371 GCACGGCTCTCTCTCACTCT 61.312 60.000 0.00 0.00 0.00 3.24
3193 3598 1.173043 CACGGCTCTCTCTCACTCTT 58.827 55.000 0.00 0.00 0.00 2.85
3194 3599 1.132262 CACGGCTCTCTCTCACTCTTC 59.868 57.143 0.00 0.00 0.00 2.87
3195 3600 0.376852 CGGCTCTCTCTCACTCTTCG 59.623 60.000 0.00 0.00 0.00 3.79
3196 3601 1.459450 GGCTCTCTCTCACTCTTCGT 58.541 55.000 0.00 0.00 0.00 3.85
3197 3602 1.400494 GGCTCTCTCTCACTCTTCGTC 59.600 57.143 0.00 0.00 0.00 4.20
3198 3603 2.356135 GCTCTCTCTCACTCTTCGTCT 58.644 52.381 0.00 0.00 0.00 4.18
3199 3604 2.747446 GCTCTCTCTCACTCTTCGTCTT 59.253 50.000 0.00 0.00 0.00 3.01
3200 3605 3.181510 GCTCTCTCTCACTCTTCGTCTTC 60.182 52.174 0.00 0.00 0.00 2.87
3201 3606 3.340034 TCTCTCTCACTCTTCGTCTTCC 58.660 50.000 0.00 0.00 0.00 3.46
3202 3607 3.008594 TCTCTCTCACTCTTCGTCTTCCT 59.991 47.826 0.00 0.00 0.00 3.36
3203 3608 3.340034 TCTCTCACTCTTCGTCTTCCTC 58.660 50.000 0.00 0.00 0.00 3.71
3204 3609 2.422127 CTCTCACTCTTCGTCTTCCTCC 59.578 54.545 0.00 0.00 0.00 4.30
3205 3610 2.163509 CTCACTCTTCGTCTTCCTCCA 58.836 52.381 0.00 0.00 0.00 3.86
3206 3611 2.558795 CTCACTCTTCGTCTTCCTCCAA 59.441 50.000 0.00 0.00 0.00 3.53
3207 3612 2.296471 TCACTCTTCGTCTTCCTCCAAC 59.704 50.000 0.00 0.00 0.00 3.77
3208 3613 1.619332 ACTCTTCGTCTTCCTCCAACC 59.381 52.381 0.00 0.00 0.00 3.77
3209 3614 1.618837 CTCTTCGTCTTCCTCCAACCA 59.381 52.381 0.00 0.00 0.00 3.67
3210 3615 1.343465 TCTTCGTCTTCCTCCAACCAC 59.657 52.381 0.00 0.00 0.00 4.16
3211 3616 1.344763 CTTCGTCTTCCTCCAACCACT 59.655 52.381 0.00 0.00 0.00 4.00
3212 3617 0.679505 TCGTCTTCCTCCAACCACTG 59.320 55.000 0.00 0.00 0.00 3.66
3213 3618 0.393077 CGTCTTCCTCCAACCACTGT 59.607 55.000 0.00 0.00 0.00 3.55
3214 3619 1.605712 CGTCTTCCTCCAACCACTGTC 60.606 57.143 0.00 0.00 0.00 3.51
3215 3620 1.416401 GTCTTCCTCCAACCACTGTCA 59.584 52.381 0.00 0.00 0.00 3.58
3216 3621 1.416401 TCTTCCTCCAACCACTGTCAC 59.584 52.381 0.00 0.00 0.00 3.67
3217 3622 1.140852 CTTCCTCCAACCACTGTCACA 59.859 52.381 0.00 0.00 0.00 3.58
3218 3623 0.758734 TCCTCCAACCACTGTCACAG 59.241 55.000 2.22 2.22 37.52 3.66
3219 3624 0.469917 CCTCCAACCACTGTCACAGT 59.530 55.000 3.98 3.98 46.51 3.55
3220 3625 1.134098 CCTCCAACCACTGTCACAGTT 60.134 52.381 8.05 0.00 42.59 3.16
3221 3626 2.213499 CTCCAACCACTGTCACAGTTC 58.787 52.381 8.05 0.00 42.59 3.01
3222 3627 1.134220 TCCAACCACTGTCACAGTTCC 60.134 52.381 8.05 0.00 42.59 3.62
3223 3628 1.134098 CCAACCACTGTCACAGTTCCT 60.134 52.381 8.05 0.00 42.59 3.36
3224 3629 2.213499 CAACCACTGTCACAGTTCCTC 58.787 52.381 8.05 0.00 42.59 3.71
3225 3630 1.794714 ACCACTGTCACAGTTCCTCT 58.205 50.000 8.05 0.00 42.59 3.69
3226 3631 2.119495 ACCACTGTCACAGTTCCTCTT 58.881 47.619 8.05 0.00 42.59 2.85
3227 3632 2.505819 ACCACTGTCACAGTTCCTCTTT 59.494 45.455 8.05 0.00 42.59 2.52
3228 3633 3.134458 CCACTGTCACAGTTCCTCTTTC 58.866 50.000 8.05 0.00 42.59 2.62
3229 3634 3.181461 CCACTGTCACAGTTCCTCTTTCT 60.181 47.826 8.05 0.00 42.59 2.52
3230 3635 4.054671 CACTGTCACAGTTCCTCTTTCTC 58.945 47.826 8.05 0.00 42.59 2.87
3231 3636 3.706594 ACTGTCACAGTTCCTCTTTCTCA 59.293 43.478 3.98 0.00 42.59 3.27
3232 3637 4.162320 ACTGTCACAGTTCCTCTTTCTCAA 59.838 41.667 3.98 0.00 42.59 3.02
3233 3638 4.697514 TGTCACAGTTCCTCTTTCTCAAG 58.302 43.478 0.00 0.00 0.00 3.02
3234 3639 4.162320 TGTCACAGTTCCTCTTTCTCAAGT 59.838 41.667 0.00 0.00 0.00 3.16
3235 3640 4.747605 GTCACAGTTCCTCTTTCTCAAGTC 59.252 45.833 0.00 0.00 0.00 3.01
3236 3641 4.061596 CACAGTTCCTCTTTCTCAAGTCC 58.938 47.826 0.00 0.00 0.00 3.85
3237 3642 3.970640 ACAGTTCCTCTTTCTCAAGTCCT 59.029 43.478 0.00 0.00 0.00 3.85
3238 3643 5.011125 CACAGTTCCTCTTTCTCAAGTCCTA 59.989 44.000 0.00 0.00 0.00 2.94
3239 3644 5.602978 ACAGTTCCTCTTTCTCAAGTCCTAA 59.397 40.000 0.00 0.00 0.00 2.69
3240 3645 6.099845 ACAGTTCCTCTTTCTCAAGTCCTAAA 59.900 38.462 0.00 0.00 0.00 1.85
3241 3646 7.164803 CAGTTCCTCTTTCTCAAGTCCTAAAT 58.835 38.462 0.00 0.00 0.00 1.40
3242 3647 7.333174 CAGTTCCTCTTTCTCAAGTCCTAAATC 59.667 40.741 0.00 0.00 0.00 2.17
3243 3648 6.301169 TCCTCTTTCTCAAGTCCTAAATCC 57.699 41.667 0.00 0.00 0.00 3.01
3244 3649 6.026186 TCCTCTTTCTCAAGTCCTAAATCCT 58.974 40.000 0.00 0.00 0.00 3.24
3245 3650 6.155393 TCCTCTTTCTCAAGTCCTAAATCCTC 59.845 42.308 0.00 0.00 0.00 3.71
3246 3651 5.967088 TCTTTCTCAAGTCCTAAATCCTCG 58.033 41.667 0.00 0.00 0.00 4.63
3247 3652 5.480772 TCTTTCTCAAGTCCTAAATCCTCGT 59.519 40.000 0.00 0.00 0.00 4.18
3248 3653 6.662234 TCTTTCTCAAGTCCTAAATCCTCGTA 59.338 38.462 0.00 0.00 0.00 3.43
3249 3654 5.831702 TCTCAAGTCCTAAATCCTCGTAC 57.168 43.478 0.00 0.00 0.00 3.67
3250 3655 5.258841 TCTCAAGTCCTAAATCCTCGTACA 58.741 41.667 0.00 0.00 0.00 2.90
3251 3656 5.892119 TCTCAAGTCCTAAATCCTCGTACAT 59.108 40.000 0.00 0.00 0.00 2.29
3252 3657 6.039493 TCTCAAGTCCTAAATCCTCGTACATC 59.961 42.308 0.00 0.00 0.00 3.06
3253 3658 5.892119 TCAAGTCCTAAATCCTCGTACATCT 59.108 40.000 0.00 0.00 0.00 2.90
3254 3659 6.380274 TCAAGTCCTAAATCCTCGTACATCTT 59.620 38.462 0.00 0.00 0.00 2.40
3255 3660 6.394025 AGTCCTAAATCCTCGTACATCTTC 57.606 41.667 0.00 0.00 0.00 2.87
3256 3661 5.892119 AGTCCTAAATCCTCGTACATCTTCA 59.108 40.000 0.00 0.00 0.00 3.02
3257 3662 5.978322 GTCCTAAATCCTCGTACATCTTCAC 59.022 44.000 0.00 0.00 0.00 3.18
3258 3663 5.892119 TCCTAAATCCTCGTACATCTTCACT 59.108 40.000 0.00 0.00 0.00 3.41
3259 3664 6.039493 TCCTAAATCCTCGTACATCTTCACTC 59.961 42.308 0.00 0.00 0.00 3.51
3260 3665 4.657436 AATCCTCGTACATCTTCACTCC 57.343 45.455 0.00 0.00 0.00 3.85
3261 3666 3.367646 TCCTCGTACATCTTCACTCCT 57.632 47.619 0.00 0.00 0.00 3.69
3262 3667 3.698289 TCCTCGTACATCTTCACTCCTT 58.302 45.455 0.00 0.00 0.00 3.36
3263 3668 3.444034 TCCTCGTACATCTTCACTCCTTG 59.556 47.826 0.00 0.00 0.00 3.61
3264 3669 3.182967 CTCGTACATCTTCACTCCTTGC 58.817 50.000 0.00 0.00 0.00 4.01
3265 3670 2.826128 TCGTACATCTTCACTCCTTGCT 59.174 45.455 0.00 0.00 0.00 3.91
3266 3671 4.014406 TCGTACATCTTCACTCCTTGCTA 58.986 43.478 0.00 0.00 0.00 3.49
3267 3672 4.461431 TCGTACATCTTCACTCCTTGCTAA 59.539 41.667 0.00 0.00 0.00 3.09
3268 3673 5.127194 TCGTACATCTTCACTCCTTGCTAAT 59.873 40.000 0.00 0.00 0.00 1.73
3269 3674 5.233050 CGTACATCTTCACTCCTTGCTAATG 59.767 44.000 0.00 0.00 0.00 1.90
3270 3675 5.171339 ACATCTTCACTCCTTGCTAATGT 57.829 39.130 0.00 0.00 0.00 2.71
3271 3676 5.564550 ACATCTTCACTCCTTGCTAATGTT 58.435 37.500 0.00 0.00 0.00 2.71
3272 3677 5.645497 ACATCTTCACTCCTTGCTAATGTTC 59.355 40.000 0.00 0.00 0.00 3.18
3273 3678 4.579869 TCTTCACTCCTTGCTAATGTTCC 58.420 43.478 0.00 0.00 0.00 3.62
3274 3679 4.041567 TCTTCACTCCTTGCTAATGTTCCA 59.958 41.667 0.00 0.00 0.00 3.53
3275 3680 3.674997 TCACTCCTTGCTAATGTTCCAC 58.325 45.455 0.00 0.00 0.00 4.02
3276 3681 3.327757 TCACTCCTTGCTAATGTTCCACT 59.672 43.478 0.00 0.00 0.00 4.00
3277 3682 3.686726 CACTCCTTGCTAATGTTCCACTC 59.313 47.826 0.00 0.00 0.00 3.51
3278 3683 3.274288 CTCCTTGCTAATGTTCCACTCC 58.726 50.000 0.00 0.00 0.00 3.85
3279 3684 2.912956 TCCTTGCTAATGTTCCACTCCT 59.087 45.455 0.00 0.00 0.00 3.69
3280 3685 4.101114 TCCTTGCTAATGTTCCACTCCTA 58.899 43.478 0.00 0.00 0.00 2.94
3281 3686 4.534500 TCCTTGCTAATGTTCCACTCCTAA 59.466 41.667 0.00 0.00 0.00 2.69
3282 3687 5.191722 TCCTTGCTAATGTTCCACTCCTAAT 59.808 40.000 0.00 0.00 0.00 1.73
3283 3688 5.529060 CCTTGCTAATGTTCCACTCCTAATC 59.471 44.000 0.00 0.00 0.00 1.75
3284 3689 5.036117 TGCTAATGTTCCACTCCTAATCC 57.964 43.478 0.00 0.00 0.00 3.01
3285 3690 4.141482 TGCTAATGTTCCACTCCTAATCCC 60.141 45.833 0.00 0.00 0.00 3.85
3286 3691 4.103311 GCTAATGTTCCACTCCTAATCCCT 59.897 45.833 0.00 0.00 0.00 4.20
3287 3692 5.307196 GCTAATGTTCCACTCCTAATCCCTA 59.693 44.000 0.00 0.00 0.00 3.53
3288 3693 6.013293 GCTAATGTTCCACTCCTAATCCCTAT 60.013 42.308 0.00 0.00 0.00 2.57
3289 3694 7.180408 GCTAATGTTCCACTCCTAATCCCTATA 59.820 40.741 0.00 0.00 0.00 1.31
3290 3695 7.947782 AATGTTCCACTCCTAATCCCTATAA 57.052 36.000 0.00 0.00 0.00 0.98
3291 3696 8.525729 AATGTTCCACTCCTAATCCCTATAAT 57.474 34.615 0.00 0.00 0.00 1.28
3292 3697 7.947782 TGTTCCACTCCTAATCCCTATAATT 57.052 36.000 0.00 0.00 0.00 1.40
3293 3698 8.344939 TGTTCCACTCCTAATCCCTATAATTT 57.655 34.615 0.00 0.00 0.00 1.82
3294 3699 8.787818 TGTTCCACTCCTAATCCCTATAATTTT 58.212 33.333 0.00 0.00 0.00 1.82
3295 3700 9.642343 GTTCCACTCCTAATCCCTATAATTTTT 57.358 33.333 0.00 0.00 0.00 1.94
3296 3701 9.862149 TTCCACTCCTAATCCCTATAATTTTTC 57.138 33.333 0.00 0.00 0.00 2.29
3297 3702 8.154856 TCCACTCCTAATCCCTATAATTTTTCG 58.845 37.037 0.00 0.00 0.00 3.46
3298 3703 7.094762 CCACTCCTAATCCCTATAATTTTTCGC 60.095 40.741 0.00 0.00 0.00 4.70
3299 3704 6.649557 ACTCCTAATCCCTATAATTTTTCGCG 59.350 38.462 0.00 0.00 0.00 5.87
3300 3705 6.761312 TCCTAATCCCTATAATTTTTCGCGA 58.239 36.000 3.71 3.71 0.00 5.87
3301 3706 7.391620 TCCTAATCCCTATAATTTTTCGCGAT 58.608 34.615 10.88 0.00 0.00 4.58
3302 3707 7.881232 TCCTAATCCCTATAATTTTTCGCGATT 59.119 33.333 10.88 3.29 0.00 3.34
3303 3708 8.512138 CCTAATCCCTATAATTTTTCGCGATTT 58.488 33.333 10.88 4.47 0.00 2.17
3304 3709 9.543018 CTAATCCCTATAATTTTTCGCGATTTC 57.457 33.333 10.88 0.00 0.00 2.17
3305 3710 6.308371 TCCCTATAATTTTTCGCGATTTCC 57.692 37.500 10.88 0.00 0.00 3.13
3306 3711 5.239963 TCCCTATAATTTTTCGCGATTTCCC 59.760 40.000 10.88 0.00 0.00 3.97
3307 3712 5.458015 CCTATAATTTTTCGCGATTTCCCC 58.542 41.667 10.88 0.00 0.00 4.81
3308 3713 5.240844 CCTATAATTTTTCGCGATTTCCCCT 59.759 40.000 10.88 0.00 0.00 4.79
3309 3714 3.503827 AATTTTTCGCGATTTCCCCTC 57.496 42.857 10.88 0.00 0.00 4.30
3310 3715 1.898902 TTTTTCGCGATTTCCCCTCA 58.101 45.000 10.88 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.128692 CGTTGCCTTGAAATCCTCGTC 59.871 52.381 0.00 0.00 0.00 4.20
101 102 7.850935 TGATCGAAGGAAGGTAAGGTATAAT 57.149 36.000 0.00 0.00 0.00 1.28
284 553 4.867086 AGGGAGTTGGTAAATATGGTTGG 58.133 43.478 0.00 0.00 0.00 3.77
318 587 5.291858 TCACGTGAGAATACTGATTGCATTC 59.708 40.000 15.76 1.55 0.00 2.67
486 755 7.220740 CAACCATTTTATTTAGGGGTTGTTGT 58.779 34.615 12.01 0.00 46.24 3.32
691 975 8.212317 ACTTCTGTTTCAAAATTTTGGATTGG 57.788 30.769 26.45 15.75 38.66 3.16
720 1005 2.210013 TGTGCGGCCAGAGAGAGTT 61.210 57.895 2.24 0.00 0.00 3.01
730 1015 1.135689 CAAATAAGAGTGTGTGCGGCC 60.136 52.381 0.00 0.00 0.00 6.13
811 1107 2.859951 AGGAGGGCCAGTAATTAACCT 58.140 47.619 6.18 0.00 36.29 3.50
1085 1391 7.778083 TGAGCCGATAAACAGAAGTAGAATAA 58.222 34.615 0.00 0.00 0.00 1.40
1311 1623 6.480285 CAAAATTCCTTTGTATACGGTACCG 58.520 40.000 32.22 32.22 39.75 4.02
1824 2137 7.331193 ACAAGAACTACTCCAAAGCTATAAACG 59.669 37.037 0.00 0.00 0.00 3.60
2247 2565 2.287909 GCAAGACTATCGAGGGTAGCTG 60.288 54.545 0.00 0.00 0.00 4.24
2393 2798 6.734104 ACTTCACTGATAGAAACTGATTGC 57.266 37.500 0.00 0.00 0.00 3.56
2400 2805 8.988064 TCAGTATCAACTTCACTGATAGAAAC 57.012 34.615 0.00 0.00 42.75 2.78
2471 2876 7.205737 TCGTAAGCGATATGTATACCTTGAA 57.794 36.000 0.00 0.00 42.81 2.69
2480 2885 3.119602 GGCATCCTCGTAAGCGATATGTA 60.120 47.826 11.37 0.00 46.80 2.29
2487 2892 1.004277 GATCGGCATCCTCGTAAGCG 61.004 60.000 0.00 0.00 39.92 4.68
2489 2894 0.387367 CCGATCGGCATCCTCGTAAG 60.387 60.000 23.37 0.00 0.00 2.34
2493 2898 2.256764 CTCCGATCGGCATCCTCG 59.743 66.667 29.62 3.14 34.68 4.63
2496 2901 0.888619 TATGTCTCCGATCGGCATCC 59.111 55.000 29.62 16.22 34.68 3.51
2498 2903 0.244994 GCTATGTCTCCGATCGGCAT 59.755 55.000 29.62 25.94 34.68 4.40
2499 2904 0.823769 AGCTATGTCTCCGATCGGCA 60.824 55.000 29.62 21.24 34.68 5.69
2507 2912 1.269831 CCCGCACTTAGCTATGTCTCC 60.270 57.143 9.22 1.52 42.61 3.71
2525 2930 0.749091 AAATTAGCGCCCGTTACCCC 60.749 55.000 2.29 0.00 0.00 4.95
2528 2933 4.863152 TCTAAAAATTAGCGCCCGTTAC 57.137 40.909 2.29 0.00 0.00 2.50
2535 2940 6.856426 AGTGTCAACTTTCTAAAAATTAGCGC 59.144 34.615 0.00 0.00 30.14 5.92
2562 2967 0.586319 CAATGTCACGCCGAAACTGT 59.414 50.000 0.00 0.00 0.00 3.55
2569 2974 2.324330 TTCCAGCAATGTCACGCCG 61.324 57.895 0.00 0.00 0.00 6.46
2572 2977 0.439985 CGAGTTCCAGCAATGTCACG 59.560 55.000 0.00 0.00 0.00 4.35
2574 2979 1.795768 GACGAGTTCCAGCAATGTCA 58.204 50.000 0.00 0.00 0.00 3.58
2578 2983 2.094659 CGCGACGAGTTCCAGCAAT 61.095 57.895 0.00 0.00 0.00 3.56
2596 3001 1.304381 TTCATTGGCCACCTGCTCC 60.304 57.895 3.88 0.00 40.92 4.70
2598 3003 1.980772 GCTTCATTGGCCACCTGCT 60.981 57.895 3.88 0.00 40.92 4.24
2601 3006 1.304713 CCAGCTTCATTGGCCACCT 60.305 57.895 3.88 0.00 0.00 4.00
2619 3024 2.288666 TCGCCAAATTACCATCAGCTC 58.711 47.619 0.00 0.00 0.00 4.09
2621 3026 3.715628 AATCGCCAAATTACCATCAGC 57.284 42.857 0.00 0.00 0.00 4.26
2638 3043 4.037446 TCAGTTAAGTTGTGCACCCAAATC 59.963 41.667 15.69 0.00 0.00 2.17
2646 3051 7.308529 CCATGTATTTCTCAGTTAAGTTGTGCA 60.309 37.037 0.00 0.00 0.00 4.57
2656 3061 5.762179 TGTCCTCCATGTATTTCTCAGTT 57.238 39.130 0.00 0.00 0.00 3.16
2664 3069 4.104086 TCTCCAGTTGTCCTCCATGTATT 58.896 43.478 0.00 0.00 0.00 1.89
2665 3070 3.724478 TCTCCAGTTGTCCTCCATGTAT 58.276 45.455 0.00 0.00 0.00 2.29
2666 3071 3.184382 TCTCCAGTTGTCCTCCATGTA 57.816 47.619 0.00 0.00 0.00 2.29
2667 3072 2.030027 TCTCCAGTTGTCCTCCATGT 57.970 50.000 0.00 0.00 0.00 3.21
2668 3073 2.304180 ACTTCTCCAGTTGTCCTCCATG 59.696 50.000 0.00 0.00 27.32 3.66
2669 3074 2.625639 ACTTCTCCAGTTGTCCTCCAT 58.374 47.619 0.00 0.00 27.32 3.41
2670 3075 2.103153 ACTTCTCCAGTTGTCCTCCA 57.897 50.000 0.00 0.00 27.32 3.86
2671 3076 2.368875 TGAACTTCTCCAGTTGTCCTCC 59.631 50.000 0.00 0.00 46.53 4.30
2672 3077 3.753294 TGAACTTCTCCAGTTGTCCTC 57.247 47.619 0.00 0.00 46.53 3.71
2675 3080 4.509600 CACTCTTGAACTTCTCCAGTTGTC 59.490 45.833 0.00 0.00 46.53 3.18
2680 3085 7.555087 AGATATTCACTCTTGAACTTCTCCAG 58.445 38.462 0.00 0.00 44.66 3.86
2699 3104 7.418254 GGAAAGCCATTTTCACATGGAGATATT 60.418 37.037 3.80 0.00 46.18 1.28
2700 3105 6.041296 GGAAAGCCATTTTCACATGGAGATAT 59.959 38.462 3.80 0.00 46.18 1.63
2701 3106 5.360714 GGAAAGCCATTTTCACATGGAGATA 59.639 40.000 3.80 0.00 46.18 1.98
2702 3107 4.161001 GGAAAGCCATTTTCACATGGAGAT 59.839 41.667 3.80 0.00 46.18 2.75
2703 3108 3.511146 GGAAAGCCATTTTCACATGGAGA 59.489 43.478 3.80 0.00 46.18 3.71
2704 3109 3.674138 CGGAAAGCCATTTTCACATGGAG 60.674 47.826 3.80 0.00 46.18 3.86
2705 3110 2.230992 CGGAAAGCCATTTTCACATGGA 59.769 45.455 3.80 0.00 46.18 3.41
2707 3112 3.574284 TCGGAAAGCCATTTTCACATG 57.426 42.857 0.00 0.00 45.70 3.21
2709 3114 2.491693 GGATCGGAAAGCCATTTTCACA 59.508 45.455 2.52 0.00 45.70 3.58
2711 3116 2.099405 GGGATCGGAAAGCCATTTTCA 58.901 47.619 2.52 0.00 45.70 2.69
2712 3117 2.099405 TGGGATCGGAAAGCCATTTTC 58.901 47.619 0.00 0.00 43.64 2.29
2713 3118 2.102578 CTGGGATCGGAAAGCCATTTT 58.897 47.619 0.00 0.00 0.00 1.82
2714 3119 1.284785 TCTGGGATCGGAAAGCCATTT 59.715 47.619 0.00 0.00 0.00 2.32
2715 3120 0.918983 TCTGGGATCGGAAAGCCATT 59.081 50.000 0.00 0.00 0.00 3.16
2716 3121 1.072965 GATCTGGGATCGGAAAGCCAT 59.927 52.381 0.00 0.00 0.00 4.40
2717 3122 0.469917 GATCTGGGATCGGAAAGCCA 59.530 55.000 0.00 0.00 0.00 4.75
2718 3123 0.469917 TGATCTGGGATCGGAAAGCC 59.530 55.000 0.00 0.00 0.00 4.35
2719 3124 2.332063 TTGATCTGGGATCGGAAAGC 57.668 50.000 0.00 0.00 0.00 3.51
2720 3125 2.609459 CGTTTGATCTGGGATCGGAAAG 59.391 50.000 0.00 1.04 0.00 2.62
2721 3126 2.627945 CGTTTGATCTGGGATCGGAAA 58.372 47.619 0.00 0.00 0.00 3.13
2722 3127 1.742411 GCGTTTGATCTGGGATCGGAA 60.742 52.381 0.00 0.00 0.00 4.30
2723 3128 0.179084 GCGTTTGATCTGGGATCGGA 60.179 55.000 0.00 0.00 0.00 4.55
2724 3129 1.490693 CGCGTTTGATCTGGGATCGG 61.491 60.000 0.00 0.00 0.00 4.18
2725 3130 1.490693 CCGCGTTTGATCTGGGATCG 61.491 60.000 4.92 0.00 0.00 3.69
2726 3131 0.462047 ACCGCGTTTGATCTGGGATC 60.462 55.000 4.92 1.04 0.00 3.36
2739 3144 1.327690 ATGTCCTCCATGTACCGCGT 61.328 55.000 4.92 0.00 30.69 6.01
2768 3173 2.811873 GCAATCGATACCCAGCCTGAAT 60.812 50.000 0.00 0.00 0.00 2.57
2780 3185 0.462937 CCACAACGGGGCAATCGATA 60.463 55.000 0.00 0.00 0.00 2.92
2781 3186 1.748879 CCACAACGGGGCAATCGAT 60.749 57.895 0.00 0.00 0.00 3.59
2783 3188 1.714899 GATCCACAACGGGGCAATCG 61.715 60.000 0.00 0.00 34.36 3.34
2790 3195 2.819595 CTGCGGATCCACAACGGG 60.820 66.667 13.41 0.00 34.36 5.28
2803 3208 2.420568 ATGGATGGCCTTTGCTGCG 61.421 57.895 3.32 0.00 37.74 5.18
2836 3241 3.919216 CAGAATGTCTCCAAGAGTCGTT 58.081 45.455 0.00 0.00 31.79 3.85
2844 3249 5.412594 GCAGAATGTAACAGAATGTCTCCAA 59.587 40.000 0.00 0.00 46.16 3.53
2845 3250 4.937620 GCAGAATGTAACAGAATGTCTCCA 59.062 41.667 0.00 0.00 46.16 3.86
2846 3251 4.937620 TGCAGAATGTAACAGAATGTCTCC 59.062 41.667 0.00 0.00 46.16 3.71
2847 3252 6.314648 TCATGCAGAATGTAACAGAATGTCTC 59.685 38.462 0.00 0.00 46.16 3.36
2848 3253 6.175471 TCATGCAGAATGTAACAGAATGTCT 58.825 36.000 0.00 0.00 46.16 3.41
2849 3254 6.426980 TCATGCAGAATGTAACAGAATGTC 57.573 37.500 0.00 0.00 46.16 3.06
2851 3256 6.262496 AGGATCATGCAGAATGTAACAGAATG 59.738 38.462 0.00 0.00 40.30 2.67
2852 3257 6.363065 AGGATCATGCAGAATGTAACAGAAT 58.637 36.000 0.00 0.00 39.31 2.40
2853 3258 5.748402 AGGATCATGCAGAATGTAACAGAA 58.252 37.500 0.00 0.00 39.31 3.02
2854 3259 5.363562 AGGATCATGCAGAATGTAACAGA 57.636 39.130 0.00 0.00 39.31 3.41
2855 3260 5.468072 GGTAGGATCATGCAGAATGTAACAG 59.532 44.000 0.00 0.00 39.31 3.16
2856 3261 5.368145 GGTAGGATCATGCAGAATGTAACA 58.632 41.667 0.00 0.00 39.31 2.41
2857 3262 4.449068 CGGTAGGATCATGCAGAATGTAAC 59.551 45.833 0.00 0.00 39.31 2.50
2858 3263 4.631131 CGGTAGGATCATGCAGAATGTAA 58.369 43.478 0.00 0.00 39.31 2.41
2859 3264 3.554960 GCGGTAGGATCATGCAGAATGTA 60.555 47.826 0.00 0.00 39.31 2.29
2860 3265 2.808202 GCGGTAGGATCATGCAGAATGT 60.808 50.000 0.00 0.00 39.31 2.71
2861 3266 1.802960 GCGGTAGGATCATGCAGAATG 59.197 52.381 0.00 0.00 40.87 2.67
2862 3267 1.417517 TGCGGTAGGATCATGCAGAAT 59.582 47.619 0.00 0.00 0.00 2.40
2863 3268 0.829990 TGCGGTAGGATCATGCAGAA 59.170 50.000 0.00 0.00 0.00 3.02
2864 3269 0.829990 TTGCGGTAGGATCATGCAGA 59.170 50.000 0.00 0.00 36.83 4.26
2865 3270 1.600957 CTTTGCGGTAGGATCATGCAG 59.399 52.381 0.00 0.00 36.83 4.41
2866 3271 1.065491 ACTTTGCGGTAGGATCATGCA 60.065 47.619 0.00 0.00 0.00 3.96
2867 3272 1.668419 ACTTTGCGGTAGGATCATGC 58.332 50.000 0.00 0.00 0.00 4.06
2868 3273 3.535561 AGAACTTTGCGGTAGGATCATG 58.464 45.455 0.00 0.00 0.00 3.07
2869 3274 3.914426 AGAACTTTGCGGTAGGATCAT 57.086 42.857 0.00 0.00 0.00 2.45
2870 3275 3.596214 GAAGAACTTTGCGGTAGGATCA 58.404 45.455 0.00 0.00 0.00 2.92
2871 3276 2.937149 GGAAGAACTTTGCGGTAGGATC 59.063 50.000 0.00 0.00 0.00 3.36
2872 3277 2.304761 TGGAAGAACTTTGCGGTAGGAT 59.695 45.455 0.00 0.00 0.00 3.24
2873 3278 1.695242 TGGAAGAACTTTGCGGTAGGA 59.305 47.619 0.00 0.00 0.00 2.94
2874 3279 2.178912 TGGAAGAACTTTGCGGTAGG 57.821 50.000 0.00 0.00 0.00 3.18
2875 3280 3.334691 TCATGGAAGAACTTTGCGGTAG 58.665 45.455 0.00 0.00 0.00 3.18
2876 3281 3.007506 TCTCATGGAAGAACTTTGCGGTA 59.992 43.478 0.00 0.00 0.00 4.02
2877 3282 2.154462 CTCATGGAAGAACTTTGCGGT 58.846 47.619 0.00 0.00 0.00 5.68
2878 3283 2.426522 TCTCATGGAAGAACTTTGCGG 58.573 47.619 0.00 0.00 0.00 5.69
2886 3291 5.168569 GTCATACGTGTTCTCATGGAAGAA 58.831 41.667 0.00 0.00 34.23 2.52
2887 3292 4.381612 GGTCATACGTGTTCTCATGGAAGA 60.382 45.833 0.00 0.00 34.23 2.87
2888 3293 3.865745 GGTCATACGTGTTCTCATGGAAG 59.134 47.826 0.00 0.00 34.23 3.46
2889 3294 3.259625 TGGTCATACGTGTTCTCATGGAA 59.740 43.478 0.00 0.00 35.12 3.53
2890 3295 2.829120 TGGTCATACGTGTTCTCATGGA 59.171 45.455 0.00 0.00 35.12 3.41
2891 3296 3.119137 TCTGGTCATACGTGTTCTCATGG 60.119 47.826 0.00 0.00 35.12 3.66
2892 3297 4.110036 TCTGGTCATACGTGTTCTCATG 57.890 45.455 0.00 0.00 36.71 3.07
2893 3298 4.748892 CTTCTGGTCATACGTGTTCTCAT 58.251 43.478 0.00 0.00 0.00 2.90
2894 3299 3.614150 GCTTCTGGTCATACGTGTTCTCA 60.614 47.826 0.00 0.00 0.00 3.27
2895 3300 2.924290 GCTTCTGGTCATACGTGTTCTC 59.076 50.000 0.00 0.00 0.00 2.87
2896 3301 2.299013 TGCTTCTGGTCATACGTGTTCT 59.701 45.455 0.00 0.00 0.00 3.01
2897 3302 2.668457 CTGCTTCTGGTCATACGTGTTC 59.332 50.000 0.00 0.00 0.00 3.18
2898 3303 2.037251 ACTGCTTCTGGTCATACGTGTT 59.963 45.455 0.00 0.00 0.00 3.32
2899 3304 1.618837 ACTGCTTCTGGTCATACGTGT 59.381 47.619 0.00 0.00 0.00 4.49
2900 3305 2.370281 ACTGCTTCTGGTCATACGTG 57.630 50.000 0.00 0.00 0.00 4.49
2901 3306 2.353803 GGAACTGCTTCTGGTCATACGT 60.354 50.000 0.00 0.00 0.00 3.57
2902 3307 2.093973 AGGAACTGCTTCTGGTCATACG 60.094 50.000 0.00 0.00 37.18 3.06
2903 3308 3.618690 AGGAACTGCTTCTGGTCATAC 57.381 47.619 0.00 0.00 37.18 2.39
2925 3330 3.741075 GCTTCCATATGGTGTGATCGTCA 60.741 47.826 21.28 0.00 36.34 4.35
2926 3331 2.802816 GCTTCCATATGGTGTGATCGTC 59.197 50.000 21.28 0.00 36.34 4.20
2927 3332 2.485479 GGCTTCCATATGGTGTGATCGT 60.485 50.000 21.28 0.00 36.34 3.73
2928 3333 2.146342 GGCTTCCATATGGTGTGATCG 58.854 52.381 21.28 4.83 36.34 3.69
2929 3334 2.146342 CGGCTTCCATATGGTGTGATC 58.854 52.381 21.28 6.99 36.34 2.92
2930 3335 1.490490 ACGGCTTCCATATGGTGTGAT 59.510 47.619 21.28 1.85 36.34 3.06
2931 3336 0.908910 ACGGCTTCCATATGGTGTGA 59.091 50.000 21.28 0.00 36.34 3.58
2932 3337 1.750193 AACGGCTTCCATATGGTGTG 58.250 50.000 21.28 13.02 36.34 3.82
2933 3338 2.091541 CAAACGGCTTCCATATGGTGT 58.908 47.619 21.28 10.34 36.34 4.16
2934 3339 1.405105 CCAAACGGCTTCCATATGGTG 59.595 52.381 21.28 15.64 36.34 4.17
2935 3340 1.283613 TCCAAACGGCTTCCATATGGT 59.716 47.619 21.28 0.00 36.34 3.55
2936 3341 1.949525 CTCCAAACGGCTTCCATATGG 59.050 52.381 16.25 16.25 0.00 2.74
2937 3342 1.949525 CCTCCAAACGGCTTCCATATG 59.050 52.381 0.00 0.00 0.00 1.78
2938 3343 1.133792 CCCTCCAAACGGCTTCCATAT 60.134 52.381 0.00 0.00 0.00 1.78
2939 3344 0.254747 CCCTCCAAACGGCTTCCATA 59.745 55.000 0.00 0.00 0.00 2.74
2940 3345 1.000896 CCCTCCAAACGGCTTCCAT 60.001 57.895 0.00 0.00 0.00 3.41
2941 3346 2.434331 CCCTCCAAACGGCTTCCA 59.566 61.111 0.00 0.00 0.00 3.53
2942 3347 3.062466 GCCCTCCAAACGGCTTCC 61.062 66.667 0.00 0.00 42.21 3.46
2943 3348 3.062466 GGCCCTCCAAACGGCTTC 61.062 66.667 0.00 0.00 45.01 3.86
2944 3349 3.897122 TGGCCCTCCAAACGGCTT 61.897 61.111 0.00 0.00 45.01 4.35
2945 3350 4.660938 GTGGCCCTCCAAACGGCT 62.661 66.667 0.00 0.00 45.53 5.52
2946 3351 3.262448 TAGTGGCCCTCCAAACGGC 62.262 63.158 0.00 0.00 45.53 5.68
2947 3352 1.376812 GTAGTGGCCCTCCAAACGG 60.377 63.158 0.00 0.00 45.53 4.44
2948 3353 0.250553 TTGTAGTGGCCCTCCAAACG 60.251 55.000 0.00 0.00 45.53 3.60
2949 3354 1.611977 GTTTGTAGTGGCCCTCCAAAC 59.388 52.381 19.21 19.21 45.53 2.93
2950 3355 1.816183 CGTTTGTAGTGGCCCTCCAAA 60.816 52.381 0.00 4.05 45.53 3.28
2951 3356 0.250553 CGTTTGTAGTGGCCCTCCAA 60.251 55.000 0.00 0.00 45.53 3.53
2952 3357 1.373435 CGTTTGTAGTGGCCCTCCA 59.627 57.895 0.00 0.00 40.85 3.86
2953 3358 2.038837 GCGTTTGTAGTGGCCCTCC 61.039 63.158 0.00 0.00 0.00 4.30
2954 3359 0.248289 TAGCGTTTGTAGTGGCCCTC 59.752 55.000 0.00 0.00 0.00 4.30
2955 3360 0.036671 GTAGCGTTTGTAGTGGCCCT 60.037 55.000 0.00 0.00 0.00 5.19
2956 3361 1.356527 CGTAGCGTTTGTAGTGGCCC 61.357 60.000 0.00 0.00 0.00 5.80
2957 3362 0.668401 ACGTAGCGTTTGTAGTGGCC 60.668 55.000 0.00 0.00 36.35 5.36
2958 3363 2.818350 ACGTAGCGTTTGTAGTGGC 58.182 52.632 0.00 0.00 36.35 5.01
2968 3373 1.226030 GCCTGAACCAAACGTAGCGT 61.226 55.000 0.00 0.00 43.97 5.07
2969 3374 1.495951 GCCTGAACCAAACGTAGCG 59.504 57.895 0.00 0.00 0.00 4.26
2970 3375 1.583495 GGGCCTGAACCAAACGTAGC 61.583 60.000 0.84 0.00 0.00 3.58
2971 3376 1.296056 CGGGCCTGAACCAAACGTAG 61.296 60.000 5.28 0.00 0.00 3.51
2972 3377 1.301874 CGGGCCTGAACCAAACGTA 60.302 57.895 5.28 0.00 0.00 3.57
2973 3378 2.042404 TACGGGCCTGAACCAAACGT 62.042 55.000 21.41 11.02 36.93 3.99
2974 3379 1.301874 TACGGGCCTGAACCAAACG 60.302 57.895 21.41 4.38 0.00 3.60
2975 3380 1.239296 GGTACGGGCCTGAACCAAAC 61.239 60.000 21.41 6.02 32.04 2.93
2976 3381 1.073548 GGTACGGGCCTGAACCAAA 59.926 57.895 21.41 0.00 32.04 3.28
2977 3382 2.119484 CTGGTACGGGCCTGAACCAA 62.119 60.000 21.41 5.86 41.30 3.67
2978 3383 2.527123 TGGTACGGGCCTGAACCA 60.527 61.111 21.41 18.39 39.66 3.67
2979 3384 2.267961 CTGGTACGGGCCTGAACC 59.732 66.667 21.41 15.86 0.00 3.62
2988 3393 2.325082 GCACAGTTGCCTGGTACGG 61.325 63.158 0.00 0.00 43.66 4.02
2989 3394 3.253955 GCACAGTTGCCTGGTACG 58.746 61.111 0.00 0.00 43.66 3.67
2998 3403 2.723746 GCACACCCTGCACAGTTG 59.276 61.111 0.00 0.00 46.29 3.16
3021 3426 3.574074 CTGAAGTGGGGGCCCTGTG 62.574 68.421 24.38 2.23 36.94 3.66
3022 3427 3.260100 CTGAAGTGGGGGCCCTGT 61.260 66.667 24.38 4.00 36.94 4.00
3023 3428 4.748144 GCTGAAGTGGGGGCCCTG 62.748 72.222 24.38 5.38 36.94 4.45
3041 3446 1.230212 CTACTGATTTGGGGGCCCC 59.770 63.158 36.02 36.02 45.71 5.80
3042 3447 1.230212 CCTACTGATTTGGGGGCCC 59.770 63.158 15.76 15.76 0.00 5.80
3043 3448 0.629058 TTCCTACTGATTTGGGGGCC 59.371 55.000 0.00 0.00 0.00 5.80
3044 3449 1.285078 ACTTCCTACTGATTTGGGGGC 59.715 52.381 0.00 0.00 0.00 5.80
3045 3450 3.521937 TGTACTTCCTACTGATTTGGGGG 59.478 47.826 0.00 0.00 0.00 5.40
3046 3451 4.837093 TGTACTTCCTACTGATTTGGGG 57.163 45.455 0.00 0.00 0.00 4.96
3047 3452 5.805728 ACTTGTACTTCCTACTGATTTGGG 58.194 41.667 0.00 0.00 0.00 4.12
3048 3453 9.449719 AATTACTTGTACTTCCTACTGATTTGG 57.550 33.333 0.00 0.00 0.00 3.28
3054 3459 9.713740 CGTACTAATTACTTGTACTTCCTACTG 57.286 37.037 10.20 0.00 35.67 2.74
3055 3460 9.454859 ACGTACTAATTACTTGTACTTCCTACT 57.545 33.333 10.20 0.00 35.67 2.57
3068 3473 9.472361 CACCAATGCTTATACGTACTAATTACT 57.528 33.333 0.00 0.00 0.00 2.24
3069 3474 8.706035 CCACCAATGCTTATACGTACTAATTAC 58.294 37.037 0.00 0.00 0.00 1.89
3070 3475 8.423349 ACCACCAATGCTTATACGTACTAATTA 58.577 33.333 0.00 0.00 0.00 1.40
3071 3476 7.277396 ACCACCAATGCTTATACGTACTAATT 58.723 34.615 0.00 0.00 0.00 1.40
3072 3477 6.823497 ACCACCAATGCTTATACGTACTAAT 58.177 36.000 0.00 0.00 0.00 1.73
3073 3478 6.224665 ACCACCAATGCTTATACGTACTAA 57.775 37.500 0.00 0.00 0.00 2.24
3074 3479 5.857471 ACCACCAATGCTTATACGTACTA 57.143 39.130 0.00 0.00 0.00 1.82
3075 3480 4.748277 ACCACCAATGCTTATACGTACT 57.252 40.909 0.00 0.00 0.00 2.73
3076 3481 6.907206 TTAACCACCAATGCTTATACGTAC 57.093 37.500 0.00 0.00 0.00 3.67
3077 3482 9.610705 TTATTTAACCACCAATGCTTATACGTA 57.389 29.630 0.00 0.00 0.00 3.57
3078 3483 8.508883 TTATTTAACCACCAATGCTTATACGT 57.491 30.769 0.00 0.00 0.00 3.57
3079 3484 9.607285 GATTATTTAACCACCAATGCTTATACG 57.393 33.333 0.00 0.00 0.00 3.06
3083 3488 9.814899 CATTGATTATTTAACCACCAATGCTTA 57.185 29.630 0.00 0.00 34.95 3.09
3084 3489 8.320617 ACATTGATTATTTAACCACCAATGCTT 58.679 29.630 0.00 0.00 41.54 3.91
3085 3490 7.850193 ACATTGATTATTTAACCACCAATGCT 58.150 30.769 0.00 0.00 41.54 3.79
3086 3491 8.389603 CAACATTGATTATTTAACCACCAATGC 58.610 33.333 0.00 0.00 41.54 3.56
3087 3492 8.881743 CCAACATTGATTATTTAACCACCAATG 58.118 33.333 0.00 0.00 42.72 2.82
3088 3493 8.820831 TCCAACATTGATTATTTAACCACCAAT 58.179 29.630 0.00 0.00 0.00 3.16
3089 3494 8.195165 TCCAACATTGATTATTTAACCACCAA 57.805 30.769 0.00 0.00 0.00 3.67
3090 3495 7.782897 TCCAACATTGATTATTTAACCACCA 57.217 32.000 0.00 0.00 0.00 4.17
3091 3496 7.224557 GCATCCAACATTGATTATTTAACCACC 59.775 37.037 0.00 0.00 0.00 4.61
3092 3497 7.763528 TGCATCCAACATTGATTATTTAACCAC 59.236 33.333 0.00 0.00 0.00 4.16
3093 3498 7.845037 TGCATCCAACATTGATTATTTAACCA 58.155 30.769 0.00 0.00 0.00 3.67
3094 3499 8.715191 TTGCATCCAACATTGATTATTTAACC 57.285 30.769 0.00 0.00 0.00 2.85
3096 3501 9.887629 ACATTGCATCCAACATTGATTATTTAA 57.112 25.926 0.00 0.00 32.95 1.52
3098 3503 9.316730 GTACATTGCATCCAACATTGATTATTT 57.683 29.630 0.00 0.00 32.95 1.40
3099 3504 7.648908 CGTACATTGCATCCAACATTGATTATT 59.351 33.333 0.00 0.00 32.95 1.40
3100 3505 7.013178 TCGTACATTGCATCCAACATTGATTAT 59.987 33.333 0.00 0.00 32.95 1.28
3101 3506 6.317391 TCGTACATTGCATCCAACATTGATTA 59.683 34.615 0.00 0.00 32.95 1.75
3102 3507 5.125257 TCGTACATTGCATCCAACATTGATT 59.875 36.000 0.00 0.00 32.95 2.57
3103 3508 4.639755 TCGTACATTGCATCCAACATTGAT 59.360 37.500 0.00 0.00 32.95 2.57
3104 3509 4.006319 TCGTACATTGCATCCAACATTGA 58.994 39.130 0.00 0.00 32.95 2.57
3105 3510 4.142622 ACTCGTACATTGCATCCAACATTG 60.143 41.667 0.00 0.00 32.95 2.82
3106 3511 4.009675 ACTCGTACATTGCATCCAACATT 58.990 39.130 0.00 0.00 32.95 2.71
3107 3512 3.374988 CACTCGTACATTGCATCCAACAT 59.625 43.478 0.00 0.00 32.95 2.71
3108 3513 2.741517 CACTCGTACATTGCATCCAACA 59.258 45.455 0.00 0.00 32.95 3.33
3109 3514 2.476185 GCACTCGTACATTGCATCCAAC 60.476 50.000 5.66 0.00 36.22 3.77
3110 3515 1.737236 GCACTCGTACATTGCATCCAA 59.263 47.619 5.66 0.00 36.22 3.53
3111 3516 1.066215 AGCACTCGTACATTGCATCCA 60.066 47.619 11.66 0.00 38.81 3.41
3112 3517 1.656652 AGCACTCGTACATTGCATCC 58.343 50.000 11.66 0.00 38.81 3.51
3113 3518 3.448686 AGTAGCACTCGTACATTGCATC 58.551 45.455 11.66 5.39 38.81 3.91
3114 3519 3.526931 AGTAGCACTCGTACATTGCAT 57.473 42.857 11.66 2.05 38.81 3.96
3115 3520 4.649088 ATAGTAGCACTCGTACATTGCA 57.351 40.909 11.66 0.00 38.81 4.08
3116 3521 5.282510 AGAATAGTAGCACTCGTACATTGC 58.717 41.667 2.80 2.80 36.45 3.56
3117 3522 6.730175 AGAGAATAGTAGCACTCGTACATTG 58.270 40.000 0.00 0.00 34.98 2.82
3118 3523 6.945938 AGAGAATAGTAGCACTCGTACATT 57.054 37.500 0.00 0.00 34.98 2.71
3119 3524 6.651643 CCTAGAGAATAGTAGCACTCGTACAT 59.348 42.308 0.00 0.00 34.98 2.29
3120 3525 5.990386 CCTAGAGAATAGTAGCACTCGTACA 59.010 44.000 0.00 0.00 34.98 2.90
3121 3526 5.990996 ACCTAGAGAATAGTAGCACTCGTAC 59.009 44.000 0.00 0.00 34.98 3.67
3122 3527 6.172136 ACCTAGAGAATAGTAGCACTCGTA 57.828 41.667 0.00 0.00 34.98 3.43
3123 3528 5.038651 ACCTAGAGAATAGTAGCACTCGT 57.961 43.478 0.00 0.00 34.98 4.18
3124 3529 7.388224 TCATTACCTAGAGAATAGTAGCACTCG 59.612 40.741 0.00 0.00 34.98 4.18
3125 3530 8.624367 TCATTACCTAGAGAATAGTAGCACTC 57.376 38.462 0.00 0.00 0.00 3.51
3126 3531 8.998277 TTCATTACCTAGAGAATAGTAGCACT 57.002 34.615 0.00 0.00 0.00 4.40
3129 3534 9.478768 GGTTTTCATTACCTAGAGAATAGTAGC 57.521 37.037 0.00 0.00 32.75 3.58
3130 3535 9.984190 GGGTTTTCATTACCTAGAGAATAGTAG 57.016 37.037 0.00 0.00 35.92 2.57
3131 3536 9.496710 TGGGTTTTCATTACCTAGAGAATAGTA 57.503 33.333 0.00 0.00 35.92 1.82
3132 3537 8.388656 TGGGTTTTCATTACCTAGAGAATAGT 57.611 34.615 0.00 0.00 35.92 2.12
3133 3538 7.442666 GCTGGGTTTTCATTACCTAGAGAATAG 59.557 40.741 9.26 0.00 44.49 1.73
3134 3539 7.280356 GCTGGGTTTTCATTACCTAGAGAATA 58.720 38.462 9.26 0.00 44.49 1.75
3135 3540 6.122964 GCTGGGTTTTCATTACCTAGAGAAT 58.877 40.000 9.26 0.00 44.49 2.40
3136 3541 5.497474 GCTGGGTTTTCATTACCTAGAGAA 58.503 41.667 9.26 0.00 44.49 2.87
3137 3542 4.080526 GGCTGGGTTTTCATTACCTAGAGA 60.081 45.833 9.26 0.00 44.49 3.10
3138 3543 4.200092 GGCTGGGTTTTCATTACCTAGAG 58.800 47.826 9.26 0.00 44.49 2.43
3139 3544 3.589735 TGGCTGGGTTTTCATTACCTAGA 59.410 43.478 9.26 0.00 44.49 2.43
3140 3545 3.963129 TGGCTGGGTTTTCATTACCTAG 58.037 45.455 0.00 0.00 44.52 3.02
3141 3546 4.083565 GTTGGCTGGGTTTTCATTACCTA 58.916 43.478 0.00 0.00 35.92 3.08
3142 3547 2.897326 GTTGGCTGGGTTTTCATTACCT 59.103 45.455 0.00 0.00 35.92 3.08
3143 3548 2.352323 CGTTGGCTGGGTTTTCATTACC 60.352 50.000 0.00 0.00 34.82 2.85
3144 3549 2.554893 TCGTTGGCTGGGTTTTCATTAC 59.445 45.455 0.00 0.00 0.00 1.89
3145 3550 2.817258 CTCGTTGGCTGGGTTTTCATTA 59.183 45.455 0.00 0.00 0.00 1.90
3146 3551 1.613437 CTCGTTGGCTGGGTTTTCATT 59.387 47.619 0.00 0.00 0.00 2.57
3147 3552 1.202879 TCTCGTTGGCTGGGTTTTCAT 60.203 47.619 0.00 0.00 0.00 2.57
3148 3553 0.181587 TCTCGTTGGCTGGGTTTTCA 59.818 50.000 0.00 0.00 0.00 2.69
3149 3554 0.591659 GTCTCGTTGGCTGGGTTTTC 59.408 55.000 0.00 0.00 0.00 2.29
3150 3555 1.164041 CGTCTCGTTGGCTGGGTTTT 61.164 55.000 0.00 0.00 0.00 2.43
3151 3556 1.597027 CGTCTCGTTGGCTGGGTTT 60.597 57.895 0.00 0.00 0.00 3.27
3152 3557 2.030562 CGTCTCGTTGGCTGGGTT 59.969 61.111 0.00 0.00 0.00 4.11
3153 3558 4.681978 GCGTCTCGTTGGCTGGGT 62.682 66.667 0.00 0.00 0.00 4.51
3154 3559 4.379243 AGCGTCTCGTTGGCTGGG 62.379 66.667 0.00 0.00 35.31 4.45
3155 3560 2.811317 GAGCGTCTCGTTGGCTGG 60.811 66.667 0.00 0.00 37.10 4.85
3169 3574 3.749735 GAGAGAGAGCCGTGCGAGC 62.750 68.421 0.00 0.00 0.00 5.03
3170 3575 2.402572 TGAGAGAGAGCCGTGCGAG 61.403 63.158 0.00 0.00 0.00 5.03
3171 3576 2.359975 TGAGAGAGAGCCGTGCGA 60.360 61.111 0.00 0.00 0.00 5.10
3172 3577 2.202544 GTGAGAGAGAGCCGTGCG 60.203 66.667 0.00 0.00 0.00 5.34
3173 3578 1.138671 GAGTGAGAGAGAGCCGTGC 59.861 63.158 0.00 0.00 0.00 5.34
3174 3579 1.132262 GAAGAGTGAGAGAGAGCCGTG 59.868 57.143 0.00 0.00 0.00 4.94
3175 3580 1.459450 GAAGAGTGAGAGAGAGCCGT 58.541 55.000 0.00 0.00 0.00 5.68
3176 3581 0.376852 CGAAGAGTGAGAGAGAGCCG 59.623 60.000 0.00 0.00 0.00 5.52
3177 3582 1.400494 GACGAAGAGTGAGAGAGAGCC 59.600 57.143 0.00 0.00 0.00 4.70
3178 3583 2.356135 AGACGAAGAGTGAGAGAGAGC 58.644 52.381 0.00 0.00 0.00 4.09
3179 3584 3.374058 GGAAGACGAAGAGTGAGAGAGAG 59.626 52.174 0.00 0.00 0.00 3.20
3180 3585 3.008594 AGGAAGACGAAGAGTGAGAGAGA 59.991 47.826 0.00 0.00 0.00 3.10
3181 3586 3.343617 AGGAAGACGAAGAGTGAGAGAG 58.656 50.000 0.00 0.00 0.00 3.20
3182 3587 3.340034 GAGGAAGACGAAGAGTGAGAGA 58.660 50.000 0.00 0.00 0.00 3.10
3183 3588 2.422127 GGAGGAAGACGAAGAGTGAGAG 59.578 54.545 0.00 0.00 0.00 3.20
3184 3589 2.224793 TGGAGGAAGACGAAGAGTGAGA 60.225 50.000 0.00 0.00 0.00 3.27
3185 3590 2.163509 TGGAGGAAGACGAAGAGTGAG 58.836 52.381 0.00 0.00 0.00 3.51
3186 3591 2.287977 TGGAGGAAGACGAAGAGTGA 57.712 50.000 0.00 0.00 0.00 3.41
3187 3592 2.610727 GGTTGGAGGAAGACGAAGAGTG 60.611 54.545 0.00 0.00 0.00 3.51
3188 3593 1.619332 GGTTGGAGGAAGACGAAGAGT 59.381 52.381 0.00 0.00 0.00 3.24
3189 3594 1.618837 TGGTTGGAGGAAGACGAAGAG 59.381 52.381 0.00 0.00 0.00 2.85
3190 3595 1.343465 GTGGTTGGAGGAAGACGAAGA 59.657 52.381 0.00 0.00 0.00 2.87
3191 3596 1.344763 AGTGGTTGGAGGAAGACGAAG 59.655 52.381 0.00 0.00 0.00 3.79
3192 3597 1.070134 CAGTGGTTGGAGGAAGACGAA 59.930 52.381 0.00 0.00 0.00 3.85
3193 3598 0.679505 CAGTGGTTGGAGGAAGACGA 59.320 55.000 0.00 0.00 0.00 4.20
3194 3599 0.393077 ACAGTGGTTGGAGGAAGACG 59.607 55.000 0.00 0.00 0.00 4.18
3195 3600 1.416401 TGACAGTGGTTGGAGGAAGAC 59.584 52.381 0.00 0.00 0.00 3.01
3196 3601 1.416401 GTGACAGTGGTTGGAGGAAGA 59.584 52.381 0.00 0.00 0.00 2.87
3197 3602 1.140852 TGTGACAGTGGTTGGAGGAAG 59.859 52.381 0.00 0.00 0.00 3.46
3198 3603 1.140852 CTGTGACAGTGGTTGGAGGAA 59.859 52.381 4.01 0.00 0.00 3.36
3199 3604 0.758734 CTGTGACAGTGGTTGGAGGA 59.241 55.000 4.01 0.00 0.00 3.71
3200 3605 0.469917 ACTGTGACAGTGGTTGGAGG 59.530 55.000 18.72 0.00 43.63 4.30
3201 3606 2.213499 GAACTGTGACAGTGGTTGGAG 58.787 52.381 20.19 0.00 44.62 3.86
3202 3607 1.134220 GGAACTGTGACAGTGGTTGGA 60.134 52.381 20.19 0.00 44.62 3.53
3203 3608 1.134098 AGGAACTGTGACAGTGGTTGG 60.134 52.381 20.19 0.00 44.62 3.77
3204 3609 2.158900 AGAGGAACTGTGACAGTGGTTG 60.159 50.000 20.19 0.00 44.62 3.77
3205 3610 2.119495 AGAGGAACTGTGACAGTGGTT 58.881 47.619 20.19 3.15 44.62 3.67
3206 3611 1.794714 AGAGGAACTGTGACAGTGGT 58.205 50.000 20.19 4.00 44.62 4.16
3207 3612 2.918712 AAGAGGAACTGTGACAGTGG 57.081 50.000 20.19 0.00 44.62 4.00
3208 3613 4.054671 GAGAAAGAGGAACTGTGACAGTG 58.945 47.826 20.19 0.00 44.62 3.66
3210 3615 4.327982 TGAGAAAGAGGAACTGTGACAG 57.672 45.455 11.70 11.70 41.55 3.51
3211 3616 4.162320 ACTTGAGAAAGAGGAACTGTGACA 59.838 41.667 0.00 0.00 41.55 3.58
3212 3617 4.698575 ACTTGAGAAAGAGGAACTGTGAC 58.301 43.478 0.00 0.00 41.55 3.67
3213 3618 4.202264 GGACTTGAGAAAGAGGAACTGTGA 60.202 45.833 0.00 0.00 41.55 3.58
3214 3619 4.061596 GGACTTGAGAAAGAGGAACTGTG 58.938 47.826 0.00 0.00 41.55 3.66
3215 3620 3.970640 AGGACTTGAGAAAGAGGAACTGT 59.029 43.478 0.00 0.00 41.55 3.55
3216 3621 4.615588 AGGACTTGAGAAAGAGGAACTG 57.384 45.455 0.00 0.00 41.55 3.16
3218 3623 6.596106 GGATTTAGGACTTGAGAAAGAGGAAC 59.404 42.308 0.00 0.00 0.00 3.62
3219 3624 6.502158 AGGATTTAGGACTTGAGAAAGAGGAA 59.498 38.462 0.00 0.00 0.00 3.36
3220 3625 6.026186 AGGATTTAGGACTTGAGAAAGAGGA 58.974 40.000 0.00 0.00 0.00 3.71
3221 3626 6.306643 AGGATTTAGGACTTGAGAAAGAGG 57.693 41.667 0.00 0.00 0.00 3.69
3222 3627 6.039616 CGAGGATTTAGGACTTGAGAAAGAG 58.960 44.000 0.00 0.00 0.00 2.85
3223 3628 5.480772 ACGAGGATTTAGGACTTGAGAAAGA 59.519 40.000 0.00 0.00 0.00 2.52
3224 3629 5.725362 ACGAGGATTTAGGACTTGAGAAAG 58.275 41.667 0.00 0.00 0.00 2.62
3225 3630 5.740290 ACGAGGATTTAGGACTTGAGAAA 57.260 39.130 0.00 0.00 0.00 2.52
3226 3631 5.713389 TGTACGAGGATTTAGGACTTGAGAA 59.287 40.000 0.00 0.00 0.00 2.87
3227 3632 5.258841 TGTACGAGGATTTAGGACTTGAGA 58.741 41.667 0.00 0.00 0.00 3.27
3228 3633 5.578005 TGTACGAGGATTTAGGACTTGAG 57.422 43.478 0.00 0.00 0.00 3.02
3229 3634 5.892119 AGATGTACGAGGATTTAGGACTTGA 59.108 40.000 0.00 0.00 0.00 3.02
3230 3635 6.150396 AGATGTACGAGGATTTAGGACTTG 57.850 41.667 0.00 0.00 0.00 3.16
3231 3636 6.380274 TGAAGATGTACGAGGATTTAGGACTT 59.620 38.462 0.00 0.00 0.00 3.01
3232 3637 5.892119 TGAAGATGTACGAGGATTTAGGACT 59.108 40.000 0.00 0.00 0.00 3.85
3233 3638 5.978322 GTGAAGATGTACGAGGATTTAGGAC 59.022 44.000 0.00 0.00 0.00 3.85
3234 3639 5.892119 AGTGAAGATGTACGAGGATTTAGGA 59.108 40.000 0.00 0.00 0.00 2.94
3235 3640 6.150396 AGTGAAGATGTACGAGGATTTAGG 57.850 41.667 0.00 0.00 0.00 2.69
3236 3641 6.039941 AGGAGTGAAGATGTACGAGGATTTAG 59.960 42.308 0.00 0.00 0.00 1.85
3237 3642 5.892119 AGGAGTGAAGATGTACGAGGATTTA 59.108 40.000 0.00 0.00 0.00 1.40
3238 3643 4.712337 AGGAGTGAAGATGTACGAGGATTT 59.288 41.667 0.00 0.00 0.00 2.17
3239 3644 4.282496 AGGAGTGAAGATGTACGAGGATT 58.718 43.478 0.00 0.00 0.00 3.01
3240 3645 3.904717 AGGAGTGAAGATGTACGAGGAT 58.095 45.455 0.00 0.00 0.00 3.24
3241 3646 3.367646 AGGAGTGAAGATGTACGAGGA 57.632 47.619 0.00 0.00 0.00 3.71
3242 3647 3.775202 CAAGGAGTGAAGATGTACGAGG 58.225 50.000 0.00 0.00 0.00 4.63
3243 3648 3.119316 AGCAAGGAGTGAAGATGTACGAG 60.119 47.826 0.00 0.00 0.00 4.18
3244 3649 2.826128 AGCAAGGAGTGAAGATGTACGA 59.174 45.455 0.00 0.00 0.00 3.43
3245 3650 3.238108 AGCAAGGAGTGAAGATGTACG 57.762 47.619 0.00 0.00 0.00 3.67
3246 3651 6.109359 ACATTAGCAAGGAGTGAAGATGTAC 58.891 40.000 0.00 0.00 0.00 2.90
3247 3652 6.299805 ACATTAGCAAGGAGTGAAGATGTA 57.700 37.500 0.00 0.00 0.00 2.29
3248 3653 5.171339 ACATTAGCAAGGAGTGAAGATGT 57.829 39.130 0.00 0.00 0.00 3.06
3249 3654 5.065731 GGAACATTAGCAAGGAGTGAAGATG 59.934 44.000 0.00 0.00 0.00 2.90
3250 3655 5.189180 GGAACATTAGCAAGGAGTGAAGAT 58.811 41.667 0.00 0.00 0.00 2.40
3251 3656 4.041567 TGGAACATTAGCAAGGAGTGAAGA 59.958 41.667 0.00 0.00 0.00 2.87
3252 3657 4.154918 GTGGAACATTAGCAAGGAGTGAAG 59.845 45.833 0.00 0.00 44.52 3.02
3253 3658 4.072131 GTGGAACATTAGCAAGGAGTGAA 58.928 43.478 0.00 0.00 44.52 3.18
3254 3659 3.327757 AGTGGAACATTAGCAAGGAGTGA 59.672 43.478 0.00 0.00 44.52 3.41
3255 3660 3.679389 AGTGGAACATTAGCAAGGAGTG 58.321 45.455 0.00 0.00 44.52 3.51
3256 3661 3.307762 GGAGTGGAACATTAGCAAGGAGT 60.308 47.826 0.00 0.00 44.52 3.85
3257 3662 3.054802 AGGAGTGGAACATTAGCAAGGAG 60.055 47.826 0.00 0.00 44.52 3.69
3258 3663 2.912956 AGGAGTGGAACATTAGCAAGGA 59.087 45.455 0.00 0.00 44.52 3.36
3259 3664 3.356529 AGGAGTGGAACATTAGCAAGG 57.643 47.619 0.00 0.00 44.52 3.61
3260 3665 5.529060 GGATTAGGAGTGGAACATTAGCAAG 59.471 44.000 0.00 0.00 44.52 4.01
3261 3666 5.437060 GGATTAGGAGTGGAACATTAGCAA 58.563 41.667 0.00 0.00 44.52 3.91
3262 3667 4.141482 GGGATTAGGAGTGGAACATTAGCA 60.141 45.833 0.00 0.00 44.52 3.49
3263 3668 4.103311 AGGGATTAGGAGTGGAACATTAGC 59.897 45.833 0.00 0.00 44.52 3.09
3264 3669 5.896073 AGGGATTAGGAGTGGAACATTAG 57.104 43.478 0.00 0.00 44.52 1.73
3265 3670 9.629649 ATTATAGGGATTAGGAGTGGAACATTA 57.370 33.333 0.00 0.00 44.52 1.90
3266 3671 7.947782 TTATAGGGATTAGGAGTGGAACATT 57.052 36.000 0.00 0.00 44.52 2.71
3267 3672 8.525729 AATTATAGGGATTAGGAGTGGAACAT 57.474 34.615 0.00 0.00 44.52 2.71
3268 3673 7.947782 AATTATAGGGATTAGGAGTGGAACA 57.052 36.000 0.00 0.00 41.43 3.18
3269 3674 9.642343 AAAAATTATAGGGATTAGGAGTGGAAC 57.358 33.333 0.00 0.00 0.00 3.62
3270 3675 9.862149 GAAAAATTATAGGGATTAGGAGTGGAA 57.138 33.333 0.00 0.00 0.00 3.53
3271 3676 8.154856 CGAAAAATTATAGGGATTAGGAGTGGA 58.845 37.037 0.00 0.00 0.00 4.02
3272 3677 7.094762 GCGAAAAATTATAGGGATTAGGAGTGG 60.095 40.741 0.00 0.00 0.00 4.00
3273 3678 7.360101 CGCGAAAAATTATAGGGATTAGGAGTG 60.360 40.741 0.00 0.00 0.00 3.51
3274 3679 6.649557 CGCGAAAAATTATAGGGATTAGGAGT 59.350 38.462 0.00 0.00 0.00 3.85
3275 3680 6.872020 TCGCGAAAAATTATAGGGATTAGGAG 59.128 38.462 6.20 0.00 0.00 3.69
3276 3681 6.761312 TCGCGAAAAATTATAGGGATTAGGA 58.239 36.000 6.20 0.00 0.00 2.94
3277 3682 7.611213 ATCGCGAAAAATTATAGGGATTAGG 57.389 36.000 15.24 0.00 31.83 2.69
3278 3683 9.543018 GAAATCGCGAAAAATTATAGGGATTAG 57.457 33.333 15.24 0.00 41.45 1.73
3279 3684 8.508875 GGAAATCGCGAAAAATTATAGGGATTA 58.491 33.333 15.24 0.00 41.45 1.75
3280 3685 7.368059 GGAAATCGCGAAAAATTATAGGGATT 58.632 34.615 15.24 0.00 43.20 3.01
3281 3686 6.072119 GGGAAATCGCGAAAAATTATAGGGAT 60.072 38.462 15.24 0.00 36.31 3.85
3282 3687 5.239963 GGGAAATCGCGAAAAATTATAGGGA 59.760 40.000 15.24 0.00 0.00 4.20
3283 3688 5.458015 GGGAAATCGCGAAAAATTATAGGG 58.542 41.667 15.24 0.00 0.00 3.53
3284 3689 5.240844 AGGGGAAATCGCGAAAAATTATAGG 59.759 40.000 15.24 0.00 0.00 2.57
3285 3690 6.017440 TGAGGGGAAATCGCGAAAAATTATAG 60.017 38.462 15.24 0.00 0.00 1.31
3286 3691 5.823570 TGAGGGGAAATCGCGAAAAATTATA 59.176 36.000 15.24 0.00 0.00 0.98
3287 3692 4.642885 TGAGGGGAAATCGCGAAAAATTAT 59.357 37.500 15.24 0.00 0.00 1.28
3288 3693 4.011023 TGAGGGGAAATCGCGAAAAATTA 58.989 39.130 15.24 0.00 0.00 1.40
3289 3694 2.823154 TGAGGGGAAATCGCGAAAAATT 59.177 40.909 15.24 6.18 0.00 1.82
3290 3695 2.442413 TGAGGGGAAATCGCGAAAAAT 58.558 42.857 15.24 0.00 0.00 1.82
3291 3696 1.898902 TGAGGGGAAATCGCGAAAAA 58.101 45.000 15.24 0.00 0.00 1.94
3292 3697 3.635271 TGAGGGGAAATCGCGAAAA 57.365 47.368 15.24 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.