AutoCloner

Multiple sequence alignment - TraesCS7A01G011900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7A01G011900	chr7A	100.000	6296	0	0	1	6296	5185384	5179089	0.000000e+00	11627
1	TraesCS7A01G011900	chr7A	94.449	3351	111	26	556	3855	14730029	14733355	0.000000e+00	5088
2	TraesCS7A01G011900	chr7A	97.707	916	21	0	4802	5717	14734292	14735207	0.000000e+00	1576
3	TraesCS7A01G011900	chr7A	94.432	880	47	1	3916	4795	14733355	14734232	0.000000e+00	1352
4	TraesCS7A01G011900	chr7A	90.216	603	39	8	5713	6296	437074369	437074970	0.000000e+00	769
5	TraesCS7A01G011900	chr7A	89.506	324	31	3	249	570	5210125	5209803	2.110000e-109	407
6	TraesCS7A01G011900	chr7A	86.667	240	8	14	466	681	56162517	56162756	1.750000e-60	244
7	TraesCS7A01G011900	chr7D	94.876	4391	134	27	466	4795	15828908	15833268	0.000000e+00	6778
8	TraesCS7A01G011900	chr7D	95.294	935	22	3	4802	5715	15833328	15834261	0.000000e+00	1463
9	TraesCS7A01G011900	chr4A	91.965	3460	170	42	490	3856	719169318	719165874	0.000000e+00	4750
10	TraesCS7A01G011900	chr4A	94.653	879	45	2	3918	4795	719165873	719164996	0.000000e+00	1362
11	TraesCS7A01G011900	chr4A	92.557	833	43	5	4802	5615	719164936	719164104	0.000000e+00	1177
12	TraesCS7A01G011900	chr3D	89.984	609	36	7	5708	6296	581095630	581096233	0.000000e+00	763
13	TraesCS7A01G011900	chr1D	89.735	604	41	5	5712	6296	446755990	446756591	0.000000e+00	752
14	TraesCS7A01G011900	chr2A	89.414	614	38	12	5702	6291	98897400	98898010	0.000000e+00	749
15	TraesCS7A01G011900	chr2B	89.552	603	43	4	5713	6296	94937267	94937868	0.000000e+00	747
16	TraesCS7A01G011900	chr2B	88.662	538	40	5	5711	6229	704582301	704581766	2.480000e-178	636
17	TraesCS7A01G011900	chrUn	90.085	585	39	3	5730	6296	62534211	62534794	0.000000e+00	741
18	TraesCS7A01G011900	chrUn	89.761	586	40	4	5730	6296	62462199	62462783	0.000000e+00	732
19	TraesCS7A01G011900	chrUn	89.167	600	44	5	5716	6296	8098797	8098200	0.000000e+00	728
20	TraesCS7A01G011900	chrUn	89.555	584	41	4	5730	6294	62406498	62407080	0.000000e+00	723
21	TraesCS7A01G011900	chrUn	89.078	586	44	4	5730	6296	62345158	62345742	0.000000e+00	710
22	TraesCS7A01G011900	chrUn	89.078	586	44	4	5730	6296	247224968	247225552	0.000000e+00	710
23	TraesCS7A01G011900	chr6A	89.420	586	42	4	5730	6296	4286552	4285968	0.000000e+00	721
24	TraesCS7A01G011900	chr6A	89.078	586	44	4	5730	6296	4357151	4356567	0.000000e+00	710
25	TraesCS7A01G011900	chr6A	79.337	513	96	9	3233	3741	2955881	2956387	1.000000e-92	351
26	TraesCS7A01G011900	chr6A	83.571	140	23	0	4052	4191	2956727	2956866	1.420000e-26	132
27	TraesCS7A01G011900	chr6B	88.852	601	43	8	5716	6296	34338223	34337627	0.000000e+00	717
28	TraesCS7A01G011900	chr6B	90.347	259	15	6	531	780	640316080	640315823	1.310000e-86	331
29	TraesCS7A01G011900	chr6B	84.512	297	43	3	3447	3741	7939596	7939301	2.220000e-74	291
30	TraesCS7A01G011900	chr6B	84.559	136	21	0	4056	4191	7938894	7938759	1.100000e-27	135
31	TraesCS7A01G011900	chr5D	89.236	576	41	11	5715	6271	535902201	535901628	0.000000e+00	701
32	TraesCS7A01G011900	chr2D	89.085	568	39	9	5715	6262	591268964	591268400	0.000000e+00	684
33	TraesCS7A01G011900	chr4D	92.063	441	29	5	5714	6152	498379437	498379001	3.230000e-172	616
34	TraesCS7A01G011900	chr6D	80.117	513	92	9	3233	3741	4633411	4633917	2.140000e-99	374
35	TraesCS7A01G011900	chr6D	80.000	160	29	3	4034	4191	4634256	4634414	1.430000e-21	115

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7A01G011900	chr7A	5179089	5185384	6295	True	11627.000000	11627	100.000000	1	6296	1	chr7A.!!$R1	6295
1	TraesCS7A01G011900	chr7A	14730029	14735207	5178	False	2672.000000	5088	95.529333	556	5717	3	chr7A.!!$F3	5161
2	TraesCS7A01G011900	chr7A	437074369	437074970	601	False	769.000000	769	90.216000	5713	6296	1	chr7A.!!$F2	583
3	TraesCS7A01G011900	chr7D	15828908	15834261	5353	False	4120.500000	6778	95.085000	466	5715	2	chr7D.!!$F1	5249
4	TraesCS7A01G011900	chr4A	719164104	719169318	5214	True	2429.666667	4750	93.058333	490	5615	3	chr4A.!!$R1	5125
5	TraesCS7A01G011900	chr3D	581095630	581096233	603	False	763.000000	763	89.984000	5708	6296	1	chr3D.!!$F1	588
6	TraesCS7A01G011900	chr1D	446755990	446756591	601	False	752.000000	752	89.735000	5712	6296	1	chr1D.!!$F1	584
7	TraesCS7A01G011900	chr2A	98897400	98898010	610	False	749.000000	749	89.414000	5702	6291	1	chr2A.!!$F1	589
8	TraesCS7A01G011900	chr2B	94937267	94937868	601	False	747.000000	747	89.552000	5713	6296	1	chr2B.!!$F1	583
9	TraesCS7A01G011900	chr2B	704581766	704582301	535	True	636.000000	636	88.662000	5711	6229	1	chr2B.!!$R1	518
10	TraesCS7A01G011900	chrUn	62534211	62534794	583	False	741.000000	741	90.085000	5730	6296	1	chrUn.!!$F4	566
11	TraesCS7A01G011900	chrUn	62462199	62462783	584	False	732.000000	732	89.761000	5730	6296	1	chrUn.!!$F3	566
12	TraesCS7A01G011900	chrUn	8098200	8098797	597	True	728.000000	728	89.167000	5716	6296	1	chrUn.!!$R1	580
13	TraesCS7A01G011900	chrUn	62406498	62407080	582	False	723.000000	723	89.555000	5730	6294	1	chrUn.!!$F2	564
14	TraesCS7A01G011900	chrUn	62345158	62345742	584	False	710.000000	710	89.078000	5730	6296	1	chrUn.!!$F1	566
15	TraesCS7A01G011900	chrUn	247224968	247225552	584	False	710.000000	710	89.078000	5730	6296	1	chrUn.!!$F5	566
16	TraesCS7A01G011900	chr6A	4285968	4286552	584	True	721.000000	721	89.420000	5730	6296	1	chr6A.!!$R1	566
17	TraesCS7A01G011900	chr6A	4356567	4357151	584	True	710.000000	710	89.078000	5730	6296	1	chr6A.!!$R2	566
18	TraesCS7A01G011900	chr6A	2955881	2956866	985	False	241.500000	351	81.454000	3233	4191	2	chr6A.!!$F1	958
19	TraesCS7A01G011900	chr6B	34337627	34338223	596	True	717.000000	717	88.852000	5716	6296	1	chr6B.!!$R1	580
20	TraesCS7A01G011900	chr6B	7938759	7939596	837	True	213.000000	291	84.535500	3447	4191	2	chr6B.!!$R3	744
21	TraesCS7A01G011900	chr5D	535901628	535902201	573	True	701.000000	701	89.236000	5715	6271	1	chr5D.!!$R1	556
22	TraesCS7A01G011900	chr2D	591268400	591268964	564	True	684.000000	684	89.085000	5715	6262	1	chr2D.!!$R1	547
23	TraesCS7A01G011900	chr6D	4633411	4634414	1003	False	244.500000	374	80.058500	3233	4191	2	chr6D.!!$F1	958

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
251	252	0.034337	GCCCGCTCCCATATTCGTAA	59.966	55.000	0.00	0.00	3.18	F
635	649	0.605589	CAAGTCTGAACCCGCTCTCT	59.394	55.000	0.00	0.00	3.10	F
661	681	1.682344	GCCCACCATTTCCACTCCC	60.682	63.158	0.00	0.00	4.30	F
662	682	1.773635	CCCACCATTTCCACTCCCA	59.226	57.895	0.00	0.00	4.37	F
939	983	1.866925	CTTTTTCCGACTCCACCGC	59.133	57.895	0.00	0.00	5.68	F
1838	1906	1.892819	CGAAGCTGGGGAAGAGCTCA	61.893	60.000	17.77	46.32	4.26	F
2711	2796	2.283145	ATTCAGCAAGAACAGTGCCT	57.717	45.000	0.00	43.27	4.75	F
4448	4826	1.523154	TAGGTTGCCTGCCTTTTGCG	61.523	55.000	0.00	45.60	4.85	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1673	1741	2.623418	TGCTCTCCCACTTCCTCTTA	57.377	50.000	0.00	0.00	0.00	2.10	R
2604	2689	0.814457	AAACGTGTCAAAGGCTGCAA	59.186	45.000	0.50	0.00	0.00	4.08	R
2711	2796	9.042450	TGTATCCTTTTCTGGTCTAAGTATTCA	57.958	33.333	0.00	0.00	0.00	2.57	R
2797	2904	8.438676	ACATCTAACAGAACCTAATGCATTAC	57.561	34.615	15.21	5.92	0.00	1.89	R
3024	3132	9.375974	AGACTAATGTATAAATACCCACTAGCA	57.624	33.333	0.00	0.00	32.33	3.49	R
3926	4302	1.358152	AGGAAGGACGATGGGTGAAA	58.642	50.000	0.00	0.00	0.00	2.69	R
4608	4986	1.000607	GCTACCGAGAATATCACCGCA	60.001	52.381	0.00	0.00	0.00	5.69	R
5794	6265	1.040646	TGGTCTACGGATCTGGATGC	58.959	55.000	6.47	0.00	0.00	3.91	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	4.750460	AGCGAGACGAAAGCACAA	57.250	50.000	0.00	0.00	0.00	3.33
18	19	2.986311	AGCGAGACGAAAGCACAAA	58.014	47.368	0.00	0.00	0.00	2.83
19	20	1.295792	AGCGAGACGAAAGCACAAAA	58.704	45.000	0.00	0.00	0.00	2.44
20	21	1.003866	AGCGAGACGAAAGCACAAAAC	60.004	47.619	0.00	0.00	0.00	2.43
21	22	1.647748	CGAGACGAAAGCACAAAACG	58.352	50.000	0.00	0.00	0.00	3.60
22	23	1.256895	CGAGACGAAAGCACAAAACGA	59.743	47.619	0.00	0.00	0.00	3.85
23	24	2.625828	GAGACGAAAGCACAAAACGAC	58.374	47.619	0.00	0.00	0.00	4.34
24	25	1.005347	AGACGAAAGCACAAAACGACG	60.005	47.619	0.00	0.00	0.00	5.12
25	26	1.000884	ACGAAAGCACAAAACGACGA	58.999	45.000	0.00	0.00	0.00	4.20
26	27	1.595794	ACGAAAGCACAAAACGACGAT	59.404	42.857	0.00	0.00	0.00	3.73
27	28	2.031191	ACGAAAGCACAAAACGACGATT	59.969	40.909	0.00	0.00	0.00	3.34
28	29	3.033185	CGAAAGCACAAAACGACGATTT	58.967	40.909	0.00	0.00	0.00	2.17
29	30	3.480668	CGAAAGCACAAAACGACGATTTT	59.519	39.130	0.00	2.10	31.87	1.82
30	31	4.028026	CGAAAGCACAAAACGACGATTTTT	60.028	37.500	0.00	0.00	29.17	1.94
31	32	4.753516	AAGCACAAAACGACGATTTTTG	57.246	36.364	17.31	17.31	45.52	2.44
38	39	5.838127	CAAAACGACGATTTTTGTTGTTGT	58.162	33.333	0.00	0.00	41.84	3.32
39	40	6.292873	CAAAACGACGATTTTTGTTGTTGTT	58.707	32.000	0.00	0.00	41.84	2.83
40	41	6.455045	AAACGACGATTTTTGTTGTTGTTT	57.545	29.167	0.00	6.76	41.84	2.83
41	42	5.428793	ACGACGATTTTTGTTGTTGTTTG	57.571	34.783	0.00	0.00	29.59	2.93
42	43	4.324936	ACGACGATTTTTGTTGTTGTTTGG	59.675	37.500	0.00	0.00	29.59	3.28
43	44	4.559251	CGACGATTTTTGTTGTTGTTTGGA	59.441	37.500	0.00	0.00	0.00	3.53
44	45	5.061064	CGACGATTTTTGTTGTTGTTTGGAA	59.939	36.000	0.00	0.00	0.00	3.53
45	46	6.400091	CGACGATTTTTGTTGTTGTTTGGAAA	60.400	34.615	0.00	0.00	0.00	3.13
46	47	6.594886	ACGATTTTTGTTGTTGTTTGGAAAC	58.405	32.000	0.00	0.00	39.33	2.78
47	48	6.425417	ACGATTTTTGTTGTTGTTTGGAAACT	59.575	30.769	4.02	0.00	39.59	2.66
48	49	7.599245	ACGATTTTTGTTGTTGTTTGGAAACTA	59.401	29.630	4.02	0.00	39.59	2.24
49	50	7.895767	CGATTTTTGTTGTTGTTTGGAAACTAC	59.104	33.333	9.13	9.13	42.36	2.73
50	51	8.840833	ATTTTTGTTGTTGTTTGGAAACTACT	57.159	26.923	14.87	0.00	42.45	2.57
51	52	8.664211	TTTTTGTTGTTGTTTGGAAACTACTT	57.336	26.923	14.87	0.00	42.45	2.24
52	53	8.664211	TTTTGTTGTTGTTTGGAAACTACTTT	57.336	26.923	14.87	0.00	42.45	2.66
53	54	8.664211	TTTGTTGTTGTTTGGAAACTACTTTT	57.336	26.923	14.87	0.00	42.45	2.27
54	55	9.760077	TTTGTTGTTGTTTGGAAACTACTTTTA	57.240	25.926	14.87	0.00	42.45	1.52
55	56	9.930693	TTGTTGTTGTTTGGAAACTACTTTTAT	57.069	25.926	14.87	0.00	42.45	1.40
56	57	9.360093	TGTTGTTGTTTGGAAACTACTTTTATG	57.640	29.630	14.87	0.00	42.45	1.90
57	58	9.575783	GTTGTTGTTTGGAAACTACTTTTATGA	57.424	29.630	14.87	0.00	42.45	2.15
58	59	9.796120	TTGTTGTTTGGAAACTACTTTTATGAG	57.204	29.630	14.87	0.00	42.45	2.90
59	60	9.179909	TGTTGTTTGGAAACTACTTTTATGAGA	57.820	29.630	14.87	0.00	42.45	3.27
60	61	9.665264	GTTGTTTGGAAACTACTTTTATGAGAG	57.335	33.333	8.88	0.00	40.08	3.20
61	62	8.974060	TGTTTGGAAACTACTTTTATGAGAGT	57.026	30.769	4.02	0.00	39.59	3.24
62	63	8.836413	TGTTTGGAAACTACTTTTATGAGAGTG	58.164	33.333	4.02	0.00	39.59	3.51
63	64	7.979444	TTGGAAACTACTTTTATGAGAGTGG	57.021	36.000	0.00	0.00	0.00	4.00
64	65	7.074653	TGGAAACTACTTTTATGAGAGTGGT	57.925	36.000	0.00	0.00	38.95	4.16
65	66	8.197592	TGGAAACTACTTTTATGAGAGTGGTA	57.802	34.615	0.00	0.00	36.71	3.25
66	67	8.822805	TGGAAACTACTTTTATGAGAGTGGTAT	58.177	33.333	0.00	0.00	36.71	2.73
74	75	9.331282	ACTTTTATGAGAGTGGTATAATTGCTC	57.669	33.333	0.00	0.00	0.00	4.26
75	76	9.553064	CTTTTATGAGAGTGGTATAATTGCTCT	57.447	33.333	0.00	0.00	39.00	4.09
86	87	9.084164	GTGGTATAATTGCTCTATATTACACCG	57.916	37.037	0.00	0.00	36.85	4.94
87	88	7.762615	TGGTATAATTGCTCTATATTACACCGC	59.237	37.037	0.00	0.00	36.85	5.68
88	89	7.224167	GGTATAATTGCTCTATATTACACCGCC	59.776	40.741	0.00	0.00	27.70	6.13
89	90	4.617253	ATTGCTCTATATTACACCGCCA	57.383	40.909	0.00	0.00	0.00	5.69
90	91	4.409718	TTGCTCTATATTACACCGCCAA	57.590	40.909	0.00	0.00	0.00	4.52
91	92	3.724374	TGCTCTATATTACACCGCCAAC	58.276	45.455	0.00	0.00	0.00	3.77
92	93	3.064931	GCTCTATATTACACCGCCAACC	58.935	50.000	0.00	0.00	0.00	3.77
93	94	3.660865	CTCTATATTACACCGCCAACCC	58.339	50.000	0.00	0.00	0.00	4.11
94	95	2.369532	TCTATATTACACCGCCAACCCC	59.630	50.000	0.00	0.00	0.00	4.95
95	96	0.179040	ATATTACACCGCCAACCCCG	60.179	55.000	0.00	0.00	0.00	5.73
96	97	2.872931	TATTACACCGCCAACCCCGC	62.873	60.000	0.00	0.00	0.00	6.13
104	105	4.114997	CCAACCCCGCACGCAATC	62.115	66.667	0.00	0.00	0.00	2.67
105	106	4.114997	CAACCCCGCACGCAATCC	62.115	66.667	0.00	0.00	0.00	3.01
106	107	4.344865	AACCCCGCACGCAATCCT	62.345	61.111	0.00	0.00	0.00	3.24
107	108	4.778143	ACCCCGCACGCAATCCTC	62.778	66.667	0.00	0.00	0.00	3.71
111	112	3.554692	CGCACGCAATCCTCCGTC	61.555	66.667	0.00	0.00	35.17	4.79
112	113	2.434185	GCACGCAATCCTCCGTCA	60.434	61.111	0.00	0.00	35.17	4.35
113	114	1.815421	GCACGCAATCCTCCGTCAT	60.815	57.895	0.00	0.00	35.17	3.06
114	115	1.369091	GCACGCAATCCTCCGTCATT	61.369	55.000	0.00	0.00	35.17	2.57
115	116	1.086696	CACGCAATCCTCCGTCATTT	58.913	50.000	0.00	0.00	35.17	2.32
116	117	1.086696	ACGCAATCCTCCGTCATTTG	58.913	50.000	0.00	0.00	31.00	2.32
117	118	1.338674	ACGCAATCCTCCGTCATTTGA	60.339	47.619	0.00	0.00	31.00	2.69
118	119	1.737236	CGCAATCCTCCGTCATTTGAA	59.263	47.619	0.00	0.00	0.00	2.69
119	120	2.223112	CGCAATCCTCCGTCATTTGAAG	60.223	50.000	0.00	0.00	0.00	3.02
120	121	2.749621	GCAATCCTCCGTCATTTGAAGT	59.250	45.455	0.00	0.00	0.00	3.01
121	122	3.191371	GCAATCCTCCGTCATTTGAAGTT	59.809	43.478	0.00	0.00	0.00	2.66
122	123	4.394920	GCAATCCTCCGTCATTTGAAGTTA	59.605	41.667	0.00	0.00	0.00	2.24
123	124	5.106317	GCAATCCTCCGTCATTTGAAGTTAA	60.106	40.000	0.00	0.00	0.00	2.01
124	125	6.314784	CAATCCTCCGTCATTTGAAGTTAAC	58.685	40.000	0.00	0.00	0.00	2.01
125	126	4.320870	TCCTCCGTCATTTGAAGTTAACC	58.679	43.478	0.88	0.00	0.00	2.85
126	127	3.439129	CCTCCGTCATTTGAAGTTAACCC	59.561	47.826	0.88	0.00	0.00	4.11
127	128	4.324267	CTCCGTCATTTGAAGTTAACCCT	58.676	43.478	0.88	0.00	0.00	4.34
128	129	4.320870	TCCGTCATTTGAAGTTAACCCTC	58.679	43.478	0.88	0.05	0.00	4.30
129	130	4.069304	CCGTCATTTGAAGTTAACCCTCA	58.931	43.478	0.88	2.92	0.00	3.86
130	131	4.517453	CCGTCATTTGAAGTTAACCCTCAA	59.483	41.667	13.91	13.91	0.00	3.02
131	132	5.183140	CCGTCATTTGAAGTTAACCCTCAAT	59.817	40.000	17.08	8.39	0.00	2.57
132	133	6.373216	CCGTCATTTGAAGTTAACCCTCAATA	59.627	38.462	17.08	10.94	0.00	1.90
133	134	7.414098	CCGTCATTTGAAGTTAACCCTCAATAG	60.414	40.741	17.08	13.56	0.00	1.73
134	135	7.333423	CGTCATTTGAAGTTAACCCTCAATAGA	59.667	37.037	17.08	14.99	0.00	1.98
135	136	9.178758	GTCATTTGAAGTTAACCCTCAATAGAT	57.821	33.333	17.08	8.72	0.00	1.98
136	137	9.177608	TCATTTGAAGTTAACCCTCAATAGATG	57.822	33.333	17.08	16.67	0.00	2.90
137	138	7.938140	TTTGAAGTTAACCCTCAATAGATGG	57.062	36.000	17.08	0.00	35.83	3.51
138	139	6.884472	TGAAGTTAACCCTCAATAGATGGA	57.116	37.500	0.88	0.00	34.07	3.41
139	140	6.889198	TGAAGTTAACCCTCAATAGATGGAG	58.111	40.000	0.88	0.00	34.07	3.86
140	141	6.443849	TGAAGTTAACCCTCAATAGATGGAGT	59.556	38.462	0.88	0.00	34.07	3.85
141	142	6.240549	AGTTAACCCTCAATAGATGGAGTG	57.759	41.667	0.88	0.00	34.07	3.51
142	143	5.964477	AGTTAACCCTCAATAGATGGAGTGA	59.036	40.000	0.88	0.00	34.07	3.41
143	144	6.443849	AGTTAACCCTCAATAGATGGAGTGAA	59.556	38.462	0.88	0.00	34.07	3.18
144	145	5.365021	AACCCTCAATAGATGGAGTGAAG	57.635	43.478	0.00	0.00	34.07	3.02
145	146	3.713764	ACCCTCAATAGATGGAGTGAAGG	59.286	47.826	0.00	0.00	32.44	3.46
146	147	3.072184	CCCTCAATAGATGGAGTGAAGGG	59.928	52.174	0.00	0.00	31.77	3.95
147	148	3.969976	CCTCAATAGATGGAGTGAAGGGA	59.030	47.826	0.00	0.00	0.00	4.20
148	149	4.040217	CCTCAATAGATGGAGTGAAGGGAG	59.960	50.000	0.00	0.00	0.00	4.30
149	150	3.969976	TCAATAGATGGAGTGAAGGGAGG	59.030	47.826	0.00	0.00	0.00	4.30
150	151	2.478872	TAGATGGAGTGAAGGGAGGG	57.521	55.000	0.00	0.00	0.00	4.30
151	152	0.985490	AGATGGAGTGAAGGGAGGGC	60.985	60.000	0.00	0.00	0.00	5.19
152	153	2.317149	GATGGAGTGAAGGGAGGGCG	62.317	65.000	0.00	0.00	0.00	6.13
153	154	2.683933	GGAGTGAAGGGAGGGCGA	60.684	66.667	0.00	0.00	0.00	5.54
154	155	2.066999	GGAGTGAAGGGAGGGCGAT	61.067	63.158	0.00	0.00	0.00	4.58
155	156	0.759436	GGAGTGAAGGGAGGGCGATA	60.759	60.000	0.00	0.00	0.00	2.92
156	157	0.676736	GAGTGAAGGGAGGGCGATAG	59.323	60.000	0.00	0.00	0.00	2.08
157	158	0.261991	AGTGAAGGGAGGGCGATAGA	59.738	55.000	0.00	0.00	39.76	1.98
158	159	0.676736	GTGAAGGGAGGGCGATAGAG	59.323	60.000	0.00	0.00	39.76	2.43
159	160	0.470080	TGAAGGGAGGGCGATAGAGG	60.470	60.000	0.00	0.00	39.76	3.69
160	161	1.152226	AAGGGAGGGCGATAGAGGG	60.152	63.158	0.00	0.00	39.76	4.30
161	162	1.665948	AAGGGAGGGCGATAGAGGGA	61.666	60.000	0.00	0.00	39.76	4.20
162	163	1.152312	GGGAGGGCGATAGAGGGAA	60.152	63.158	0.00	0.00	39.76	3.97
163	164	0.763223	GGGAGGGCGATAGAGGGAAA	60.763	60.000	0.00	0.00	39.76	3.13
164	165	1.129058	GGAGGGCGATAGAGGGAAAA	58.871	55.000	0.00	0.00	39.76	2.29
165	166	1.202663	GGAGGGCGATAGAGGGAAAAC	60.203	57.143	0.00	0.00	39.76	2.43
166	167	1.763545	GAGGGCGATAGAGGGAAAACT	59.236	52.381	0.00	0.00	39.76	2.66
167	168	2.963782	GAGGGCGATAGAGGGAAAACTA	59.036	50.000	0.00	0.00	39.76	2.24
168	169	3.381335	AGGGCGATAGAGGGAAAACTAA	58.619	45.455	0.00	0.00	39.76	2.24
169	170	3.778629	AGGGCGATAGAGGGAAAACTAAA	59.221	43.478	0.00	0.00	39.76	1.85
170	171	4.412528	AGGGCGATAGAGGGAAAACTAAAT	59.587	41.667	0.00	0.00	39.76	1.40
171	172	4.515567	GGGCGATAGAGGGAAAACTAAATG	59.484	45.833	0.00	0.00	39.76	2.32
172	173	5.123936	GGCGATAGAGGGAAAACTAAATGT	58.876	41.667	0.00	0.00	39.76	2.71
173	174	5.007724	GGCGATAGAGGGAAAACTAAATGTG	59.992	44.000	0.00	0.00	39.76	3.21
174	175	5.585047	GCGATAGAGGGAAAACTAAATGTGT	59.415	40.000	0.00	0.00	39.76	3.72
175	176	6.093633	GCGATAGAGGGAAAACTAAATGTGTT	59.906	38.462	0.00	0.00	39.76	3.32
176	177	7.361799	GCGATAGAGGGAAAACTAAATGTGTTT	60.362	37.037	0.00	0.00	37.49	2.83
177	178	8.175716	CGATAGAGGGAAAACTAAATGTGTTTC	58.824	37.037	0.00	0.00	35.79	2.78
178	179	9.232473	GATAGAGGGAAAACTAAATGTGTTTCT	57.768	33.333	0.00	0.00	36.72	2.52
179	180	7.511959	AGAGGGAAAACTAAATGTGTTTCTC	57.488	36.000	0.00	0.00	36.72	2.87
180	181	6.490381	AGAGGGAAAACTAAATGTGTTTCTCC	59.510	38.462	0.00	0.00	36.72	3.71
181	182	5.538813	AGGGAAAACTAAATGTGTTTCTCCC	59.461	40.000	19.64	19.64	44.14	4.30
182	183	5.279306	GGGAAAACTAAATGTGTTTCTCCCC	60.279	44.000	18.12	13.38	41.79	4.81
183	184	5.303333	GGAAAACTAAATGTGTTTCTCCCCA	59.697	40.000	0.00	0.00	36.72	4.96
184	185	5.784578	AAACTAAATGTGTTTCTCCCCAC	57.215	39.130	0.00	0.00	32.91	4.61
185	186	3.408634	ACTAAATGTGTTTCTCCCCACG	58.591	45.455	0.00	0.00	34.28	4.94
186	187	1.616159	AAATGTGTTTCTCCCCACGG	58.384	50.000	0.00	0.00	34.28	4.94
187	188	0.893727	AATGTGTTTCTCCCCACGGC	60.894	55.000	0.00	0.00	34.28	5.68
188	189	2.671963	GTGTTTCTCCCCACGGCC	60.672	66.667	0.00	0.00	0.00	6.13
189	190	2.852075	TGTTTCTCCCCACGGCCT	60.852	61.111	0.00	0.00	0.00	5.19
190	191	1.536907	TGTTTCTCCCCACGGCCTA	60.537	57.895	0.00	0.00	0.00	3.93
191	192	1.221021	GTTTCTCCCCACGGCCTAG	59.779	63.158	0.00	0.00	0.00	3.02
192	193	1.229400	TTTCTCCCCACGGCCTAGT	60.229	57.895	0.00	0.00	0.00	2.57
193	194	0.041535	TTTCTCCCCACGGCCTAGTA	59.958	55.000	0.00	0.00	0.00	1.82
194	195	0.396695	TTCTCCCCACGGCCTAGTAG	60.397	60.000	0.00	0.00	0.00	2.57
195	196	1.229359	CTCCCCACGGCCTAGTAGA	59.771	63.158	0.00	0.00	0.00	2.59
196	197	0.396695	CTCCCCACGGCCTAGTAGAA	60.397	60.000	0.00	0.00	0.00	2.10
197	198	0.041535	TCCCCACGGCCTAGTAGAAA	59.958	55.000	0.00	0.00	0.00	2.52
198	199	0.177373	CCCCACGGCCTAGTAGAAAC	59.823	60.000	0.00	0.00	0.00	2.78
199	200	0.179119	CCCACGGCCTAGTAGAAACG	60.179	60.000	0.00	2.87	0.00	3.60
200	201	0.179119	CCACGGCCTAGTAGAAACGG	60.179	60.000	0.00	0.00	0.00	4.44
201	202	0.813184	CACGGCCTAGTAGAAACGGA	59.187	55.000	0.00	0.00	0.00	4.69
202	203	1.407979	CACGGCCTAGTAGAAACGGAT	59.592	52.381	0.00	0.00	0.00	4.18
203	204	1.407979	ACGGCCTAGTAGAAACGGATG	59.592	52.381	0.00	0.00	0.00	3.51
204	205	1.679680	CGGCCTAGTAGAAACGGATGA	59.320	52.381	0.00	0.00	0.00	2.92
205	206	2.287668	CGGCCTAGTAGAAACGGATGAG	60.288	54.545	0.00	0.00	0.00	2.90
206	207	2.546162	GGCCTAGTAGAAACGGATGAGC	60.546	54.545	0.00	0.00	0.00	4.26
207	208	2.362717	GCCTAGTAGAAACGGATGAGCT	59.637	50.000	0.00	0.00	0.00	4.09
208	209	3.181474	GCCTAGTAGAAACGGATGAGCTT	60.181	47.826	0.00	0.00	0.00	3.74
209	210	4.612943	CCTAGTAGAAACGGATGAGCTTC	58.387	47.826	0.00	0.00	0.00	3.86
210	211	3.528597	AGTAGAAACGGATGAGCTTCC	57.471	47.619	0.00	0.00	0.00	3.46
211	212	3.100671	AGTAGAAACGGATGAGCTTCCT	58.899	45.455	2.99	0.00	33.30	3.36
212	213	3.515901	AGTAGAAACGGATGAGCTTCCTT	59.484	43.478	2.99	0.00	33.30	3.36
213	214	2.979240	AGAAACGGATGAGCTTCCTTC	58.021	47.619	2.99	1.46	33.30	3.46
214	215	1.661112	GAAACGGATGAGCTTCCTTCG	59.339	52.381	2.99	0.00	33.30	3.79
215	216	0.741221	AACGGATGAGCTTCCTTCGC	60.741	55.000	2.99	0.00	33.30	4.70
216	217	1.884926	CGGATGAGCTTCCTTCGCC	60.885	63.158	2.99	0.00	33.30	5.54
217	218	1.524849	GGATGAGCTTCCTTCGCCC	60.525	63.158	0.00	0.00	32.68	6.13
218	219	1.221840	GATGAGCTTCCTTCGCCCA	59.778	57.895	0.00	0.00	0.00	5.36
219	220	1.078143	ATGAGCTTCCTTCGCCCAC	60.078	57.895	0.00	0.00	0.00	4.61
220	221	2.815647	GAGCTTCCTTCGCCCACG	60.816	66.667	0.00	0.00	42.01	4.94
221	222	4.394712	AGCTTCCTTCGCCCACGG	62.395	66.667	0.00	0.00	40.63	4.94
232	233	3.754068	CCCACGGGCATGATCATG	58.246	61.111	28.04	28.04	41.60	3.07
240	241	3.664495	CATGATCATGCCCGCTCC	58.336	61.111	22.20	0.00	31.39	4.70
241	242	1.970114	CATGATCATGCCCGCTCCC	60.970	63.158	22.20	0.00	31.39	4.30
242	243	2.454688	ATGATCATGCCCGCTCCCA	61.455	57.895	7.59	0.00	0.00	4.37
243	244	1.786407	ATGATCATGCCCGCTCCCAT	61.786	55.000	7.59	0.00	0.00	4.00
244	245	1.126948	TGATCATGCCCGCTCCCATA	61.127	55.000	0.00	0.00	0.00	2.74
245	246	0.254178	GATCATGCCCGCTCCCATAT	59.746	55.000	0.00	0.00	0.00	1.78
246	247	0.700564	ATCATGCCCGCTCCCATATT	59.299	50.000	0.00	0.00	0.00	1.28
247	248	0.036732	TCATGCCCGCTCCCATATTC	59.963	55.000	0.00	0.00	0.00	1.75
248	249	1.003355	ATGCCCGCTCCCATATTCG	60.003	57.895	0.00	0.00	0.00	3.34
249	250	1.768684	ATGCCCGCTCCCATATTCGT	61.769	55.000	0.00	0.00	0.00	3.85
250	251	1.116536	TGCCCGCTCCCATATTCGTA	61.117	55.000	0.00	0.00	0.00	3.43
251	252	0.034337	GCCCGCTCCCATATTCGTAA	59.966	55.000	0.00	0.00	0.00	3.18
252	253	1.939838	GCCCGCTCCCATATTCGTAAG	60.940	57.143	0.00	0.00	0.00	2.34
253	254	1.337823	CCCGCTCCCATATTCGTAAGG	60.338	57.143	0.00	0.00	38.47	2.69
254	255	1.429463	CGCTCCCATATTCGTAAGGC	58.571	55.000	0.00	0.00	38.47	4.35
255	256	1.809684	GCTCCCATATTCGTAAGGCC	58.190	55.000	0.00	0.00	38.47	5.19
256	257	1.348036	GCTCCCATATTCGTAAGGCCT	59.652	52.381	0.00	0.00	38.47	5.19
257	258	2.565834	GCTCCCATATTCGTAAGGCCTA	59.434	50.000	5.16	0.00	38.47	3.93
258	259	3.197983	GCTCCCATATTCGTAAGGCCTAT	59.802	47.826	5.16	0.00	38.47	2.57
259	260	4.759782	CTCCCATATTCGTAAGGCCTATG	58.240	47.826	5.16	3.70	38.47	2.23
260	261	4.422057	TCCCATATTCGTAAGGCCTATGA	58.578	43.478	5.16	0.53	38.47	2.15
261	262	4.841813	TCCCATATTCGTAAGGCCTATGAA	59.158	41.667	5.16	11.38	39.36	2.57
262	263	5.487488	TCCCATATTCGTAAGGCCTATGAAT	59.513	40.000	22.94	22.94	44.79	2.57
263	264	6.012858	TCCCATATTCGTAAGGCCTATGAATT	60.013	38.462	23.97	13.68	41.55	2.17
264	265	6.659242	CCCATATTCGTAAGGCCTATGAATTT	59.341	38.462	23.97	16.89	41.55	1.82
265	266	7.176690	CCCATATTCGTAAGGCCTATGAATTTT	59.823	37.037	23.97	13.98	41.55	1.82
266	267	8.023128	CCATATTCGTAAGGCCTATGAATTTTG	58.977	37.037	23.97	20.78	41.55	2.44
267	268	8.567948	CATATTCGTAAGGCCTATGAATTTTGT	58.432	33.333	23.97	9.75	41.55	2.83
268	269	5.811399	TCGTAAGGCCTATGAATTTTGTG	57.189	39.130	5.16	0.00	38.47	3.33
269	270	5.250200	TCGTAAGGCCTATGAATTTTGTGT	58.750	37.500	5.16	0.00	38.47	3.72
270	271	5.708230	TCGTAAGGCCTATGAATTTTGTGTT	59.292	36.000	5.16	0.00	38.47	3.32
271	272	6.207810	TCGTAAGGCCTATGAATTTTGTGTTT	59.792	34.615	5.16	0.00	38.47	2.83
272	273	6.307800	CGTAAGGCCTATGAATTTTGTGTTTG	59.692	38.462	5.16	0.00	0.00	2.93
273	274	6.418057	AAGGCCTATGAATTTTGTGTTTGA	57.582	33.333	5.16	0.00	0.00	2.69
274	275	6.029346	AGGCCTATGAATTTTGTGTTTGAG	57.971	37.500	1.29	0.00	0.00	3.02
275	276	5.539955	AGGCCTATGAATTTTGTGTTTGAGT	59.460	36.000	1.29	0.00	0.00	3.41
276	277	5.863935	GGCCTATGAATTTTGTGTTTGAGTC	59.136	40.000	0.00	0.00	0.00	3.36
277	278	6.446318	GCCTATGAATTTTGTGTTTGAGTCA	58.554	36.000	0.00	0.00	0.00	3.41
278	279	6.363357	GCCTATGAATTTTGTGTTTGAGTCAC	59.637	38.462	0.00	0.00	36.48	3.67
279	280	6.863126	CCTATGAATTTTGTGTTTGAGTCACC	59.137	38.462	0.00	0.00	35.25	4.02
280	281	5.651387	TGAATTTTGTGTTTGAGTCACCA	57.349	34.783	0.00	0.00	35.25	4.17
281	282	6.219417	TGAATTTTGTGTTTGAGTCACCAT	57.781	33.333	0.00	0.00	35.25	3.55
282	283	6.638610	TGAATTTTGTGTTTGAGTCACCATT	58.361	32.000	0.00	0.00	35.25	3.16
283	284	7.102346	TGAATTTTGTGTTTGAGTCACCATTT	58.898	30.769	0.00	0.00	35.25	2.32
284	285	7.605691	TGAATTTTGTGTTTGAGTCACCATTTT	59.394	29.630	0.00	0.00	35.25	1.82
285	286	6.718454	TTTTGTGTTTGAGTCACCATTTTG	57.282	33.333	0.00	0.00	35.25	2.44
286	287	5.398603	TTGTGTTTGAGTCACCATTTTGT	57.601	34.783	0.00	0.00	35.25	2.83
287	288	6.516739	TTGTGTTTGAGTCACCATTTTGTA	57.483	33.333	0.00	0.00	35.25	2.41
288	289	6.516739	TGTGTTTGAGTCACCATTTTGTAA	57.483	33.333	0.00	0.00	35.25	2.41
289	290	6.559810	TGTGTTTGAGTCACCATTTTGTAAG	58.440	36.000	0.00	0.00	35.25	2.34
290	291	6.151985	TGTGTTTGAGTCACCATTTTGTAAGT	59.848	34.615	0.00	0.00	35.25	2.24
291	292	6.472163	GTGTTTGAGTCACCATTTTGTAAGTG	59.528	38.462	0.00	0.00	0.00	3.16
292	293	6.151985	TGTTTGAGTCACCATTTTGTAAGTGT	59.848	34.615	0.00	0.00	0.00	3.55
293	294	5.749596	TGAGTCACCATTTTGTAAGTGTG	57.250	39.130	0.00	0.00	0.00	3.82
294	295	5.189928	TGAGTCACCATTTTGTAAGTGTGT	58.810	37.500	0.00	0.00	0.00	3.72
295	296	5.295787	TGAGTCACCATTTTGTAAGTGTGTC	59.704	40.000	0.00	0.00	0.00	3.67
296	297	4.578928	AGTCACCATTTTGTAAGTGTGTCC	59.421	41.667	0.00	0.00	0.00	4.02
297	298	4.336993	GTCACCATTTTGTAAGTGTGTCCA	59.663	41.667	0.00	0.00	0.00	4.02
298	299	4.336993	TCACCATTTTGTAAGTGTGTCCAC	59.663	41.667	0.00	0.00	42.17	4.02
299	300	3.314080	ACCATTTTGTAAGTGTGTCCACG	59.686	43.478	0.00	0.00	46.56	4.94
300	301	3.314080	CCATTTTGTAAGTGTGTCCACGT	59.686	43.478	0.00	0.00	46.56	4.49
301	302	4.201970	CCATTTTGTAAGTGTGTCCACGTT	60.202	41.667	0.00	0.00	46.56	3.99
302	303	5.336744	CATTTTGTAAGTGTGTCCACGTTT	58.663	37.500	0.00	0.00	46.56	3.60
303	304	6.458478	CCATTTTGTAAGTGTGTCCACGTTTA	60.458	38.462	0.00	0.00	46.56	2.01
304	305	6.680874	TTTTGTAAGTGTGTCCACGTTTAT	57.319	33.333	0.00	0.00	46.56	1.40
305	306	7.783090	TTTTGTAAGTGTGTCCACGTTTATA	57.217	32.000	0.00	0.00	46.56	0.98
306	307	7.410800	TTTGTAAGTGTGTCCACGTTTATAG	57.589	36.000	0.00	0.00	46.56	1.31
307	308	6.088016	TGTAAGTGTGTCCACGTTTATAGT	57.912	37.500	0.00	0.00	46.56	2.12
308	309	6.514947	TGTAAGTGTGTCCACGTTTATAGTT	58.485	36.000	0.00	0.00	46.56	2.24
309	310	7.656412	TGTAAGTGTGTCCACGTTTATAGTTA	58.344	34.615	0.00	0.00	46.56	2.24
310	311	7.809331	TGTAAGTGTGTCCACGTTTATAGTTAG	59.191	37.037	0.00	0.00	46.56	2.34
311	312	5.717119	AGTGTGTCCACGTTTATAGTTAGG	58.283	41.667	0.00	0.00	46.56	2.69
312	313	4.866486	GTGTGTCCACGTTTATAGTTAGGG	59.134	45.833	0.00	0.00	0.00	3.53
313	314	4.771577	TGTGTCCACGTTTATAGTTAGGGA	59.228	41.667	0.00	0.00	0.00	4.20
314	315	5.245751	TGTGTCCACGTTTATAGTTAGGGAA	59.754	40.000	0.00	0.00	0.00	3.97
315	316	5.809051	GTGTCCACGTTTATAGTTAGGGAAG	59.191	44.000	0.00	0.00	0.00	3.46
316	317	5.716228	TGTCCACGTTTATAGTTAGGGAAGA	59.284	40.000	0.00	0.00	0.00	2.87
317	318	6.211184	TGTCCACGTTTATAGTTAGGGAAGAA	59.789	38.462	0.00	0.00	0.00	2.52
318	319	7.099120	GTCCACGTTTATAGTTAGGGAAGAAA	58.901	38.462	0.00	0.00	0.00	2.52
319	320	7.603784	GTCCACGTTTATAGTTAGGGAAGAAAA	59.396	37.037	0.00	0.00	0.00	2.29
320	321	7.820872	TCCACGTTTATAGTTAGGGAAGAAAAG	59.179	37.037	0.00	0.00	0.00	2.27
321	322	7.820872	CCACGTTTATAGTTAGGGAAGAAAAGA	59.179	37.037	0.00	0.00	0.00	2.52
322	323	9.211485	CACGTTTATAGTTAGGGAAGAAAAGAA	57.789	33.333	0.00	0.00	0.00	2.52
323	324	9.783081	ACGTTTATAGTTAGGGAAGAAAAGAAA	57.217	29.630	0.00	0.00	0.00	2.52
327	328	7.997773	ATAGTTAGGGAAGAAAAGAAACACC	57.002	36.000	0.00	0.00	0.00	4.16
328	329	4.820173	AGTTAGGGAAGAAAAGAAACACCG	59.180	41.667	0.00	0.00	0.00	4.94
329	330	3.570912	AGGGAAGAAAAGAAACACCGA	57.429	42.857	0.00	0.00	0.00	4.69
330	331	4.100279	AGGGAAGAAAAGAAACACCGAT	57.900	40.909	0.00	0.00	0.00	4.18
331	332	4.470602	AGGGAAGAAAAGAAACACCGATT	58.529	39.130	0.00	0.00	0.00	3.34
332	333	4.893524	AGGGAAGAAAAGAAACACCGATTT	59.106	37.500	0.00	0.00	0.00	2.17
333	334	5.362717	AGGGAAGAAAAGAAACACCGATTTT	59.637	36.000	0.00	0.00	0.00	1.82
334	335	5.690409	GGGAAGAAAAGAAACACCGATTTTC	59.310	40.000	0.00	0.00	40.36	2.29
335	336	6.270064	GGAAGAAAAGAAACACCGATTTTCA	58.730	36.000	10.74	0.00	41.76	2.69
336	337	6.923508	GGAAGAAAAGAAACACCGATTTTCAT	59.076	34.615	10.74	0.51	41.76	2.57
337	338	7.096065	GGAAGAAAAGAAACACCGATTTTCATG	60.096	37.037	10.74	0.00	41.76	3.07
338	339	7.038154	AGAAAAGAAACACCGATTTTCATGA	57.962	32.000	10.74	0.00	41.76	3.07
339	340	7.661040	AGAAAAGAAACACCGATTTTCATGAT	58.339	30.769	0.00	0.00	41.76	2.45
340	341	7.596248	AGAAAAGAAACACCGATTTTCATGATG	59.404	33.333	0.00	0.00	41.76	3.07
341	342	6.573664	AAGAAACACCGATTTTCATGATGA	57.426	33.333	0.00	0.00	35.72	2.92
342	343	5.942872	AGAAACACCGATTTTCATGATGAC	58.057	37.500	0.00	0.00	35.72	3.06
343	344	4.701956	AACACCGATTTTCATGATGACC	57.298	40.909	0.00	0.00	0.00	4.02
344	345	3.684908	ACACCGATTTTCATGATGACCA	58.315	40.909	0.00	0.00	0.00	4.02
345	346	4.078537	ACACCGATTTTCATGATGACCAA	58.921	39.130	0.00	0.00	0.00	3.67
346	347	4.522405	ACACCGATTTTCATGATGACCAAA	59.478	37.500	0.00	0.00	0.00	3.28
347	348	5.185635	ACACCGATTTTCATGATGACCAAAT	59.814	36.000	5.11	5.11	0.00	2.32
348	349	6.376864	ACACCGATTTTCATGATGACCAAATA	59.623	34.615	0.00	0.00	0.00	1.40
349	350	7.068593	ACACCGATTTTCATGATGACCAAATAT	59.931	33.333	0.00	0.00	0.00	1.28
350	351	7.380333	CACCGATTTTCATGATGACCAAATATG	59.620	37.037	0.00	3.49	0.00	1.78
351	352	7.068593	ACCGATTTTCATGATGACCAAATATGT	59.931	33.333	0.00	3.97	0.00	2.29
352	353	7.592533	CCGATTTTCATGATGACCAAATATGTC	59.407	37.037	0.00	0.00	0.00	3.06
353	354	7.592533	CGATTTTCATGATGACCAAATATGTCC	59.407	37.037	0.00	0.00	31.60	4.02
354	355	7.959658	TTTTCATGATGACCAAATATGTCCT	57.040	32.000	0.00	0.00	31.60	3.85
355	356	7.959658	TTTCATGATGACCAAATATGTCCTT	57.040	32.000	0.00	0.00	31.60	3.36
356	357	7.959658	TTCATGATGACCAAATATGTCCTTT	57.040	32.000	0.00	0.00	31.60	3.11
357	358	7.959658	TCATGATGACCAAATATGTCCTTTT	57.040	32.000	0.00	0.00	31.60	2.27
358	359	9.473007	TTCATGATGACCAAATATGTCCTTTTA	57.527	29.630	0.00	0.00	31.60	1.52
359	360	8.902806	TCATGATGACCAAATATGTCCTTTTAC	58.097	33.333	0.00	0.00	31.60	2.01
360	361	8.685427	CATGATGACCAAATATGTCCTTTTACA	58.315	33.333	0.00	0.00	31.60	2.41
361	362	8.821686	TGATGACCAAATATGTCCTTTTACAT	57.178	30.769	0.00	0.00	42.62	2.29
362	363	9.253832	TGATGACCAAATATGTCCTTTTACATT	57.746	29.630	0.00	0.00	40.52	2.71
364	365	9.874205	ATGACCAAATATGTCCTTTTACATTTG	57.126	29.630	0.00	0.00	40.52	2.32
365	366	8.310382	TGACCAAATATGTCCTTTTACATTTGG	58.690	33.333	17.86	17.86	46.02	3.28
367	368	8.477984	CCAAATATGTCCTTTTACATTTGGTG	57.522	34.615	13.29	1.67	40.95	4.17
368	369	8.310382	CCAAATATGTCCTTTTACATTTGGTGA	58.690	33.333	13.29	0.00	40.95	4.02
369	370	9.703892	CAAATATGTCCTTTTACATTTGGTGAA	57.296	29.630	0.00	0.00	40.52	3.18
377	378	9.632807	TCCTTTTACATTTGGTGAAATTTATCG	57.367	29.630	0.00	0.00	34.85	2.92
378	379	9.632807	CCTTTTACATTTGGTGAAATTTATCGA	57.367	29.630	0.00	0.00	34.85	3.59
383	384	8.742554	ACATTTGGTGAAATTTATCGAGAAAC	57.257	30.769	7.48	0.00	28.65	2.78
384	385	8.356657	ACATTTGGTGAAATTTATCGAGAAACA	58.643	29.630	7.48	0.00	28.65	2.83
385	386	9.190858	CATTTGGTGAAATTTATCGAGAAACAA	57.809	29.630	7.48	3.83	28.65	2.83
386	387	9.757227	ATTTGGTGAAATTTATCGAGAAACAAA	57.243	25.926	7.48	12.17	0.00	2.83
387	388	9.757227	TTTGGTGAAATTTATCGAGAAACAAAT	57.243	25.926	7.48	0.00	0.00	2.32
388	389	8.964420	TGGTGAAATTTATCGAGAAACAAATC	57.036	30.769	7.48	4.83	0.00	2.17
389	390	8.572185	TGGTGAAATTTATCGAGAAACAAATCA	58.428	29.630	7.48	7.22	0.00	2.57
390	391	9.405587	GGTGAAATTTATCGAGAAACAAATCAA	57.594	29.630	7.48	0.00	0.00	2.57
395	396	9.626045	AATTTATCGAGAAACAAATCAACTTCC	57.374	29.630	7.48	0.00	0.00	3.46
396	397	7.737972	TTATCGAGAAACAAATCAACTTCCA	57.262	32.000	0.00	0.00	0.00	3.53
397	398	6.633500	ATCGAGAAACAAATCAACTTCCAA	57.367	33.333	0.00	0.00	0.00	3.53
398	399	6.060028	TCGAGAAACAAATCAACTTCCAAG	57.940	37.500	0.00	0.00	0.00	3.61
399	400	5.820423	TCGAGAAACAAATCAACTTCCAAGA	59.180	36.000	0.00	0.00	0.00	3.02
400	401	6.486657	TCGAGAAACAAATCAACTTCCAAGAT	59.513	34.615	0.00	0.00	0.00	2.40
401	402	7.659799	TCGAGAAACAAATCAACTTCCAAGATA	59.340	33.333	0.00	0.00	0.00	1.98
402	403	7.746475	CGAGAAACAAATCAACTTCCAAGATAC	59.254	37.037	0.00	0.00	0.00	2.24
403	404	8.697507	AGAAACAAATCAACTTCCAAGATACT	57.302	30.769	0.00	0.00	0.00	2.12
404	405	8.571336	AGAAACAAATCAACTTCCAAGATACTG	58.429	33.333	0.00	0.00	0.00	2.74
405	406	7.823745	AACAAATCAACTTCCAAGATACTGT	57.176	32.000	0.00	0.00	0.00	3.55
406	407	8.918202	AACAAATCAACTTCCAAGATACTGTA	57.082	30.769	0.00	0.00	0.00	2.74
407	408	8.324163	ACAAATCAACTTCCAAGATACTGTAC	57.676	34.615	0.00	0.00	0.00	2.90
408	409	7.390718	ACAAATCAACTTCCAAGATACTGTACC	59.609	37.037	0.00	0.00	0.00	3.34
409	410	6.620877	ATCAACTTCCAAGATACTGTACCA	57.379	37.500	0.00	0.00	0.00	3.25
410	411	6.428083	TCAACTTCCAAGATACTGTACCAA	57.572	37.500	0.00	0.00	0.00	3.67
411	412	6.833041	TCAACTTCCAAGATACTGTACCAAA	58.167	36.000	0.00	0.00	0.00	3.28
412	413	7.458397	TCAACTTCCAAGATACTGTACCAAAT	58.542	34.615	0.00	0.00	0.00	2.32
413	414	8.598916	TCAACTTCCAAGATACTGTACCAAATA	58.401	33.333	0.00	0.00	0.00	1.40
414	415	9.226606	CAACTTCCAAGATACTGTACCAAATAA	57.773	33.333	0.00	0.00	0.00	1.40
415	416	9.802039	AACTTCCAAGATACTGTACCAAATAAA	57.198	29.630	0.00	0.00	0.00	1.40
416	417	9.975218	ACTTCCAAGATACTGTACCAAATAAAT	57.025	29.630	0.00	0.00	0.00	1.40
423	424	9.538508	AGATACTGTACCAAATAAATTACGTCC	57.461	33.333	0.00	0.00	0.00	4.79
424	425	9.316730	GATACTGTACCAAATAAATTACGTCCA	57.683	33.333	0.00	0.00	0.00	4.02
425	426	7.982761	ACTGTACCAAATAAATTACGTCCAA	57.017	32.000	0.00	0.00	0.00	3.53
426	427	8.393671	ACTGTACCAAATAAATTACGTCCAAA	57.606	30.769	0.00	0.00	0.00	3.28
427	428	8.848182	ACTGTACCAAATAAATTACGTCCAAAA	58.152	29.630	0.00	0.00	0.00	2.44
428	429	9.120422	CTGTACCAAATAAATTACGTCCAAAAC	57.880	33.333	0.00	0.00	0.00	2.43
429	430	8.848182	TGTACCAAATAAATTACGTCCAAAACT	58.152	29.630	0.00	0.00	0.00	2.66
430	431	9.681692	GTACCAAATAAATTACGTCCAAAACTT	57.318	29.630	0.00	0.00	0.00	2.66
432	433	9.251792	ACCAAATAAATTACGTCCAAAACTTTC	57.748	29.630	0.00	0.00	0.00	2.62
433	434	9.250624	CCAAATAAATTACGTCCAAAACTTTCA	57.749	29.630	0.00	0.00	0.00	2.69
460	461	8.606040	AAAATTGATTGATACAAAACCAGTGG	57.394	30.769	7.91	7.91	0.00	4.00
461	462	6.916360	ATTGATTGATACAAAACCAGTGGT	57.084	33.333	9.70	9.70	37.65	4.16
462	463	5.957842	TGATTGATACAAAACCAGTGGTC	57.042	39.130	17.06	1.13	33.12	4.02
463	464	4.764823	TGATTGATACAAAACCAGTGGTCC	59.235	41.667	17.06	0.09	33.12	4.46
464	465	4.447138	TTGATACAAAACCAGTGGTCCT	57.553	40.909	17.06	2.76	33.12	3.85
519	520	7.697691	AGATTTCACATTTAGCCGTTGATTAG	58.302	34.615	0.00	0.00	0.00	1.73
570	575	1.891919	CACTCCCACCAACACACCG	60.892	63.158	0.00	0.00	0.00	4.94
573	578	3.286751	CCCACCAACACACCGCAG	61.287	66.667	0.00	0.00	0.00	5.18
635	649	0.605589	CAAGTCTGAACCCGCTCTCT	59.394	55.000	0.00	0.00	0.00	3.10
661	681	1.682344	GCCCACCATTTCCACTCCC	60.682	63.158	0.00	0.00	0.00	4.30
662	682	1.773635	CCCACCATTTCCACTCCCA	59.226	57.895	0.00	0.00	0.00	4.37
912	956	2.243810	CGGAGAAATTCCCCACCAAAA	58.756	47.619	0.00	0.00	43.63	2.44
939	983	1.866925	CTTTTTCCGACTCCACCGC	59.133	57.895	0.00	0.00	0.00	5.68
1838	1906	1.892819	CGAAGCTGGGGAAGAGCTCA	61.893	60.000	17.77	0.00	46.32	4.26
2094	2164	7.147880	TGGTAGTAGAGGAACATAGCTTTCTTC	60.148	40.741	0.00	0.00	31.00	2.87
2531	2613	6.925165	TCAATGCAGTTTCAATTCTTTCTTCC	59.075	34.615	0.00	0.00	0.00	3.46
2554	2636	9.479549	TTCCTCCTTTCTTAAATTAATGCATCT	57.520	29.630	0.00	0.00	0.00	2.90
2604	2689	6.314917	ACTTGATTTTCTGTATCCCCTGTTT	58.685	36.000	0.00	0.00	0.00	2.83
2711	2796	2.283145	ATTCAGCAAGAACAGTGCCT	57.717	45.000	0.00	0.00	43.27	4.75
2797	2904	6.486657	TCAGACCCTGTTCTTGTAGAAAAATG	59.513	38.462	0.00	0.00	35.75	2.32
3730	3848	5.991606	CCCTGATGTCGCTGAATATTTCTTA	59.008	40.000	0.00	0.00	0.00	2.10
3806	4182	6.766467	CCTTACTTTAACCTGTTCACAGTCTT	59.234	38.462	6.22	0.31	42.27	3.01
3876	4252	5.894807	AGCAATACATGTGCAGTTTAATCC	58.105	37.500	9.11	0.00	44.74	3.01
3877	4253	5.043248	GCAATACATGTGCAGTTTAATCCC	58.957	41.667	9.11	0.00	41.80	3.85
3879	4255	6.498304	CAATACATGTGCAGTTTAATCCCTC	58.502	40.000	9.11	0.00	0.00	4.30
3909	4285	3.567478	ACCTGTCAATCTCATAAGGGC	57.433	47.619	0.00	0.00	0.00	5.19
3926	4302	1.970640	GGGCCTTTTGTGTTTCTGGAT	59.029	47.619	0.84	0.00	0.00	3.41
4111	4488	7.303182	TGAACCTTCAGAGAAAGATGTCTTA	57.697	36.000	0.00	0.00	32.50	2.10
4254	4631	5.157781	CAAGTAAACTCTCTTCCTGTCTCG	58.842	45.833	0.00	0.00	0.00	4.04
4275	4652	7.063544	GTCTCGTGTCTAAACTGCATCTAAATT	59.936	37.037	0.00	0.00	0.00	1.82
4287	4664	6.709846	ACTGCATCTAAATTCTTCTATCTGCC	59.290	38.462	0.00	0.00	0.00	4.85
4319	4696	7.492344	CAGTTTACCTGAAAAAGTCTTGCAATT	59.508	33.333	0.00	0.00	44.49	2.32
4371	4748	7.833682	TGGTATTGTGGAATGTATCTGTTGATT	59.166	33.333	0.00	0.00	34.32	2.57
4382	4759	7.340122	TGTATCTGTTGATTGTGGTGAAAAA	57.660	32.000	0.00	0.00	34.32	1.94
4396	4773	3.756434	GGTGAAAAAGCATAGCCACTGTA	59.244	43.478	0.00	0.00	0.00	2.74
4448	4826	1.523154	TAGGTTGCCTGCCTTTTGCG	61.523	55.000	0.00	0.00	45.60	4.85
4472	4850	3.499338	TGCATGGGTTGATGACTCTTTT	58.501	40.909	0.00	0.00	0.00	2.27
4475	4853	4.219288	GCATGGGTTGATGACTCTTTTCTT	59.781	41.667	0.00	0.00	0.00	2.52
4608	4986	3.750371	TGAAATGTTTGAGGATGTCCGT	58.250	40.909	0.00	0.00	42.08	4.69
4614	4992	2.509336	GAGGATGTCCGTGCGGTG	60.509	66.667	10.60	0.00	42.08	4.94
4623	5001	0.030235	TCCGTGCGGTGATATTCTCG	59.970	55.000	10.60	0.00	36.47	4.04
4740	5118	4.993028	AGGCCACAATCAGGTAAAGTAAA	58.007	39.130	5.01	0.00	0.00	2.01
4776	5154	2.557869	TGCTAAATGGTCCTGTAGGGT	58.442	47.619	0.00	0.00	36.25	4.34
4795	5173	7.675195	TGTAGGGTCTAACAATCTGGTAAACTA	59.325	37.037	0.00	0.00	0.00	2.24
4796	5174	7.563724	AGGGTCTAACAATCTGGTAAACTAA	57.436	36.000	0.00	0.00	0.00	2.24
4798	5176	8.101419	AGGGTCTAACAATCTGGTAAACTAAAG	58.899	37.037	0.00	0.00	0.00	1.85
4799	5177	7.336176	GGGTCTAACAATCTGGTAAACTAAAGG	59.664	40.741	0.00	0.00	0.00	3.11
4831	5262	6.100404	AGCTAAGCTCAATTCCTAGATGAG	57.900	41.667	0.00	1.05	42.70	2.90
4847	5278	9.344772	TCCTAGATGAGAACTTACTGAATCTAC	57.655	37.037	0.00	0.00	0.00	2.59
4878	5309	3.239253	AGGCACCCGTCTTTCCGT	61.239	61.111	0.00	0.00	0.00	4.69
4956	5387	2.147387	GTCCCCACTCACCACCTGT	61.147	63.158	0.00	0.00	0.00	4.00
4997	5428	3.357079	GCTCCGCACCCACAACAG	61.357	66.667	0.00	0.00	0.00	3.16
5043	5474	5.592104	TCTTCTATGTGGCGATGAAGTTA	57.408	39.130	0.00	0.00	36.49	2.24
5143	5574	0.038159	CGAGGCCTTCCGATACATCC	60.038	60.000	6.77	0.00	37.47	3.51
5320	5754	4.760878	TGTTGTTGCTAGTTGTACAGTGA	58.239	39.130	0.00	0.00	0.00	3.41
5742	6213	6.413892	TCTTTTGCCTGAAAAACTTCCAATT	58.586	32.000	0.00	0.00	33.04	2.32
5847	6318	4.749310	AGCACTGAAGCGAGCCGG	62.749	66.667	0.00	0.00	40.15	6.13
5903	6374	1.677052	GCCGGACAAACCTTGTTGTAA	59.323	47.619	5.05	0.00	45.52	2.41
5908	6379	5.646360	CCGGACAAACCTTGTTGTAATAGAT	59.354	40.000	0.00	0.00	45.52	1.98
5924	6395	7.052248	TGTAATAGATAGTCAGGAAGTCGTCA	58.948	38.462	0.00	0.00	0.00	4.35
6029	6501	1.324718	CACGAACGAAGACGAACGAT	58.675	50.000	15.27	0.00	42.66	3.73
6054	6526	1.134280	AGATCCGAGCAAATCCACCAG	60.134	52.381	0.00	0.00	0.00	4.00
6076	6548	0.891373	ACAGATCCACCAGAGACACG	59.109	55.000	0.00	0.00	0.00	4.49
6079	6551	0.173708	GATCCACCAGAGACACGACC	59.826	60.000	0.00	0.00	0.00	4.79
6179	6673	0.179020	CTGAGCAGGACACAAACCCA	60.179	55.000	0.00	0.00	0.00	4.51
6187	6681	3.932089	CAGGACACAAACCCAAACAAAAG	59.068	43.478	0.00	0.00	0.00	2.27
6188	6682	2.675844	GGACACAAACCCAAACAAAAGC	59.324	45.455	0.00	0.00	0.00	3.51
6191	6685	2.602660	CACAAACCCAAACAAAAGCTCG	59.397	45.455	0.00	0.00	0.00	5.03

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
1	2	1.385999	GTTTTGTGCTTTCGTCTCGC	58.614	50.000	0.00	0.00	0.00	5.03
3	4	2.625828	GTCGTTTTGTGCTTTCGTCTC	58.374	47.619	0.00	0.00	0.00	3.36
6	7	1.000884	TCGTCGTTTTGTGCTTTCGT	58.999	45.000	0.00	0.00	0.00	3.85
8	9	5.180377	CAAAAATCGTCGTTTTGTGCTTTC	58.820	37.500	11.09	0.00	39.85	2.62
9	10	5.124847	CAAAAATCGTCGTTTTGTGCTTT	57.875	34.783	11.09	0.00	39.85	3.51
15	16	5.838127	ACAACAACAAAAATCGTCGTTTTG	58.162	33.333	15.58	15.58	46.63	2.44
17	18	6.292873	CAAACAACAACAAAAATCGTCGTTT	58.707	32.000	0.00	0.00	0.00	3.60
18	19	5.164041	CCAAACAACAACAAAAATCGTCGTT	60.164	36.000	0.00	0.00	0.00	3.85
19	20	4.324936	CCAAACAACAACAAAAATCGTCGT	59.675	37.500	0.00	0.00	0.00	4.34
20	21	4.559251	TCCAAACAACAACAAAAATCGTCG	59.441	37.500	0.00	0.00	0.00	5.12
21	22	6.396459	TTCCAAACAACAACAAAAATCGTC	57.604	33.333	0.00	0.00	0.00	4.20
22	23	6.425417	AGTTTCCAAACAACAACAAAAATCGT	59.575	30.769	5.03	0.00	41.30	3.73
23	24	6.826612	AGTTTCCAAACAACAACAAAAATCG	58.173	32.000	5.03	0.00	41.30	3.34
24	25	8.931775	AGTAGTTTCCAAACAACAACAAAAATC	58.068	29.630	5.03	0.00	41.30	2.17
25	26	8.840833	AGTAGTTTCCAAACAACAACAAAAAT	57.159	26.923	5.03	0.00	41.30	1.82
26	27	8.664211	AAGTAGTTTCCAAACAACAACAAAAA	57.336	26.923	5.03	0.00	41.30	1.94
27	28	8.664211	AAAGTAGTTTCCAAACAACAACAAAA	57.336	26.923	5.03	0.00	41.30	2.44
28	29	8.664211	AAAAGTAGTTTCCAAACAACAACAAA	57.336	26.923	5.03	0.00	41.30	2.83
29	30	9.930693	ATAAAAGTAGTTTCCAAACAACAACAA	57.069	25.926	5.03	0.00	41.30	2.83
30	31	9.360093	CATAAAAGTAGTTTCCAAACAACAACA	57.640	29.630	5.03	0.00	41.30	3.33
31	32	9.575783	TCATAAAAGTAGTTTCCAAACAACAAC	57.424	29.630	5.03	0.00	41.30	3.32
32	33	9.796120	CTCATAAAAGTAGTTTCCAAACAACAA	57.204	29.630	5.03	0.00	41.30	2.83
33	34	9.179909	TCTCATAAAAGTAGTTTCCAAACAACA	57.820	29.630	5.03	0.00	41.30	3.33
34	35	9.665264	CTCTCATAAAAGTAGTTTCCAAACAAC	57.335	33.333	5.03	0.00	41.30	3.32
35	36	9.403583	ACTCTCATAAAAGTAGTTTCCAAACAA	57.596	29.630	5.03	0.00	41.30	2.83
36	37	8.836413	CACTCTCATAAAAGTAGTTTCCAAACA	58.164	33.333	5.03	0.00	41.30	2.83
37	38	8.290325	CCACTCTCATAAAAGTAGTTTCCAAAC	58.710	37.037	0.00	0.00	39.17	2.93
38	39	7.996644	ACCACTCTCATAAAAGTAGTTTCCAAA	59.003	33.333	0.00	0.00	0.00	3.28
39	40	7.514721	ACCACTCTCATAAAAGTAGTTTCCAA	58.485	34.615	0.00	0.00	0.00	3.53
40	41	7.074653	ACCACTCTCATAAAAGTAGTTTCCA	57.925	36.000	0.00	0.00	0.00	3.53
48	49	9.331282	GAGCAATTATACCACTCTCATAAAAGT	57.669	33.333	0.00	0.00	0.00	2.66
49	50	9.553064	AGAGCAATTATACCACTCTCATAAAAG	57.447	33.333	0.00	0.00	32.30	2.27
60	61	9.084164	CGGTGTAATATAGAGCAATTATACCAC	57.916	37.037	16.29	4.69	44.11	4.16
61	62	7.762615	GCGGTGTAATATAGAGCAATTATACCA	59.237	37.037	16.29	0.00	44.11	3.25
62	63	7.224167	GGCGGTGTAATATAGAGCAATTATACC	59.776	40.741	9.63	9.63	42.18	2.73
63	64	7.762615	TGGCGGTGTAATATAGAGCAATTATAC	59.237	37.037	0.00	0.00	32.18	1.47
64	65	7.842982	TGGCGGTGTAATATAGAGCAATTATA	58.157	34.615	0.00	0.00	0.00	0.98
65	66	6.707290	TGGCGGTGTAATATAGAGCAATTAT	58.293	36.000	0.00	0.00	0.00	1.28
66	67	6.104146	TGGCGGTGTAATATAGAGCAATTA	57.896	37.500	0.00	0.00	0.00	1.40
67	68	4.968259	TGGCGGTGTAATATAGAGCAATT	58.032	39.130	0.00	0.00	0.00	2.32
68	69	4.617253	TGGCGGTGTAATATAGAGCAAT	57.383	40.909	0.00	0.00	0.00	3.56
69	70	4.124238	GTTGGCGGTGTAATATAGAGCAA	58.876	43.478	0.00	0.00	0.00	3.91
70	71	3.493699	GGTTGGCGGTGTAATATAGAGCA	60.494	47.826	0.00	0.00	0.00	4.26
71	72	3.064931	GGTTGGCGGTGTAATATAGAGC	58.935	50.000	0.00	0.00	0.00	4.09
72	73	3.556423	GGGGTTGGCGGTGTAATATAGAG	60.556	52.174	0.00	0.00	0.00	2.43
73	74	2.369532	GGGGTTGGCGGTGTAATATAGA	59.630	50.000	0.00	0.00	0.00	1.98
74	75	2.774687	GGGGTTGGCGGTGTAATATAG	58.225	52.381	0.00	0.00	0.00	1.31
75	76	1.070445	CGGGGTTGGCGGTGTAATATA	59.930	52.381	0.00	0.00	0.00	0.86
76	77	0.179040	CGGGGTTGGCGGTGTAATAT	60.179	55.000	0.00	0.00	0.00	1.28
77	78	1.221293	CGGGGTTGGCGGTGTAATA	59.779	57.895	0.00	0.00	0.00	0.98
78	79	2.045731	CGGGGTTGGCGGTGTAAT	60.046	61.111	0.00	0.00	0.00	1.89
87	88	4.114997	GATTGCGTGCGGGGTTGG	62.115	66.667	0.00	0.00	0.00	3.77
88	89	4.114997	GGATTGCGTGCGGGGTTG	62.115	66.667	0.00	0.00	0.00	3.77
89	90	4.344865	AGGATTGCGTGCGGGGTT	62.345	61.111	0.00	0.00	0.00	4.11
90	91	4.778143	GAGGATTGCGTGCGGGGT	62.778	66.667	0.00	0.00	0.00	4.95
98	99	1.368641	TCAAATGACGGAGGATTGCG	58.631	50.000	0.00	0.00	44.43	4.85
99	100	2.749621	ACTTCAAATGACGGAGGATTGC	59.250	45.455	0.00	0.00	0.00	3.56
100	101	6.314784	GTTAACTTCAAATGACGGAGGATTG	58.685	40.000	0.00	0.00	0.00	2.67
101	102	5.414765	GGTTAACTTCAAATGACGGAGGATT	59.585	40.000	5.42	0.00	0.00	3.01
102	103	4.941873	GGTTAACTTCAAATGACGGAGGAT	59.058	41.667	5.42	0.00	0.00	3.24
103	104	4.320870	GGTTAACTTCAAATGACGGAGGA	58.679	43.478	5.42	0.00	0.00	3.71
104	105	3.439129	GGGTTAACTTCAAATGACGGAGG	59.561	47.826	5.42	0.00	0.00	4.30
105	106	4.324267	AGGGTTAACTTCAAATGACGGAG	58.676	43.478	5.42	0.00	0.00	4.63
106	107	4.202377	TGAGGGTTAACTTCAAATGACGGA	60.202	41.667	5.42	0.00	0.00	4.69
107	108	4.069304	TGAGGGTTAACTTCAAATGACGG	58.931	43.478	5.42	0.00	0.00	4.79
108	109	5.682943	TTGAGGGTTAACTTCAAATGACG	57.317	39.130	17.73	0.00	0.00	4.35
109	110	8.561738	TCTATTGAGGGTTAACTTCAAATGAC	57.438	34.615	21.40	0.00	0.00	3.06
110	111	9.177608	CATCTATTGAGGGTTAACTTCAAATGA	57.822	33.333	21.40	20.48	0.00	2.57
111	112	8.408601	CCATCTATTGAGGGTTAACTTCAAATG	58.591	37.037	21.40	19.43	39.15	2.32
112	113	8.336235	TCCATCTATTGAGGGTTAACTTCAAAT	58.664	33.333	21.40	12.79	43.95	2.32
113	114	7.695055	TCCATCTATTGAGGGTTAACTTCAAA	58.305	34.615	21.40	11.58	43.95	2.69
114	115	7.037586	ACTCCATCTATTGAGGGTTAACTTCAA	60.038	37.037	20.46	20.46	43.95	2.69
115	116	6.443849	ACTCCATCTATTGAGGGTTAACTTCA	59.556	38.462	7.71	7.33	43.95	3.02
116	117	6.763610	CACTCCATCTATTGAGGGTTAACTTC	59.236	42.308	7.71	4.80	43.95	3.01
117	118	6.443849	TCACTCCATCTATTGAGGGTTAACTT	59.556	38.462	7.71	0.00	43.95	2.66
118	119	5.964477	TCACTCCATCTATTGAGGGTTAACT	59.036	40.000	7.71	0.00	43.95	2.24
119	120	6.235231	TCACTCCATCTATTGAGGGTTAAC	57.765	41.667	7.71	0.00	43.95	2.01
120	121	6.126768	CCTTCACTCCATCTATTGAGGGTTAA	60.127	42.308	7.71	0.00	43.95	2.01
121	122	5.366768	CCTTCACTCCATCTATTGAGGGTTA	59.633	44.000	7.71	0.00	43.95	2.85
122	123	4.164988	CCTTCACTCCATCTATTGAGGGTT	59.835	45.833	7.71	0.00	43.95	4.11
123	124	3.713764	CCTTCACTCCATCTATTGAGGGT	59.286	47.826	7.71	0.00	43.95	4.34
124	125	3.072184	CCCTTCACTCCATCTATTGAGGG	59.928	52.174	1.10	1.10	44.83	4.30
125	126	3.969976	TCCCTTCACTCCATCTATTGAGG	59.030	47.826	0.00	0.00	32.80	3.86
126	127	4.040217	CCTCCCTTCACTCCATCTATTGAG	59.960	50.000	0.00	0.00	34.73	3.02
127	128	3.969976	CCTCCCTTCACTCCATCTATTGA	59.030	47.826	0.00	0.00	0.00	2.57
128	129	3.072184	CCCTCCCTTCACTCCATCTATTG	59.928	52.174	0.00	0.00	0.00	1.90
129	130	3.321950	CCCTCCCTTCACTCCATCTATT	58.678	50.000	0.00	0.00	0.00	1.73
130	131	2.983296	CCCTCCCTTCACTCCATCTAT	58.017	52.381	0.00	0.00	0.00	1.98
131	132	1.692762	GCCCTCCCTTCACTCCATCTA	60.693	57.143	0.00	0.00	0.00	1.98
132	133	0.985490	GCCCTCCCTTCACTCCATCT	60.985	60.000	0.00	0.00	0.00	2.90
133	134	1.529309	GCCCTCCCTTCACTCCATC	59.471	63.158	0.00	0.00	0.00	3.51
134	135	2.370445	CGCCCTCCCTTCACTCCAT	61.370	63.158	0.00	0.00	0.00	3.41
135	136	2.822643	ATCGCCCTCCCTTCACTCCA	62.823	60.000	0.00	0.00	0.00	3.86
136	137	0.759436	TATCGCCCTCCCTTCACTCC	60.759	60.000	0.00	0.00	0.00	3.85
137	138	0.676736	CTATCGCCCTCCCTTCACTC	59.323	60.000	0.00	0.00	0.00	3.51
138	139	0.261991	TCTATCGCCCTCCCTTCACT	59.738	55.000	0.00	0.00	0.00	3.41
139	140	0.676736	CTCTATCGCCCTCCCTTCAC	59.323	60.000	0.00	0.00	0.00	3.18
140	141	0.470080	CCTCTATCGCCCTCCCTTCA	60.470	60.000	0.00	0.00	0.00	3.02
141	142	1.188871	CCCTCTATCGCCCTCCCTTC	61.189	65.000	0.00	0.00	0.00	3.46
142	143	1.152226	CCCTCTATCGCCCTCCCTT	60.152	63.158	0.00	0.00	0.00	3.95
143	144	1.665948	TTCCCTCTATCGCCCTCCCT	61.666	60.000	0.00	0.00	0.00	4.20
144	145	0.763223	TTTCCCTCTATCGCCCTCCC	60.763	60.000	0.00	0.00	0.00	4.30
145	146	1.129058	TTTTCCCTCTATCGCCCTCC	58.871	55.000	0.00	0.00	0.00	4.30
146	147	1.763545	AGTTTTCCCTCTATCGCCCTC	59.236	52.381	0.00	0.00	0.00	4.30
147	148	1.880941	AGTTTTCCCTCTATCGCCCT	58.119	50.000	0.00	0.00	0.00	5.19
148	149	3.832615	TTAGTTTTCCCTCTATCGCCC	57.167	47.619	0.00	0.00	0.00	6.13
149	150	5.007724	CACATTTAGTTTTCCCTCTATCGCC	59.992	44.000	0.00	0.00	0.00	5.54
150	151	5.585047	ACACATTTAGTTTTCCCTCTATCGC	59.415	40.000	0.00	0.00	0.00	4.58
151	152	7.611213	AACACATTTAGTTTTCCCTCTATCG	57.389	36.000	0.00	0.00	0.00	2.92
152	153	9.232473	AGAAACACATTTAGTTTTCCCTCTATC	57.768	33.333	0.00	0.00	39.15	2.08
153	154	9.232473	GAGAAACACATTTAGTTTTCCCTCTAT	57.768	33.333	0.00	0.00	39.15	1.98
154	155	7.664318	GGAGAAACACATTTAGTTTTCCCTCTA	59.336	37.037	0.00	0.00	39.15	2.43
155	156	6.490381	GGAGAAACACATTTAGTTTTCCCTCT	59.510	38.462	0.00	0.00	39.15	3.69
156	157	6.294564	GGGAGAAACACATTTAGTTTTCCCTC	60.295	42.308	19.87	11.42	43.52	4.30
157	158	5.538813	GGGAGAAACACATTTAGTTTTCCCT	59.461	40.000	19.87	5.53	43.52	4.20
158	159	5.279306	GGGGAGAAACACATTTAGTTTTCCC	60.279	44.000	19.42	19.42	44.55	3.97
159	160	5.303333	TGGGGAGAAACACATTTAGTTTTCC	59.697	40.000	0.00	0.00	39.15	3.13
160	161	6.213677	GTGGGGAGAAACACATTTAGTTTTC	58.786	40.000	0.00	0.00	39.15	2.29
161	162	5.221165	CGTGGGGAGAAACACATTTAGTTTT	60.221	40.000	0.00	0.00	39.15	2.43
162	163	4.277423	CGTGGGGAGAAACACATTTAGTTT	59.723	41.667	0.00	0.00	41.53	2.66
163	164	3.818773	CGTGGGGAGAAACACATTTAGTT	59.181	43.478	0.00	0.00	37.45	2.24
164	165	3.408634	CGTGGGGAGAAACACATTTAGT	58.591	45.455	0.00	0.00	37.45	2.24
165	166	2.747446	CCGTGGGGAGAAACACATTTAG	59.253	50.000	0.00	0.00	37.45	1.85
166	167	2.785562	CCGTGGGGAGAAACACATTTA	58.214	47.619	0.00	0.00	37.45	1.40
167	168	1.616159	CCGTGGGGAGAAACACATTT	58.384	50.000	0.00	0.00	37.45	2.32
168	169	0.893727	GCCGTGGGGAGAAACACATT	60.894	55.000	0.00	0.00	37.45	2.71
169	170	1.303317	GCCGTGGGGAGAAACACAT	60.303	57.895	0.00	0.00	37.45	3.21
170	171	2.112297	GCCGTGGGGAGAAACACA	59.888	61.111	0.00	0.00	37.45	3.72
171	172	1.833787	TAGGCCGTGGGGAGAAACAC	61.834	60.000	0.00	0.00	34.06	3.32
172	173	1.536907	TAGGCCGTGGGGAGAAACA	60.537	57.895	0.00	0.00	34.06	2.83
173	174	1.221021	CTAGGCCGTGGGGAGAAAC	59.779	63.158	0.00	0.00	34.06	2.78
174	175	0.041535	TACTAGGCCGTGGGGAGAAA	59.958	55.000	0.00	0.00	34.06	2.52
175	176	0.396695	CTACTAGGCCGTGGGGAGAA	60.397	60.000	0.00	0.00	34.06	2.87
176	177	1.229359	CTACTAGGCCGTGGGGAGA	59.771	63.158	0.00	0.00	34.06	3.71
177	178	0.396695	TTCTACTAGGCCGTGGGGAG	60.397	60.000	0.00	0.00	34.06	4.30
178	179	0.041535	TTTCTACTAGGCCGTGGGGA	59.958	55.000	0.00	0.00	34.06	4.81
179	180	0.177373	GTTTCTACTAGGCCGTGGGG	59.823	60.000	0.00	0.00	0.00	4.96
180	181	0.179119	CGTTTCTACTAGGCCGTGGG	60.179	60.000	0.00	0.00	0.00	4.61
181	182	0.179119	CCGTTTCTACTAGGCCGTGG	60.179	60.000	0.00	0.00	0.00	4.94
182	183	0.813184	TCCGTTTCTACTAGGCCGTG	59.187	55.000	0.00	0.00	0.00	4.94
183	184	1.407979	CATCCGTTTCTACTAGGCCGT	59.592	52.381	0.00	0.00	0.00	5.68
184	185	1.679680	TCATCCGTTTCTACTAGGCCG	59.320	52.381	0.00	0.00	0.00	6.13
185	186	2.546162	GCTCATCCGTTTCTACTAGGCC	60.546	54.545	0.00	0.00	0.00	5.19
186	187	2.362717	AGCTCATCCGTTTCTACTAGGC	59.637	50.000	0.00	0.00	0.00	3.93
187	188	4.500035	GGAAGCTCATCCGTTTCTACTAGG	60.500	50.000	0.00	0.00	0.00	3.02
188	189	4.339814	AGGAAGCTCATCCGTTTCTACTAG	59.660	45.833	0.00	0.00	44.60	2.57
189	190	4.279145	AGGAAGCTCATCCGTTTCTACTA	58.721	43.478	0.00	0.00	44.60	1.82
190	191	3.100671	AGGAAGCTCATCCGTTTCTACT	58.899	45.455	0.00	0.00	44.60	2.57
191	192	3.528597	AGGAAGCTCATCCGTTTCTAC	57.471	47.619	0.00	0.00	44.60	2.59
192	193	3.428999	CGAAGGAAGCTCATCCGTTTCTA	60.429	47.826	0.00	0.00	44.60	2.10
193	194	2.675317	CGAAGGAAGCTCATCCGTTTCT	60.675	50.000	0.00	0.00	44.60	2.52
194	195	1.661112	CGAAGGAAGCTCATCCGTTTC	59.339	52.381	0.00	0.00	44.60	2.78
195	196	1.726853	CGAAGGAAGCTCATCCGTTT	58.273	50.000	0.00	0.00	44.60	3.60
196	197	0.741221	GCGAAGGAAGCTCATCCGTT	60.741	55.000	0.00	0.00	44.60	4.44
197	198	1.153549	GCGAAGGAAGCTCATCCGT	60.154	57.895	0.00	0.00	44.60	4.69
198	199	1.884926	GGCGAAGGAAGCTCATCCG	60.885	63.158	0.00	0.00	44.60	4.18
199	200	1.524849	GGGCGAAGGAAGCTCATCC	60.525	63.158	0.00	0.00	39.96	3.51
200	201	1.221840	TGGGCGAAGGAAGCTCATC	59.778	57.895	0.00	0.00	40.63	2.92
201	202	3.403624	TGGGCGAAGGAAGCTCAT	58.596	55.556	0.00	0.00	40.63	2.90
202	203	2.347490	GTGGGCGAAGGAAGCTCA	59.653	61.111	0.00	0.00	43.70	4.26
203	204	2.815647	CGTGGGCGAAGGAAGCTC	60.816	66.667	0.00	0.00	41.33	4.09
204	205	4.394712	CCGTGGGCGAAGGAAGCT	62.395	66.667	0.00	0.00	41.33	3.74
215	216	3.754068	CATGATCATGCCCGTGGG	58.246	61.111	22.20	0.00	38.57	4.61
223	224	1.970114	GGGAGCGGGCATGATCATG	60.970	63.158	28.04	28.04	41.60	3.07
224	225	1.786407	ATGGGAGCGGGCATGATCAT	61.786	55.000	1.18	1.18	0.00	2.45
225	226	1.126948	TATGGGAGCGGGCATGATCA	61.127	55.000	0.00	0.00	0.00	2.92
226	227	0.254178	ATATGGGAGCGGGCATGATC	59.746	55.000	0.00	0.00	0.00	2.92
227	228	0.700564	AATATGGGAGCGGGCATGAT	59.299	50.000	0.00	0.00	0.00	2.45
228	229	0.036732	GAATATGGGAGCGGGCATGA	59.963	55.000	0.00	0.00	0.00	3.07
229	230	1.300971	CGAATATGGGAGCGGGCATG	61.301	60.000	0.00	0.00	0.00	4.06
230	231	1.003355	CGAATATGGGAGCGGGCAT	60.003	57.895	0.00	0.00	0.00	4.40
231	232	1.116536	TACGAATATGGGAGCGGGCA	61.117	55.000	0.00	0.00	0.00	5.36
232	233	0.034337	TTACGAATATGGGAGCGGGC	59.966	55.000	0.00	0.00	0.00	6.13
233	234	1.337823	CCTTACGAATATGGGAGCGGG	60.338	57.143	0.00	0.00	0.00	6.13
234	235	1.939838	GCCTTACGAATATGGGAGCGG	60.940	57.143	0.00	0.00	0.00	5.52
235	236	1.429463	GCCTTACGAATATGGGAGCG	58.571	55.000	0.00	0.00	0.00	5.03
236	237	1.348036	AGGCCTTACGAATATGGGAGC	59.652	52.381	0.00	0.00	0.00	4.70
237	238	4.466370	TCATAGGCCTTACGAATATGGGAG	59.534	45.833	12.58	0.00	0.00	4.30
238	239	4.422057	TCATAGGCCTTACGAATATGGGA	58.578	43.478	12.58	0.00	0.00	4.37
239	240	4.819105	TCATAGGCCTTACGAATATGGG	57.181	45.455	12.58	0.00	0.00	4.00
240	241	7.687941	AAATTCATAGGCCTTACGAATATGG	57.312	36.000	12.58	0.00	0.00	2.74
241	242	8.567948	ACAAAATTCATAGGCCTTACGAATATG	58.432	33.333	12.58	18.91	0.00	1.78
242	243	8.567948	CACAAAATTCATAGGCCTTACGAATAT	58.432	33.333	12.58	7.15	0.00	1.28
243	244	7.554835	ACACAAAATTCATAGGCCTTACGAATA	59.445	33.333	12.58	0.00	0.00	1.75
244	245	6.377146	ACACAAAATTCATAGGCCTTACGAAT	59.623	34.615	12.58	14.14	0.00	3.34
245	246	5.708230	ACACAAAATTCATAGGCCTTACGAA	59.292	36.000	12.58	12.26	0.00	3.85
246	247	5.250200	ACACAAAATTCATAGGCCTTACGA	58.750	37.500	12.58	1.70	0.00	3.43
247	248	5.560966	ACACAAAATTCATAGGCCTTACG	57.439	39.130	12.58	0.00	0.00	3.18
248	249	7.375053	TCAAACACAAAATTCATAGGCCTTAC	58.625	34.615	12.58	0.00	0.00	2.34
249	250	7.232534	ACTCAAACACAAAATTCATAGGCCTTA	59.767	33.333	12.58	0.00	0.00	2.69
250	251	6.041979	ACTCAAACACAAAATTCATAGGCCTT	59.958	34.615	12.58	0.00	0.00	4.35
251	252	5.539955	ACTCAAACACAAAATTCATAGGCCT	59.460	36.000	11.78	11.78	0.00	5.19
252	253	5.783111	ACTCAAACACAAAATTCATAGGCC	58.217	37.500	0.00	0.00	0.00	5.19
253	254	6.363357	GTGACTCAAACACAAAATTCATAGGC	59.637	38.462	0.00	0.00	38.05	3.93
254	255	6.863126	GGTGACTCAAACACAAAATTCATAGG	59.137	38.462	0.00	0.00	39.65	2.57
255	256	7.424803	TGGTGACTCAAACACAAAATTCATAG	58.575	34.615	0.00	0.00	39.65	2.23
256	257	7.340122	TGGTGACTCAAACACAAAATTCATA	57.660	32.000	0.00	0.00	39.65	2.15
257	258	6.219417	TGGTGACTCAAACACAAAATTCAT	57.781	33.333	0.00	0.00	39.65	2.57
258	259	5.651387	TGGTGACTCAAACACAAAATTCA	57.349	34.783	0.00	0.00	39.65	2.57
259	260	7.538303	AAATGGTGACTCAAACACAAAATTC	57.462	32.000	0.00	0.00	39.65	2.17
260	261	7.390162	ACAAAATGGTGACTCAAACACAAAATT	59.610	29.630	0.00	0.00	39.65	1.82
261	262	6.878389	ACAAAATGGTGACTCAAACACAAAAT	59.122	30.769	0.00	0.00	39.65	1.82
262	263	6.226787	ACAAAATGGTGACTCAAACACAAAA	58.773	32.000	0.00	0.00	39.65	2.44
263	264	5.788450	ACAAAATGGTGACTCAAACACAAA	58.212	33.333	0.00	0.00	39.65	2.83
264	265	5.398603	ACAAAATGGTGACTCAAACACAA	57.601	34.783	0.00	0.00	39.65	3.33
265	266	6.151985	ACTTACAAAATGGTGACTCAAACACA	59.848	34.615	0.00	0.00	39.65	3.72
266	267	6.472163	CACTTACAAAATGGTGACTCAAACAC	59.528	38.462	0.00	0.00	37.51	3.32
267	268	6.151985	ACACTTACAAAATGGTGACTCAAACA	59.848	34.615	0.00	0.00	34.28	2.83
268	269	6.472163	CACACTTACAAAATGGTGACTCAAAC	59.528	38.462	0.00	0.00	34.28	2.93
269	270	6.151985	ACACACTTACAAAATGGTGACTCAAA	59.848	34.615	0.00	0.00	34.28	2.69
270	271	5.650266	ACACACTTACAAAATGGTGACTCAA	59.350	36.000	0.00	0.00	34.28	3.02
271	272	5.189928	ACACACTTACAAAATGGTGACTCA	58.810	37.500	0.00	0.00	34.28	3.41
272	273	5.277828	GGACACACTTACAAAATGGTGACTC	60.278	44.000	0.00	0.00	34.28	3.36
273	274	4.578928	GGACACACTTACAAAATGGTGACT	59.421	41.667	0.00	0.00	34.28	3.41
274	275	4.336993	TGGACACACTTACAAAATGGTGAC	59.663	41.667	0.00	0.00	34.28	3.67
275	276	4.336993	GTGGACACACTTACAAAATGGTGA	59.663	41.667	0.00	0.00	44.29	4.02
276	277	4.606961	GTGGACACACTTACAAAATGGTG	58.393	43.478	0.00	0.00	44.29	4.17
277	278	3.314080	CGTGGACACACTTACAAAATGGT	59.686	43.478	3.12	0.00	45.50	3.55
278	279	3.314080	ACGTGGACACACTTACAAAATGG	59.686	43.478	3.12	0.00	45.50	3.16
279	280	4.545823	ACGTGGACACACTTACAAAATG	57.454	40.909	3.12	0.00	45.50	2.32
280	281	5.570234	AAACGTGGACACACTTACAAAAT	57.430	34.783	3.12	0.00	45.50	1.82
281	282	6.680874	ATAAACGTGGACACACTTACAAAA	57.319	33.333	3.12	0.00	45.50	2.44
282	283	6.985645	ACTATAAACGTGGACACACTTACAAA	59.014	34.615	3.12	0.00	45.50	2.83
283	284	6.514947	ACTATAAACGTGGACACACTTACAA	58.485	36.000	3.12	0.00	45.50	2.41
284	285	6.088016	ACTATAAACGTGGACACACTTACA	57.912	37.500	3.12	0.00	45.50	2.41
285	286	7.274250	CCTAACTATAAACGTGGACACACTTAC	59.726	40.741	3.12	0.00	45.50	2.34
286	287	7.315142	CCTAACTATAAACGTGGACACACTTA	58.685	38.462	3.12	0.27	45.50	2.24
287	288	6.161381	CCTAACTATAAACGTGGACACACTT	58.839	40.000	3.12	0.00	45.50	3.16
288	289	5.337009	CCCTAACTATAAACGTGGACACACT	60.337	44.000	3.12	0.00	45.50	3.55
289	290	4.866486	CCCTAACTATAAACGTGGACACAC	59.134	45.833	3.12	0.00	44.23	3.82
290	291	4.771577	TCCCTAACTATAAACGTGGACACA	59.228	41.667	3.12	0.00	0.00	3.72
291	292	5.329035	TCCCTAACTATAAACGTGGACAC	57.671	43.478	0.00	0.00	0.00	3.67
292	293	5.716228	TCTTCCCTAACTATAAACGTGGACA	59.284	40.000	0.00	0.00	0.00	4.02
293	294	6.212888	TCTTCCCTAACTATAAACGTGGAC	57.787	41.667	0.00	0.00	0.00	4.02
294	295	6.855763	TTCTTCCCTAACTATAAACGTGGA	57.144	37.500	0.00	0.00	0.00	4.02
295	296	7.820872	TCTTTTCTTCCCTAACTATAAACGTGG	59.179	37.037	0.00	0.00	0.00	4.94
296	297	8.767478	TCTTTTCTTCCCTAACTATAAACGTG	57.233	34.615	0.00	0.00	0.00	4.49
297	298	9.783081	TTTCTTTTCTTCCCTAACTATAAACGT	57.217	29.630	0.00	0.00	0.00	3.99
301	302	9.511272	GGTGTTTCTTTTCTTCCCTAACTATAA	57.489	33.333	0.00	0.00	0.00	0.98
302	303	7.820872	CGGTGTTTCTTTTCTTCCCTAACTATA	59.179	37.037	0.00	0.00	0.00	1.31
303	304	6.653740	CGGTGTTTCTTTTCTTCCCTAACTAT	59.346	38.462	0.00	0.00	0.00	2.12
304	305	5.993441	CGGTGTTTCTTTTCTTCCCTAACTA	59.007	40.000	0.00	0.00	0.00	2.24
305	306	4.820173	CGGTGTTTCTTTTCTTCCCTAACT	59.180	41.667	0.00	0.00	0.00	2.24
306	307	4.818005	TCGGTGTTTCTTTTCTTCCCTAAC	59.182	41.667	0.00	0.00	0.00	2.34
307	308	5.038651	TCGGTGTTTCTTTTCTTCCCTAA	57.961	39.130	0.00	0.00	0.00	2.69
308	309	4.693042	TCGGTGTTTCTTTTCTTCCCTA	57.307	40.909	0.00	0.00	0.00	3.53
309	310	3.570912	TCGGTGTTTCTTTTCTTCCCT	57.429	42.857	0.00	0.00	0.00	4.20
310	311	4.848562	AATCGGTGTTTCTTTTCTTCCC	57.151	40.909	0.00	0.00	0.00	3.97
311	312	6.270064	TGAAAATCGGTGTTTCTTTTCTTCC	58.730	36.000	7.78	0.00	38.06	3.46
312	313	7.647715	TCATGAAAATCGGTGTTTCTTTTCTTC	59.352	33.333	0.00	0.00	38.06	2.87
313	314	7.488322	TCATGAAAATCGGTGTTTCTTTTCTT	58.512	30.769	0.00	0.49	38.06	2.52
314	315	7.038154	TCATGAAAATCGGTGTTTCTTTTCT	57.962	32.000	0.00	0.00	38.06	2.52
315	316	7.594758	TCATCATGAAAATCGGTGTTTCTTTTC	59.405	33.333	0.00	0.00	37.84	2.29
316	317	7.382218	GTCATCATGAAAATCGGTGTTTCTTTT	59.618	33.333	0.00	0.00	36.22	2.27
317	318	6.863126	GTCATCATGAAAATCGGTGTTTCTTT	59.137	34.615	0.00	0.00	36.22	2.52
318	319	6.381801	GTCATCATGAAAATCGGTGTTTCTT	58.618	36.000	0.00	0.69	36.22	2.52
319	320	5.106157	GGTCATCATGAAAATCGGTGTTTCT	60.106	40.000	0.00	0.00	36.22	2.52
320	321	5.095490	GGTCATCATGAAAATCGGTGTTTC	58.905	41.667	0.00	0.00	35.87	2.78
321	322	4.522405	TGGTCATCATGAAAATCGGTGTTT	59.478	37.500	0.00	0.00	0.00	2.83
322	323	4.078537	TGGTCATCATGAAAATCGGTGTT	58.921	39.130	0.00	0.00	0.00	3.32
323	324	3.684908	TGGTCATCATGAAAATCGGTGT	58.315	40.909	0.00	0.00	0.00	4.16
324	325	4.700268	TTGGTCATCATGAAAATCGGTG	57.300	40.909	0.00	0.00	0.00	4.94
325	326	5.920193	ATTTGGTCATCATGAAAATCGGT	57.080	34.783	0.00	0.00	0.00	4.69
326	327	7.428020	ACATATTTGGTCATCATGAAAATCGG	58.572	34.615	0.00	0.13	0.00	4.18
327	328	7.592533	GGACATATTTGGTCATCATGAAAATCG	59.407	37.037	0.00	0.00	37.00	3.34
328	329	8.636213	AGGACATATTTGGTCATCATGAAAATC	58.364	33.333	0.00	0.00	37.00	2.17
329	330	8.543293	AGGACATATTTGGTCATCATGAAAAT	57.457	30.769	0.00	3.50	37.00	1.82
330	331	7.959658	AGGACATATTTGGTCATCATGAAAA	57.040	32.000	0.00	0.00	37.00	2.29
331	332	7.959658	AAGGACATATTTGGTCATCATGAAA	57.040	32.000	0.00	0.00	37.00	2.69
332	333	7.959658	AAAGGACATATTTGGTCATCATGAA	57.040	32.000	0.00	0.00	37.00	2.57
333	334	7.959658	AAAAGGACATATTTGGTCATCATGA	57.040	32.000	0.00	0.00	37.00	3.07
334	335	8.685427	TGTAAAAGGACATATTTGGTCATCATG	58.315	33.333	0.00	0.00	37.00	3.07
335	336	8.821686	TGTAAAAGGACATATTTGGTCATCAT	57.178	30.769	0.00	0.00	37.00	2.45
336	337	8.821686	ATGTAAAAGGACATATTTGGTCATCA	57.178	30.769	0.00	0.00	38.29	3.07
338	339	9.874205	CAAATGTAAAAGGACATATTTGGTCAT	57.126	29.630	0.00	0.00	39.16	3.06
339	340	8.310382	CCAAATGTAAAAGGACATATTTGGTCA	58.690	33.333	14.99	0.00	40.96	4.02
340	341	8.702163	CCAAATGTAAAAGGACATATTTGGTC	57.298	34.615	14.99	0.00	40.96	4.02
342	343	8.310382	TCACCAAATGTAAAAGGACATATTTGG	58.690	33.333	19.40	19.40	46.09	3.28
343	344	9.703892	TTCACCAAATGTAAAAGGACATATTTG	57.296	29.630	0.00	0.00	39.16	2.32
351	352	9.632807	CGATAAATTTCACCAAATGTAAAAGGA	57.367	29.630	0.00	0.00	32.18	3.36
352	353	9.632807	TCGATAAATTTCACCAAATGTAAAAGG	57.367	29.630	0.00	0.00	32.18	3.11
357	358	9.834628	GTTTCTCGATAAATTTCACCAAATGTA	57.165	29.630	0.00	0.00	32.18	2.29
358	359	8.356657	TGTTTCTCGATAAATTTCACCAAATGT	58.643	29.630	0.00	0.00	32.18	2.71
359	360	8.741101	TGTTTCTCGATAAATTTCACCAAATG	57.259	30.769	0.00	0.00	32.18	2.32
360	361	9.757227	TTTGTTTCTCGATAAATTTCACCAAAT	57.243	25.926	0.00	0.00	33.27	2.32
361	362	9.757227	ATTTGTTTCTCGATAAATTTCACCAAA	57.243	25.926	0.00	5.01	0.00	3.28
362	363	9.405587	GATTTGTTTCTCGATAAATTTCACCAA	57.594	29.630	0.00	0.00	0.00	3.67
363	364	8.572185	TGATTTGTTTCTCGATAAATTTCACCA	58.428	29.630	0.00	0.00	0.00	4.17
364	365	8.964420	TGATTTGTTTCTCGATAAATTTCACC	57.036	30.769	0.00	0.00	0.00	4.02
369	370	9.626045	GGAAGTTGATTTGTTTCTCGATAAATT	57.374	29.630	0.00	0.00	0.00	1.82
370	371	8.792633	TGGAAGTTGATTTGTTTCTCGATAAAT	58.207	29.630	0.00	0.00	0.00	1.40
371	372	8.160521	TGGAAGTTGATTTGTTTCTCGATAAA	57.839	30.769	0.00	0.00	0.00	1.40
372	373	7.737972	TGGAAGTTGATTTGTTTCTCGATAA	57.262	32.000	0.00	0.00	0.00	1.75
373	374	7.659799	TCTTGGAAGTTGATTTGTTTCTCGATA	59.340	33.333	0.00	0.00	0.00	2.92
374	375	6.486657	TCTTGGAAGTTGATTTGTTTCTCGAT	59.513	34.615	0.00	0.00	0.00	3.59
375	376	5.820423	TCTTGGAAGTTGATTTGTTTCTCGA	59.180	36.000	0.00	0.00	0.00	4.04
376	377	6.060028	TCTTGGAAGTTGATTTGTTTCTCG	57.940	37.500	0.00	0.00	0.00	4.04
377	378	8.787852	AGTATCTTGGAAGTTGATTTGTTTCTC	58.212	33.333	0.00	0.00	0.00	2.87
378	379	8.571336	CAGTATCTTGGAAGTTGATTTGTTTCT	58.429	33.333	0.00	0.00	0.00	2.52
379	380	8.352942	ACAGTATCTTGGAAGTTGATTTGTTTC	58.647	33.333	0.00	0.00	0.00	2.78
380	381	8.237811	ACAGTATCTTGGAAGTTGATTTGTTT	57.762	30.769	0.00	0.00	0.00	2.83
381	382	7.823745	ACAGTATCTTGGAAGTTGATTTGTT	57.176	32.000	0.00	0.00	0.00	2.83
382	383	7.390718	GGTACAGTATCTTGGAAGTTGATTTGT	59.609	37.037	0.00	0.00	0.00	2.83
383	384	7.390440	TGGTACAGTATCTTGGAAGTTGATTTG	59.610	37.037	0.00	0.00	0.00	2.32
384	385	7.458397	TGGTACAGTATCTTGGAAGTTGATTT	58.542	34.615	0.00	0.00	0.00	2.17
385	386	7.016153	TGGTACAGTATCTTGGAAGTTGATT	57.984	36.000	0.00	0.00	0.00	2.57
386	387	6.620877	TGGTACAGTATCTTGGAAGTTGAT	57.379	37.500	0.00	0.00	0.00	2.57
387	388	6.428083	TTGGTACAGTATCTTGGAAGTTGA	57.572	37.500	0.00	0.00	42.39	3.18
388	389	7.687941	ATTTGGTACAGTATCTTGGAAGTTG	57.312	36.000	0.00	0.00	42.39	3.16
389	390	9.802039	TTTATTTGGTACAGTATCTTGGAAGTT	57.198	29.630	0.00	0.00	42.39	2.66
390	391	9.975218	ATTTATTTGGTACAGTATCTTGGAAGT	57.025	29.630	0.00	0.00	42.39	3.01
397	398	9.538508	GGACGTAATTTATTTGGTACAGTATCT	57.461	33.333	0.00	0.00	42.39	1.98
398	399	9.316730	TGGACGTAATTTATTTGGTACAGTATC	57.683	33.333	0.00	0.00	42.39	2.24
399	400	9.669887	TTGGACGTAATTTATTTGGTACAGTAT	57.330	29.630	0.00	0.00	42.39	2.12
400	401	9.499479	TTTGGACGTAATTTATTTGGTACAGTA	57.501	29.630	0.00	0.00	42.39	2.74
401	402	7.982761	TTGGACGTAATTTATTTGGTACAGT	57.017	32.000	0.00	0.00	42.39	3.55
402	403	9.120422	GTTTTGGACGTAATTTATTTGGTACAG	57.880	33.333	0.00	0.00	42.39	2.74
403	404	8.848182	AGTTTTGGACGTAATTTATTTGGTACA	58.152	29.630	0.00	0.00	0.00	2.90
404	405	9.681692	AAGTTTTGGACGTAATTTATTTGGTAC	57.318	29.630	0.00	0.00	0.00	3.34
406	407	9.251792	GAAAGTTTTGGACGTAATTTATTTGGT	57.748	29.630	0.00	0.00	0.00	3.67
407	408	9.250624	TGAAAGTTTTGGACGTAATTTATTTGG	57.749	29.630	0.00	0.00	0.00	3.28
434	435	9.054922	CCACTGGTTTTGTATCAATCAATTTTT	57.945	29.630	0.00	0.00	0.00	1.94
435	436	8.210265	ACCACTGGTTTTGTATCAATCAATTTT	58.790	29.630	0.00	0.00	27.29	1.82
436	437	7.734942	ACCACTGGTTTTGTATCAATCAATTT	58.265	30.769	0.00	0.00	27.29	1.82
437	438	7.301868	ACCACTGGTTTTGTATCAATCAATT	57.698	32.000	0.00	0.00	27.29	2.32
438	439	6.071391	GGACCACTGGTTTTGTATCAATCAAT	60.071	38.462	1.13	0.00	35.25	2.57
439	440	5.242838	GGACCACTGGTTTTGTATCAATCAA	59.757	40.000	1.13	0.00	35.25	2.57
440	441	4.764823	GGACCACTGGTTTTGTATCAATCA	59.235	41.667	1.13	0.00	35.25	2.57
441	442	5.010282	AGGACCACTGGTTTTGTATCAATC	58.990	41.667	1.13	0.00	35.25	2.67
442	443	4.998051	AGGACCACTGGTTTTGTATCAAT	58.002	39.130	1.13	0.00	35.25	2.57
443	444	4.447138	AGGACCACTGGTTTTGTATCAA	57.553	40.909	1.13	0.00	35.25	2.57
444	445	5.249622	TCATAGGACCACTGGTTTTGTATCA	59.750	40.000	1.13	0.00	35.25	2.15
445	446	5.741011	TCATAGGACCACTGGTTTTGTATC	58.259	41.667	1.13	0.00	35.25	2.24
446	447	5.772393	TCATAGGACCACTGGTTTTGTAT	57.228	39.130	1.13	0.00	35.25	2.29
447	448	5.310451	GTTCATAGGACCACTGGTTTTGTA	58.690	41.667	1.13	0.00	35.25	2.41
448	449	4.142038	GTTCATAGGACCACTGGTTTTGT	58.858	43.478	1.13	0.00	35.25	2.83
449	450	3.506067	GGTTCATAGGACCACTGGTTTTG	59.494	47.826	1.13	0.00	35.25	2.44
450	451	3.763057	GGTTCATAGGACCACTGGTTTT	58.237	45.455	1.13	0.00	35.25	2.43
451	452	2.290071	CGGTTCATAGGACCACTGGTTT	60.290	50.000	1.13	0.00	35.25	3.27
452	453	1.278127	CGGTTCATAGGACCACTGGTT	59.722	52.381	1.13	0.00	35.25	3.67
453	454	0.902531	CGGTTCATAGGACCACTGGT	59.097	55.000	0.00	0.00	39.44	4.00
454	455	0.178068	CCGGTTCATAGGACCACTGG	59.822	60.000	0.00	0.00	36.99	4.00
455	456	0.178068	CCCGGTTCATAGGACCACTG	59.822	60.000	0.00	0.00	36.99	3.66
456	457	0.042131	TCCCGGTTCATAGGACCACT	59.958	55.000	0.00	0.00	36.99	4.00
457	458	0.906775	TTCCCGGTTCATAGGACCAC	59.093	55.000	0.00	0.00	36.99	4.16
458	459	1.200519	CTTCCCGGTTCATAGGACCA	58.799	55.000	0.00	0.00	36.99	4.02
459	460	0.179054	GCTTCCCGGTTCATAGGACC	60.179	60.000	0.00	0.00	0.00	4.46
460	461	0.539986	TGCTTCCCGGTTCATAGGAC	59.460	55.000	0.00	0.00	0.00	3.85
461	462	0.830648	CTGCTTCCCGGTTCATAGGA	59.169	55.000	0.00	0.00	0.00	2.94
462	463	0.830648	TCTGCTTCCCGGTTCATAGG	59.169	55.000	0.00	0.00	0.00	2.57
463	464	1.757118	TCTCTGCTTCCCGGTTCATAG	59.243	52.381	0.00	0.00	0.00	2.23
464	465	1.757118	CTCTCTGCTTCCCGGTTCATA	59.243	52.381	0.00	0.00	0.00	2.15
493	494	5.957842	TCAACGGCTAAATGTGAAATCTT	57.042	34.783	0.00	0.00	0.00	2.40
500	501	4.882671	AGCTAATCAACGGCTAAATGTG	57.117	40.909	0.00	0.00	34.31	3.21
501	502	4.700213	ACAAGCTAATCAACGGCTAAATGT	59.300	37.500	0.00	0.00	35.06	2.71
557	562	3.286751	CCTGCGGTGTGTTGGTGG	61.287	66.667	0.00	0.00	0.00	4.61
573	578	2.117941	GATATTTCGCCGCTGGTGCC	62.118	60.000	3.64	0.00	35.36	5.01
635	649	1.910580	GAAATGGTGGGCGAGAGGGA	61.911	60.000	0.00	0.00	0.00	4.20
661	681	1.323534	CGAGATTTACCGCCGAACTTG	59.676	52.381	0.00	0.00	0.00	3.16
662	682	1.203052	TCGAGATTTACCGCCGAACTT	59.797	47.619	0.00	0.00	0.00	2.66
748	777	5.700832	GGAAAATCCAAATCTTTGTGGAACC	59.299	40.000	0.00	0.00	46.78	3.62
838	877	4.003788	CCTGGGCGACGGTCAAGT	62.004	66.667	9.10	0.00	0.00	3.16
893	932	2.567169	CCTTTTGGTGGGGAATTTCTCC	59.433	50.000	8.49	8.49	37.60	3.71
912	956	3.306849	GGAGTCGGAAAAAGCTCTAACCT	60.307	47.826	0.00	0.00	0.00	3.50
977	1022	4.150454	CCTCCCCTCCGCTCCTCT	62.150	72.222	0.00	0.00	0.00	3.69
984	1029	3.851184	ATCTCCCCCTCCCCTCCG	61.851	72.222	0.00	0.00	0.00	4.63
1560	1628	3.070878	TCATACTTGCTATCATCGGCCAA	59.929	43.478	2.24	0.00	0.00	4.52
1565	1633	5.126396	TCTGGTCATACTTGCTATCATCG	57.874	43.478	0.00	0.00	0.00	3.84
1673	1741	2.623418	TGCTCTCCCACTTCCTCTTA	57.377	50.000	0.00	0.00	0.00	2.10
1838	1906	3.324846	TGAGCAGCCGTGATAATATCCTT	59.675	43.478	0.00	0.00	0.00	3.36
2094	2164	7.483691	GGTTATTAGCAACGAATACAGGTTTTG	59.516	37.037	0.00	0.00	0.00	2.44
2604	2689	0.814457	AAACGTGTCAAAGGCTGCAA	59.186	45.000	0.50	0.00	0.00	4.08
2711	2796	9.042450	TGTATCCTTTTCTGGTCTAAGTATTCA	57.958	33.333	0.00	0.00	0.00	2.57
2797	2904	8.438676	ACATCTAACAGAACCTAATGCATTAC	57.561	34.615	15.21	5.92	0.00	1.89
3024	3132	9.375974	AGACTAATGTATAAATACCCACTAGCA	57.624	33.333	0.00	0.00	32.33	3.49
3730	3848	4.584638	TGGTTTGATGTATACCCTGCTT	57.415	40.909	0.00	0.00	0.00	3.91
3806	4182	7.637631	TGGTGCTGCATAATCTTTGTAATAA	57.362	32.000	5.27	0.00	0.00	1.40
3824	4200	4.818546	GTCATAATATGAAGTGCTGGTGCT	59.181	41.667	4.30	0.00	41.69	4.40
3876	4252	2.507484	TGACAGGTTGCATTTCTGAGG	58.493	47.619	15.36	0.00	33.19	3.86
3877	4253	4.458295	AGATTGACAGGTTGCATTTCTGAG	59.542	41.667	15.36	0.00	33.19	3.35
3879	4255	4.216902	TGAGATTGACAGGTTGCATTTCTG	59.783	41.667	9.11	9.11	34.91	3.02
3909	4285	5.049828	GGTGAAATCCAGAAACACAAAAGG	58.950	41.667	0.00	0.00	33.82	3.11
3926	4302	1.358152	AGGAAGGACGATGGGTGAAA	58.642	50.000	0.00	0.00	0.00	2.69
4111	4488	5.604231	TCCTTGTGATACTCCTTCAGCATAT	59.396	40.000	0.00	0.00	0.00	1.78
4254	4631	8.940952	AGAAGAATTTAGATGCAGTTTAGACAC	58.059	33.333	0.00	0.00	0.00	3.67
4275	4652	3.887352	ACTGTAGACGGCAGATAGAAGA	58.113	45.455	0.00	0.00	37.40	2.87
4283	4660	2.607187	CAGGTAAACTGTAGACGGCAG	58.393	52.381	0.00	0.00	42.42	4.85
4345	4722	6.716284	TCAACAGATACATTCCACAATACCA	58.284	36.000	0.00	0.00	0.00	3.25
4371	4748	2.295909	GTGGCTATGCTTTTTCACCACA	59.704	45.455	0.00	0.00	44.32	4.17
4382	4759	4.402474	GGGAAAATTTACAGTGGCTATGCT	59.598	41.667	0.00	0.00	0.00	3.79
4448	4826	2.821969	AGAGTCATCAACCCATGCAAAC	59.178	45.455	0.00	0.00	0.00	2.93
4472	4850	7.664082	TTTTTGCAATTTGTTTCTCACAAGA	57.336	28.000	0.00	0.00	46.37	3.02
4518	4896	7.665690	TCAGCTGATATCTGAGAAAGGATAAC	58.334	38.462	13.74	0.00	35.81	1.89
4525	4903	8.476064	ACTCTAATCAGCTGATATCTGAGAAA	57.524	34.615	31.76	14.64	43.02	2.52
4528	4906	7.451501	TGACTCTAATCAGCTGATATCTGAG	57.548	40.000	28.92	28.12	43.02	3.35
4608	4986	1.000607	GCTACCGAGAATATCACCGCA	60.001	52.381	0.00	0.00	0.00	5.69
4614	4992	3.570559	GCTGAGTGCTACCGAGAATATC	58.429	50.000	0.00	0.00	38.95	1.63
4623	5001	1.676529	TCATAGTCGCTGAGTGCTACC	59.323	52.381	0.00	0.00	38.01	3.18
4662	5040	3.294750	CGCCTACTGGTGCCACTA	58.705	61.111	0.00	0.00	37.01	2.74
4740	5118	4.916983	TTAGCAAATGCAACTGACAAGT	57.083	36.364	8.28	0.00	45.16	3.16
4795	5173	4.534897	TGAGCTTAGCTAACCCTAACCTTT	59.465	41.667	6.75	0.00	39.88	3.11
4796	5174	4.101856	TGAGCTTAGCTAACCCTAACCTT	58.898	43.478	6.75	0.00	39.88	3.50
4798	5176	4.482952	TTGAGCTTAGCTAACCCTAACC	57.517	45.455	6.75	0.00	39.88	2.85
4799	5177	5.527951	GGAATTGAGCTTAGCTAACCCTAAC	59.472	44.000	6.75	0.00	39.88	2.34
4878	5309	0.034756	CCAGGACGAATGGTGTGTCA	59.965	55.000	0.00	0.00	34.32	3.58
4951	5382	1.139058	GTCACTGAACCACTCACAGGT	59.861	52.381	0.00	0.00	42.34	4.00
4956	5387	2.028876	TCGAAGTCACTGAACCACTCA	58.971	47.619	0.00	0.00	0.00	3.41
4968	5399	3.744719	CGGAGCGGGTCGAAGTCA	61.745	66.667	0.53	0.00	0.00	3.41
5043	5474	2.025418	CGCCGCGTACAGGTTCTTT	61.025	57.895	4.92	0.00	0.00	2.52
5320	5754	1.266718	CTAACACAACAACGGCAGCAT	59.733	47.619	0.00	0.00	0.00	3.79
5717	6188	5.413309	TGGAAGTTTTTCAGGCAAAAGAA	57.587	34.783	0.00	0.00	35.34	2.52
5718	6189	5.413309	TTGGAAGTTTTTCAGGCAAAAGA	57.587	34.783	0.00	0.00	35.34	2.52
5719	6190	6.682423	AATTGGAAGTTTTTCAGGCAAAAG	57.318	33.333	0.00	0.00	35.34	2.27
5720	6191	8.744568	ATAAATTGGAAGTTTTTCAGGCAAAA	57.255	26.923	0.00	0.00	34.90	2.44
5757	6228	7.797038	TTCTAGTGCTCGTTGTACTATCATA	57.203	36.000	8.74	0.00	41.71	2.15
5794	6265	1.040646	TGGTCTACGGATCTGGATGC	58.959	55.000	6.47	0.00	0.00	3.91
5903	6374	5.048364	GCATGACGACTTCCTGACTATCTAT	60.048	44.000	0.00	0.00	0.00	1.98
5908	6379	2.447443	AGCATGACGACTTCCTGACTA	58.553	47.619	0.00	0.00	0.00	2.59
5924	6395	1.413077	GGTTCTACGAGGCCTTAGCAT	59.587	52.381	6.77	0.00	42.56	3.79
6029	6501	2.027285	TGGATTTGCTCGGATCTGTTCA	60.027	45.455	0.42	0.00	0.00	3.18
6054	6526	2.165437	GTGTCTCTGGTGGATCTGTCTC	59.835	54.545	0.00	0.00	0.00	3.36
6129	6606	4.790790	AGAAGATGGAATAAAGGTCACCCT	59.209	41.667	0.00	0.00	45.63	4.34
6133	6610	4.442706	GCGAGAAGATGGAATAAAGGTCA	58.557	43.478	0.00	0.00	0.00	4.02
6179	6673	9.581099	TTTTAGATCTTTTTCGAGCTTTTGTTT	57.419	25.926	0.00	0.00	31.24	2.83
6187	6681	5.923665	TCCGTTTTTAGATCTTTTTCGAGC	58.076	37.500	0.00	0.00	0.00	5.03
6188	6682	6.016111	GCTCCGTTTTTAGATCTTTTTCGAG	58.984	40.000	0.00	0.00	0.00	4.04
6191	6685	5.183331	AGGGCTCCGTTTTTAGATCTTTTTC	59.817	40.000	0.00	0.00	0.00	2.29

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.