Multiple sequence alignment - TraesCS7A01G009600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G009600 chr7A 100.000 5374 0 0 1 5374 4256084 4250711 0.000000e+00 9925
1 TraesCS7A01G009600 chr7A 89.651 1778 142 23 954 2697 29665481 29663712 0.000000e+00 2226
2 TraesCS7A01G009600 chr7A 85.394 1294 151 16 2763 4028 29663277 29661994 0.000000e+00 1308
3 TraesCS7A01G009600 chr7A 82.700 948 157 6 1734 2677 4329867 4328923 0.000000e+00 835
4 TraesCS7A01G009600 chr7A 79.167 696 133 9 3279 3965 4206952 4206260 6.300000e-129 472
5 TraesCS7A01G009600 chr7A 94.545 110 6 0 742 851 29667609 29667500 2.570000e-38 171
6 TraesCS7A01G009600 chr7A 92.000 100 8 0 1330 1429 4070358 4070259 2.020000e-29 141
7 TraesCS7A01G009600 chr7A 90.816 98 9 0 1330 1427 4625654 4625751 1.210000e-26 132
8 TraesCS7A01G009600 chr7D 93.109 1959 92 17 758 2694 4426716 4424779 0.000000e+00 2830
9 TraesCS7A01G009600 chr7D 89.947 1900 140 28 831 2696 29405893 29404011 0.000000e+00 2403
10 TraesCS7A01G009600 chr7D 87.123 1359 135 17 2765 4098 4424756 4423413 0.000000e+00 1504
11 TraesCS7A01G009600 chr7D 85.858 1294 145 17 2763 4028 29403997 29402714 0.000000e+00 1341
12 TraesCS7A01G009600 chr7D 82.505 966 158 8 1734 2694 4503421 4502462 0.000000e+00 837
13 TraesCS7A01G009600 chr7D 80.285 771 134 15 3276 4035 4502166 4501403 2.810000e-157 566
14 TraesCS7A01G009600 chr7D 79.286 700 129 13 3279 3967 4412869 4412175 4.870000e-130 475
15 TraesCS7A01G009600 chr7D 77.829 654 128 15 3282 3922 4289587 4288938 6.530000e-104 388
16 TraesCS7A01G009600 chr7D 93.636 110 7 0 742 851 29406017 29405908 1.200000e-36 165
17 TraesCS7A01G009600 chr7D 89.796 98 10 0 1330 1427 4793115 4793212 5.650000e-25 126
18 TraesCS7A01G009600 chr4A 91.033 1985 115 24 742 2696 739129016 739130967 0.000000e+00 2621
19 TraesCS7A01G009600 chr4A 86.373 1387 150 21 2738 4098 739130975 739132348 0.000000e+00 1478
20 TraesCS7A01G009600 chr4A 84.783 1012 106 21 4384 5372 739132638 739133624 0.000000e+00 972
21 TraesCS7A01G009600 chr4A 84.475 934 141 2 1747 2677 739079323 739080255 0.000000e+00 918
22 TraesCS7A01G009600 chr4A 80.234 941 177 8 1747 2680 739273622 739274560 0.000000e+00 699
23 TraesCS7A01G009600 chr4A 79.831 947 182 7 1751 2692 739152648 739153590 0.000000e+00 682
24 TraesCS7A01G009600 chr4A 85.318 613 69 13 7 616 739127863 739128457 9.890000e-172 614
25 TraesCS7A01G009600 chr4A 77.376 663 127 21 3276 3922 739275475 739276130 6.570000e-99 372
26 TraesCS7A01G009600 chr4A 95.122 82 4 0 1346 1427 739310613 739310694 4.370000e-26 130
27 TraesCS7A01G009600 chr4A 88.776 98 11 0 1330 1427 738890283 738890186 2.630000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G009600 chr7A 4250711 4256084 5373 True 9925.00 9925 100.000000 1 5374 1 chr7A.!!$R3 5373
1 TraesCS7A01G009600 chr7A 29661994 29667609 5615 True 1235.00 2226 89.863333 742 4028 3 chr7A.!!$R5 3286
2 TraesCS7A01G009600 chr7A 4328923 4329867 944 True 835.00 835 82.700000 1734 2677 1 chr7A.!!$R4 943
3 TraesCS7A01G009600 chr7A 4206260 4206952 692 True 472.00 472 79.167000 3279 3965 1 chr7A.!!$R2 686
4 TraesCS7A01G009600 chr7D 4423413 4426716 3303 True 2167.00 2830 90.116000 758 4098 2 chr7D.!!$R3 3340
5 TraesCS7A01G009600 chr7D 29402714 29406017 3303 True 1303.00 2403 89.813667 742 4028 3 chr7D.!!$R5 3286
6 TraesCS7A01G009600 chr7D 4501403 4503421 2018 True 701.50 837 81.395000 1734 4035 2 chr7D.!!$R4 2301
7 TraesCS7A01G009600 chr7D 4412175 4412869 694 True 475.00 475 79.286000 3279 3967 1 chr7D.!!$R2 688
8 TraesCS7A01G009600 chr7D 4288938 4289587 649 True 388.00 388 77.829000 3282 3922 1 chr7D.!!$R1 640
9 TraesCS7A01G009600 chr4A 739127863 739133624 5761 False 1421.25 2621 86.876750 7 5372 4 chr4A.!!$F4 5365
10 TraesCS7A01G009600 chr4A 739079323 739080255 932 False 918.00 918 84.475000 1747 2677 1 chr4A.!!$F1 930
11 TraesCS7A01G009600 chr4A 739152648 739153590 942 False 682.00 682 79.831000 1751 2692 1 chr4A.!!$F2 941
12 TraesCS7A01G009600 chr4A 739273622 739276130 2508 False 535.50 699 78.805000 1747 3922 2 chr4A.!!$F5 2175

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
723 1186 0.180406 AAAGCACTCGTTGTCCTGGT 59.820 50.0 0.00 0.00 0.0 4.00 F
725 1188 0.180406 AGCACTCGTTGTCCTGGTTT 59.820 50.0 0.00 0.00 0.0 3.27 F
726 1189 0.307760 GCACTCGTTGTCCTGGTTTG 59.692 55.0 0.00 0.00 0.0 2.93 F
1957 4405 0.391927 CCGTACTTCCCGATGGCAAA 60.392 55.0 0.00 0.00 0.0 3.68 F
3427 6998 0.467384 CGTCATCCCCTTGCATCTCT 59.533 55.0 0.00 0.00 0.0 3.10 F
3941 7521 0.110688 CACTCAACACCGATGCAACG 60.111 55.0 9.71 9.71 0.0 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2578 5032 1.002134 CTGGACGTTTGCCCATCCT 60.002 57.895 0.00 0.00 32.06 3.24 R
2616 5072 7.917720 AAACACGTGGTAAAACATATCAAAC 57.082 32.000 21.57 0.00 0.00 2.93 R
2732 5191 6.867799 TGCAAGTTAACAATCGCATAAATG 57.132 33.333 8.61 0.00 0.00 2.32 R
3887 7467 0.248702 GAGCCTCTCGACGGTCATTC 60.249 60.000 9.10 0.00 0.00 2.67 R
4287 7876 0.045008 TATACAGGTGAAGGGCCCCA 59.955 55.000 21.43 7.57 0.00 4.96 R
4934 8575 0.232303 GGTGTTCGAACTTGACAGCG 59.768 55.000 27.32 0.00 0.00 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.305046 GGGTCTTCTGGTCCTCGGA 60.305 63.158 0.00 0.00 0.00 4.55
34 35 2.233922 GTCTTCTGGTCCTCGGAATCAA 59.766 50.000 0.00 0.00 39.77 2.57
39 40 3.519510 TCTGGTCCTCGGAATCAAATTCT 59.480 43.478 0.18 0.00 39.24 2.40
43 44 5.130311 TGGTCCTCGGAATCAAATTCTATCA 59.870 40.000 0.18 0.00 39.24 2.15
55 56 5.530171 TCAAATTCTATCAGCTTCAGATGCC 59.470 40.000 4.67 0.00 0.00 4.40
56 57 4.978438 ATTCTATCAGCTTCAGATGCCT 57.022 40.909 4.67 0.00 0.00 4.75
74 75 7.200778 GATGCCTCATCTTTCTTTATTCTCC 57.799 40.000 0.00 0.00 37.82 3.71
76 77 6.352516 TGCCTCATCTTTCTTTATTCTCCTC 58.647 40.000 0.00 0.00 0.00 3.71
78 79 5.988561 CCTCATCTTTCTTTATTCTCCTCCG 59.011 44.000 0.00 0.00 0.00 4.63
79 80 6.183360 CCTCATCTTTCTTTATTCTCCTCCGA 60.183 42.308 0.00 0.00 0.00 4.55
80 81 6.810911 TCATCTTTCTTTATTCTCCTCCGAG 58.189 40.000 0.00 0.00 37.48 4.63
95 96 1.050988 CCGAGGAGGATGTCATGGGT 61.051 60.000 0.00 0.00 45.00 4.51
100 101 0.749454 GAGGATGTCATGGGTGTGGC 60.749 60.000 0.00 0.00 0.00 5.01
109 110 4.603535 GGGTGTGGCCTTGGTGCT 62.604 66.667 3.32 0.00 37.43 4.40
110 111 2.521708 GGTGTGGCCTTGGTGCTT 60.522 61.111 3.32 0.00 0.00 3.91
112 113 2.521465 TGTGGCCTTGGTGCTTGG 60.521 61.111 3.32 0.00 0.00 3.61
115 116 3.376918 GGCCTTGGTGCTTGGAGC 61.377 66.667 0.00 0.00 42.82 4.70
131 132 2.438254 GCACATGGGGCACATCGA 60.438 61.111 0.00 0.00 37.84 3.59
137 138 1.050988 ATGGGGCACATCGAGCTAGT 61.051 55.000 0.00 0.00 33.53 2.57
138 139 1.264749 TGGGGCACATCGAGCTAGTT 61.265 55.000 0.00 0.00 0.00 2.24
146 147 2.362717 ACATCGAGCTAGTTAAGAGCCC 59.637 50.000 5.81 0.00 41.06 5.19
147 148 1.022735 TCGAGCTAGTTAAGAGCCCG 58.977 55.000 6.82 6.82 41.93 6.13
148 149 1.022735 CGAGCTAGTTAAGAGCCCGA 58.977 55.000 7.25 0.00 43.07 5.14
149 150 1.002251 CGAGCTAGTTAAGAGCCCGAG 60.002 57.143 7.25 0.00 43.07 4.63
152 153 1.803252 GCTAGTTAAGAGCCCGAGTGC 60.803 57.143 0.00 0.00 33.60 4.40
156 157 2.166664 AGTTAAGAGCCCGAGTGCTAAG 59.833 50.000 0.00 0.00 42.95 2.18
172 173 3.204158 TGCTAAGCTTTCCATATTCCCCA 59.796 43.478 3.20 0.00 0.00 4.96
184 185 1.084018 ATTCCCCATGTTGACCTGGT 58.916 50.000 0.00 0.00 30.79 4.00
190 191 1.283029 CCATGTTGACCTGGTGAGGAT 59.717 52.381 2.82 0.00 42.93 3.24
198 199 2.103941 GACCTGGTGAGGATCCATCTTC 59.896 54.545 15.82 2.85 42.93 2.87
237 238 1.221414 GTGCGAGGATCCATAAGTGC 58.779 55.000 15.82 8.57 0.00 4.40
241 242 1.688735 CGAGGATCCATAAGTGCCTCA 59.311 52.381 15.82 0.00 44.14 3.86
250 251 3.066342 CCATAAGTGCCTCAAATGCTCTG 59.934 47.826 0.00 0.00 33.25 3.35
256 257 2.224744 TGCCTCAAATGCTCTGTAACCA 60.225 45.455 0.00 0.00 0.00 3.67
292 293 1.926489 GGGTATGGTGTGGACCCCA 60.926 63.158 0.00 0.00 46.24 4.96
301 302 4.752457 TGGACCCCACTTACCACA 57.248 55.556 0.00 0.00 0.00 4.17
316 317 7.446013 CCACTTACCACAAGGAATGTAAAGTTA 59.554 37.037 0.00 0.00 41.46 2.24
328 329 9.860898 AGGAATGTAAAGTTATTTTTGCAGATC 57.139 29.630 0.00 0.00 36.38 2.75
342 343 1.465354 GCAGATCAACTTGCAGCTTCG 60.465 52.381 0.00 0.00 0.00 3.79
344 345 2.093941 CAGATCAACTTGCAGCTTCGAG 59.906 50.000 0.00 0.00 0.00 4.04
346 347 0.532640 TCAACTTGCAGCTTCGAGCA 60.533 50.000 0.00 0.00 45.56 4.26
351 352 1.800586 CTTGCAGCTTCGAGCAGTAAA 59.199 47.619 9.09 1.56 45.56 2.01
368 369 7.770201 AGCAGTAAATTTTGGTTTTGCAAAAT 58.230 26.923 26.24 11.18 41.18 1.82
375 376 9.486497 AAATTTTGGTTTTGCAAAATGTCTTTT 57.514 22.222 26.24 17.67 39.87 2.27
383 384 3.883631 CAAAATGTCTTTTGGGCAAGC 57.116 42.857 3.46 0.00 44.88 4.01
385 386 3.843893 AAATGTCTTTTGGGCAAGCTT 57.156 38.095 0.00 0.00 0.00 3.74
386 387 2.825861 ATGTCTTTTGGGCAAGCTTG 57.174 45.000 22.44 22.44 0.00 4.01
387 388 1.774110 TGTCTTTTGGGCAAGCTTGA 58.226 45.000 30.39 6.42 0.00 3.02
388 389 1.682854 TGTCTTTTGGGCAAGCTTGAG 59.317 47.619 30.39 16.51 0.00 3.02
389 390 0.675633 TCTTTTGGGCAAGCTTGAGC 59.324 50.000 30.39 15.42 42.49 4.26
396 397 3.181526 GCAAGCTTGAGCCTATGGT 57.818 52.632 30.39 0.00 43.38 3.55
397 398 1.467920 GCAAGCTTGAGCCTATGGTT 58.532 50.000 30.39 0.00 43.38 3.67
398 399 1.403323 GCAAGCTTGAGCCTATGGTTC 59.597 52.381 30.39 3.58 43.38 3.62
399 400 2.943199 GCAAGCTTGAGCCTATGGTTCT 60.943 50.000 30.39 0.00 43.38 3.01
400 401 3.350833 CAAGCTTGAGCCTATGGTTCTT 58.649 45.455 22.31 0.00 43.38 2.52
401 402 4.517285 CAAGCTTGAGCCTATGGTTCTTA 58.483 43.478 22.31 0.00 43.38 2.10
424 425 2.507484 ACTGTGTGATGACCATGTTGG 58.493 47.619 0.00 0.00 45.02 3.77
439 440 4.022329 CCATGTTGGGGTAACTTTTGACTC 60.022 45.833 0.00 0.00 40.05 3.36
466 467 8.564509 TTGCCATTTATCATATCATCATCGAA 57.435 30.769 0.00 0.00 0.00 3.71
474 475 6.364568 TCATATCATCATCGAACCCTTCAT 57.635 37.500 0.00 0.00 0.00 2.57
477 478 9.200817 TCATATCATCATCGAACCCTTCATATA 57.799 33.333 0.00 0.00 0.00 0.86
478 479 9.993454 CATATCATCATCGAACCCTTCATATAT 57.007 33.333 0.00 0.00 0.00 0.86
568 570 2.831597 TGCAGACTGAAGATGCACG 58.168 52.632 6.65 0.00 44.56 5.34
583 585 2.212652 TGCACGCATCATCCTCATAAC 58.787 47.619 0.00 0.00 0.00 1.89
585 587 2.222678 GCACGCATCATCCTCATAACTG 59.777 50.000 0.00 0.00 0.00 3.16
592 594 6.238566 CGCATCATCCTCATAACTGAATTTGT 60.239 38.462 0.00 0.00 0.00 2.83
595 597 5.945191 TCATCCTCATAACTGAATTTGTGCA 59.055 36.000 0.00 0.00 0.00 4.57
596 598 6.604396 TCATCCTCATAACTGAATTTGTGCAT 59.396 34.615 0.00 0.00 0.00 3.96
598 600 7.936496 TCCTCATAACTGAATTTGTGCATAA 57.064 32.000 0.00 0.00 0.00 1.90
599 601 7.988737 TCCTCATAACTGAATTTGTGCATAAG 58.011 34.615 0.00 0.00 0.00 1.73
600 602 7.611467 TCCTCATAACTGAATTTGTGCATAAGT 59.389 33.333 0.00 0.00 0.00 2.24
623 1068 6.939730 AGTGTATATGAACAATGTGACCACAA 59.060 34.615 6.95 0.00 45.41 3.33
625 1070 3.624326 ATGAACAATGTGACCACAACG 57.376 42.857 6.95 4.10 45.41 4.10
648 1093 5.107065 CGCGTCATGACATGTCTAGTCTATA 60.107 44.000 25.55 4.07 36.94 1.31
674 1119 3.082698 TGCAATGCATTTTATCCTCGC 57.917 42.857 9.83 8.15 31.71 5.03
675 1120 2.689471 TGCAATGCATTTTATCCTCGCT 59.311 40.909 9.83 0.00 31.71 4.93
677 1122 4.520111 TGCAATGCATTTTATCCTCGCTAT 59.480 37.500 9.83 0.00 31.71 2.97
678 1123 5.091431 GCAATGCATTTTATCCTCGCTATC 58.909 41.667 9.83 0.00 0.00 2.08
680 1125 6.569226 GCAATGCATTTTATCCTCGCTATCTT 60.569 38.462 9.83 0.00 0.00 2.40
717 1180 3.330275 GCCGAAAGCACTCGTTGT 58.670 55.556 6.70 0.00 42.97 3.32
718 1181 1.204312 GCCGAAAGCACTCGTTGTC 59.796 57.895 6.70 0.00 42.97 3.18
719 1182 1.860078 CCGAAAGCACTCGTTGTCC 59.140 57.895 6.70 0.00 37.11 4.02
720 1183 0.600255 CCGAAAGCACTCGTTGTCCT 60.600 55.000 6.70 0.00 37.11 3.85
721 1184 0.508641 CGAAAGCACTCGTTGTCCTG 59.491 55.000 0.00 0.00 34.08 3.86
722 1185 0.868406 GAAAGCACTCGTTGTCCTGG 59.132 55.000 0.00 0.00 0.00 4.45
723 1186 0.180406 AAAGCACTCGTTGTCCTGGT 59.820 50.000 0.00 0.00 0.00 4.00
724 1187 0.180406 AAGCACTCGTTGTCCTGGTT 59.820 50.000 0.00 0.00 0.00 3.67
725 1188 0.180406 AGCACTCGTTGTCCTGGTTT 59.820 50.000 0.00 0.00 0.00 3.27
726 1189 0.307760 GCACTCGTTGTCCTGGTTTG 59.692 55.000 0.00 0.00 0.00 2.93
727 1190 1.663695 CACTCGTTGTCCTGGTTTGT 58.336 50.000 0.00 0.00 0.00 2.83
728 1191 2.014128 CACTCGTTGTCCTGGTTTGTT 58.986 47.619 0.00 0.00 0.00 2.83
729 1192 2.422127 CACTCGTTGTCCTGGTTTGTTT 59.578 45.455 0.00 0.00 0.00 2.83
730 1193 2.681344 ACTCGTTGTCCTGGTTTGTTTC 59.319 45.455 0.00 0.00 0.00 2.78
731 1194 2.943033 CTCGTTGTCCTGGTTTGTTTCT 59.057 45.455 0.00 0.00 0.00 2.52
732 1195 2.680841 TCGTTGTCCTGGTTTGTTTCTG 59.319 45.455 0.00 0.00 0.00 3.02
733 1196 2.680841 CGTTGTCCTGGTTTGTTTCTGA 59.319 45.455 0.00 0.00 0.00 3.27
734 1197 3.486875 CGTTGTCCTGGTTTGTTTCTGAC 60.487 47.826 0.00 0.00 0.00 3.51
735 1198 3.644966 TGTCCTGGTTTGTTTCTGACT 57.355 42.857 0.00 0.00 0.00 3.41
736 1199 3.963129 TGTCCTGGTTTGTTTCTGACTT 58.037 40.909 0.00 0.00 0.00 3.01
737 1200 3.945285 TGTCCTGGTTTGTTTCTGACTTC 59.055 43.478 0.00 0.00 0.00 3.01
738 1201 3.315470 GTCCTGGTTTGTTTCTGACTTCC 59.685 47.826 0.00 0.00 0.00 3.46
739 1202 3.053991 TCCTGGTTTGTTTCTGACTTCCA 60.054 43.478 0.00 0.00 0.00 3.53
740 1203 3.699038 CCTGGTTTGTTTCTGACTTCCAA 59.301 43.478 0.00 0.00 0.00 3.53
741 1204 4.342092 CCTGGTTTGTTTCTGACTTCCAAT 59.658 41.667 0.00 0.00 0.00 3.16
742 1205 5.534654 CCTGGTTTGTTTCTGACTTCCAATA 59.465 40.000 0.00 0.00 0.00 1.90
743 1206 6.209391 CCTGGTTTGTTTCTGACTTCCAATAT 59.791 38.462 0.00 0.00 0.00 1.28
744 1207 7.393234 CCTGGTTTGTTTCTGACTTCCAATATA 59.607 37.037 0.00 0.00 0.00 0.86
785 1248 7.505585 TCTCCTCAACTGTATTTTGTTTGGATT 59.494 33.333 0.00 0.00 31.06 3.01
791 1254 9.743057 CAACTGTATTTTGTTTGGATTTGTCTA 57.257 29.630 0.00 0.00 0.00 2.59
871 1369 6.559810 TGTTGTATGCATGTGCCTAAATTAC 58.440 36.000 10.16 0.00 41.18 1.89
872 1370 5.416862 TGTATGCATGTGCCTAAATTACG 57.583 39.130 10.16 0.00 41.18 3.18
930 1430 4.137543 AGATGGGTCTAAATTCATTCGCC 58.862 43.478 0.00 0.00 31.36 5.54
934 1436 4.157656 TGGGTCTAAATTCATTCGCCAAAG 59.842 41.667 0.00 0.00 0.00 2.77
938 3328 6.866248 GGTCTAAATTCATTCGCCAAAGAAAA 59.134 34.615 0.00 0.00 33.43 2.29
940 3330 7.807907 GTCTAAATTCATTCGCCAAAGAAAAGA 59.192 33.333 0.00 0.00 33.43 2.52
941 3331 8.522830 TCTAAATTCATTCGCCAAAGAAAAGAT 58.477 29.630 0.00 0.00 33.43 2.40
944 3334 5.818136 TCATTCGCCAAAGAAAAGATAGG 57.182 39.130 0.00 0.00 33.43 2.57
945 3335 5.253330 TCATTCGCCAAAGAAAAGATAGGT 58.747 37.500 0.00 0.00 33.43 3.08
946 3336 5.354234 TCATTCGCCAAAGAAAAGATAGGTC 59.646 40.000 0.00 0.00 33.43 3.85
947 3337 4.553330 TCGCCAAAGAAAAGATAGGTCT 57.447 40.909 0.00 0.00 35.82 3.85
948 3338 5.670792 TCGCCAAAGAAAAGATAGGTCTA 57.329 39.130 0.00 0.00 33.30 2.59
949 3339 6.045072 TCGCCAAAGAAAAGATAGGTCTAA 57.955 37.500 0.00 0.00 33.30 2.10
950 3340 6.469410 TCGCCAAAGAAAAGATAGGTCTAAA 58.531 36.000 0.00 0.00 33.30 1.85
952 3342 7.610305 TCGCCAAAGAAAAGATAGGTCTAAATT 59.390 33.333 0.00 0.00 33.30 1.82
1014 3415 4.991056 CAGCTATAAATGGCGCTCTCTAAA 59.009 41.667 7.64 0.00 39.47 1.85
1022 3423 2.003301 GGCGCTCTCTAAAACTCAAGG 58.997 52.381 7.64 0.00 0.00 3.61
1034 3439 1.296715 CTCAAGGAAGACCCCGGTG 59.703 63.158 0.00 0.00 36.73 4.94
1082 3487 2.267961 GGCCGTCGGGATGAAGTT 59.732 61.111 14.38 0.00 34.06 2.66
1165 3570 3.601685 TGAGGTGTCGCGAGTGCA 61.602 61.111 10.24 0.00 42.97 4.57
1335 3746 1.227468 GGTAGGGGAAATCGGCGAC 60.227 63.158 13.76 0.00 0.00 5.19
1352 3763 3.470888 CGAGGCCGATGGGTTCCT 61.471 66.667 0.00 0.00 38.22 3.36
1489 3907 3.240302 CTCCTATATGTTCTTCCCCGGT 58.760 50.000 0.00 0.00 0.00 5.28
1515 3945 4.425520 GACGACTATGTTTGGAGGAAGAG 58.574 47.826 0.00 0.00 0.00 2.85
1614 4044 2.879462 CTTACGTGCTCCGGCGAC 60.879 66.667 9.30 0.00 42.24 5.19
1615 4045 3.620300 CTTACGTGCTCCGGCGACA 62.620 63.158 9.30 0.00 42.24 4.35
1616 4046 2.884087 CTTACGTGCTCCGGCGACAT 62.884 60.000 9.30 0.00 42.24 3.06
1617 4047 3.693382 TACGTGCTCCGGCGACATG 62.693 63.158 9.30 11.69 42.24 3.21
1666 4100 5.188163 TCCAAACGGTGAGTAGGATCATTAA 59.812 40.000 0.00 0.00 33.79 1.40
1698 4132 1.509004 GACCAGCTGTCGTCTCTCC 59.491 63.158 13.81 0.00 33.49 3.71
1700 4134 2.202544 CAGCTGTCGTCTCTCCGC 60.203 66.667 5.25 0.00 0.00 5.54
1715 4156 2.965147 TCTCCGCATGTCTATCCATTGA 59.035 45.455 0.00 0.00 0.00 2.57
1957 4405 0.391927 CCGTACTTCCCGATGGCAAA 60.392 55.000 0.00 0.00 0.00 3.68
2113 4561 1.954382 GAGACCGGCAAAAAGGACTTT 59.046 47.619 0.00 0.00 33.01 2.66
2251 4699 1.066858 GTCAAGTTCGAGCTCATCCCA 60.067 52.381 15.40 0.00 0.00 4.37
2441 4895 4.697756 CGCCGCTGGACCCAGAAA 62.698 66.667 19.55 0.00 46.30 2.52
2578 5032 4.367023 CGGACCGACCTCGCCAAA 62.367 66.667 8.64 0.00 38.18 3.28
2616 5072 7.148641 GTCCAGGTATCTGTATTGTACATCAG 58.851 42.308 1.52 13.49 39.31 2.90
2759 5587 8.972262 TTTATGCGATTGTTAACTTGCATTTA 57.028 26.923 21.31 11.55 42.49 1.40
2806 5634 6.997476 TGCATGCTTGATACATAAATAGTCCA 59.003 34.615 20.33 0.00 0.00 4.02
2826 5654 8.343168 AGTCCATCCGTTCATTATTACAAAAA 57.657 30.769 0.00 0.00 0.00 1.94
2827 5655 8.966868 AGTCCATCCGTTCATTATTACAAAAAT 58.033 29.630 0.00 0.00 0.00 1.82
2828 5656 9.019764 GTCCATCCGTTCATTATTACAAAAATG 57.980 33.333 0.00 0.00 34.96 2.32
2830 5658 9.364989 CCATCCGTTCATTATTACAAAAATGTT 57.635 29.630 0.00 0.00 35.16 2.71
2867 5697 7.090808 TCTGATTTGGATGTATATAGACACGC 58.909 38.462 1.52 0.00 30.52 5.34
2897 5727 8.654997 AGTATGTATATTCACTCATTTCAGCCT 58.345 33.333 0.00 0.00 0.00 4.58
2901 5731 9.929180 TGTATATTCACTCATTTCAGCCTATAC 57.071 33.333 0.00 0.00 0.00 1.47
2907 5737 5.915758 CACTCATTTCAGCCTATACGTAGTC 59.084 44.000 0.08 0.00 43.93 2.59
2909 5739 3.976793 TTTCAGCCTATACGTAGTCCG 57.023 47.619 0.08 0.00 43.93 4.79
2949 5779 6.525578 ACATCTTATAACAGTGAACGGAGA 57.474 37.500 0.00 0.00 0.00 3.71
2956 5786 9.199982 CTTATAACAGTGAACGGAGAAAGTAAA 57.800 33.333 0.00 0.00 0.00 2.01
2965 5795 8.221766 GTGAACGGAGAAAGTAAATCTTTGTAG 58.778 37.037 0.00 0.00 45.15 2.74
3037 5868 7.283580 TCACTATTAACTAGGCTCTCTGAGAAC 59.716 40.741 8.95 4.08 0.00 3.01
3038 5869 4.966965 TTAACTAGGCTCTCTGAGAACG 57.033 45.455 8.95 0.00 0.00 3.95
3047 5878 3.679725 CTCTCTGAGAACGTCGAATCTG 58.320 50.000 8.95 0.00 0.00 2.90
3049 5880 3.942115 TCTCTGAGAACGTCGAATCTGAT 59.058 43.478 4.57 0.00 0.00 2.90
3084 5915 6.808829 TCAAATTAGGCATTTCCATCATGTC 58.191 36.000 0.00 0.00 32.24 3.06
3109 5940 3.243434 TGCTATAAGCCAGCTCGTACTTC 60.243 47.826 0.00 0.00 41.51 3.01
3143 5974 6.775594 AGAGAACCATTTATTAAGTTGCCC 57.224 37.500 0.00 0.00 0.00 5.36
3152 5983 2.489938 TTAAGTTGCCCGCTGAATCT 57.510 45.000 0.00 0.00 0.00 2.40
3173 6004 1.817357 TGAGCAGGCAAGAGACAATG 58.183 50.000 0.00 0.00 0.00 2.82
3212 6764 8.931568 AGTTAGAAGAAAAGGTAGTGGTTCTTA 58.068 33.333 0.00 0.00 39.73 2.10
3261 6826 4.572795 GGACTTGCCTAGCTTGAATCTAAC 59.427 45.833 0.00 0.00 0.00 2.34
3328 6899 2.539263 GAAGACCCGGACGAACCTCG 62.539 65.000 0.73 0.00 46.93 4.63
3418 6989 2.765807 CTGGCTCCGTCATCCCCT 60.766 66.667 0.00 0.00 0.00 4.79
3427 6998 0.467384 CGTCATCCCCTTGCATCTCT 59.533 55.000 0.00 0.00 0.00 3.10
3474 7045 1.371183 CTCCTTCCGCCTCAACACA 59.629 57.895 0.00 0.00 0.00 3.72
3588 7168 4.003788 CTCCTCACCAACGGCCGT 62.004 66.667 28.70 28.70 0.00 5.68
3594 7174 1.736645 CACCAACGGCCGTAGTGAG 60.737 63.158 38.77 26.31 35.69 3.51
3624 7204 5.163683 GGCAATGTACTTCTACGTGTCTAGA 60.164 44.000 0.00 0.00 0.00 2.43
3732 7312 1.734477 CACTGTTCCGGTGCTCGAG 60.734 63.158 8.45 8.45 42.43 4.04
3825 7405 1.446618 GGCGACGTCACGGGTTTAT 60.447 57.895 17.16 0.00 0.00 1.40
3880 7460 4.575236 TGTATGTTTTCAACAACGCTACCA 59.425 37.500 0.00 0.00 45.86 3.25
3887 7467 0.320771 AACAACGCTACCAGCTCCAG 60.321 55.000 0.00 0.00 39.60 3.86
3891 7471 0.176680 ACGCTACCAGCTCCAGAATG 59.823 55.000 0.00 0.00 39.60 2.67
3902 7482 1.064803 CTCCAGAATGACCGTCGAGAG 59.935 57.143 0.00 0.00 39.69 3.20
3941 7521 0.110688 CACTCAACACCGATGCAACG 60.111 55.000 9.71 9.71 0.00 4.10
3985 7565 6.718522 AATTTCCAACGGGTTTCTCTTTTA 57.281 33.333 0.00 0.00 34.93 1.52
3992 7572 7.040961 TCCAACGGGTTTCTCTTTTATAAGTTG 60.041 37.037 0.00 0.00 35.32 3.16
3996 7576 6.349033 CGGGTTTCTCTTTTATAAGTTGGGTG 60.349 42.308 0.00 0.00 32.98 4.61
4009 7593 5.930837 AAGTTGGGTGTCTGAATTTTTCA 57.069 34.783 0.00 0.00 38.17 2.69
4038 7622 6.007485 TGTCAGATGGATCTAGTCAGTAGT 57.993 41.667 0.00 0.00 34.85 2.73
4040 7624 7.750655 TGTCAGATGGATCTAGTCAGTAGTAT 58.249 38.462 0.00 0.00 34.85 2.12
4042 7626 9.158233 GTCAGATGGATCTAGTCAGTAGTATAC 57.842 40.741 0.00 0.00 37.31 1.47
4078 7662 7.582435 AAAATATCACAGACTGTTACTGTCG 57.418 36.000 5.04 12.47 45.15 4.35
4098 7682 1.672881 GGCTCGTTTATGCAGCAGATT 59.327 47.619 0.00 0.00 34.62 2.40
4099 7683 2.540361 GGCTCGTTTATGCAGCAGATTG 60.540 50.000 0.00 0.00 34.62 2.67
4101 7685 3.786818 GCTCGTTTATGCAGCAGATTGTC 60.787 47.826 0.00 0.00 33.06 3.18
4102 7686 3.599343 TCGTTTATGCAGCAGATTGTCT 58.401 40.909 0.00 0.00 0.00 3.41
4103 7687 4.754322 TCGTTTATGCAGCAGATTGTCTA 58.246 39.130 0.00 0.00 0.00 2.59
4104 7688 4.805719 TCGTTTATGCAGCAGATTGTCTAG 59.194 41.667 0.00 0.00 0.00 2.43
4106 7690 5.501413 CGTTTATGCAGCAGATTGTCTAGTG 60.501 44.000 0.00 0.00 0.00 2.74
4107 7691 2.391616 TGCAGCAGATTGTCTAGTGG 57.608 50.000 0.00 0.00 0.00 4.00
4108 7692 1.065926 TGCAGCAGATTGTCTAGTGGG 60.066 52.381 0.00 0.00 0.00 4.61
4109 7693 1.065854 GCAGCAGATTGTCTAGTGGGT 60.066 52.381 0.00 0.00 0.00 4.51
4110 7694 2.625737 CAGCAGATTGTCTAGTGGGTG 58.374 52.381 0.00 0.00 0.00 4.61
4111 7695 1.556911 AGCAGATTGTCTAGTGGGTGG 59.443 52.381 0.00 0.00 0.00 4.61
4112 7696 1.555075 GCAGATTGTCTAGTGGGTGGA 59.445 52.381 0.00 0.00 0.00 4.02
4113 7697 2.678190 GCAGATTGTCTAGTGGGTGGAC 60.678 54.545 0.00 0.00 37.18 4.02
4114 7698 2.567169 CAGATTGTCTAGTGGGTGGACA 59.433 50.000 0.00 0.00 44.41 4.02
4115 7699 2.834549 AGATTGTCTAGTGGGTGGACAG 59.165 50.000 0.00 0.00 46.37 3.51
4116 7700 1.348064 TTGTCTAGTGGGTGGACAGG 58.652 55.000 0.00 0.00 46.37 4.00
4117 7701 0.190069 TGTCTAGTGGGTGGACAGGT 59.810 55.000 0.00 0.00 41.46 4.00
4118 7702 0.608640 GTCTAGTGGGTGGACAGGTG 59.391 60.000 0.00 0.00 36.66 4.00
4119 7703 0.544357 TCTAGTGGGTGGACAGGTGG 60.544 60.000 0.00 0.00 0.00 4.61
4120 7704 1.537889 TAGTGGGTGGACAGGTGGG 60.538 63.158 0.00 0.00 0.00 4.61
4121 7705 2.335134 TAGTGGGTGGACAGGTGGGT 62.335 60.000 0.00 0.00 0.00 4.51
4122 7706 3.174987 TGGGTGGACAGGTGGGTG 61.175 66.667 0.00 0.00 0.00 4.61
4123 7707 3.966543 GGGTGGACAGGTGGGTGG 61.967 72.222 0.00 0.00 0.00 4.61
4124 7708 3.175710 GGTGGACAGGTGGGTGGT 61.176 66.667 0.00 0.00 0.00 4.16
4125 7709 2.430367 GTGGACAGGTGGGTGGTC 59.570 66.667 0.00 0.00 0.00 4.02
4134 7718 3.694985 TGGGTGGTCCATTGGGTT 58.305 55.556 2.09 0.00 41.46 4.11
4139 7723 1.006639 GGTGGTCCATTGGGTTGGTAT 59.993 52.381 2.09 0.00 38.01 2.73
4140 7724 2.558800 GGTGGTCCATTGGGTTGGTATT 60.559 50.000 2.09 0.00 38.01 1.89
4142 7726 3.951680 GTGGTCCATTGGGTTGGTATTAG 59.048 47.826 2.09 0.00 38.01 1.73
4150 7734 1.474498 GGGTTGGTATTAGGCTGGACG 60.474 57.143 0.00 0.00 0.00 4.79
4154 7738 2.313317 TGGTATTAGGCTGGACGGTAG 58.687 52.381 0.00 0.00 0.00 3.18
4156 7740 2.557490 GGTATTAGGCTGGACGGTAGAG 59.443 54.545 0.00 0.00 0.00 2.43
4159 7743 0.183014 TAGGCTGGACGGTAGAGGAG 59.817 60.000 0.00 0.00 0.00 3.69
4169 7753 2.108168 CGGTAGAGGAGTCCATTTCCA 58.892 52.381 12.86 0.00 37.18 3.53
4171 7755 3.243907 CGGTAGAGGAGTCCATTTCCATC 60.244 52.174 12.86 0.00 37.18 3.51
4176 7760 1.766496 GGAGTCCATTTCCATCGGGTA 59.234 52.381 3.60 0.00 34.74 3.69
4187 7771 2.983791 TCGGGTAAGGCCGGAAAG 59.016 61.111 5.05 0.00 42.63 2.62
4188 7772 1.914764 TCGGGTAAGGCCGGAAAGT 60.915 57.895 5.05 0.00 42.63 2.66
4189 7773 0.614415 TCGGGTAAGGCCGGAAAGTA 60.614 55.000 5.05 0.00 42.63 2.24
4190 7774 0.466963 CGGGTAAGGCCGGAAAGTAT 59.533 55.000 5.05 0.00 39.69 2.12
4191 7775 1.688197 CGGGTAAGGCCGGAAAGTATA 59.312 52.381 5.05 0.00 39.69 1.47
4192 7776 2.546584 CGGGTAAGGCCGGAAAGTATAC 60.547 54.545 5.05 0.00 39.69 1.47
4193 7777 2.435437 GGGTAAGGCCGGAAAGTATACA 59.565 50.000 5.05 0.00 38.44 2.29
4194 7778 3.493873 GGGTAAGGCCGGAAAGTATACAG 60.494 52.174 5.05 0.00 38.44 2.74
4195 7779 3.385755 GGTAAGGCCGGAAAGTATACAGA 59.614 47.826 5.05 0.00 0.00 3.41
4196 7780 3.821421 AAGGCCGGAAAGTATACAGAG 57.179 47.619 5.05 0.00 0.00 3.35
4197 7781 1.413077 AGGCCGGAAAGTATACAGAGC 59.587 52.381 5.05 0.00 0.00 4.09
4198 7782 1.138266 GGCCGGAAAGTATACAGAGCA 59.862 52.381 5.05 0.00 0.00 4.26
4199 7783 2.474816 GCCGGAAAGTATACAGAGCAG 58.525 52.381 5.05 0.00 0.00 4.24
4200 7784 2.100916 GCCGGAAAGTATACAGAGCAGA 59.899 50.000 5.05 0.00 0.00 4.26
4201 7785 3.430374 GCCGGAAAGTATACAGAGCAGAA 60.430 47.826 5.05 0.00 0.00 3.02
4202 7786 4.755411 CCGGAAAGTATACAGAGCAGAAA 58.245 43.478 5.50 0.00 0.00 2.52
4203 7787 4.806247 CCGGAAAGTATACAGAGCAGAAAG 59.194 45.833 5.50 0.00 0.00 2.62
4204 7788 4.806247 CGGAAAGTATACAGAGCAGAAAGG 59.194 45.833 5.50 0.00 0.00 3.11
4205 7789 5.119694 GGAAAGTATACAGAGCAGAAAGGG 58.880 45.833 5.50 0.00 0.00 3.95
4206 7790 5.104900 GGAAAGTATACAGAGCAGAAAGGGA 60.105 44.000 5.50 0.00 0.00 4.20
4218 7802 3.434167 GCAGAAAGGGATCCATTAGCTCA 60.434 47.826 12.91 0.00 0.00 4.26
4227 7811 6.732862 AGGGATCCATTAGCTCATATGTAACT 59.267 38.462 15.23 1.74 0.00 2.24
4228 7812 7.044798 GGGATCCATTAGCTCATATGTAACTC 58.955 42.308 15.23 0.00 0.00 3.01
4230 7814 6.894339 TCCATTAGCTCATATGTAACTCGA 57.106 37.500 1.90 0.00 0.00 4.04
4236 7820 8.788325 TTAGCTCATATGTAACTCGATAGCTA 57.212 34.615 11.05 11.05 38.61 3.32
4244 7828 5.539979 TGTAACTCGATAGCTAGACTCGAT 58.460 41.667 16.07 7.29 40.29 3.59
4245 7829 6.685657 TGTAACTCGATAGCTAGACTCGATA 58.314 40.000 16.07 6.47 40.29 2.92
4248 7832 5.165676 ACTCGATAGCTAGACTCGATACTG 58.834 45.833 16.07 8.79 40.29 2.74
4253 7837 6.807720 CGATAGCTAGACTCGATACTGTTCTA 59.192 42.308 9.16 0.00 34.41 2.10
4254 7838 7.201376 CGATAGCTAGACTCGATACTGTTCTAC 60.201 44.444 9.16 0.00 34.41 2.59
4269 7858 9.915629 ATACTGTTCTACAAAAACTAGACTCTG 57.084 33.333 0.00 0.00 0.00 3.35
4270 7859 8.008513 ACTGTTCTACAAAAACTAGACTCTGA 57.991 34.615 0.00 0.00 0.00 3.27
4271 7860 7.921745 ACTGTTCTACAAAAACTAGACTCTGAC 59.078 37.037 0.00 0.00 0.00 3.51
4272 7861 7.778083 TGTTCTACAAAAACTAGACTCTGACA 58.222 34.615 0.00 0.00 0.00 3.58
4273 7862 7.705325 TGTTCTACAAAAACTAGACTCTGACAC 59.295 37.037 0.00 0.00 0.00 3.67
4274 7863 7.342769 TCTACAAAAACTAGACTCTGACACA 57.657 36.000 0.00 0.00 0.00 3.72
4276 7865 8.421784 TCTACAAAAACTAGACTCTGACACATT 58.578 33.333 0.00 0.00 0.00 2.71
4278 7867 8.958119 ACAAAAACTAGACTCTGACACATTAA 57.042 30.769 0.00 0.00 0.00 1.40
4279 7868 9.391006 ACAAAAACTAGACTCTGACACATTAAA 57.609 29.630 0.00 0.00 0.00 1.52
4280 7869 9.869844 CAAAAACTAGACTCTGACACATTAAAG 57.130 33.333 0.00 0.00 0.00 1.85
4283 7872 3.589988 AGACTCTGACACATTAAAGCCG 58.410 45.455 0.00 0.00 0.00 5.52
4286 7875 3.997021 ACTCTGACACATTAAAGCCGAAG 59.003 43.478 0.00 0.00 0.00 3.79
4287 7876 3.997021 CTCTGACACATTAAAGCCGAAGT 59.003 43.478 0.00 0.00 0.00 3.01
4288 7877 3.745975 TCTGACACATTAAAGCCGAAGTG 59.254 43.478 0.00 0.00 0.00 3.16
4289 7878 2.811431 TGACACATTAAAGCCGAAGTGG 59.189 45.455 0.00 0.00 42.50 4.00
4290 7879 2.159382 ACACATTAAAGCCGAAGTGGG 58.841 47.619 0.00 0.00 38.63 4.61
4298 7887 3.646715 CCGAAGTGGGGCCCTTCA 61.647 66.667 25.93 9.63 38.57 3.02
4299 7888 2.359975 CGAAGTGGGGCCCTTCAC 60.360 66.667 25.93 22.04 38.57 3.18
4300 7889 2.035783 GAAGTGGGGCCCTTCACC 59.964 66.667 25.93 4.58 38.53 4.02
4301 7890 2.452491 AAGTGGGGCCCTTCACCT 60.452 61.111 25.93 9.27 34.67 4.00
4302 7891 2.771328 GAAGTGGGGCCCTTCACCTG 62.771 65.000 25.93 0.00 38.53 4.00
4304 7893 2.208640 TGGGGCCCTTCACCTGTA 59.791 61.111 25.93 0.00 0.00 2.74
4305 7894 1.230149 TGGGGCCCTTCACCTGTAT 60.230 57.895 25.93 0.00 0.00 2.29
4306 7895 0.045008 TGGGGCCCTTCACCTGTATA 59.955 55.000 25.93 0.00 0.00 1.47
4307 7896 1.346046 TGGGGCCCTTCACCTGTATAT 60.346 52.381 25.93 0.00 0.00 0.86
4308 7897 1.351350 GGGGCCCTTCACCTGTATATC 59.649 57.143 24.38 0.00 0.00 1.63
4309 7898 2.054799 GGGCCCTTCACCTGTATATCA 58.945 52.381 17.04 0.00 0.00 2.15
4310 7899 2.441750 GGGCCCTTCACCTGTATATCAA 59.558 50.000 17.04 0.00 0.00 2.57
4311 7900 3.074538 GGGCCCTTCACCTGTATATCAAT 59.925 47.826 17.04 0.00 0.00 2.57
4313 7902 4.327680 GCCCTTCACCTGTATATCAATCC 58.672 47.826 0.00 0.00 0.00 3.01
4314 7903 4.042187 GCCCTTCACCTGTATATCAATCCT 59.958 45.833 0.00 0.00 0.00 3.24
4315 7904 5.456763 GCCCTTCACCTGTATATCAATCCTT 60.457 44.000 0.00 0.00 0.00 3.36
4316 7905 6.605119 CCCTTCACCTGTATATCAATCCTTT 58.395 40.000 0.00 0.00 0.00 3.11
4317 7906 6.712547 CCCTTCACCTGTATATCAATCCTTTC 59.287 42.308 0.00 0.00 0.00 2.62
4319 7908 7.659390 CCTTCACCTGTATATCAATCCTTTCTC 59.341 40.741 0.00 0.00 0.00 2.87
4320 7909 7.675161 TCACCTGTATATCAATCCTTTCTCA 57.325 36.000 0.00 0.00 0.00 3.27
4323 7912 9.347240 CACCTGTATATCAATCCTTTCTCATTT 57.653 33.333 0.00 0.00 0.00 2.32
4324 7913 9.566432 ACCTGTATATCAATCCTTTCTCATTTC 57.434 33.333 0.00 0.00 0.00 2.17
4325 7914 9.790344 CCTGTATATCAATCCTTTCTCATTTCT 57.210 33.333 0.00 0.00 0.00 2.52
4334 7923 9.631452 CAATCCTTTCTCATTTCTTTTCCTAAC 57.369 33.333 0.00 0.00 0.00 2.34
4335 7924 8.940397 ATCCTTTCTCATTTCTTTTCCTAACA 57.060 30.769 0.00 0.00 0.00 2.41
4336 7925 8.166422 TCCTTTCTCATTTCTTTTCCTAACAC 57.834 34.615 0.00 0.00 0.00 3.32
4338 7927 8.633561 CCTTTCTCATTTCTTTTCCTAACACTT 58.366 33.333 0.00 0.00 0.00 3.16
4341 7930 8.980481 TCTCATTTCTTTTCCTAACACTTTCT 57.020 30.769 0.00 0.00 0.00 2.52
4342 7931 8.840321 TCTCATTTCTTTTCCTAACACTTTCTG 58.160 33.333 0.00 0.00 0.00 3.02
4343 7932 8.746052 TCATTTCTTTTCCTAACACTTTCTGA 57.254 30.769 0.00 0.00 0.00 3.27
4344 7933 8.840321 TCATTTCTTTTCCTAACACTTTCTGAG 58.160 33.333 0.00 0.00 0.00 3.35
4345 7934 6.619801 TTCTTTTCCTAACACTTTCTGAGC 57.380 37.500 0.00 0.00 0.00 4.26
4346 7935 4.750098 TCTTTTCCTAACACTTTCTGAGCG 59.250 41.667 0.00 0.00 0.00 5.03
4347 7936 4.330944 TTTCCTAACACTTTCTGAGCGA 57.669 40.909 0.00 0.00 0.00 4.93
4348 7937 3.577649 TCCTAACACTTTCTGAGCGAG 57.422 47.619 0.00 0.00 0.00 5.03
4349 7938 3.154710 TCCTAACACTTTCTGAGCGAGA 58.845 45.455 0.00 0.00 0.00 4.04
4350 7939 3.191581 TCCTAACACTTTCTGAGCGAGAG 59.808 47.826 0.00 0.00 30.18 3.20
4351 7940 2.447244 AACACTTTCTGAGCGAGAGG 57.553 50.000 0.00 0.00 30.18 3.69
4353 7942 1.689273 ACACTTTCTGAGCGAGAGGTT 59.311 47.619 0.00 0.00 45.11 3.50
4355 7944 3.321111 ACACTTTCTGAGCGAGAGGTTTA 59.679 43.478 0.00 0.00 45.11 2.01
4357 7946 3.574826 ACTTTCTGAGCGAGAGGTTTACT 59.425 43.478 0.00 0.00 45.11 2.24
4358 7947 3.851976 TTCTGAGCGAGAGGTTTACTC 57.148 47.619 0.00 0.00 46.98 2.59
4372 7961 7.964604 GAGGTTTACTCATGTGTAACTCTTT 57.035 36.000 17.60 8.57 45.85 2.52
4373 7962 8.379457 GAGGTTTACTCATGTGTAACTCTTTT 57.621 34.615 17.60 3.85 45.85 2.27
4415 8036 3.441222 TGTGATGACCATGCTGAATTCAC 59.559 43.478 3.38 2.70 34.33 3.18
4433 8054 5.350504 TTCACATTTGCCTTTTTCCTTGA 57.649 34.783 0.00 0.00 0.00 3.02
4436 8057 6.454795 TCACATTTGCCTTTTTCCTTGATAC 58.545 36.000 0.00 0.00 0.00 2.24
4437 8058 6.041409 TCACATTTGCCTTTTTCCTTGATACA 59.959 34.615 0.00 0.00 0.00 2.29
4438 8059 6.705381 CACATTTGCCTTTTTCCTTGATACAA 59.295 34.615 0.00 0.00 0.00 2.41
4439 8060 7.388500 CACATTTGCCTTTTTCCTTGATACAAT 59.612 33.333 0.00 0.00 0.00 2.71
4440 8061 7.603784 ACATTTGCCTTTTTCCTTGATACAATC 59.396 33.333 0.00 0.00 0.00 2.67
4441 8062 6.662865 TTGCCTTTTTCCTTGATACAATCA 57.337 33.333 0.00 0.00 37.55 2.57
4442 8063 6.662865 TGCCTTTTTCCTTGATACAATCAA 57.337 33.333 2.60 2.60 46.30 2.57
4443 8064 6.454795 TGCCTTTTTCCTTGATACAATCAAC 58.545 36.000 0.00 0.00 43.84 3.18
4455 8076 8.902540 TTGATACAATCAACCTACCATATCAC 57.097 34.615 0.00 0.00 43.84 3.06
4459 8080 5.191722 ACAATCAACCTACCATATCACCAGT 59.808 40.000 0.00 0.00 0.00 4.00
4474 8095 4.160329 TCACCAGTGATATATGGACCCTC 58.840 47.826 7.84 0.00 39.02 4.30
4476 8097 5.075900 TCACCAGTGATATATGGACCCTCTA 59.924 44.000 7.84 0.00 39.02 2.43
4477 8098 5.960811 CACCAGTGATATATGGACCCTCTAT 59.039 44.000 7.84 0.00 39.02 1.98
4478 8099 7.036132 TCACCAGTGATATATGGACCCTCTATA 60.036 40.741 7.84 0.00 39.02 1.31
4479 8100 7.786943 CACCAGTGATATATGGACCCTCTATAT 59.213 40.741 7.84 0.00 39.02 0.86
4480 8101 8.007742 ACCAGTGATATATGGACCCTCTATATC 58.992 40.741 13.75 13.75 39.02 1.63
4481 8102 8.007153 CCAGTGATATATGGACCCTCTATATCA 58.993 40.741 16.84 16.84 40.19 2.15
4482 8103 9.599056 CAGTGATATATGGACCCTCTATATCAT 57.401 37.037 20.44 12.72 42.41 2.45
4490 8111 7.931015 TGGACCCTCTATATCATAAACAAGT 57.069 36.000 0.00 0.00 0.00 3.16
4491 8112 7.963532 TGGACCCTCTATATCATAAACAAGTC 58.036 38.462 0.00 0.00 0.00 3.01
4492 8113 7.567250 TGGACCCTCTATATCATAAACAAGTCA 59.433 37.037 0.00 0.00 0.00 3.41
4493 8114 7.873505 GGACCCTCTATATCATAAACAAGTCAC 59.126 40.741 0.00 0.00 0.00 3.67
4494 8115 8.554490 ACCCTCTATATCATAAACAAGTCACT 57.446 34.615 0.00 0.00 0.00 3.41
4495 8116 8.993424 ACCCTCTATATCATAAACAAGTCACTT 58.007 33.333 0.00 0.00 0.00 3.16
4496 8117 9.838339 CCCTCTATATCATAAACAAGTCACTTT 57.162 33.333 0.00 0.00 0.00 2.66
4512 8133 5.186797 AGTCACTTTTTGGACATGGTTTCAA 59.813 36.000 0.00 0.00 36.50 2.69
4515 8136 5.175491 CACTTTTTGGACATGGTTTCAATCG 59.825 40.000 0.00 0.00 0.00 3.34
4516 8137 3.296322 TTTGGACATGGTTTCAATCGC 57.704 42.857 0.00 0.00 0.00 4.58
4519 8140 2.625314 TGGACATGGTTTCAATCGCAAA 59.375 40.909 0.00 0.00 0.00 3.68
4527 8148 8.782144 ACATGGTTTCAATCGCAAATTTAAAAT 58.218 25.926 0.00 0.00 0.00 1.82
4586 8207 9.410556 ACTTGGATTGAAATTTGAAAATCGTAG 57.589 29.630 0.00 6.04 31.20 3.51
4588 8209 8.964420 TGGATTGAAATTTGAAAATCGTAGAC 57.036 30.769 0.00 0.00 42.51 2.59
4607 8228 8.248253 TCGTAGACAGATATTTGTACATGTGTT 58.752 33.333 9.11 0.00 29.60 3.32
4608 8229 8.869897 CGTAGACAGATATTTGTACATGTGTTT 58.130 33.333 9.11 0.00 29.60 2.83
4618 8239 4.946445 TGTACATGTGTTTAAGACGGTGA 58.054 39.130 9.11 0.00 0.00 4.02
4643 8264 5.722021 AAACCGGCAGTGAAATAATTTCT 57.278 34.783 0.00 0.00 40.32 2.52
4651 8272 8.004344 CGGCAGTGAAATAATTTCTATCTTACG 58.996 37.037 0.00 0.00 40.32 3.18
4682 8303 4.630894 TTTTCAGTAGTTGTGCAACCAG 57.369 40.909 11.00 0.65 42.06 4.00
4686 8315 4.566004 TCAGTAGTTGTGCAACCAGTATC 58.434 43.478 11.00 0.00 42.06 2.24
4687 8316 4.039852 TCAGTAGTTGTGCAACCAGTATCA 59.960 41.667 11.00 0.00 42.06 2.15
4694 8323 4.917385 TGTGCAACCAGTATCAACCTTAT 58.083 39.130 0.00 0.00 34.36 1.73
4718 8358 2.401583 TGACCTACACACATGGATGC 57.598 50.000 0.00 0.00 0.00 3.91
4726 8366 2.756760 ACACACATGGATGCCAGATTTC 59.243 45.455 0.00 0.00 36.75 2.17
4732 8372 5.350365 CACATGGATGCCAGATTTCTTTTTG 59.650 40.000 0.00 0.00 36.75 2.44
4734 8374 2.925563 GGATGCCAGATTTCTTTTTGCG 59.074 45.455 0.00 0.00 0.00 4.85
4735 8375 2.437200 TGCCAGATTTCTTTTTGCGG 57.563 45.000 0.00 0.00 0.00 5.69
4741 8381 2.962421 AGATTTCTTTTTGCGGGGAACA 59.038 40.909 0.00 0.00 0.00 3.18
4786 8426 3.950397 ACCTCTTTACAATCATTGGCGA 58.050 40.909 1.58 0.00 34.12 5.54
4790 8430 5.106157 CCTCTTTACAATCATTGGCGAGTTT 60.106 40.000 1.58 0.00 34.12 2.66
4794 8434 2.749621 ACAATCATTGGCGAGTTTCTCC 59.250 45.455 1.58 0.00 34.12 3.71
4796 8436 0.320374 TCATTGGCGAGTTTCTCCGT 59.680 50.000 0.00 0.00 0.00 4.69
4843 8484 2.360475 GCAGCTTCCACACCCCTC 60.360 66.667 0.00 0.00 0.00 4.30
4874 8515 1.929836 GTGCAAAGATCAGGAGCTACG 59.070 52.381 0.00 0.00 0.00 3.51
4888 8529 1.444917 GCTACGCCATTACAAGCCCC 61.445 60.000 0.00 0.00 0.00 5.80
4917 8558 4.346734 AAGCTGAAACTCATATTGTGCG 57.653 40.909 0.00 0.00 0.00 5.34
4940 8581 2.464865 CTCATAAGCTACACCGCTGTC 58.535 52.381 0.00 0.00 40.79 3.51
4945 8586 0.393077 AGCTACACCGCTGTCAAGTT 59.607 50.000 0.00 0.00 39.16 2.66
4946 8587 0.790814 GCTACACCGCTGTCAAGTTC 59.209 55.000 0.00 0.00 0.00 3.01
4950 8591 0.232303 CACCGCTGTCAAGTTCGAAC 59.768 55.000 20.71 20.71 0.00 3.95
4956 8597 2.276201 CTGTCAAGTTCGAACACCACA 58.724 47.619 28.78 23.15 0.00 4.17
4957 8598 2.004017 TGTCAAGTTCGAACACCACAC 58.996 47.619 28.78 17.12 0.00 3.82
4971 8612 2.027745 CACCACACTGATAGCAGAACCT 60.028 50.000 16.32 0.00 45.17 3.50
5001 8642 6.370718 CCTATAGTTAGAAACAACGCAACCTT 59.629 38.462 0.00 0.00 33.50 3.50
5015 8656 2.280628 CAACCTTCCGTTGCTATCCTC 58.719 52.381 0.00 0.00 45.16 3.71
5024 8665 1.069204 GTTGCTATCCTCGAGCCATCA 59.931 52.381 6.99 0.00 39.30 3.07
5038 8679 4.716794 GAGCCATCATCAAAGAGGAGATT 58.283 43.478 0.00 0.00 0.00 2.40
5095 8736 2.664402 ATACAGGAACCATGGCCATC 57.336 50.000 17.61 5.18 0.00 3.51
5125 8766 0.615544 TACCGGACCCTTGTCGGATT 60.616 55.000 9.46 0.00 42.66 3.01
5141 8782 1.003118 GGATTGAGCACCACCACACTA 59.997 52.381 0.00 0.00 0.00 2.74
5194 8835 1.490069 CCCCCAGCCCCATTTTTATTG 59.510 52.381 0.00 0.00 0.00 1.90
5207 8848 4.939052 TTTTTATTGGGAACGAGGCAAA 57.061 36.364 0.00 0.00 0.00 3.68
5216 8857 2.319472 GAACGAGGCAAACAAAGCATC 58.681 47.619 0.00 0.00 39.24 3.91
5220 8861 0.681175 AGGCAAACAAAGCATCCACC 59.319 50.000 0.00 0.00 0.00 4.61
5229 8870 3.317993 ACAAAGCATCCACCACTGTTAAC 59.682 43.478 0.00 0.00 0.00 2.01
5230 8871 3.508845 AAGCATCCACCACTGTTAACT 57.491 42.857 7.22 0.00 0.00 2.24
5232 8873 1.200020 GCATCCACCACTGTTAACTGC 59.800 52.381 11.98 3.94 0.00 4.40
5234 8875 0.466543 TCCACCACTGTTAACTGCGT 59.533 50.000 11.98 6.26 0.00 5.24
5240 8881 2.210116 CACTGTTAACTGCGTTCAGGT 58.790 47.619 11.98 0.00 44.54 4.00
5260 8901 3.403038 GTCAAGCCAAAGAGTAGCTGAA 58.597 45.455 0.00 0.00 36.84 3.02
5269 8910 6.173339 CCAAAGAGTAGCTGAACCAGAATTA 58.827 40.000 0.00 0.00 32.44 1.40
5281 8922 7.094377 GCTGAACCAGAATTAAACATTACAGGA 60.094 37.037 0.00 0.00 32.44 3.86
5283 8924 7.175990 TGAACCAGAATTAAACATTACAGGACC 59.824 37.037 0.00 0.00 0.00 4.46
5311 8952 5.813080 AAAGGAAACATAATGTCGCCTAC 57.187 39.130 0.00 0.00 34.18 3.18
5336 8977 0.179124 GGACGCTGCCAAAACAAACA 60.179 50.000 0.00 0.00 0.00 2.83
5338 8979 1.323235 GACGCTGCCAAAACAAACAAC 59.677 47.619 0.00 0.00 0.00 3.32
5350 8991 1.134946 ACAAACAACCAAGCACAGCTC 59.865 47.619 0.00 0.00 38.25 4.09
5372 9015 0.459899 TGCTATCGAATCAGCGGTGT 59.540 50.000 15.22 0.00 40.79 4.16
5373 9016 1.679153 TGCTATCGAATCAGCGGTGTA 59.321 47.619 15.22 1.71 40.79 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.041620 CCAGAAGACCCCCAATTCTCAA 59.958 50.000 0.00 0.00 30.99 3.02
1 2 1.635487 CCAGAAGACCCCCAATTCTCA 59.365 52.381 0.00 0.00 30.99 3.27
2 3 1.636003 ACCAGAAGACCCCCAATTCTC 59.364 52.381 0.00 0.00 30.99 2.87
3 4 1.636003 GACCAGAAGACCCCCAATTCT 59.364 52.381 0.00 0.00 33.62 2.40
4 5 1.341089 GGACCAGAAGACCCCCAATTC 60.341 57.143 0.00 0.00 0.00 2.17
5 6 0.704664 GGACCAGAAGACCCCCAATT 59.295 55.000 0.00 0.00 0.00 2.32
14 15 2.231716 TGATTCCGAGGACCAGAAGA 57.768 50.000 0.00 0.00 0.00 2.87
29 30 7.255520 GGCATCTGAAGCTGATAGAATTTGATT 60.256 37.037 4.77 0.00 0.00 2.57
34 35 5.163227 TGAGGCATCTGAAGCTGATAGAATT 60.163 40.000 4.77 0.00 0.00 2.17
39 40 4.268797 GATGAGGCATCTGAAGCTGATA 57.731 45.455 4.77 0.00 37.82 2.15
55 56 6.810911 TCGGAGGAGAATAAAGAAAGATGAG 58.189 40.000 0.00 0.00 0.00 2.90
56 57 6.183360 CCTCGGAGGAGAATAAAGAAAGATGA 60.183 42.308 19.57 0.00 43.27 2.92
76 77 1.050988 ACCCATGACATCCTCCTCGG 61.051 60.000 0.00 0.00 0.00 4.63
78 79 1.134280 CACACCCATGACATCCTCCTC 60.134 57.143 0.00 0.00 0.00 3.71
79 80 0.914644 CACACCCATGACATCCTCCT 59.085 55.000 0.00 0.00 0.00 3.69
80 81 0.107017 CCACACCCATGACATCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
90 91 2.118076 CACCAAGGCCACACCCAT 59.882 61.111 5.01 0.00 40.58 4.00
95 96 2.521465 CCAAGCACCAAGGCCACA 60.521 61.111 5.01 0.00 0.00 4.17
109 110 2.283101 GTGCCCCATGTGCTCCAA 60.283 61.111 6.10 0.00 0.00 3.53
110 111 2.842188 GATGTGCCCCATGTGCTCCA 62.842 60.000 6.10 3.77 32.56 3.86
112 113 2.475466 CGATGTGCCCCATGTGCTC 61.475 63.158 6.10 3.43 32.56 4.26
115 116 2.475466 GCTCGATGTGCCCCATGTG 61.475 63.158 0.00 0.00 32.56 3.21
116 117 1.337384 TAGCTCGATGTGCCCCATGT 61.337 55.000 0.00 0.00 32.56 3.21
119 120 1.264749 AACTAGCTCGATGTGCCCCA 61.265 55.000 0.00 0.00 0.00 4.96
122 123 3.376540 CTCTTAACTAGCTCGATGTGCC 58.623 50.000 0.00 0.00 0.00 5.01
131 132 1.751924 CACTCGGGCTCTTAACTAGCT 59.248 52.381 0.00 0.00 39.97 3.32
137 138 1.134788 GCTTAGCACTCGGGCTCTTAA 60.135 52.381 0.00 0.00 44.54 1.85
138 139 0.460311 GCTTAGCACTCGGGCTCTTA 59.540 55.000 0.00 0.00 44.54 2.10
146 147 4.212214 GGAATATGGAAAGCTTAGCACTCG 59.788 45.833 7.07 0.00 0.00 4.18
147 148 4.517075 GGGAATATGGAAAGCTTAGCACTC 59.483 45.833 7.07 1.80 0.00 3.51
148 149 4.464947 GGGAATATGGAAAGCTTAGCACT 58.535 43.478 7.07 0.00 0.00 4.40
149 150 3.570125 GGGGAATATGGAAAGCTTAGCAC 59.430 47.826 7.07 0.00 0.00 4.40
152 153 5.388654 ACATGGGGAATATGGAAAGCTTAG 58.611 41.667 0.00 0.00 0.00 2.18
156 157 3.960102 TCAACATGGGGAATATGGAAAGC 59.040 43.478 0.00 0.00 0.00 3.51
172 173 1.561542 GGATCCTCACCAGGTCAACAT 59.438 52.381 3.84 0.00 41.28 2.71
198 199 2.311841 ACCTAGGTTCTTTTCCATGGGG 59.688 50.000 9.21 2.63 0.00 4.96
237 238 4.074970 ACTTGGTTACAGAGCATTTGAGG 58.925 43.478 0.00 0.00 35.33 3.86
241 242 6.296026 TGTAGAACTTGGTTACAGAGCATTT 58.704 36.000 0.00 0.00 35.33 2.32
250 251 7.305474 CCACAATCAATGTAGAACTTGGTTAC 58.695 38.462 0.00 0.00 41.46 2.50
256 257 6.603201 CCATACCCACAATCAATGTAGAACTT 59.397 38.462 0.00 0.00 41.46 2.66
292 293 9.582648 AATAACTTTACATTCCTTGTGGTAAGT 57.417 29.630 0.00 0.00 39.48 2.24
316 317 3.744426 GCTGCAAGTTGATCTGCAAAAAT 59.256 39.130 7.16 0.00 38.44 1.82
320 321 1.612676 AGCTGCAAGTTGATCTGCAA 58.387 45.000 7.16 0.00 36.81 4.08
328 329 0.110328 CTGCTCGAAGCTGCAAGTTG 60.110 55.000 1.02 0.00 42.97 3.16
332 333 1.877637 TTTACTGCTCGAAGCTGCAA 58.122 45.000 1.02 5.08 42.95 4.08
342 343 5.982465 TGCAAAACCAAAATTTACTGCTC 57.018 34.783 0.00 0.00 30.15 4.26
368 369 1.682854 CTCAAGCTTGCCCAAAAGACA 59.317 47.619 21.99 0.00 0.00 3.41
378 379 1.403323 GAACCATAGGCTCAAGCTTGC 59.597 52.381 21.99 10.98 41.70 4.01
379 380 2.996631 AGAACCATAGGCTCAAGCTTG 58.003 47.619 20.81 20.81 41.70 4.01
381 382 5.379706 AATAAGAACCATAGGCTCAAGCT 57.620 39.130 1.46 0.00 41.70 3.74
382 383 6.203723 CAGTAATAAGAACCATAGGCTCAAGC 59.796 42.308 0.00 0.00 41.14 4.01
383 384 7.225538 CACAGTAATAAGAACCATAGGCTCAAG 59.774 40.741 0.00 0.00 0.00 3.02
385 386 6.156256 ACACAGTAATAAGAACCATAGGCTCA 59.844 38.462 0.00 0.00 0.00 4.26
386 387 6.480320 CACACAGTAATAAGAACCATAGGCTC 59.520 42.308 0.00 0.00 0.00 4.70
387 388 6.156256 TCACACAGTAATAAGAACCATAGGCT 59.844 38.462 0.00 0.00 0.00 4.58
388 389 6.346096 TCACACAGTAATAAGAACCATAGGC 58.654 40.000 0.00 0.00 0.00 3.93
389 390 8.204160 TCATCACACAGTAATAAGAACCATAGG 58.796 37.037 0.00 0.00 0.00 2.57
390 391 9.035607 GTCATCACACAGTAATAAGAACCATAG 57.964 37.037 0.00 0.00 0.00 2.23
392 393 6.823689 GGTCATCACACAGTAATAAGAACCAT 59.176 38.462 0.00 0.00 0.00 3.55
393 394 6.170506 GGTCATCACACAGTAATAAGAACCA 58.829 40.000 0.00 0.00 0.00 3.67
394 395 6.170506 TGGTCATCACACAGTAATAAGAACC 58.829 40.000 0.00 0.00 0.00 3.62
395 396 7.334421 ACATGGTCATCACACAGTAATAAGAAC 59.666 37.037 0.00 0.00 0.00 3.01
396 397 7.394016 ACATGGTCATCACACAGTAATAAGAA 58.606 34.615 0.00 0.00 0.00 2.52
397 398 6.946340 ACATGGTCATCACACAGTAATAAGA 58.054 36.000 0.00 0.00 0.00 2.10
398 399 7.414429 CCAACATGGTCATCACACAGTAATAAG 60.414 40.741 0.00 0.00 31.35 1.73
399 400 6.374053 CCAACATGGTCATCACACAGTAATAA 59.626 38.462 0.00 0.00 31.35 1.40
400 401 5.879777 CCAACATGGTCATCACACAGTAATA 59.120 40.000 0.00 0.00 31.35 0.98
401 402 4.701651 CCAACATGGTCATCACACAGTAAT 59.298 41.667 0.00 0.00 31.35 1.89
424 425 2.557056 GGCAAGGAGTCAAAAGTTACCC 59.443 50.000 0.00 0.00 0.00 3.69
439 440 7.281549 TCGATGATGATATGATAAATGGCAAGG 59.718 37.037 0.00 0.00 0.00 3.61
479 480 8.860088 ACATGCCTAAAAAGTCACTTATTTCTT 58.140 29.630 0.00 0.00 0.00 2.52
493 494 7.341445 AGTTTGAGTACAACATGCCTAAAAA 57.659 32.000 0.00 0.00 35.63 1.94
545 547 4.656041 GTGCATCTTCAGTCTGCATAAAC 58.344 43.478 9.13 0.00 46.52 2.01
551 553 1.293963 TGCGTGCATCTTCAGTCTGC 61.294 55.000 0.00 0.00 36.45 4.26
568 570 6.916387 CACAAATTCAGTTATGAGGATGATGC 59.084 38.462 0.00 0.00 36.61 3.91
576 578 8.239314 ACACTTATGCACAAATTCAGTTATGAG 58.761 33.333 0.00 0.00 36.61 2.90
592 594 8.611757 GTCACATTGTTCATATACACTTATGCA 58.388 33.333 0.00 0.00 31.02 3.96
595 597 9.109393 GTGGTCACATTGTTCATATACACTTAT 57.891 33.333 0.00 0.00 0.00 1.73
596 598 8.097662 TGTGGTCACATTGTTCATATACACTTA 58.902 33.333 0.00 0.00 36.21 2.24
598 600 6.472016 TGTGGTCACATTGTTCATATACACT 58.528 36.000 0.00 0.00 36.21 3.55
599 601 6.735678 TGTGGTCACATTGTTCATATACAC 57.264 37.500 0.00 0.00 36.21 2.90
600 602 6.128418 CGTTGTGGTCACATTGTTCATATACA 60.128 38.462 4.53 0.00 41.52 2.29
623 1068 1.472878 ACTAGACATGTCATGACGCGT 59.527 47.619 27.02 13.85 0.00 6.01
625 1070 3.428746 AGACTAGACATGTCATGACGC 57.571 47.619 27.02 11.17 36.94 5.19
656 1101 6.492007 AGATAGCGAGGATAAAATGCATTG 57.508 37.500 13.82 0.00 0.00 2.82
657 1102 7.516198 AAAGATAGCGAGGATAAAATGCATT 57.484 32.000 5.99 5.99 0.00 3.56
686 1149 2.642996 TTCGGCATCATCGACCGCAT 62.643 55.000 6.54 0.00 46.49 4.73
687 1150 2.844072 TTTCGGCATCATCGACCGCA 62.844 55.000 6.54 0.00 46.49 5.69
688 1151 2.094126 CTTTCGGCATCATCGACCGC 62.094 60.000 6.54 0.00 46.49 5.68
707 1170 0.307760 CAAACCAGGACAACGAGTGC 59.692 55.000 0.00 0.00 39.14 4.40
710 1173 2.943033 AGAAACAAACCAGGACAACGAG 59.057 45.455 0.00 0.00 0.00 4.18
711 1174 2.680841 CAGAAACAAACCAGGACAACGA 59.319 45.455 0.00 0.00 0.00 3.85
712 1175 2.680841 TCAGAAACAAACCAGGACAACG 59.319 45.455 0.00 0.00 0.00 4.10
713 1176 3.694566 AGTCAGAAACAAACCAGGACAAC 59.305 43.478 0.00 0.00 0.00 3.32
716 1179 3.315470 GGAAGTCAGAAACAAACCAGGAC 59.685 47.826 0.00 0.00 0.00 3.85
717 1180 3.053991 TGGAAGTCAGAAACAAACCAGGA 60.054 43.478 0.00 0.00 0.00 3.86
718 1181 3.287222 TGGAAGTCAGAAACAAACCAGG 58.713 45.455 0.00 0.00 0.00 4.45
719 1182 4.981806 TTGGAAGTCAGAAACAAACCAG 57.018 40.909 0.00 0.00 31.71 4.00
720 1183 8.877864 ATATATTGGAAGTCAGAAACAAACCA 57.122 30.769 0.00 0.00 0.00 3.67
721 1184 9.573133 CAATATATTGGAAGTCAGAAACAAACC 57.427 33.333 16.41 0.00 34.22 3.27
738 1201 6.017605 GGAGAGCAGACACAACCAATATATTG 60.018 42.308 17.11 17.11 37.52 1.90
739 1202 6.058183 GGAGAGCAGACACAACCAATATATT 58.942 40.000 0.00 0.00 0.00 1.28
740 1203 5.367937 AGGAGAGCAGACACAACCAATATAT 59.632 40.000 0.00 0.00 0.00 0.86
741 1204 4.716784 AGGAGAGCAGACACAACCAATATA 59.283 41.667 0.00 0.00 0.00 0.86
742 1205 3.521126 AGGAGAGCAGACACAACCAATAT 59.479 43.478 0.00 0.00 0.00 1.28
743 1206 2.906389 AGGAGAGCAGACACAACCAATA 59.094 45.455 0.00 0.00 0.00 1.90
744 1207 1.701847 AGGAGAGCAGACACAACCAAT 59.298 47.619 0.00 0.00 0.00 3.16
754 1217 5.221722 ACAAAATACAGTTGAGGAGAGCAGA 60.222 40.000 0.00 0.00 0.00 4.26
785 1248 6.058833 TGCTCCAAATTAACAGTGTAGACAA 58.941 36.000 0.00 0.00 0.00 3.18
791 1254 6.403866 TTCAATGCTCCAAATTAACAGTGT 57.596 33.333 0.00 0.00 0.00 3.55
952 3342 8.181573 GGAACGTTTCTGCTGAATCATTAATTA 58.818 33.333 0.46 0.00 31.56 1.40
967 3357 1.993370 CGAGGCTAAGGAACGTTTCTG 59.007 52.381 10.57 0.00 0.00 3.02
970 3360 0.672711 GCCGAGGCTAAGGAACGTTT 60.673 55.000 12.15 0.00 38.26 3.60
1002 3403 2.003301 CCTTGAGTTTTAGAGAGCGCC 58.997 52.381 2.29 0.00 0.00 6.53
1014 3415 0.767060 ACCGGGGTCTTCCTTGAGTT 60.767 55.000 6.32 0.00 35.33 3.01
1022 3423 0.109913 AGTTTTCCACCGGGGTCTTC 59.890 55.000 6.32 0.00 38.11 2.87
1073 3478 2.522638 CCGGCGCGTAACTTCATCC 61.523 63.158 8.43 0.00 0.00 3.51
1146 3551 2.335011 CACTCGCGACACCTCACA 59.665 61.111 3.71 0.00 0.00 3.58
1290 3695 3.063084 GACGACGGCACCTCCTCT 61.063 66.667 0.00 0.00 0.00 3.69
1335 3746 3.470888 AGGAACCCATCGGCCTCG 61.471 66.667 0.00 0.00 37.82 4.63
1347 3758 2.617274 GGCGTTGCTCCACAGGAAC 61.617 63.158 0.00 0.00 45.23 3.62
1352 3763 3.364441 GCATGGCGTTGCTCCACA 61.364 61.111 5.11 0.00 39.57 4.17
1489 3907 2.424601 CCTCCAAACATAGTCGTCGGTA 59.575 50.000 0.00 0.00 0.00 4.02
1515 3945 1.661341 CTAGCCATTGCCAGTCAGTC 58.339 55.000 0.00 0.00 38.69 3.51
1545 3975 2.477694 GCAAACAAACAAAAAGGCAGCC 60.478 45.455 1.84 1.84 0.00 4.85
1550 3980 3.727376 CGGCAAGCAAACAAACAAAAAGG 60.727 43.478 0.00 0.00 0.00 3.11
1626 4056 4.213906 CGTTTGGATCTGCATGCATACATA 59.786 41.667 22.97 6.70 33.63 2.29
1666 4100 4.074970 CAGCTGGTCAGGATTAAAAGTGT 58.925 43.478 5.57 0.00 0.00 3.55
1698 4132 3.249320 CCTTGTCAATGGATAGACATGCG 59.751 47.826 0.00 0.00 43.57 4.73
1700 4134 6.457392 CGTTTCCTTGTCAATGGATAGACATG 60.457 42.308 0.00 0.00 43.57 3.21
1715 4156 5.240623 TGAATTAATCAGCACGTTTCCTTGT 59.759 36.000 0.00 0.00 33.04 3.16
1940 4388 2.007608 GACTTTGCCATCGGGAAGTAC 58.992 52.381 0.00 0.00 33.87 2.73
1957 4405 1.306642 CCGTGTAGAGCAGGACGACT 61.307 60.000 0.00 0.00 35.14 4.18
2094 4542 1.954382 GAAAGTCCTTTTTGCCGGTCT 59.046 47.619 1.90 0.00 32.11 3.85
2113 4561 4.451150 GCTGTCATGGGGTCGCGA 62.451 66.667 3.71 3.71 0.00 5.87
2441 4895 1.573108 AGTCCGATTCCCACATCTGT 58.427 50.000 0.00 0.00 0.00 3.41
2578 5032 1.002134 CTGGACGTTTGCCCATCCT 60.002 57.895 0.00 0.00 32.06 3.24
2616 5072 7.917720 AAACACGTGGTAAAACATATCAAAC 57.082 32.000 21.57 0.00 0.00 2.93
2732 5191 6.867799 TGCAAGTTAACAATCGCATAAATG 57.132 33.333 8.61 0.00 0.00 2.32
2733 5192 8.477984 AAATGCAAGTTAACAATCGCATAAAT 57.522 26.923 18.32 9.65 39.06 1.40
2734 5193 7.881643 AAATGCAAGTTAACAATCGCATAAA 57.118 28.000 18.32 0.00 39.06 1.40
2735 5194 9.232082 GATAAATGCAAGTTAACAATCGCATAA 57.768 29.630 18.32 12.80 39.06 1.90
2736 5195 8.401709 TGATAAATGCAAGTTAACAATCGCATA 58.598 29.630 18.32 9.16 39.06 3.14
2737 5196 7.257003 TGATAAATGCAAGTTAACAATCGCAT 58.743 30.769 8.61 12.29 41.60 4.73
2738 5197 6.616017 TGATAAATGCAAGTTAACAATCGCA 58.384 32.000 8.61 10.57 26.32 5.10
2739 5198 7.645340 AGATGATAAATGCAAGTTAACAATCGC 59.355 33.333 8.61 5.11 33.11 4.58
2740 5199 9.507280 AAGATGATAAATGCAAGTTAACAATCG 57.493 29.630 8.61 0.00 33.11 3.34
2742 5201 9.090692 GCAAGATGATAAATGCAAGTTAACAAT 57.909 29.630 8.61 0.00 33.11 2.71
2743 5202 8.087136 TGCAAGATGATAAATGCAAGTTAACAA 58.913 29.630 8.61 0.00 45.04 2.83
2744 5203 7.600960 TGCAAGATGATAAATGCAAGTTAACA 58.399 30.769 8.61 0.00 45.04 2.41
2759 5587 6.147581 GCATAATGAACGAATGCAAGATGAT 58.852 36.000 0.00 0.00 44.27 2.45
2849 5677 7.520451 ACTAAAGCGTGTCTATATACATCCA 57.480 36.000 0.00 0.00 0.00 3.41
2878 5708 7.671302 ACGTATAGGCTGAAATGAGTGAATAT 58.329 34.615 0.00 0.00 0.00 1.28
3018 5849 3.940221 GACGTTCTCAGAGAGCCTAGTTA 59.060 47.826 8.59 0.00 0.00 2.24
3019 5850 2.750712 GACGTTCTCAGAGAGCCTAGTT 59.249 50.000 8.59 0.00 0.00 2.24
3020 5851 2.361789 GACGTTCTCAGAGAGCCTAGT 58.638 52.381 8.59 1.33 0.00 2.57
3021 5852 1.329292 CGACGTTCTCAGAGAGCCTAG 59.671 57.143 8.59 0.00 0.00 3.02
3037 5868 5.283060 ACCTTTTTGAATCAGATTCGACG 57.717 39.130 16.82 7.36 42.15 5.12
3038 5869 6.668323 TGAACCTTTTTGAATCAGATTCGAC 58.332 36.000 16.82 3.94 42.15 4.20
3047 5878 7.961325 TGCCTAATTTGAACCTTTTTGAATC 57.039 32.000 0.00 0.00 0.00 2.52
3049 5880 8.744568 AAATGCCTAATTTGAACCTTTTTGAA 57.255 26.923 0.00 0.00 37.09 2.69
3067 5898 3.021695 CACAGACATGATGGAAATGCCT 58.978 45.455 0.00 0.00 37.63 4.75
3068 5899 2.480759 GCACAGACATGATGGAAATGCC 60.481 50.000 0.00 0.00 37.10 4.40
3084 5915 1.202463 ACGAGCTGGCTTATAGCACAG 60.202 52.381 0.00 10.75 44.75 3.66
3128 5959 5.594317 AGATTCAGCGGGCAACTTAATAAAT 59.406 36.000 0.00 0.00 0.00 1.40
3130 5961 4.523083 AGATTCAGCGGGCAACTTAATAA 58.477 39.130 0.00 0.00 0.00 1.40
3131 5962 4.150897 AGATTCAGCGGGCAACTTAATA 57.849 40.909 0.00 0.00 0.00 0.98
3143 5974 1.146637 GCCTGCTCATAGATTCAGCG 58.853 55.000 0.00 0.00 35.81 5.18
3152 5983 3.054875 ACATTGTCTCTTGCCTGCTCATA 60.055 43.478 0.00 0.00 0.00 2.15
3173 6004 9.704098 CTTTTCTTCTAACTAATAATTCGCCAC 57.296 33.333 0.00 0.00 0.00 5.01
3212 6764 5.687780 TGATCATGATGGCACTTTGATACT 58.312 37.500 14.30 0.00 0.00 2.12
3261 6826 5.134202 TCGCCTACATCATACACCATTAG 57.866 43.478 0.00 0.00 0.00 1.73
3328 6899 2.438434 CTCCACCGGCCATTGGAC 60.438 66.667 16.85 1.46 36.96 4.02
3418 6989 2.042259 CGGCTTGGCAGAGATGCAA 61.042 57.895 2.29 0.00 36.33 4.08
3474 7045 0.832626 TGTGGGATGCGATGTCAGAT 59.167 50.000 0.00 0.00 0.00 2.90
3588 7168 4.588899 AGTACATTGCCATTTGCTCACTA 58.411 39.130 0.00 0.00 42.00 2.74
3594 7174 4.142687 ACGTAGAAGTACATTGCCATTTGC 60.143 41.667 0.00 0.00 41.77 3.68
3624 7204 4.698625 AGTCCCCCGTCGAGGCTT 62.699 66.667 0.00 0.00 39.21 4.35
3732 7312 2.973052 GCGGATAAAGCCTCGCCC 60.973 66.667 0.00 0.00 42.02 6.13
3822 7402 2.196742 AGATGGCCTCAGTGGGATAA 57.803 50.000 3.32 0.00 36.00 1.75
3825 7405 1.043116 CGTAGATGGCCTCAGTGGGA 61.043 60.000 3.32 0.00 36.00 4.37
3828 7408 0.387202 CCTCGTAGATGGCCTCAGTG 59.613 60.000 3.32 0.00 33.89 3.66
3880 7460 0.965866 TCGACGGTCATTCTGGAGCT 60.966 55.000 9.10 0.00 33.24 4.09
3887 7467 0.248702 GAGCCTCTCGACGGTCATTC 60.249 60.000 9.10 0.00 0.00 2.67
3941 7521 9.804547 GAAATTAATCTCGTGCATAAAGATCTC 57.195 33.333 0.00 0.00 0.00 2.75
3985 7565 7.595819 TGAAAAATTCAGACACCCAACTTAT 57.404 32.000 0.00 0.00 34.08 1.73
3992 7572 5.979517 CAGAACTTGAAAAATTCAGACACCC 59.020 40.000 0.00 0.00 41.38 4.61
3996 7576 7.697691 TCTGACAGAACTTGAAAAATTCAGAC 58.302 34.615 1.64 0.00 41.38 3.51
4009 7593 5.954752 TGACTAGATCCATCTGACAGAACTT 59.045 40.000 9.70 0.00 37.76 2.66
4053 7637 7.117812 CCGACAGTAACAGTCTGTGATATTTTT 59.882 37.037 6.18 0.00 44.68 1.94
4058 7642 3.119602 GCCGACAGTAACAGTCTGTGATA 60.120 47.826 6.18 0.00 44.68 2.15
4065 7649 0.240411 ACGAGCCGACAGTAACAGTC 59.760 55.000 1.50 0.00 0.00 3.51
4067 7651 1.779569 AAACGAGCCGACAGTAACAG 58.220 50.000 1.50 0.00 0.00 3.16
4078 7662 1.303309 ATCTGCTGCATAAACGAGCC 58.697 50.000 1.31 0.00 31.31 4.70
4098 7682 0.190069 ACCTGTCCACCCACTAGACA 59.810 55.000 0.00 0.00 38.17 3.41
4099 7683 0.608640 CACCTGTCCACCCACTAGAC 59.391 60.000 0.00 0.00 0.00 2.59
4101 7685 1.553690 CCCACCTGTCCACCCACTAG 61.554 65.000 0.00 0.00 0.00 2.57
4102 7686 1.537889 CCCACCTGTCCACCCACTA 60.538 63.158 0.00 0.00 0.00 2.74
4103 7687 2.854032 CCCACCTGTCCACCCACT 60.854 66.667 0.00 0.00 0.00 4.00
4104 7688 3.175710 ACCCACCTGTCCACCCAC 61.176 66.667 0.00 0.00 0.00 4.61
4106 7690 3.966543 CCACCCACCTGTCCACCC 61.967 72.222 0.00 0.00 0.00 4.61
4107 7691 3.175710 ACCACCCACCTGTCCACC 61.176 66.667 0.00 0.00 0.00 4.61
4108 7692 2.430367 GACCACCCACCTGTCCAC 59.570 66.667 0.00 0.00 0.00 4.02
4109 7693 2.852075 GGACCACCCACCTGTCCA 60.852 66.667 3.14 0.00 46.29 4.02
4118 7702 1.609210 CCAACCCAATGGACCACCC 60.609 63.158 0.00 0.00 43.54 4.61
4119 7703 0.406361 TACCAACCCAATGGACCACC 59.594 55.000 0.00 0.00 43.54 4.61
4120 7704 2.525105 ATACCAACCCAATGGACCAC 57.475 50.000 0.00 0.00 43.54 4.16
4121 7705 3.053245 CCTAATACCAACCCAATGGACCA 60.053 47.826 0.00 0.00 43.54 4.02
4122 7706 3.562182 CCTAATACCAACCCAATGGACC 58.438 50.000 0.00 0.00 43.54 4.46
4123 7707 2.956333 GCCTAATACCAACCCAATGGAC 59.044 50.000 0.00 0.00 43.54 4.02
4124 7708 2.856231 AGCCTAATACCAACCCAATGGA 59.144 45.455 0.00 0.00 43.54 3.41
4125 7709 2.958355 CAGCCTAATACCAACCCAATGG 59.042 50.000 0.00 0.00 46.38 3.16
4126 7710 2.958355 CCAGCCTAATACCAACCCAATG 59.042 50.000 0.00 0.00 0.00 2.82
4127 7711 2.856231 TCCAGCCTAATACCAACCCAAT 59.144 45.455 0.00 0.00 0.00 3.16
4128 7712 2.025699 GTCCAGCCTAATACCAACCCAA 60.026 50.000 0.00 0.00 0.00 4.12
4129 7713 1.562475 GTCCAGCCTAATACCAACCCA 59.438 52.381 0.00 0.00 0.00 4.51
4130 7714 1.474498 CGTCCAGCCTAATACCAACCC 60.474 57.143 0.00 0.00 0.00 4.11
4131 7715 1.474498 CCGTCCAGCCTAATACCAACC 60.474 57.143 0.00 0.00 0.00 3.77
4134 7718 2.091720 TCTACCGTCCAGCCTAATACCA 60.092 50.000 0.00 0.00 0.00 3.25
4139 7723 0.627451 TCCTCTACCGTCCAGCCTAA 59.373 55.000 0.00 0.00 0.00 2.69
4140 7724 0.183014 CTCCTCTACCGTCCAGCCTA 59.817 60.000 0.00 0.00 0.00 3.93
4142 7726 1.380112 ACTCCTCTACCGTCCAGCC 60.380 63.158 0.00 0.00 0.00 4.85
4150 7734 3.243907 CGATGGAAATGGACTCCTCTACC 60.244 52.174 0.00 0.00 33.77 3.18
4154 7738 1.202698 CCCGATGGAAATGGACTCCTC 60.203 57.143 0.00 0.00 33.77 3.71
4156 7740 0.546598 ACCCGATGGAAATGGACTCC 59.453 55.000 0.00 0.00 34.81 3.85
4159 7743 2.572290 CCTTACCCGATGGAAATGGAC 58.428 52.381 0.00 0.00 34.81 4.02
4176 7760 2.158943 GCTCTGTATACTTTCCGGCCTT 60.159 50.000 0.00 0.00 0.00 4.35
4187 7771 4.345257 TGGATCCCTTTCTGCTCTGTATAC 59.655 45.833 9.90 0.00 0.00 1.47
4188 7772 4.556697 TGGATCCCTTTCTGCTCTGTATA 58.443 43.478 9.90 0.00 0.00 1.47
4189 7773 3.387962 TGGATCCCTTTCTGCTCTGTAT 58.612 45.455 9.90 0.00 0.00 2.29
4190 7774 2.832838 TGGATCCCTTTCTGCTCTGTA 58.167 47.619 9.90 0.00 0.00 2.74
4191 7775 1.661463 TGGATCCCTTTCTGCTCTGT 58.339 50.000 9.90 0.00 0.00 3.41
4192 7776 3.294038 AATGGATCCCTTTCTGCTCTG 57.706 47.619 9.90 0.00 0.00 3.35
4193 7777 3.181446 GCTAATGGATCCCTTTCTGCTCT 60.181 47.826 9.90 0.00 0.00 4.09
4194 7778 3.145286 GCTAATGGATCCCTTTCTGCTC 58.855 50.000 9.90 0.00 0.00 4.26
4195 7779 2.782341 AGCTAATGGATCCCTTTCTGCT 59.218 45.455 9.90 12.76 31.42 4.24
4196 7780 3.145286 GAGCTAATGGATCCCTTTCTGC 58.855 50.000 9.90 10.84 0.00 4.26
4197 7781 4.428294 TGAGCTAATGGATCCCTTTCTG 57.572 45.455 9.90 1.52 0.00 3.02
4198 7782 6.274200 ACATATGAGCTAATGGATCCCTTTCT 59.726 38.462 10.38 6.61 0.00 2.52
4199 7783 6.479884 ACATATGAGCTAATGGATCCCTTTC 58.520 40.000 10.38 1.20 0.00 2.62
4200 7784 6.460103 ACATATGAGCTAATGGATCCCTTT 57.540 37.500 10.38 5.77 0.00 3.11
4201 7785 7.238514 AGTTACATATGAGCTAATGGATCCCTT 59.761 37.037 10.38 8.54 0.00 3.95
4202 7786 6.732862 AGTTACATATGAGCTAATGGATCCCT 59.267 38.462 10.38 0.00 0.00 4.20
4203 7787 6.951971 AGTTACATATGAGCTAATGGATCCC 58.048 40.000 10.38 0.00 0.00 3.85
4204 7788 6.754209 CGAGTTACATATGAGCTAATGGATCC 59.246 42.308 10.38 4.20 0.00 3.36
4205 7789 7.539436 TCGAGTTACATATGAGCTAATGGATC 58.461 38.462 10.38 0.00 0.00 3.36
4206 7790 7.468141 TCGAGTTACATATGAGCTAATGGAT 57.532 36.000 10.38 0.00 0.00 3.41
4218 7802 7.321908 TCGAGTCTAGCTATCGAGTTACATAT 58.678 38.462 12.67 0.00 40.29 1.78
4228 7812 5.636121 AGAACAGTATCGAGTCTAGCTATCG 59.364 44.000 8.60 8.60 37.79 2.92
4230 7814 7.443477 TGTAGAACAGTATCGAGTCTAGCTAT 58.557 38.462 0.00 0.00 0.00 2.97
4236 7820 7.659186 AGTTTTTGTAGAACAGTATCGAGTCT 58.341 34.615 0.00 0.00 0.00 3.24
4244 7828 9.128404 TCAGAGTCTAGTTTTTGTAGAACAGTA 57.872 33.333 0.00 0.00 0.00 2.74
4245 7829 7.921745 GTCAGAGTCTAGTTTTTGTAGAACAGT 59.078 37.037 0.00 0.00 0.00 3.55
4248 7832 7.705325 TGTGTCAGAGTCTAGTTTTTGTAGAAC 59.295 37.037 0.00 0.00 0.00 3.01
4253 7837 8.958119 TTAATGTGTCAGAGTCTAGTTTTTGT 57.042 30.769 0.00 0.00 0.00 2.83
4254 7838 9.869844 CTTTAATGTGTCAGAGTCTAGTTTTTG 57.130 33.333 0.00 0.00 0.00 2.44
4268 7857 2.811431 CCACTTCGGCTTTAATGTGTCA 59.189 45.455 0.00 0.00 0.00 3.58
4269 7858 2.161609 CCCACTTCGGCTTTAATGTGTC 59.838 50.000 0.00 0.00 0.00 3.67
4270 7859 2.159382 CCCACTTCGGCTTTAATGTGT 58.841 47.619 0.00 0.00 0.00 3.72
4271 7860 1.472480 CCCCACTTCGGCTTTAATGTG 59.528 52.381 0.00 0.00 0.00 3.21
4272 7861 1.834188 CCCCACTTCGGCTTTAATGT 58.166 50.000 0.00 0.00 0.00 2.71
4273 7862 0.455815 GCCCCACTTCGGCTTTAATG 59.544 55.000 0.00 0.00 43.48 1.90
4274 7863 0.683179 GGCCCCACTTCGGCTTTAAT 60.683 55.000 0.00 0.00 46.24 1.40
4276 7865 2.353573 GGCCCCACTTCGGCTTTA 59.646 61.111 0.00 0.00 46.24 1.85
4283 7872 2.035783 GGTGAAGGGCCCCACTTC 59.964 66.667 25.05 19.91 43.52 3.01
4286 7875 1.571773 ATACAGGTGAAGGGCCCCAC 61.572 60.000 21.43 20.52 0.00 4.61
4287 7876 0.045008 TATACAGGTGAAGGGCCCCA 59.955 55.000 21.43 7.57 0.00 4.96
4288 7877 1.351350 GATATACAGGTGAAGGGCCCC 59.649 57.143 21.43 4.15 0.00 5.80
4289 7878 2.054799 TGATATACAGGTGAAGGGCCC 58.945 52.381 16.46 16.46 0.00 5.80
4290 7879 3.857157 TTGATATACAGGTGAAGGGCC 57.143 47.619 0.00 0.00 0.00 5.80
4292 7881 5.832539 AGGATTGATATACAGGTGAAGGG 57.167 43.478 0.00 0.00 0.00 3.95
4293 7882 7.512992 AGAAAGGATTGATATACAGGTGAAGG 58.487 38.462 0.00 0.00 0.00 3.46
4294 7883 8.206867 TGAGAAAGGATTGATATACAGGTGAAG 58.793 37.037 0.00 0.00 0.00 3.02
4295 7884 8.089625 TGAGAAAGGATTGATATACAGGTGAA 57.910 34.615 0.00 0.00 0.00 3.18
4296 7885 7.675161 TGAGAAAGGATTGATATACAGGTGA 57.325 36.000 0.00 0.00 0.00 4.02
4297 7886 8.915057 AATGAGAAAGGATTGATATACAGGTG 57.085 34.615 0.00 0.00 0.00 4.00
4298 7887 9.566432 GAAATGAGAAAGGATTGATATACAGGT 57.434 33.333 0.00 0.00 0.00 4.00
4299 7888 9.790344 AGAAATGAGAAAGGATTGATATACAGG 57.210 33.333 0.00 0.00 0.00 4.00
4305 7894 9.759473 AGGAAAAGAAATGAGAAAGGATTGATA 57.241 29.630 0.00 0.00 0.00 2.15
4306 7895 8.661752 AGGAAAAGAAATGAGAAAGGATTGAT 57.338 30.769 0.00 0.00 0.00 2.57
4307 7896 9.586732 TTAGGAAAAGAAATGAGAAAGGATTGA 57.413 29.630 0.00 0.00 0.00 2.57
4308 7897 9.631452 GTTAGGAAAAGAAATGAGAAAGGATTG 57.369 33.333 0.00 0.00 0.00 2.67
4309 7898 9.367160 TGTTAGGAAAAGAAATGAGAAAGGATT 57.633 29.630 0.00 0.00 0.00 3.01
4310 7899 8.797438 GTGTTAGGAAAAGAAATGAGAAAGGAT 58.203 33.333 0.00 0.00 0.00 3.24
4311 7900 7.998964 AGTGTTAGGAAAAGAAATGAGAAAGGA 59.001 33.333 0.00 0.00 0.00 3.36
4315 7904 9.408648 AGAAAGTGTTAGGAAAAGAAATGAGAA 57.591 29.630 0.00 0.00 0.00 2.87
4316 7905 8.840321 CAGAAAGTGTTAGGAAAAGAAATGAGA 58.160 33.333 0.00 0.00 0.00 3.27
4317 7906 8.840321 TCAGAAAGTGTTAGGAAAAGAAATGAG 58.160 33.333 0.00 0.00 0.00 2.90
4319 7908 7.592903 GCTCAGAAAGTGTTAGGAAAAGAAATG 59.407 37.037 0.00 0.00 0.00 2.32
4320 7909 7.520614 CGCTCAGAAAGTGTTAGGAAAAGAAAT 60.521 37.037 0.00 0.00 0.00 2.17
4323 7912 4.750098 CGCTCAGAAAGTGTTAGGAAAAGA 59.250 41.667 0.00 0.00 0.00 2.52
4324 7913 4.750098 TCGCTCAGAAAGTGTTAGGAAAAG 59.250 41.667 0.00 0.00 36.81 2.27
4325 7914 4.699637 TCGCTCAGAAAGTGTTAGGAAAA 58.300 39.130 0.00 0.00 36.81 2.29
4326 7915 4.038763 TCTCGCTCAGAAAGTGTTAGGAAA 59.961 41.667 0.00 0.00 36.81 3.13
4327 7916 3.572682 TCTCGCTCAGAAAGTGTTAGGAA 59.427 43.478 0.00 0.00 36.81 3.36
4328 7917 3.154710 TCTCGCTCAGAAAGTGTTAGGA 58.845 45.455 0.00 0.00 36.81 2.94
4329 7918 3.506810 CTCTCGCTCAGAAAGTGTTAGG 58.493 50.000 0.00 0.00 36.81 2.69
4334 7923 2.447244 AACCTCTCGCTCAGAAAGTG 57.553 50.000 0.00 0.00 36.80 3.16
4335 7924 3.574826 AGTAAACCTCTCGCTCAGAAAGT 59.425 43.478 0.00 0.00 0.00 2.66
4336 7925 4.170256 GAGTAAACCTCTCGCTCAGAAAG 58.830 47.826 0.00 0.00 37.22 2.62
4338 7927 3.154710 TGAGTAAACCTCTCGCTCAGAA 58.845 45.455 0.00 0.00 41.11 3.02
4339 7928 2.791655 TGAGTAAACCTCTCGCTCAGA 58.208 47.619 0.00 0.00 41.11 3.27
4340 7929 3.119316 ACATGAGTAAACCTCTCGCTCAG 60.119 47.826 0.00 0.00 41.11 3.35
4341 7930 2.826128 ACATGAGTAAACCTCTCGCTCA 59.174 45.455 0.00 0.00 41.11 4.26
4342 7931 3.182967 CACATGAGTAAACCTCTCGCTC 58.817 50.000 0.00 0.00 41.11 5.03
4343 7932 2.563179 ACACATGAGTAAACCTCTCGCT 59.437 45.455 0.00 0.00 41.11 4.93
4344 7933 2.960819 ACACATGAGTAAACCTCTCGC 58.039 47.619 0.00 0.00 41.11 5.03
4345 7934 5.710984 AGTTACACATGAGTAAACCTCTCG 58.289 41.667 15.97 0.00 41.11 4.04
4346 7935 6.926313 AGAGTTACACATGAGTAAACCTCTC 58.074 40.000 20.64 18.66 41.11 3.20
4347 7936 6.919775 AGAGTTACACATGAGTAAACCTCT 57.080 37.500 20.64 20.64 41.11 3.69
4348 7937 7.964604 AAAGAGTTACACATGAGTAAACCTC 57.035 36.000 15.97 17.21 40.89 3.85
4349 7938 8.747538 AAAAAGAGTTACACATGAGTAAACCT 57.252 30.769 15.97 12.82 35.88 3.50
4373 7962 4.013728 ACAGAGCAATATACCCGCAAAAA 58.986 39.130 0.00 0.00 0.00 1.94
4377 7966 1.760029 TCACAGAGCAATATACCCGCA 59.240 47.619 0.00 0.00 0.00 5.69
4378 7967 2.526304 TCACAGAGCAATATACCCGC 57.474 50.000 0.00 0.00 0.00 6.13
4379 7968 3.990469 GTCATCACAGAGCAATATACCCG 59.010 47.826 0.00 0.00 0.00 5.28
4380 7969 4.202357 TGGTCATCACAGAGCAATATACCC 60.202 45.833 0.00 0.00 42.45 3.69
4381 7970 4.960938 TGGTCATCACAGAGCAATATACC 58.039 43.478 0.00 0.00 42.45 2.73
4389 7978 1.015109 CAGCATGGTCATCACAGAGC 58.985 55.000 0.00 0.00 36.59 4.09
4415 8036 7.603404 TGATTGTATCAAGGAAAAAGGCAAATG 59.397 33.333 0.00 0.00 36.11 2.32
4433 8054 7.072454 ACTGGTGATATGGTAGGTTGATTGTAT 59.928 37.037 0.00 0.00 0.00 2.29
4436 8057 5.528690 CACTGGTGATATGGTAGGTTGATTG 59.471 44.000 0.00 0.00 0.00 2.67
4437 8058 5.428457 TCACTGGTGATATGGTAGGTTGATT 59.572 40.000 0.00 0.00 34.14 2.57
4438 8059 4.968719 TCACTGGTGATATGGTAGGTTGAT 59.031 41.667 0.00 0.00 34.14 2.57
4439 8060 4.358214 TCACTGGTGATATGGTAGGTTGA 58.642 43.478 0.00 0.00 34.14 3.18
4440 8061 4.753516 TCACTGGTGATATGGTAGGTTG 57.246 45.455 0.00 0.00 34.14 3.77
4455 8076 8.007153 TGATATAGAGGGTCCATATATCACTGG 58.993 40.741 19.77 0.00 40.99 4.00
4464 8085 9.615660 ACTTGTTTATGATATAGAGGGTCCATA 57.384 33.333 0.00 0.00 0.00 2.74
4465 8086 8.511748 ACTTGTTTATGATATAGAGGGTCCAT 57.488 34.615 0.00 0.00 0.00 3.41
4467 8088 7.873505 GTGACTTGTTTATGATATAGAGGGTCC 59.126 40.741 0.00 0.00 0.00 4.46
4468 8089 8.643324 AGTGACTTGTTTATGATATAGAGGGTC 58.357 37.037 0.00 0.00 0.00 4.46
4469 8090 8.554490 AGTGACTTGTTTATGATATAGAGGGT 57.446 34.615 0.00 0.00 0.00 4.34
4477 8098 9.126151 TGTCCAAAAAGTGACTTGTTTATGATA 57.874 29.630 0.00 0.00 32.67 2.15
4478 8099 8.006298 TGTCCAAAAAGTGACTTGTTTATGAT 57.994 30.769 0.00 0.00 32.67 2.45
4479 8100 7.397892 TGTCCAAAAAGTGACTTGTTTATGA 57.602 32.000 0.00 0.00 32.67 2.15
4480 8101 7.169645 CCATGTCCAAAAAGTGACTTGTTTATG 59.830 37.037 0.00 2.27 35.83 1.90
4481 8102 7.147742 ACCATGTCCAAAAAGTGACTTGTTTAT 60.148 33.333 0.00 0.00 35.83 1.40
4482 8103 6.153680 ACCATGTCCAAAAAGTGACTTGTTTA 59.846 34.615 0.00 0.00 35.83 2.01
4483 8104 5.046663 ACCATGTCCAAAAAGTGACTTGTTT 60.047 36.000 0.00 0.00 35.83 2.83
4485 8106 4.023291 ACCATGTCCAAAAAGTGACTTGT 58.977 39.130 0.00 0.00 35.83 3.16
4486 8107 4.654091 ACCATGTCCAAAAAGTGACTTG 57.346 40.909 0.00 0.00 36.77 3.16
4487 8108 5.186797 TGAAACCATGTCCAAAAAGTGACTT 59.813 36.000 0.00 0.00 32.67 3.01
4488 8109 4.709397 TGAAACCATGTCCAAAAAGTGACT 59.291 37.500 0.00 0.00 32.67 3.41
4489 8110 5.004922 TGAAACCATGTCCAAAAAGTGAC 57.995 39.130 0.00 0.00 0.00 3.67
4490 8111 5.667539 TTGAAACCATGTCCAAAAAGTGA 57.332 34.783 0.00 0.00 0.00 3.41
4491 8112 5.175491 CGATTGAAACCATGTCCAAAAAGTG 59.825 40.000 0.00 0.00 0.00 3.16
4492 8113 5.288804 CGATTGAAACCATGTCCAAAAAGT 58.711 37.500 0.00 0.00 0.00 2.66
4493 8114 4.150451 GCGATTGAAACCATGTCCAAAAAG 59.850 41.667 0.00 0.00 0.00 2.27
4494 8115 4.054671 GCGATTGAAACCATGTCCAAAAA 58.945 39.130 0.00 0.00 0.00 1.94
4495 8116 3.068732 TGCGATTGAAACCATGTCCAAAA 59.931 39.130 0.00 0.00 0.00 2.44
4496 8117 2.625314 TGCGATTGAAACCATGTCCAAA 59.375 40.909 0.00 0.00 0.00 3.28
4497 8118 2.234143 TGCGATTGAAACCATGTCCAA 58.766 42.857 0.00 0.00 0.00 3.53
4498 8119 1.902938 TGCGATTGAAACCATGTCCA 58.097 45.000 0.00 0.00 0.00 4.02
4560 8181 9.410556 CTACGATTTTCAAATTTCAATCCAAGT 57.589 29.630 0.00 4.78 0.00 3.16
4561 8182 9.624697 TCTACGATTTTCAAATTTCAATCCAAG 57.375 29.630 0.00 6.51 0.00 3.61
4562 8183 9.405587 GTCTACGATTTTCAAATTTCAATCCAA 57.594 29.630 0.00 0.00 0.00 3.53
4563 8184 8.572185 TGTCTACGATTTTCAAATTTCAATCCA 58.428 29.630 0.00 0.70 0.00 3.41
4564 8185 8.964420 TGTCTACGATTTTCAAATTTCAATCC 57.036 30.769 0.00 0.00 0.00 3.01
4565 8186 9.825972 TCTGTCTACGATTTTCAAATTTCAATC 57.174 29.630 0.00 0.00 0.00 2.67
4588 8209 9.689075 CGTCTTAAACACATGTACAAATATCTG 57.311 33.333 0.00 0.00 0.00 2.90
4618 8239 7.836842 AGAAATTATTTCACTGCCGGTTTTAT 58.163 30.769 18.37 0.00 42.10 1.40
4666 8287 4.617253 TGATACTGGTTGCACAACTACT 57.383 40.909 12.87 0.00 40.94 2.57
4667 8288 4.083484 GGTTGATACTGGTTGCACAACTAC 60.083 45.833 12.87 0.00 40.94 2.73
4672 8293 2.949177 AGGTTGATACTGGTTGCACA 57.051 45.000 0.00 0.00 0.00 4.57
4702 8331 1.210234 TCTGGCATCCATGTGTGTAGG 59.790 52.381 0.00 0.00 30.82 3.18
4718 8358 1.892474 TCCCCGCAAAAAGAAATCTGG 59.108 47.619 0.00 0.00 0.00 3.86
4726 8366 1.069978 ACCATTGTTCCCCGCAAAAAG 59.930 47.619 0.00 0.00 0.00 2.27
4732 8372 3.603158 ATAAAAACCATTGTTCCCCGC 57.397 42.857 0.00 0.00 32.15 6.13
4766 8406 3.941483 ACTCGCCAATGATTGTAAAGAGG 59.059 43.478 4.27 0.00 0.00 3.69
4810 8451 3.922175 GCAGTTTTGCGGCTTGAC 58.078 55.556 0.00 0.00 41.13 3.18
4825 8466 3.177884 AGGGGTGTGGAAGCTGCA 61.178 61.111 1.02 0.00 0.00 4.41
4874 8515 0.324275 TGAAGGGGGCTTGTAATGGC 60.324 55.000 0.00 0.00 35.70 4.40
4888 8529 7.335422 ACAATATGAGTTTCAGCTTAGTGAAGG 59.665 37.037 0.00 0.00 37.72 3.46
4928 8569 1.060713 CGAACTTGACAGCGGTGTAG 58.939 55.000 21.92 17.59 36.88 2.74
4934 8575 0.232303 GGTGTTCGAACTTGACAGCG 59.768 55.000 27.32 0.00 0.00 5.18
4940 8581 2.276201 TCAGTGTGGTGTTCGAACTTG 58.724 47.619 27.32 14.02 0.00 3.16
4945 8586 1.616374 TGCTATCAGTGTGGTGTTCGA 59.384 47.619 0.00 0.00 0.00 3.71
4946 8587 1.995484 CTGCTATCAGTGTGGTGTTCG 59.005 52.381 0.00 0.00 35.61 3.95
4950 8591 2.027745 AGGTTCTGCTATCAGTGTGGTG 60.028 50.000 0.00 0.00 41.10 4.17
4956 8597 2.393646 GGGAGAGGTTCTGCTATCAGT 58.606 52.381 0.00 0.00 41.10 3.41
4957 8598 1.691434 GGGGAGAGGTTCTGCTATCAG 59.309 57.143 0.00 0.00 41.67 2.90
4971 8612 5.163478 GCGTTGTTTCTAACTATAGGGGAGA 60.163 44.000 4.43 0.82 0.00 3.71
5001 8642 1.734137 GCTCGAGGATAGCAACGGA 59.266 57.895 15.58 0.00 39.83 4.69
5006 8647 1.547820 GATGATGGCTCGAGGATAGCA 59.452 52.381 15.58 0.00 41.93 3.49
5007 8648 1.547820 TGATGATGGCTCGAGGATAGC 59.452 52.381 15.58 0.00 39.33 2.97
5015 8656 2.102084 TCTCCTCTTTGATGATGGCTCG 59.898 50.000 0.00 0.00 0.00 5.03
5024 8665 3.942829 TGCGTTGAATCTCCTCTTTGAT 58.057 40.909 0.00 0.00 0.00 2.57
5038 8679 2.747460 GCTGAGGCCATGCGTTGA 60.747 61.111 5.01 0.00 0.00 3.18
5081 8722 2.123295 GGGGATGGCCATGGTTCC 60.123 66.667 26.56 19.32 35.15 3.62
5125 8766 1.550524 GAGATAGTGTGGTGGTGCTCA 59.449 52.381 0.00 0.00 0.00 4.26
5194 8835 0.318699 GCTTTGTTTGCCTCGTTCCC 60.319 55.000 0.00 0.00 0.00 3.97
5207 8848 2.071778 AACAGTGGTGGATGCTTTGT 57.928 45.000 0.00 0.00 0.00 2.83
5216 8857 3.000815 ACGCAGTTAACAGTGGTGG 57.999 52.632 14.96 0.00 37.78 4.61
5229 8870 1.165907 TTGGCTTGACCTGAACGCAG 61.166 55.000 0.00 0.00 41.93 5.18
5230 8871 0.749818 TTTGGCTTGACCTGAACGCA 60.750 50.000 0.00 0.00 40.22 5.24
5232 8873 1.532868 CTCTTTGGCTTGACCTGAACG 59.467 52.381 0.00 0.00 40.22 3.95
5234 8875 3.807209 GCTACTCTTTGGCTTGACCTGAA 60.807 47.826 0.00 0.00 40.22 3.02
5240 8881 3.403038 GTTCAGCTACTCTTTGGCTTGA 58.597 45.455 0.00 0.00 33.74 3.02
5260 8901 6.790319 AGGTCCTGTAATGTTTAATTCTGGT 58.210 36.000 0.00 0.00 0.00 4.00
5269 8910 7.284919 CCTTTTGTAAGGTCCTGTAATGTTT 57.715 36.000 0.00 0.00 45.01 2.83
5283 8924 6.526674 GGCGACATTATGTTTCCTTTTGTAAG 59.473 38.462 0.00 0.00 0.00 2.34
5305 8946 3.539107 GCGTCCGTTTCGTAGGCG 61.539 66.667 0.00 0.00 39.92 5.52
5306 8947 2.126189 AGCGTCCGTTTCGTAGGC 60.126 61.111 0.00 0.00 0.00 3.93
5311 8952 2.381665 TTTTGGCAGCGTCCGTTTCG 62.382 55.000 0.00 0.00 0.00 3.46
5313 8954 1.065109 GTTTTGGCAGCGTCCGTTT 59.935 52.632 0.00 0.00 0.00 3.60
5316 8957 1.064946 TTTGTTTTGGCAGCGTCCG 59.935 52.632 0.00 0.00 0.00 4.79
5336 8977 2.111878 AGCGAGCTGTGCTTGGTT 59.888 55.556 4.24 0.00 46.97 3.67
5338 8979 4.099170 GCAGCGAGCTGTGCTTGG 62.099 66.667 23.79 0.00 45.24 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.