Multiple sequence alignment - TraesCS7A01G009500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G009500 chr7A 100.000 4853 0 0 1 4853 4209960 4205108 0.000000e+00 8962
1 TraesCS7A01G009500 chr7A 81.699 918 152 13 1792 2701 4329851 4328942 0.000000e+00 750
2 TraesCS7A01G009500 chr7A 81.408 909 158 10 1792 2695 4254334 4253432 0.000000e+00 732
3 TraesCS7A01G009500 chr7A 81.867 750 129 6 2935 3681 4328638 4327893 4.120000e-175 625
4 TraesCS7A01G009500 chr7A 79.167 696 133 9 3009 3701 4252806 4252120 5.690000e-129 472
5 TraesCS7A01G009500 chr7A 86.940 268 33 2 4165 4431 193688748 193689014 2.840000e-77 300
6 TraesCS7A01G009500 chr7D 93.592 2169 90 26 1742 3871 4414157 4411999 0.000000e+00 3190
7 TraesCS7A01G009500 chr7D 86.371 1761 99 55 1 1720 4415791 4414131 0.000000e+00 1792
8 TraesCS7A01G009500 chr7D 79.053 1943 326 51 1792 3681 4503405 4501491 0.000000e+00 1258
9 TraesCS7A01G009500 chr7D 80.900 911 159 13 1792 2695 4425722 4424820 0.000000e+00 704
10 TraesCS7A01G009500 chr7D 79.464 672 124 12 3009 3676 4424232 4423571 9.510000e-127 464
11 TraesCS7A01G009500 chr7D 95.276 254 11 1 3864 4116 400864665 400864918 7.570000e-108 401
12 TraesCS7A01G009500 chr7D 76.637 672 140 11 3006 3667 4289593 4288929 5.970000e-94 355
13 TraesCS7A01G009500 chr7D 86.347 271 37 0 4171 4441 279149561 279149831 3.670000e-76 296
14 TraesCS7A01G009500 chr7D 91.026 78 2 3 4480 4556 400865332 400865405 3.090000e-17 100
15 TraesCS7A01G009500 chr4A 93.175 2110 100 19 1747 3816 739152604 739154709 0.000000e+00 3059
16 TraesCS7A01G009500 chr4A 87.799 877 64 15 843 1709 739151599 739152442 0.000000e+00 987
17 TraesCS7A01G009500 chr4A 80.667 750 138 6 2935 3681 739080503 739081248 4.210000e-160 575
18 TraesCS7A01G009500 chr4A 80.296 675 119 12 3006 3676 739131523 739132187 9.380000e-137 497
19 TraesCS7A01G009500 chr4A 77.293 665 140 7 3006 3663 739275475 739276135 9.860000e-102 381
20 TraesCS7A01G009500 chr4A 83.023 430 28 14 1 417 739150793 739151190 1.000000e-91 348
21 TraesCS7A01G009500 chr4A 76.424 632 135 12 3035 3659 738887512 738886888 3.620000e-86 329
22 TraesCS7A01G009500 chr4A 87.313 268 34 0 4169 4436 76629425 76629158 1.700000e-79 307
23 TraesCS7A01G009500 chr4A 92.265 181 12 1 4675 4853 584281954 584282134 6.230000e-64 255
24 TraesCS7A01G009500 chr2A 92.430 251 19 0 3871 4121 333707997 333708247 4.620000e-95 359
25 TraesCS7A01G009500 chr2A 86.891 267 35 0 4171 4437 1507295 1507029 2.840000e-77 300
26 TraesCS7A01G009500 chr2A 86.905 252 33 0 3870 4121 631433411 631433662 2.860000e-72 283
27 TraesCS7A01G009500 chr2A 93.194 191 11 1 4665 4853 419484144 419483954 3.700000e-71 279
28 TraesCS7A01G009500 chr2A 84.264 197 16 5 4480 4675 333708838 333709020 1.390000e-40 178
29 TraesCS7A01G009500 chr3D 89.231 260 26 2 3863 4121 358327878 358328136 1.680000e-84 324
30 TraesCS7A01G009500 chr3D 86.667 270 34 2 4169 4437 109257942 109257674 1.020000e-76 298
31 TraesCS7A01G009500 chr2D 89.837 246 23 2 3871 4116 5909192 5909435 1.010000e-81 315
32 TraesCS7A01G009500 chr4D 88.672 256 26 1 3861 4116 64588950 64588698 4.720000e-80 309
33 TraesCS7A01G009500 chr2B 87.640 267 32 1 4171 4437 458090523 458090258 4.720000e-80 309
34 TraesCS7A01G009500 chr3A 87.313 268 34 0 4169 4436 488313628 488313895 1.700000e-79 307
35 TraesCS7A01G009500 chr3A 85.824 261 36 1 3862 4121 644941038 644941298 4.780000e-70 276
36 TraesCS7A01G009500 chr3A 92.265 181 12 1 4675 4853 660861848 660861668 6.230000e-64 255
37 TraesCS7A01G009500 chr3A 90.374 187 16 1 4669 4853 648533569 648533755 1.350000e-60 244
38 TraesCS7A01G009500 chr3A 88.945 199 19 2 4658 4853 660662094 660661896 4.850000e-60 243
39 TraesCS7A01G009500 chr1A 87.452 263 33 0 4174 4436 530175320 530175058 2.190000e-78 303
40 TraesCS7A01G009500 chr5A 86.891 267 35 0 4171 4437 51462292 51462026 2.840000e-77 300
41 TraesCS7A01G009500 chr5A 91.848 184 11 3 4666 4847 467415781 467415962 2.240000e-63 254
42 TraesCS7A01G009500 chr6A 91.713 181 13 1 4675 4853 26629976 26630156 2.900000e-62 250
43 TraesCS7A01G009500 chr6B 90.426 188 16 1 4668 4853 63260558 63260745 3.750000e-61 246
44 TraesCS7A01G009500 chr6D 89.744 195 14 5 4662 4853 460305760 460305951 1.350000e-60 244
45 TraesCS7A01G009500 chr7B 86.364 198 24 3 3861 4056 488352239 488352435 3.800000e-51 213
46 TraesCS7A01G009500 chr4B 86.911 191 23 2 3867 4056 581066330 581066519 3.800000e-51 213


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G009500 chr7A 4205108 4209960 4852 True 8962.000000 8962 100.0000 1 4853 1 chr7A.!!$R1 4852
1 TraesCS7A01G009500 chr7A 4327893 4329851 1958 True 687.500000 750 81.7830 1792 3681 2 chr7A.!!$R3 1889
2 TraesCS7A01G009500 chr7A 4252120 4254334 2214 True 602.000000 732 80.2875 1792 3701 2 chr7A.!!$R2 1909
3 TraesCS7A01G009500 chr7D 4411999 4415791 3792 True 2491.000000 3190 89.9815 1 3871 2 chr7D.!!$R3 3870
4 TraesCS7A01G009500 chr7D 4501491 4503405 1914 True 1258.000000 1258 79.0530 1792 3681 1 chr7D.!!$R2 1889
5 TraesCS7A01G009500 chr7D 4423571 4425722 2151 True 584.000000 704 80.1820 1792 3676 2 chr7D.!!$R4 1884
6 TraesCS7A01G009500 chr7D 4288929 4289593 664 True 355.000000 355 76.6370 3006 3667 1 chr7D.!!$R1 661
7 TraesCS7A01G009500 chr7D 400864665 400865405 740 False 250.500000 401 93.1510 3864 4556 2 chr7D.!!$F2 692
8 TraesCS7A01G009500 chr4A 739150793 739154709 3916 False 1464.666667 3059 87.9990 1 3816 3 chr4A.!!$F5 3815
9 TraesCS7A01G009500 chr4A 739080503 739081248 745 False 575.000000 575 80.6670 2935 3681 1 chr4A.!!$F2 746
10 TraesCS7A01G009500 chr4A 739131523 739132187 664 False 497.000000 497 80.2960 3006 3676 1 chr4A.!!$F3 670
11 TraesCS7A01G009500 chr4A 739275475 739276135 660 False 381.000000 381 77.2930 3006 3663 1 chr4A.!!$F4 657
12 TraesCS7A01G009500 chr4A 738886888 738887512 624 True 329.000000 329 76.4240 3035 3659 1 chr4A.!!$R2 624
13 TraesCS7A01G009500 chr2A 333707997 333709020 1023 False 268.500000 359 88.3470 3871 4675 2 chr2A.!!$F2 804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
665 705 0.251653 TTCAGCACGAGTAGGGTCCT 60.252 55.000 0.0 0.0 0.00 3.85 F
1000 1057 0.250727 CCCTTTCCAGTTCCGAAGCA 60.251 55.000 0.0 0.0 0.00 3.91 F
1598 1676 0.386838 ACTGTCTTTTGCTTGCTGGC 59.613 50.000 0.0 0.0 0.00 4.85 F
1599 1677 0.662374 CTGTCTTTTGCTTGCTGGCG 60.662 55.000 0.0 0.0 34.52 5.69 F
2005 2217 1.077501 CCCAATGGCACGGTCATCT 60.078 57.895 0.0 0.0 0.00 2.90 F
3676 4279 1.098050 GGCCTCAGCACCAATACAAG 58.902 55.000 0.0 0.0 42.56 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1599 1677 0.455005 GTAGGTAGCCACGTCAGTCC 59.545 60.000 0.0 0.0 0.00 3.85 R
2005 2217 0.665835 CTGTTGCCCGTGTAAAGCAA 59.334 50.000 0.0 0.0 43.83 3.91 R
2496 2708 1.000843 CAATCGACCCTCATGCCGATA 59.999 52.381 0.0 0.0 40.35 2.92 R
3297 3897 1.288188 TGGTGGCATGGATGAGAAGA 58.712 50.000 0.0 0.0 0.00 2.87 R
3789 4408 2.483877 TGCTGCATAAAGGTTTCAGACG 59.516 45.455 0.0 0.0 0.00 4.18 R
4703 5828 0.028902 GTGTGGACGAGTTGGCAAAC 59.971 55.000 0.0 0.0 36.47 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 8.570096 TTGTCTATATGTGTATAAGCGTTGTC 57.430 34.615 0.00 0.00 0.00 3.18
176 177 5.869344 CGTCTATTGTGAAGTCTCATTTCCA 59.131 40.000 0.00 0.00 33.05 3.53
195 196 5.319043 TCCAAGAACTTTACTCCATGGTT 57.681 39.130 12.58 2.52 0.00 3.67
227 229 3.072184 GGAACCACTCATGCATCCTAGAT 59.928 47.826 0.00 0.00 0.00 1.98
238 240 2.106566 CATCCTAGATGGCGAGCCTAT 58.893 52.381 15.75 7.16 36.94 2.57
251 253 4.399618 GGCGAGCCTATCATATTACTCTCA 59.600 45.833 6.90 0.00 0.00 3.27
271 273 9.775539 ACTCTCACTCTCTCTATATCTCTATCT 57.224 37.037 0.00 0.00 0.00 1.98
273 275 9.997172 TCTCACTCTCTCTATATCTCTATCTCT 57.003 37.037 0.00 0.00 0.00 3.10
275 277 9.997172 TCACTCTCTCTATATCTCTATCTCTCT 57.003 37.037 0.00 0.00 0.00 3.10
423 437 8.424274 TTCTTCTATGTAGTGCACATAACATG 57.576 34.615 28.45 21.36 46.92 3.21
457 471 4.503296 GGTTGTCTCATGTTCACACCTACT 60.503 45.833 0.00 0.00 0.00 2.57
482 496 7.057894 TGGATTTGTTGTACTCTTTAGTTGGT 58.942 34.615 0.00 0.00 37.15 3.67
507 521 5.181811 GTGTTGGATGTTGTGATCAATGAGA 59.818 40.000 0.00 0.00 35.92 3.27
526 540 6.126863 TGAGATTGGAACCACTCATTAGTT 57.873 37.500 12.42 0.00 35.01 2.24
547 561 2.439701 AGCGGCGAGGCTAGTACA 60.440 61.111 12.98 0.00 42.62 2.90
550 564 1.442526 GCGGCGAGGCTAGTACACTA 61.443 60.000 12.98 0.00 0.00 2.74
596 610 7.307632 GCACGCATCATCTTCATAACTCTATTT 60.308 37.037 0.00 0.00 0.00 1.40
603 617 8.432805 TCATCTTCATAACTCTATTTTCTCCCC 58.567 37.037 0.00 0.00 0.00 4.81
604 618 7.996758 TCTTCATAACTCTATTTTCTCCCCT 57.003 36.000 0.00 0.00 0.00 4.79
605 619 8.024145 TCTTCATAACTCTATTTTCTCCCCTC 57.976 38.462 0.00 0.00 0.00 4.30
607 621 7.749377 TCATAACTCTATTTTCTCCCCTCAA 57.251 36.000 0.00 0.00 0.00 3.02
610 645 3.197983 ACTCTATTTTCTCCCCTCAACCG 59.802 47.826 0.00 0.00 0.00 4.44
612 647 0.698818 ATTTTCTCCCCTCAACCGCT 59.301 50.000 0.00 0.00 0.00 5.52
650 690 2.525055 CCACACACAAACCGTTTTCAG 58.475 47.619 0.00 0.00 0.00 3.02
662 702 1.604693 CGTTTTCAGCACGAGTAGGGT 60.605 52.381 0.00 0.00 40.20 4.34
663 703 2.067013 GTTTTCAGCACGAGTAGGGTC 58.933 52.381 0.00 0.00 0.00 4.46
665 705 0.251653 TTCAGCACGAGTAGGGTCCT 60.252 55.000 0.00 0.00 0.00 3.85
679 719 2.302587 GGTCCTGACCCAAAATCCAA 57.697 50.000 4.93 0.00 45.68 3.53
681 721 2.593026 GTCCTGACCCAAAATCCAACA 58.407 47.619 0.00 0.00 0.00 3.33
682 722 2.962421 GTCCTGACCCAAAATCCAACAA 59.038 45.455 0.00 0.00 0.00 2.83
684 724 4.040339 GTCCTGACCCAAAATCCAACAAAT 59.960 41.667 0.00 0.00 0.00 2.32
685 725 5.245075 GTCCTGACCCAAAATCCAACAAATA 59.755 40.000 0.00 0.00 0.00 1.40
687 727 6.014669 TCCTGACCCAAAATCCAACAAATAAG 60.015 38.462 0.00 0.00 0.00 1.73
689 729 7.039363 CCTGACCCAAAATCCAACAAATAAGTA 60.039 37.037 0.00 0.00 0.00 2.24
691 731 8.310382 TGACCCAAAATCCAACAAATAAGTATG 58.690 33.333 0.00 0.00 0.00 2.39
692 732 8.429237 ACCCAAAATCCAACAAATAAGTATGA 57.571 30.769 0.00 0.00 0.00 2.15
694 734 9.717942 CCCAAAATCCAACAAATAAGTATGAAA 57.282 29.630 0.00 0.00 0.00 2.69
740 780 4.976116 ACAAAACTAGAAATTGCAACTCGC 59.024 37.500 0.00 0.00 42.89 5.03
747 787 4.265073 AGAAATTGCAACTCGCTCCTAAT 58.735 39.130 0.00 0.00 43.06 1.73
811 868 2.835764 TCGGTCCTGCCTAACATACTTT 59.164 45.455 0.00 0.00 34.25 2.66
829 886 3.319122 ACTTTGCCAAGATCCAAGACAAC 59.681 43.478 4.25 0.00 33.72 3.32
872 929 4.603131 TGGGATGGAAGTAGTAGTAACGT 58.397 43.478 0.00 0.00 0.00 3.99
884 941 5.388408 AGTAGTAACGTTTCCTCTTGAGG 57.612 43.478 5.91 10.28 0.00 3.86
886 943 5.715753 AGTAGTAACGTTTCCTCTTGAGGAT 59.284 40.000 18.81 7.45 37.87 3.24
949 1006 3.591789 ACATACATACATGGCTCCTCCT 58.408 45.455 0.00 0.00 35.26 3.69
959 1016 4.824515 CTCCTCCTCGGGACCGCT 62.825 72.222 5.75 0.00 39.59 5.52
972 1029 3.592814 CCGCTGGACGAGCCGATA 61.593 66.667 3.66 0.00 46.01 2.92
977 1034 1.470979 GCTGGACGAGCCGATAAAGAA 60.471 52.381 0.00 0.00 42.54 2.52
1000 1057 0.250727 CCCTTTCCAGTTCCGAAGCA 60.251 55.000 0.00 0.00 0.00 3.91
1002 1059 1.740025 CCTTTCCAGTTCCGAAGCATC 59.260 52.381 0.00 0.00 0.00 3.91
1200 1260 4.373116 GCTCCTCAACGTGGGCGA 62.373 66.667 0.00 0.00 42.00 5.54
1201 1261 2.432628 CTCCTCAACGTGGGCGAC 60.433 66.667 0.00 0.00 42.00 5.19
1202 1262 3.220999 CTCCTCAACGTGGGCGACA 62.221 63.158 0.00 0.00 42.00 4.35
1203 1263 2.280524 CCTCAACGTGGGCGACAA 60.281 61.111 0.00 0.00 42.00 3.18
1204 1264 1.671054 CCTCAACGTGGGCGACAAT 60.671 57.895 0.00 0.00 42.00 2.71
1205 1265 1.635663 CCTCAACGTGGGCGACAATC 61.636 60.000 0.00 0.00 42.00 2.67
1206 1266 0.670546 CTCAACGTGGGCGACAATCT 60.671 55.000 0.00 0.00 42.00 2.40
1347 1416 4.143333 CGATGCCGACCGGTTCCT 62.143 66.667 9.42 0.00 38.22 3.36
1356 1425 2.391724 GACCGGTTCCTGTGGAGCAA 62.392 60.000 9.42 0.00 34.53 3.91
1357 1426 1.672356 CCGGTTCCTGTGGAGCAAG 60.672 63.158 0.00 0.00 34.53 4.01
1402 1471 1.409661 GGTTACCATTTCCAGCCGGAT 60.410 52.381 5.05 0.00 42.41 4.18
1422 1491 3.992943 TGGGAACTTCATGAACGGTAT 57.007 42.857 3.38 0.00 0.00 2.73
1423 1492 5.454187 GGATGGGAACTTCATGAACGGTATA 60.454 44.000 3.38 0.00 36.27 1.47
1424 1493 5.623956 TGGGAACTTCATGAACGGTATAT 57.376 39.130 3.38 0.00 0.00 0.86
1425 1494 6.734502 TGGGAACTTCATGAACGGTATATA 57.265 37.500 3.38 0.00 0.00 0.86
1430 1499 7.148573 GGAACTTCATGAACGGTATATATGCAG 60.149 40.741 3.38 1.34 0.00 4.41
1437 1511 6.090783 TGAACGGTATATATGCAGTCGATTC 58.909 40.000 7.02 2.71 0.00 2.52
1438 1512 4.995124 ACGGTATATATGCAGTCGATTCC 58.005 43.478 3.10 0.00 0.00 3.01
1439 1513 4.461431 ACGGTATATATGCAGTCGATTCCA 59.539 41.667 3.10 0.00 0.00 3.53
1448 1525 2.289002 GCAGTCGATTCCATCATTCCAC 59.711 50.000 0.00 0.00 0.00 4.02
1513 1590 7.537715 TGTTTGCATTACATGGTTTGATCTAG 58.462 34.615 0.00 0.00 0.00 2.43
1533 1611 6.323266 TCTAGTATCTTTCACACTTTCGCTC 58.677 40.000 0.00 0.00 0.00 5.03
1560 1638 2.697654 TGTTTGTTTGCTTGCTTGCTT 58.302 38.095 3.47 0.00 0.00 3.91
1561 1639 2.672381 TGTTTGTTTGCTTGCTTGCTTC 59.328 40.909 3.47 0.00 0.00 3.86
1562 1640 1.938625 TTGTTTGCTTGCTTGCTTCC 58.061 45.000 3.47 0.00 0.00 3.46
1563 1641 1.113788 TGTTTGCTTGCTTGCTTCCT 58.886 45.000 3.47 0.00 0.00 3.36
1564 1642 1.202440 TGTTTGCTTGCTTGCTTCCTG 60.202 47.619 3.47 0.00 0.00 3.86
1565 1643 0.390124 TTTGCTTGCTTGCTTCCTGG 59.610 50.000 3.47 0.00 0.00 4.45
1589 1667 6.089417 GGAAAACACAAACTGACTGTCTTTTG 59.911 38.462 22.74 22.74 28.83 2.44
1597 1675 1.677576 TGACTGTCTTTTGCTTGCTGG 59.322 47.619 9.51 0.00 0.00 4.85
1598 1676 0.386838 ACTGTCTTTTGCTTGCTGGC 59.613 50.000 0.00 0.00 0.00 4.85
1599 1677 0.662374 CTGTCTTTTGCTTGCTGGCG 60.662 55.000 0.00 0.00 34.52 5.69
1684 1767 3.692257 ACTACTTCATCACTTGCTGCT 57.308 42.857 0.00 0.00 0.00 4.24
1714 1847 7.254556 CCAGCTGTCTGTTTGTATGTATGTATG 60.255 40.741 13.81 0.00 38.66 2.39
1759 1970 9.097257 TGTATGTATGTATGTATGTATGCATGC 57.903 33.333 11.82 11.82 36.70 4.06
1800 2012 2.648059 ACTCAATAATGTGCAGCTCCC 58.352 47.619 0.00 0.00 0.00 4.30
1821 2033 4.039973 CCCATGTATTACCGTGGACTGTAT 59.960 45.833 13.90 0.00 43.04 2.29
1848 2060 6.043938 ACTTCTTCTACCAGTACAATCCCAAA 59.956 38.462 0.00 0.00 0.00 3.28
2005 2217 1.077501 CCCAATGGCACGGTCATCT 60.078 57.895 0.00 0.00 0.00 2.90
2365 2577 3.576356 CCATTAGCGGTGGCAGCG 61.576 66.667 32.48 32.48 43.41 5.18
2386 2598 3.252215 CGACTCATCAGAGGAGGTGATAC 59.748 52.174 16.35 0.69 46.44 2.24
2496 2708 2.671070 CCGGAAGCTGATGTGGGT 59.329 61.111 0.00 0.00 0.00 4.51
2718 3074 9.698617 CATTATGTTATTGTATCATGCATCTCG 57.301 33.333 0.00 0.00 0.00 4.04
2781 3198 6.572519 TCAATAGATCAACACATGTCGATCA 58.427 36.000 22.29 13.47 37.36 2.92
2891 3312 4.988540 GTCTGCTGTTACAGTACATGTCAA 59.011 41.667 14.23 0.00 42.70 3.18
3207 3807 1.227999 CCTTTCGCCTCAACGCTTCA 61.228 55.000 0.00 0.00 0.00 3.02
3249 3849 1.673033 GCCGATGTCAGCTACAACTGT 60.673 52.381 0.00 0.00 42.70 3.55
3438 4041 1.208614 CAAGGAACTGCTGAAGCGC 59.791 57.895 0.00 0.00 45.83 5.92
3676 4279 1.098050 GGCCTCAGCACCAATACAAG 58.902 55.000 0.00 0.00 42.56 3.16
3698 4301 4.658713 CATACCGTGATGCATGAGATTC 57.341 45.455 2.46 0.00 0.00 2.52
3734 4353 7.890127 TCCAATATGTTCTGGTTCTTTCAGATT 59.110 33.333 0.00 0.00 40.46 2.40
3784 4403 9.154847 CAGACATACATGAAATTGTTCTCAGTA 57.845 33.333 0.00 0.00 34.60 2.74
3795 4414 5.970317 TTGTTCTCAGTATTACCGTCTGA 57.030 39.130 0.00 0.00 36.85 3.27
3822 4441 8.015185 ACCTTTATGCAGCAGATTTGATTATT 57.985 30.769 0.00 0.00 0.00 1.40
3895 4514 0.726827 ACATATGTCCGTGCTTTGCG 59.273 50.000 1.41 0.00 0.00 4.85
3912 4531 2.432444 TGCGACGGGAGAAAAATTGAT 58.568 42.857 0.00 0.00 0.00 2.57
3984 4603 1.863662 CGACACAGGTGACGCTAGGT 61.864 60.000 10.87 0.00 41.06 3.08
4031 4650 3.636300 AGAAGTTTGTTGCAATAGTGGCA 59.364 39.130 0.59 0.00 40.00 4.92
4137 5192 2.843401 TACGGCTGTCCTTGCTTTAA 57.157 45.000 0.00 0.00 0.00 1.52
4139 5194 2.514803 ACGGCTGTCCTTGCTTTAATT 58.485 42.857 0.00 0.00 0.00 1.40
4146 5247 2.817844 GTCCTTGCTTTAATTGGACGGT 59.182 45.455 0.00 0.00 37.93 4.83
4166 5267 5.355071 ACGGTATTAAATTCCTTCGTTTCCC 59.645 40.000 0.00 0.00 0.00 3.97
4167 5268 5.354792 CGGTATTAAATTCCTTCGTTTCCCA 59.645 40.000 0.00 0.00 0.00 4.37
4168 5269 6.038936 CGGTATTAAATTCCTTCGTTTCCCAT 59.961 38.462 0.00 0.00 0.00 4.00
4169 5270 7.227116 CGGTATTAAATTCCTTCGTTTCCCATA 59.773 37.037 0.00 0.00 0.00 2.74
4170 5271 8.905850 GGTATTAAATTCCTTCGTTTCCCATAA 58.094 33.333 0.00 0.00 0.00 1.90
4171 5272 9.946165 GTATTAAATTCCTTCGTTTCCCATAAG 57.054 33.333 0.00 0.00 0.00 1.73
4172 5273 5.914898 AAATTCCTTCGTTTCCCATAAGG 57.085 39.130 0.00 0.00 39.93 2.69
4173 5274 2.413310 TCCTTCGTTTCCCATAAGGC 57.587 50.000 0.00 0.00 38.70 4.35
4174 5275 1.913419 TCCTTCGTTTCCCATAAGGCT 59.087 47.619 0.00 0.00 38.70 4.58
4175 5276 2.017049 CCTTCGTTTCCCATAAGGCTG 58.983 52.381 0.00 0.00 32.66 4.85
4176 5277 2.017049 CTTCGTTTCCCATAAGGCTGG 58.983 52.381 0.00 0.00 35.95 4.85
4177 5278 0.988832 TCGTTTCCCATAAGGCTGGT 59.011 50.000 0.00 0.00 34.23 4.00
4178 5279 1.065709 TCGTTTCCCATAAGGCTGGTC 60.066 52.381 0.00 0.00 34.23 4.02
4179 5280 1.339631 CGTTTCCCATAAGGCTGGTCA 60.340 52.381 0.00 0.00 34.23 4.02
4180 5281 2.683742 CGTTTCCCATAAGGCTGGTCAT 60.684 50.000 0.00 0.00 34.23 3.06
4181 5282 3.433031 CGTTTCCCATAAGGCTGGTCATA 60.433 47.826 0.00 0.00 34.23 2.15
4182 5283 4.532834 GTTTCCCATAAGGCTGGTCATAA 58.467 43.478 0.00 0.00 34.23 1.90
4183 5284 5.140454 GTTTCCCATAAGGCTGGTCATAAT 58.860 41.667 0.00 0.00 34.23 1.28
4184 5285 4.371624 TCCCATAAGGCTGGTCATAATG 57.628 45.455 0.00 0.00 34.23 1.90
4185 5286 3.074390 TCCCATAAGGCTGGTCATAATGG 59.926 47.826 0.00 0.00 34.23 3.16
4186 5287 3.074390 CCCATAAGGCTGGTCATAATGGA 59.926 47.826 0.00 0.00 34.23 3.41
4187 5288 4.330250 CCATAAGGCTGGTCATAATGGAG 58.670 47.826 0.00 0.00 0.00 3.86
4188 5289 4.202503 CCATAAGGCTGGTCATAATGGAGT 60.203 45.833 0.00 0.00 0.00 3.85
4189 5290 3.287867 AAGGCTGGTCATAATGGAGTG 57.712 47.619 0.00 0.00 0.00 3.51
4190 5291 2.200081 AGGCTGGTCATAATGGAGTGT 58.800 47.619 0.00 0.00 0.00 3.55
4191 5292 3.384168 AGGCTGGTCATAATGGAGTGTA 58.616 45.455 0.00 0.00 0.00 2.90
4192 5293 3.780294 AGGCTGGTCATAATGGAGTGTAA 59.220 43.478 0.00 0.00 0.00 2.41
4193 5294 3.877508 GGCTGGTCATAATGGAGTGTAAC 59.122 47.826 0.00 0.00 0.00 2.50
4299 5400 9.686683 ATGGCTTTATTTAATGACTTGTAGACT 57.313 29.630 0.00 0.00 0.00 3.24
4300 5401 9.162764 TGGCTTTATTTAATGACTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
4301 5402 9.162764 GGCTTTATTTAATGACTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
4313 5414 8.792633 TGACTTGTAGACTCATTTTATTTTGGG 58.207 33.333 0.00 0.00 0.00 4.12
4314 5415 8.934023 ACTTGTAGACTCATTTTATTTTGGGA 57.066 30.769 0.00 0.00 0.00 4.37
4315 5416 9.362151 ACTTGTAGACTCATTTTATTTTGGGAA 57.638 29.630 0.00 0.00 0.00 3.97
4318 5419 8.748412 TGTAGACTCATTTTATTTTGGGAATGG 58.252 33.333 0.00 0.00 31.97 3.16
4319 5420 6.643388 AGACTCATTTTATTTTGGGAATGGC 58.357 36.000 0.00 0.00 31.97 4.40
4320 5421 6.441604 AGACTCATTTTATTTTGGGAATGGCT 59.558 34.615 0.00 0.00 31.97 4.75
4321 5422 7.619302 AGACTCATTTTATTTTGGGAATGGCTA 59.381 33.333 0.00 0.00 31.97 3.93
4322 5423 8.322905 ACTCATTTTATTTTGGGAATGGCTAT 57.677 30.769 0.00 0.00 31.97 2.97
4323 5424 8.206189 ACTCATTTTATTTTGGGAATGGCTATG 58.794 33.333 0.00 0.00 31.97 2.23
4324 5425 8.088463 TCATTTTATTTTGGGAATGGCTATGT 57.912 30.769 0.00 0.00 31.97 2.29
4325 5426 8.547173 TCATTTTATTTTGGGAATGGCTATGTT 58.453 29.630 0.00 0.00 31.97 2.71
4326 5427 9.829507 CATTTTATTTTGGGAATGGCTATGTTA 57.170 29.630 0.00 0.00 0.00 2.41
4327 5428 9.830975 ATTTTATTTTGGGAATGGCTATGTTAC 57.169 29.630 0.00 0.00 0.00 2.50
4328 5429 7.962995 TTATTTTGGGAATGGCTATGTTACA 57.037 32.000 0.00 0.00 0.00 2.41
4329 5430 5.913137 TTTTGGGAATGGCTATGTTACAG 57.087 39.130 0.00 0.00 0.00 2.74
4330 5431 4.584638 TTGGGAATGGCTATGTTACAGT 57.415 40.909 0.00 0.00 0.00 3.55
4331 5432 5.702065 TTGGGAATGGCTATGTTACAGTA 57.298 39.130 0.00 0.00 0.00 2.74
4332 5433 5.702065 TGGGAATGGCTATGTTACAGTAA 57.298 39.130 0.00 0.00 0.00 2.24
4333 5434 6.260700 TGGGAATGGCTATGTTACAGTAAT 57.739 37.500 0.00 0.00 0.00 1.89
4334 5435 7.381789 TGGGAATGGCTATGTTACAGTAATA 57.618 36.000 0.00 0.00 0.00 0.98
4335 5436 7.984475 TGGGAATGGCTATGTTACAGTAATAT 58.016 34.615 7.62 7.62 0.00 1.28
4336 5437 9.106977 TGGGAATGGCTATGTTACAGTAATATA 57.893 33.333 8.91 8.91 0.00 0.86
4365 5466 8.771920 TGTTACCACTTCTCATTAACTACATG 57.228 34.615 0.00 0.00 0.00 3.21
4366 5467 7.333423 TGTTACCACTTCTCATTAACTACATGC 59.667 37.037 0.00 0.00 0.00 4.06
4367 5468 5.186198 ACCACTTCTCATTAACTACATGCC 58.814 41.667 0.00 0.00 0.00 4.40
4368 5469 5.185454 CCACTTCTCATTAACTACATGCCA 58.815 41.667 0.00 0.00 0.00 4.92
4369 5470 5.824624 CCACTTCTCATTAACTACATGCCAT 59.175 40.000 0.00 0.00 0.00 4.40
4370 5471 6.992123 CCACTTCTCATTAACTACATGCCATA 59.008 38.462 0.00 0.00 0.00 2.74
4371 5472 7.663081 CCACTTCTCATTAACTACATGCCATAT 59.337 37.037 0.00 0.00 0.00 1.78
4372 5473 9.710900 CACTTCTCATTAACTACATGCCATATA 57.289 33.333 0.00 0.00 0.00 0.86
4375 5476 8.777865 TCTCATTAACTACATGCCATATAAGC 57.222 34.615 0.00 0.00 0.00 3.09
4376 5477 8.374743 TCTCATTAACTACATGCCATATAAGCA 58.625 33.333 3.54 3.54 45.94 3.91
4377 5478 8.916628 TCATTAACTACATGCCATATAAGCAA 57.083 30.769 5.05 0.00 44.83 3.91
4378 5479 9.348476 TCATTAACTACATGCCATATAAGCAAA 57.652 29.630 5.05 0.00 44.83 3.68
4379 5480 9.964303 CATTAACTACATGCCATATAAGCAAAA 57.036 29.630 5.05 0.00 44.83 2.44
4383 5484 9.889128 AACTACATGCCATATAAGCAAAAATTT 57.111 25.926 5.05 0.00 44.83 1.82
4384 5485 9.533253 ACTACATGCCATATAAGCAAAAATTTC 57.467 29.630 5.05 0.00 44.83 2.17
4385 5486 9.754382 CTACATGCCATATAAGCAAAAATTTCT 57.246 29.630 5.05 0.00 44.83 2.52
4386 5487 8.652810 ACATGCCATATAAGCAAAAATTTCTC 57.347 30.769 5.05 0.00 44.83 2.87
4387 5488 8.259411 ACATGCCATATAAGCAAAAATTTCTCA 58.741 29.630 5.05 0.00 44.83 3.27
4388 5489 9.100554 CATGCCATATAAGCAAAAATTTCTCAA 57.899 29.630 5.05 0.00 44.83 3.02
4389 5490 9.669887 ATGCCATATAAGCAAAAATTTCTCAAA 57.330 25.926 5.05 0.00 44.83 2.69
4390 5491 9.499479 TGCCATATAAGCAAAAATTTCTCAAAA 57.501 25.926 0.00 0.00 37.28 2.44
4407 5508 7.539712 TCTCAAAATGTACTATGTTAGCAGC 57.460 36.000 0.00 0.00 0.00 5.25
4408 5509 7.331026 TCTCAAAATGTACTATGTTAGCAGCT 58.669 34.615 0.00 0.00 0.00 4.24
4409 5510 8.474831 TCTCAAAATGTACTATGTTAGCAGCTA 58.525 33.333 0.00 0.00 0.00 3.32
4410 5511 9.098355 CTCAAAATGTACTATGTTAGCAGCTAA 57.902 33.333 11.07 11.07 0.00 3.09
4411 5512 9.098355 TCAAAATGTACTATGTTAGCAGCTAAG 57.902 33.333 15.55 6.22 0.00 2.18
4412 5513 8.883731 CAAAATGTACTATGTTAGCAGCTAAGT 58.116 33.333 15.55 11.86 0.00 2.24
4413 5514 9.449719 AAAATGTACTATGTTAGCAGCTAAGTT 57.550 29.630 15.55 8.36 0.00 2.66
4415 5516 9.530633 AATGTACTATGTTAGCAGCTAAGTTAC 57.469 33.333 15.55 11.75 0.00 2.50
4416 5517 8.289939 TGTACTATGTTAGCAGCTAAGTTACT 57.710 34.615 15.55 1.52 0.00 2.24
4417 5518 8.404000 TGTACTATGTTAGCAGCTAAGTTACTC 58.596 37.037 15.55 3.35 0.00 2.59
4418 5519 6.807789 ACTATGTTAGCAGCTAAGTTACTCC 58.192 40.000 15.55 2.64 0.00 3.85
4419 5520 4.467198 TGTTAGCAGCTAAGTTACTCCC 57.533 45.455 15.55 1.92 0.00 4.30
4420 5521 3.835978 TGTTAGCAGCTAAGTTACTCCCA 59.164 43.478 15.55 4.57 0.00 4.37
4421 5522 4.182339 GTTAGCAGCTAAGTTACTCCCAC 58.818 47.826 15.55 0.00 0.00 4.61
4422 5523 2.541466 AGCAGCTAAGTTACTCCCACT 58.459 47.619 0.00 0.00 0.00 4.00
4423 5524 3.709587 AGCAGCTAAGTTACTCCCACTA 58.290 45.455 0.00 0.00 0.00 2.74
4424 5525 4.290942 AGCAGCTAAGTTACTCCCACTAT 58.709 43.478 0.00 0.00 0.00 2.12
4425 5526 4.100189 AGCAGCTAAGTTACTCCCACTATG 59.900 45.833 0.00 0.00 0.00 2.23
4426 5527 4.099573 GCAGCTAAGTTACTCCCACTATGA 59.900 45.833 0.00 0.00 0.00 2.15
4427 5528 5.593010 CAGCTAAGTTACTCCCACTATGAC 58.407 45.833 0.00 0.00 0.00 3.06
4428 5529 5.361285 CAGCTAAGTTACTCCCACTATGACT 59.639 44.000 0.00 0.00 0.00 3.41
4429 5530 6.546403 CAGCTAAGTTACTCCCACTATGACTA 59.454 42.308 0.00 0.00 0.00 2.59
4430 5531 6.773685 AGCTAAGTTACTCCCACTATGACTAG 59.226 42.308 0.00 0.00 0.00 2.57
4431 5532 6.546772 GCTAAGTTACTCCCACTATGACTAGT 59.453 42.308 0.00 0.00 38.79 2.57
4432 5533 7.255208 GCTAAGTTACTCCCACTATGACTAGTC 60.255 44.444 16.32 16.32 35.99 2.59
4475 5599 6.260493 CCTCAATCTTTCTCAGGCAGATAAAG 59.740 42.308 10.32 10.32 40.12 1.85
4478 5602 4.748892 TCTTTCTCAGGCAGATAAAGTCG 58.251 43.478 14.44 0.00 39.87 4.18
4535 5660 5.128827 CCTCACCCTGCATTTCTTAGTACTA 59.871 44.000 0.00 0.00 0.00 1.82
4536 5661 5.974108 TCACCCTGCATTTCTTAGTACTAC 58.026 41.667 0.91 0.00 0.00 2.73
4537 5662 5.720041 TCACCCTGCATTTCTTAGTACTACT 59.280 40.000 0.91 0.00 0.00 2.57
4538 5663 6.212791 TCACCCTGCATTTCTTAGTACTACTT 59.787 38.462 0.91 0.00 0.00 2.24
4540 5665 6.212791 ACCCTGCATTTCTTAGTACTACTTGA 59.787 38.462 0.91 0.00 0.00 3.02
4542 5667 6.758886 CCTGCATTTCTTAGTACTACTTGAGG 59.241 42.308 0.91 0.00 0.00 3.86
4543 5668 6.106673 TGCATTTCTTAGTACTACTTGAGGC 58.893 40.000 0.91 3.97 0.00 4.70
4544 5669 5.232414 GCATTTCTTAGTACTACTTGAGGCG 59.768 44.000 0.91 0.00 0.00 5.52
4545 5670 4.978083 TTCTTAGTACTACTTGAGGCGG 57.022 45.455 0.91 0.00 0.00 6.13
4546 5671 2.686915 TCTTAGTACTACTTGAGGCGGC 59.313 50.000 0.91 0.00 0.00 6.53
4547 5672 2.431954 TAGTACTACTTGAGGCGGCT 57.568 50.000 13.09 13.09 0.00 5.52
4548 5673 1.104630 AGTACTACTTGAGGCGGCTC 58.895 55.000 30.53 30.53 0.00 4.70
4549 5674 0.102663 GTACTACTTGAGGCGGCTCC 59.897 60.000 33.19 17.40 0.00 4.70
4571 5696 4.221262 CCTTGATTGCTCCTTGATTTTCCA 59.779 41.667 0.00 0.00 0.00 3.53
4579 5704 4.279420 GCTCCTTGATTTTCCAGACAACTT 59.721 41.667 0.00 0.00 0.00 2.66
4586 5711 5.465390 TGATTTTCCAGACAACTTACAGACG 59.535 40.000 0.00 0.00 0.00 4.18
4596 5721 8.744011 CAGACAACTTACAGACGTATATAAAGC 58.256 37.037 0.00 0.00 0.00 3.51
4597 5722 8.464404 AGACAACTTACAGACGTATATAAAGCA 58.536 33.333 0.00 0.00 0.00 3.91
4609 5734 9.257651 GACGTATATAAAGCAGTAGGATTTGTT 57.742 33.333 0.00 0.00 35.54 2.83
4611 5736 8.495949 CGTATATAAAGCAGTAGGATTTGTTGG 58.504 37.037 0.00 0.00 35.54 3.77
4618 5743 4.522789 GCAGTAGGATTTGTTGGAAAGGAA 59.477 41.667 0.00 0.00 0.00 3.36
4619 5744 5.564848 GCAGTAGGATTTGTTGGAAAGGAAC 60.565 44.000 0.00 0.00 0.00 3.62
4624 5749 2.131776 TTGTTGGAAAGGAACGGTGT 57.868 45.000 0.00 0.00 0.00 4.16
4645 5770 7.362574 CGGTGTGGGACTATTCAATTGTTAAAT 60.363 37.037 5.13 0.81 0.00 1.40
4651 5776 9.450807 GGGACTATTCAATTGTTAAATGAATCG 57.549 33.333 5.13 5.58 31.65 3.34
4668 5793 6.567687 TGAATCGTTCATACCAACACAAAT 57.432 33.333 0.00 0.00 34.08 2.32
4675 5800 6.183359 CGTTCATACCAACACAAATAAAAGCG 60.183 38.462 0.00 0.00 0.00 4.68
4676 5801 6.561737 TCATACCAACACAAATAAAAGCGA 57.438 33.333 0.00 0.00 0.00 4.93
4677 5802 6.971602 TCATACCAACACAAATAAAAGCGAA 58.028 32.000 0.00 0.00 0.00 4.70
4678 5803 7.426410 TCATACCAACACAAATAAAAGCGAAA 58.574 30.769 0.00 0.00 0.00 3.46
4679 5804 7.921214 TCATACCAACACAAATAAAAGCGAAAA 59.079 29.630 0.00 0.00 0.00 2.29
4680 5805 8.707839 CATACCAACACAAATAAAAGCGAAAAT 58.292 29.630 0.00 0.00 0.00 1.82
4681 5806 6.942891 ACCAACACAAATAAAAGCGAAAATG 58.057 32.000 0.00 0.00 0.00 2.32
4682 5807 6.536941 ACCAACACAAATAAAAGCGAAAATGT 59.463 30.769 0.00 0.00 0.00 2.71
4683 5808 7.065204 ACCAACACAAATAAAAGCGAAAATGTT 59.935 29.630 0.00 0.00 0.00 2.71
4684 5809 8.543774 CCAACACAAATAAAAGCGAAAATGTTA 58.456 29.630 0.00 0.00 0.00 2.41
4685 5810 9.907576 CAACACAAATAAAAGCGAAAATGTTAA 57.092 25.926 0.00 0.00 0.00 2.01
4686 5811 9.909043 AACACAAATAAAAGCGAAAATGTTAAC 57.091 25.926 0.00 0.00 0.00 2.01
4687 5812 8.263269 ACACAAATAAAAGCGAAAATGTTAACG 58.737 29.630 0.26 0.00 0.00 3.18
4691 5816 3.777016 GCGAAAATGTTAACGCCCA 57.223 47.368 0.26 0.00 44.27 5.36
4692 5817 1.333115 GCGAAAATGTTAACGCCCAC 58.667 50.000 0.26 0.00 44.27 4.61
4693 5818 1.335142 GCGAAAATGTTAACGCCCACA 60.335 47.619 0.26 0.00 44.27 4.17
4694 5819 2.312348 CGAAAATGTTAACGCCCACAC 58.688 47.619 0.26 0.00 0.00 3.82
4695 5820 2.312348 GAAAATGTTAACGCCCACACG 58.688 47.619 0.26 0.00 39.50 4.49
4707 5832 2.024022 CACACGTGTGGGCGTTTG 59.976 61.111 35.65 12.14 43.83 2.93
4708 5833 3.883180 ACACGTGTGGGCGTTTGC 61.883 61.111 22.71 0.00 43.83 3.68
4718 5843 2.251371 GCGTTTGCCAACTCGTCC 59.749 61.111 0.00 0.00 33.98 4.79
4719 5844 2.539338 GCGTTTGCCAACTCGTCCA 61.539 57.895 0.00 0.00 33.98 4.02
4720 5845 1.278637 CGTTTGCCAACTCGTCCAC 59.721 57.895 0.00 0.00 0.00 4.02
4721 5846 1.433053 CGTTTGCCAACTCGTCCACA 61.433 55.000 0.00 0.00 0.00 4.17
4722 5847 0.028902 GTTTGCCAACTCGTCCACAC 59.971 55.000 0.00 0.00 0.00 3.82
4724 5849 3.712881 GCCAACTCGTCCACACGC 61.713 66.667 0.00 0.00 46.28 5.34
4725 5850 3.041940 CCAACTCGTCCACACGCC 61.042 66.667 0.00 0.00 46.28 5.68
4726 5851 2.029073 CAACTCGTCCACACGCCT 59.971 61.111 0.00 0.00 46.28 5.52
4727 5852 1.594293 CAACTCGTCCACACGCCTT 60.594 57.895 0.00 0.00 46.28 4.35
4728 5853 1.300697 AACTCGTCCACACGCCTTC 60.301 57.895 0.00 0.00 46.28 3.46
4729 5854 2.023414 AACTCGTCCACACGCCTTCA 62.023 55.000 0.00 0.00 46.28 3.02
4730 5855 1.079819 CTCGTCCACACGCCTTCAT 60.080 57.895 0.00 0.00 46.28 2.57
4731 5856 1.078759 CTCGTCCACACGCCTTCATC 61.079 60.000 0.00 0.00 46.28 2.92
4732 5857 1.374125 CGTCCACACGCCTTCATCA 60.374 57.895 0.00 0.00 39.69 3.07
4733 5858 1.626654 CGTCCACACGCCTTCATCAC 61.627 60.000 0.00 0.00 39.69 3.06
4734 5859 1.003839 TCCACACGCCTTCATCACC 60.004 57.895 0.00 0.00 0.00 4.02
4735 5860 2.390599 CCACACGCCTTCATCACCG 61.391 63.158 0.00 0.00 0.00 4.94
4736 5861 1.667830 CACACGCCTTCATCACCGT 60.668 57.895 0.00 0.00 0.00 4.83
4737 5862 1.070786 ACACGCCTTCATCACCGTT 59.929 52.632 0.00 0.00 0.00 4.44
4738 5863 0.949105 ACACGCCTTCATCACCGTTC 60.949 55.000 0.00 0.00 0.00 3.95
4739 5864 0.948623 CACGCCTTCATCACCGTTCA 60.949 55.000 0.00 0.00 0.00 3.18
4740 5865 0.670546 ACGCCTTCATCACCGTTCAG 60.671 55.000 0.00 0.00 0.00 3.02
4741 5866 0.389817 CGCCTTCATCACCGTTCAGA 60.390 55.000 0.00 0.00 0.00 3.27
4742 5867 1.079503 GCCTTCATCACCGTTCAGAC 58.920 55.000 0.00 0.00 0.00 3.51
4743 5868 1.338200 GCCTTCATCACCGTTCAGACT 60.338 52.381 0.00 0.00 0.00 3.24
4744 5869 2.872038 GCCTTCATCACCGTTCAGACTT 60.872 50.000 0.00 0.00 0.00 3.01
4745 5870 2.996621 CCTTCATCACCGTTCAGACTTC 59.003 50.000 0.00 0.00 0.00 3.01
4746 5871 3.306364 CCTTCATCACCGTTCAGACTTCT 60.306 47.826 0.00 0.00 0.00 2.85
4747 5872 4.082190 CCTTCATCACCGTTCAGACTTCTA 60.082 45.833 0.00 0.00 0.00 2.10
4748 5873 5.394663 CCTTCATCACCGTTCAGACTTCTAT 60.395 44.000 0.00 0.00 0.00 1.98
4749 5874 6.183360 CCTTCATCACCGTTCAGACTTCTATA 60.183 42.308 0.00 0.00 0.00 1.31
4750 5875 6.132791 TCATCACCGTTCAGACTTCTATAC 57.867 41.667 0.00 0.00 0.00 1.47
4751 5876 4.611310 TCACCGTTCAGACTTCTATACG 57.389 45.455 5.69 5.69 34.10 3.06
4752 5877 4.256110 TCACCGTTCAGACTTCTATACGA 58.744 43.478 11.73 0.00 35.38 3.43
4753 5878 4.696877 TCACCGTTCAGACTTCTATACGAA 59.303 41.667 11.73 0.00 35.38 3.85
4754 5879 5.356190 TCACCGTTCAGACTTCTATACGAAT 59.644 40.000 11.73 1.05 35.38 3.34
4755 5880 5.681982 CACCGTTCAGACTTCTATACGAATC 59.318 44.000 11.73 0.00 35.38 2.52
4756 5881 5.589452 ACCGTTCAGACTTCTATACGAATCT 59.411 40.000 11.73 0.00 35.38 2.40
4757 5882 6.095160 ACCGTTCAGACTTCTATACGAATCTT 59.905 38.462 11.73 0.00 35.38 2.40
4758 5883 6.415280 CCGTTCAGACTTCTATACGAATCTTG 59.585 42.308 11.73 0.00 35.38 3.02
4759 5884 6.415280 CGTTCAGACTTCTATACGAATCTTGG 59.585 42.308 6.50 0.00 35.38 3.61
4760 5885 5.833082 TCAGACTTCTATACGAATCTTGGC 58.167 41.667 0.00 0.00 0.00 4.52
4761 5886 5.359860 TCAGACTTCTATACGAATCTTGGCA 59.640 40.000 0.00 0.00 0.00 4.92
4762 5887 6.040955 TCAGACTTCTATACGAATCTTGGCAT 59.959 38.462 0.00 0.00 0.00 4.40
4763 5888 6.145209 CAGACTTCTATACGAATCTTGGCATG 59.855 42.308 0.00 0.00 0.00 4.06
4764 5889 6.040955 AGACTTCTATACGAATCTTGGCATGA 59.959 38.462 5.47 5.47 0.00 3.07
4765 5890 6.582636 ACTTCTATACGAATCTTGGCATGAA 58.417 36.000 7.20 0.00 0.00 2.57
4766 5891 7.220030 ACTTCTATACGAATCTTGGCATGAAT 58.780 34.615 7.20 0.00 0.00 2.57
4767 5892 7.716998 ACTTCTATACGAATCTTGGCATGAATT 59.283 33.333 7.20 3.05 0.00 2.17
4768 5893 9.208022 CTTCTATACGAATCTTGGCATGAATTA 57.792 33.333 7.20 0.00 0.00 1.40
4769 5894 8.763049 TCTATACGAATCTTGGCATGAATTAG 57.237 34.615 7.20 5.87 0.00 1.73
4770 5895 4.558538 ACGAATCTTGGCATGAATTAGC 57.441 40.909 7.20 0.00 0.00 3.09
4771 5896 4.202441 ACGAATCTTGGCATGAATTAGCT 58.798 39.130 7.20 0.00 0.00 3.32
4772 5897 4.036027 ACGAATCTTGGCATGAATTAGCTG 59.964 41.667 7.20 0.00 0.00 4.24
4773 5898 4.274214 CGAATCTTGGCATGAATTAGCTGA 59.726 41.667 7.20 0.00 0.00 4.26
4774 5899 5.048921 CGAATCTTGGCATGAATTAGCTGAT 60.049 40.000 7.20 0.00 0.00 2.90
4775 5900 6.514541 CGAATCTTGGCATGAATTAGCTGATT 60.515 38.462 2.91 2.91 32.61 2.57
4776 5901 6.726490 ATCTTGGCATGAATTAGCTGATTT 57.274 33.333 5.07 0.00 0.00 2.17
4777 5902 6.534475 TCTTGGCATGAATTAGCTGATTTT 57.466 33.333 5.07 0.00 0.00 1.82
4778 5903 6.334989 TCTTGGCATGAATTAGCTGATTTTG 58.665 36.000 5.07 7.74 0.00 2.44
4779 5904 5.664294 TGGCATGAATTAGCTGATTTTGT 57.336 34.783 5.07 0.00 0.00 2.83
4780 5905 6.772360 TGGCATGAATTAGCTGATTTTGTA 57.228 33.333 5.07 0.00 0.00 2.41
4781 5906 7.350744 TGGCATGAATTAGCTGATTTTGTAT 57.649 32.000 5.07 0.00 0.00 2.29
4782 5907 7.204604 TGGCATGAATTAGCTGATTTTGTATG 58.795 34.615 5.07 9.00 0.00 2.39
4783 5908 6.145048 GGCATGAATTAGCTGATTTTGTATGC 59.855 38.462 21.65 21.65 36.30 3.14
4784 5909 6.145048 GCATGAATTAGCTGATTTTGTATGCC 59.855 38.462 20.43 10.99 32.26 4.40
4785 5910 6.772360 TGAATTAGCTGATTTTGTATGCCA 57.228 33.333 5.07 0.00 0.00 4.92
4786 5911 6.563422 TGAATTAGCTGATTTTGTATGCCAC 58.437 36.000 5.07 0.00 0.00 5.01
4787 5912 4.614555 TTAGCTGATTTTGTATGCCACG 57.385 40.909 0.00 0.00 0.00 4.94
4788 5913 2.436417 AGCTGATTTTGTATGCCACGT 58.564 42.857 0.00 0.00 0.00 4.49
4789 5914 3.605634 AGCTGATTTTGTATGCCACGTA 58.394 40.909 0.00 0.00 0.00 3.57
4790 5915 3.623060 AGCTGATTTTGTATGCCACGTAG 59.377 43.478 0.00 0.00 0.00 3.51
4791 5916 3.242739 GCTGATTTTGTATGCCACGTAGG 60.243 47.826 0.00 0.00 41.84 3.18
4792 5917 4.188462 CTGATTTTGTATGCCACGTAGGA 58.812 43.478 8.04 0.00 41.22 2.94
4793 5918 3.936453 TGATTTTGTATGCCACGTAGGAC 59.064 43.478 8.04 0.00 41.22 3.85
4794 5919 3.404224 TTTTGTATGCCACGTAGGACA 57.596 42.857 8.04 6.08 41.22 4.02
4795 5920 3.404224 TTTGTATGCCACGTAGGACAA 57.596 42.857 8.04 6.87 41.22 3.18
4796 5921 2.373540 TGTATGCCACGTAGGACAAC 57.626 50.000 8.04 0.00 41.22 3.32
4797 5922 1.897133 TGTATGCCACGTAGGACAACT 59.103 47.619 8.04 0.00 41.22 3.16
4798 5923 2.094390 TGTATGCCACGTAGGACAACTC 60.094 50.000 8.04 3.04 41.22 3.01
4799 5924 0.108804 ATGCCACGTAGGACAACTCG 60.109 55.000 8.04 0.00 41.22 4.18
4800 5925 1.288127 GCCACGTAGGACAACTCGT 59.712 57.895 8.04 0.00 41.22 4.18
4801 5926 1.007336 GCCACGTAGGACAACTCGTG 61.007 60.000 8.04 9.13 43.70 4.35
4802 5927 0.313043 CCACGTAGGACAACTCGTGT 59.687 55.000 13.75 0.00 43.14 4.49
4803 5928 1.405461 CACGTAGGACAACTCGTGTG 58.595 55.000 8.11 0.00 41.96 3.82
4804 5929 1.027357 ACGTAGGACAACTCGTGTGT 58.973 50.000 0.00 0.00 41.96 3.72
4805 5930 1.268896 ACGTAGGACAACTCGTGTGTG 60.269 52.381 0.00 0.00 41.96 3.82
4806 5931 1.268896 CGTAGGACAACTCGTGTGTGT 60.269 52.381 0.00 0.00 41.96 3.72
4807 5932 2.124903 GTAGGACAACTCGTGTGTGTG 58.875 52.381 9.18 0.00 41.96 3.82
4808 5933 0.179084 AGGACAACTCGTGTGTGTGG 60.179 55.000 9.18 0.00 41.96 4.17
4809 5934 0.461339 GGACAACTCGTGTGTGTGGT 60.461 55.000 9.18 0.00 41.96 4.16
4810 5935 0.650512 GACAACTCGTGTGTGTGGTG 59.349 55.000 9.18 0.00 41.96 4.17
4811 5936 0.036765 ACAACTCGTGTGTGTGGTGT 60.037 50.000 0.00 0.00 39.72 4.16
4812 5937 0.373370 CAACTCGTGTGTGTGGTGTG 59.627 55.000 0.00 0.00 0.00 3.82
4813 5938 0.036765 AACTCGTGTGTGTGGTGTGT 60.037 50.000 0.00 0.00 0.00 3.72
4814 5939 0.739462 ACTCGTGTGTGTGGTGTGTG 60.739 55.000 0.00 0.00 0.00 3.82
4815 5940 0.459411 CTCGTGTGTGTGGTGTGTGA 60.459 55.000 0.00 0.00 0.00 3.58
4816 5941 0.459411 TCGTGTGTGTGGTGTGTGAG 60.459 55.000 0.00 0.00 0.00 3.51
4817 5942 0.459411 CGTGTGTGTGGTGTGTGAGA 60.459 55.000 0.00 0.00 0.00 3.27
4818 5943 1.290203 GTGTGTGTGGTGTGTGAGAG 58.710 55.000 0.00 0.00 0.00 3.20
4819 5944 1.134818 GTGTGTGTGGTGTGTGAGAGA 60.135 52.381 0.00 0.00 0.00 3.10
4820 5945 1.136891 TGTGTGTGGTGTGTGAGAGAG 59.863 52.381 0.00 0.00 0.00 3.20
4821 5946 0.752658 TGTGTGGTGTGTGAGAGAGG 59.247 55.000 0.00 0.00 0.00 3.69
4822 5947 0.753262 GTGTGGTGTGTGAGAGAGGT 59.247 55.000 0.00 0.00 0.00 3.85
4823 5948 1.040646 TGTGGTGTGTGAGAGAGGTC 58.959 55.000 0.00 0.00 0.00 3.85
4824 5949 0.039074 GTGGTGTGTGAGAGAGGTCG 60.039 60.000 0.00 0.00 0.00 4.79
4825 5950 0.467474 TGGTGTGTGAGAGAGGTCGT 60.467 55.000 0.00 0.00 0.00 4.34
4826 5951 0.674534 GGTGTGTGAGAGAGGTCGTT 59.325 55.000 0.00 0.00 0.00 3.85
4827 5952 1.336056 GGTGTGTGAGAGAGGTCGTTC 60.336 57.143 0.00 0.00 0.00 3.95
4828 5953 1.337071 GTGTGTGAGAGAGGTCGTTCA 59.663 52.381 0.00 0.00 0.00 3.18
4829 5954 1.337071 TGTGTGAGAGAGGTCGTTCAC 59.663 52.381 8.91 8.91 40.17 3.18
4830 5955 1.337071 GTGTGAGAGAGGTCGTTCACA 59.663 52.381 12.63 12.63 45.37 3.58
4831 5956 1.337071 TGTGAGAGAGGTCGTTCACAC 59.663 52.381 12.63 0.00 43.43 3.82
4832 5957 1.337071 GTGAGAGAGGTCGTTCACACA 59.663 52.381 10.28 0.00 39.67 3.72
4833 5958 2.029828 GTGAGAGAGGTCGTTCACACAT 60.030 50.000 10.28 0.00 39.67 3.21
4834 5959 2.229062 TGAGAGAGGTCGTTCACACATC 59.771 50.000 0.00 0.00 0.00 3.06
4835 5960 1.546476 AGAGAGGTCGTTCACACATCC 59.454 52.381 0.00 0.00 0.00 3.51
4836 5961 1.546476 GAGAGGTCGTTCACACATCCT 59.454 52.381 0.00 0.00 0.00 3.24
4837 5962 1.971357 AGAGGTCGTTCACACATCCTT 59.029 47.619 0.00 0.00 0.00 3.36
4838 5963 2.368875 AGAGGTCGTTCACACATCCTTT 59.631 45.455 0.00 0.00 0.00 3.11
4839 5964 3.139077 GAGGTCGTTCACACATCCTTTT 58.861 45.455 0.00 0.00 0.00 2.27
4840 5965 3.551846 AGGTCGTTCACACATCCTTTTT 58.448 40.909 0.00 0.00 0.00 1.94
4841 5966 4.710324 AGGTCGTTCACACATCCTTTTTA 58.290 39.130 0.00 0.00 0.00 1.52
4842 5967 4.514066 AGGTCGTTCACACATCCTTTTTAC 59.486 41.667 0.00 0.00 0.00 2.01
4843 5968 4.319984 GGTCGTTCACACATCCTTTTTACC 60.320 45.833 0.00 0.00 0.00 2.85
4844 5969 4.273969 GTCGTTCACACATCCTTTTTACCA 59.726 41.667 0.00 0.00 0.00 3.25
4845 5970 4.273969 TCGTTCACACATCCTTTTTACCAC 59.726 41.667 0.00 0.00 0.00 4.16
4846 5971 4.035792 CGTTCACACATCCTTTTTACCACA 59.964 41.667 0.00 0.00 0.00 4.17
4847 5972 5.278604 GTTCACACATCCTTTTTACCACAC 58.721 41.667 0.00 0.00 0.00 3.82
4848 5973 4.527944 TCACACATCCTTTTTACCACACA 58.472 39.130 0.00 0.00 0.00 3.72
4849 5974 4.578516 TCACACATCCTTTTTACCACACAG 59.421 41.667 0.00 0.00 0.00 3.66
4850 5975 4.578516 CACACATCCTTTTTACCACACAGA 59.421 41.667 0.00 0.00 0.00 3.41
4851 5976 4.821805 ACACATCCTTTTTACCACACAGAG 59.178 41.667 0.00 0.00 0.00 3.35
4852 5977 4.216257 CACATCCTTTTTACCACACAGAGG 59.784 45.833 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 7.377662 CGACAACGCTTATACACATATAGACAA 59.622 37.037 0.00 0.00 0.00 3.18
122 123 5.182190 CACGAGAGCCACTGATATATAGTGT 59.818 44.000 14.91 2.20 43.05 3.55
176 177 3.751698 GCGAACCATGGAGTAAAGTTCTT 59.248 43.478 21.47 0.00 35.73 2.52
195 196 4.373116 GTGGTTCCAGCCTCGCGA 62.373 66.667 9.26 9.26 0.00 5.87
227 229 4.344978 AGAGTAATATGATAGGCTCGCCA 58.655 43.478 11.02 0.00 38.92 5.69
280 282 9.717942 GGATGCAAACAAAGTAGATAGATAGAT 57.282 33.333 0.00 0.00 0.00 1.98
281 283 8.928448 AGGATGCAAACAAAGTAGATAGATAGA 58.072 33.333 0.00 0.00 0.00 1.98
282 284 9.553064 AAGGATGCAAACAAAGTAGATAGATAG 57.447 33.333 0.00 0.00 0.00 2.08
284 286 9.553064 CTAAGGATGCAAACAAAGTAGATAGAT 57.447 33.333 0.00 0.00 0.00 1.98
285 287 8.758829 TCTAAGGATGCAAACAAAGTAGATAGA 58.241 33.333 0.00 0.00 0.00 1.98
286 288 8.821894 GTCTAAGGATGCAAACAAAGTAGATAG 58.178 37.037 0.00 0.00 0.00 2.08
287 289 8.540388 AGTCTAAGGATGCAAACAAAGTAGATA 58.460 33.333 0.00 0.00 0.00 1.98
288 290 7.398024 AGTCTAAGGATGCAAACAAAGTAGAT 58.602 34.615 0.00 0.00 0.00 1.98
417 431 9.562408 TGAGACAACCAAGTTATTAACATGTTA 57.438 29.630 14.35 14.35 0.00 2.41
423 437 8.564574 TGAACATGAGACAACCAAGTTATTAAC 58.435 33.333 0.00 0.00 0.00 2.01
433 447 2.172505 AGGTGTGAACATGAGACAACCA 59.827 45.455 0.00 0.00 0.00 3.67
434 448 2.851195 AGGTGTGAACATGAGACAACC 58.149 47.619 0.00 1.47 0.00 3.77
457 471 7.012894 CACCAACTAAAGAGTACAACAAATCCA 59.987 37.037 0.00 0.00 33.58 3.41
482 496 4.826183 TCATTGATCACAACATCCAACACA 59.174 37.500 0.00 0.00 38.90 3.72
507 521 6.294731 GCTCAAAACTAATGAGTGGTTCCAAT 60.295 38.462 5.54 0.00 44.88 3.16
526 540 1.317431 TACTAGCCTCGCCGCTCAAA 61.317 55.000 0.00 0.00 40.39 2.69
547 561 7.119846 GTGCACCATAGAAGAAAACAAGATAGT 59.880 37.037 5.22 0.00 0.00 2.12
550 564 5.106555 CGTGCACCATAGAAGAAAACAAGAT 60.107 40.000 12.15 0.00 0.00 2.40
596 610 2.291043 GGAGCGGTTGAGGGGAGAA 61.291 63.158 0.00 0.00 0.00 2.87
630 665 2.525055 CTGAAAACGGTTTGTGTGTGG 58.475 47.619 1.45 0.00 0.00 4.17
639 674 2.132762 CTACTCGTGCTGAAAACGGTT 58.867 47.619 0.00 0.00 41.34 4.44
642 677 1.068474 CCCTACTCGTGCTGAAAACG 58.932 55.000 0.00 0.00 42.36 3.60
643 678 2.067013 GACCCTACTCGTGCTGAAAAC 58.933 52.381 0.00 0.00 0.00 2.43
650 690 1.511768 GTCAGGACCCTACTCGTGC 59.488 63.158 0.00 0.00 0.00 5.34
662 702 3.320610 TTGTTGGATTTTGGGTCAGGA 57.679 42.857 0.00 0.00 0.00 3.86
663 703 4.622260 ATTTGTTGGATTTTGGGTCAGG 57.378 40.909 0.00 0.00 0.00 3.86
665 705 6.739331 ACTTATTTGTTGGATTTTGGGTCA 57.261 33.333 0.00 0.00 0.00 4.02
694 734 9.762381 TTGTTGGGTCCTTTTGTAAGATATATT 57.238 29.630 0.00 0.00 32.92 1.28
695 735 9.762381 TTTGTTGGGTCCTTTTGTAAGATATAT 57.238 29.630 0.00 0.00 32.92 0.86
696 736 9.589461 TTTTGTTGGGTCCTTTTGTAAGATATA 57.411 29.630 0.00 0.00 32.92 0.86
697 737 8.364894 GTTTTGTTGGGTCCTTTTGTAAGATAT 58.635 33.333 0.00 0.00 32.92 1.63
698 738 7.562088 AGTTTTGTTGGGTCCTTTTGTAAGATA 59.438 33.333 0.00 0.00 32.92 1.98
699 739 6.382859 AGTTTTGTTGGGTCCTTTTGTAAGAT 59.617 34.615 0.00 0.00 32.92 2.40
700 740 5.717654 AGTTTTGTTGGGTCCTTTTGTAAGA 59.282 36.000 0.00 0.00 32.92 2.10
701 741 5.972935 AGTTTTGTTGGGTCCTTTTGTAAG 58.027 37.500 0.00 0.00 0.00 2.34
702 742 6.890814 TCTAGTTTTGTTGGGTCCTTTTGTAA 59.109 34.615 0.00 0.00 0.00 2.41
703 743 6.424883 TCTAGTTTTGTTGGGTCCTTTTGTA 58.575 36.000 0.00 0.00 0.00 2.41
704 744 5.265989 TCTAGTTTTGTTGGGTCCTTTTGT 58.734 37.500 0.00 0.00 0.00 2.83
705 745 5.845391 TCTAGTTTTGTTGGGTCCTTTTG 57.155 39.130 0.00 0.00 0.00 2.44
706 746 6.860790 TTTCTAGTTTTGTTGGGTCCTTTT 57.139 33.333 0.00 0.00 0.00 2.27
740 780 9.654663 CGGGTCCTTTCTATAAAATATTAGGAG 57.345 37.037 0.49 0.00 0.00 3.69
747 787 9.333724 GTGATTTCGGGTCCTTTCTATAAAATA 57.666 33.333 0.00 0.00 0.00 1.40
811 868 1.425066 AGGTTGTCTTGGATCTTGGCA 59.575 47.619 0.00 0.00 0.00 4.92
829 886 2.582498 GGTTCGTCCATCGCGAGG 60.582 66.667 16.66 15.77 39.61 4.63
884 941 4.288531 CCGTATCACGTGTTCCTTCTATC 58.711 47.826 16.51 0.00 40.58 2.08
886 943 2.159338 GCCGTATCACGTGTTCCTTCTA 60.159 50.000 16.51 0.00 40.58 2.10
921 978 3.261897 AGCCATGTATGTATGTAGAGCCC 59.738 47.826 0.00 0.00 0.00 5.19
959 1016 2.232941 ACTTTCTTTATCGGCTCGTCCA 59.767 45.455 0.00 0.00 34.01 4.02
963 1020 2.159085 AGGGACTTTCTTTATCGGCTCG 60.159 50.000 0.00 0.00 27.25 5.03
1000 1057 4.155733 TTCATCGCCACGGCCGAT 62.156 61.111 35.90 12.06 37.98 4.18
1199 1259 1.403972 GCCACGTCGTCGAGATTGTC 61.404 60.000 9.47 0.00 40.62 3.18
1200 1260 1.443872 GCCACGTCGTCGAGATTGT 60.444 57.895 9.47 0.00 40.62 2.71
1201 1261 1.154016 AGCCACGTCGTCGAGATTG 60.154 57.895 9.47 0.00 40.62 2.67
1202 1262 1.154016 CAGCCACGTCGTCGAGATT 60.154 57.895 9.47 0.00 40.62 2.40
1203 1263 2.038837 TCAGCCACGTCGTCGAGAT 61.039 57.895 9.47 0.00 40.62 2.75
1204 1264 2.667199 TCAGCCACGTCGTCGAGA 60.667 61.111 9.47 0.00 40.62 4.04
1205 1265 2.502080 GTCAGCCACGTCGTCGAG 60.502 66.667 9.47 0.03 40.62 4.04
1206 1266 4.034258 GGTCAGCCACGTCGTCGA 62.034 66.667 9.47 0.00 40.62 4.20
1340 1409 1.672356 CCTTGCTCCACAGGAACCG 60.672 63.158 0.00 0.00 0.00 4.44
1344 1413 0.907486 CATCTCCTTGCTCCACAGGA 59.093 55.000 0.00 0.00 0.00 3.86
1356 1425 2.271497 GCCACTGCAGCATCTCCT 59.729 61.111 15.27 0.00 37.47 3.69
1357 1426 2.045634 TGCCACTGCAGCATCTCC 60.046 61.111 15.27 0.00 44.23 3.71
1380 1449 1.807226 GGCTGGAAATGGTAACCGC 59.193 57.895 0.00 0.00 0.00 5.68
1381 1450 1.373590 CCGGCTGGAAATGGTAACCG 61.374 60.000 5.28 0.00 37.49 4.44
1402 1471 3.992943 ATACCGTTCATGAAGTTCCCA 57.007 42.857 8.80 0.00 0.00 4.37
1448 1525 7.049133 AGATCTGGATCTGAAAAATCAGTCAG 58.951 38.462 11.74 11.03 45.77 3.51
1513 1590 4.686554 ACAGAGCGAAAGTGTGAAAGATAC 59.313 41.667 0.00 0.00 0.00 2.24
1533 1611 5.033326 AGCAAGCAAACAAACAAAAACAG 57.967 34.783 0.00 0.00 0.00 3.16
1560 1638 3.694072 CAGTCAGTTTGTGTTTTCCAGGA 59.306 43.478 0.00 0.00 0.00 3.86
1561 1639 3.443681 ACAGTCAGTTTGTGTTTTCCAGG 59.556 43.478 0.00 0.00 0.00 4.45
1562 1640 4.396166 AGACAGTCAGTTTGTGTTTTCCAG 59.604 41.667 2.66 0.00 0.00 3.86
1563 1641 4.331968 AGACAGTCAGTTTGTGTTTTCCA 58.668 39.130 2.66 0.00 0.00 3.53
1564 1642 4.965119 AGACAGTCAGTTTGTGTTTTCC 57.035 40.909 2.66 0.00 0.00 3.13
1565 1643 6.399986 GCAAAAGACAGTCAGTTTGTGTTTTC 60.400 38.462 21.76 8.31 43.97 2.29
1589 1667 3.426568 GTCAGTCCGCCAGCAAGC 61.427 66.667 0.00 0.00 0.00 4.01
1597 1675 2.506438 GTAGCCACGTCAGTCCGC 60.506 66.667 0.00 0.00 0.00 5.54
1598 1676 1.028330 TAGGTAGCCACGTCAGTCCG 61.028 60.000 0.00 0.00 0.00 4.79
1599 1677 0.455005 GTAGGTAGCCACGTCAGTCC 59.545 60.000 0.00 0.00 0.00 3.85
1640 1718 3.431626 CGTACTAACCATTGGGATCTGCA 60.432 47.826 7.78 0.00 38.05 4.41
1641 1719 3.131396 CGTACTAACCATTGGGATCTGC 58.869 50.000 7.78 0.00 38.05 4.26
1642 1720 4.402056 ACGTACTAACCATTGGGATCTG 57.598 45.455 7.78 0.00 38.05 2.90
1643 1721 5.206587 AGTACGTACTAACCATTGGGATCT 58.793 41.667 26.36 0.00 34.49 2.75
1684 1767 4.202315 ACATACAAACAGACAGCTGGTACA 60.202 41.667 19.93 0.00 42.49 2.90
1734 1867 9.097257 TGCATGCATACATACATACATACATAC 57.903 33.333 18.46 0.00 33.67 2.39
1736 1869 8.617809 CATGCATGCATACATACATACATACAT 58.382 33.333 31.73 2.14 38.05 2.29
1800 2012 5.690409 GTGATACAGTCCACGGTAATACATG 59.310 44.000 0.00 0.00 30.84 3.21
1821 2033 5.187186 GGGATTGTACTGGTAGAAGAAGTGA 59.813 44.000 0.00 0.00 0.00 3.41
1848 2060 1.006102 CTTGTTCCAGACGACGCCT 60.006 57.895 0.00 0.00 0.00 5.52
2005 2217 0.665835 CTGTTGCCCGTGTAAAGCAA 59.334 50.000 0.00 0.00 43.83 3.91
2365 2577 4.211125 TGTATCACCTCCTCTGATGAGTC 58.789 47.826 8.78 0.00 38.61 3.36
2386 2598 1.086067 ACGCTCGCCTTCATCACATG 61.086 55.000 0.00 0.00 0.00 3.21
2496 2708 1.000843 CAATCGACCCTCATGCCGATA 59.999 52.381 0.00 0.00 40.35 2.92
2698 2915 7.169813 TCAAGACGAGATGCATGATACAATAAC 59.830 37.037 2.46 0.00 0.00 1.89
2699 2916 7.209475 TCAAGACGAGATGCATGATACAATAA 58.791 34.615 2.46 0.00 0.00 1.40
2704 2921 4.864633 TCTCAAGACGAGATGCATGATAC 58.135 43.478 2.46 0.00 46.18 2.24
2716 3072 6.071896 ACTGACATACTCAATTCTCAAGACGA 60.072 38.462 0.00 0.00 0.00 4.20
2718 3074 6.183360 GCACTGACATACTCAATTCTCAAGAC 60.183 42.308 0.00 0.00 0.00 3.01
2971 3560 9.834628 CATACACGGTTCATTAGTTTGTTTATT 57.165 29.630 0.00 0.00 0.00 1.40
2972 3561 9.221933 TCATACACGGTTCATTAGTTTGTTTAT 57.778 29.630 0.00 0.00 0.00 1.40
2973 3562 8.604640 TCATACACGGTTCATTAGTTTGTTTA 57.395 30.769 0.00 0.00 0.00 2.01
3249 3849 1.425694 TGGCACCACCACTTGTACTA 58.574 50.000 0.00 0.00 46.36 1.82
3297 3897 1.288188 TGGTGGCATGGATGAGAAGA 58.712 50.000 0.00 0.00 0.00 2.87
3454 4057 3.410628 TCCATGGAGCACGGGCAT 61.411 61.111 14.57 0.00 44.61 4.40
3676 4279 8.737846 CATGAATCTCATGCATCACGGTATGC 62.738 46.154 15.12 15.12 46.37 3.14
3698 4301 6.095860 ACCAGAACATATTGGACATCAACATG 59.904 38.462 0.00 0.00 43.76 3.21
3704 4317 7.121168 TGAAAGAACCAGAACATATTGGACATC 59.879 37.037 0.00 0.00 37.89 3.06
3758 4377 8.037382 ACTGAGAACAATTTCATGTATGTCTG 57.963 34.615 0.00 0.00 33.72 3.51
3773 4392 5.970317 TCAGACGGTAATACTGAGAACAA 57.030 39.130 6.20 0.00 36.04 2.83
3775 4394 5.575995 GGTTTCAGACGGTAATACTGAGAAC 59.424 44.000 6.20 0.00 40.82 3.01
3779 4398 5.733620 AAGGTTTCAGACGGTAATACTGA 57.266 39.130 6.20 0.00 38.61 3.41
3784 4403 5.250200 TGCATAAAGGTTTCAGACGGTAAT 58.750 37.500 0.00 0.00 0.00 1.89
3789 4408 2.483877 TGCTGCATAAAGGTTTCAGACG 59.516 45.455 0.00 0.00 0.00 4.18
3795 4414 5.726980 TCAAATCTGCTGCATAAAGGTTT 57.273 34.783 1.31 0.00 0.00 3.27
3822 4441 5.361285 TCATGATGATGGACATGCATGAAAA 59.639 36.000 32.75 16.71 42.71 2.29
3890 4509 2.619177 TCAATTTTTCTCCCGTCGCAAA 59.381 40.909 0.00 0.00 0.00 3.68
3895 4514 7.094762 GGTGGATATATCAATTTTTCTCCCGTC 60.095 40.741 14.60 0.00 0.00 4.79
3912 4531 7.335924 GCAACAGTAGAAGTTTTGGTGGATATA 59.664 37.037 0.00 0.00 0.00 0.86
3984 4603 2.560981 TCGGAGTCAATCACAGCTTACA 59.439 45.455 0.00 0.00 0.00 2.41
4031 4650 3.756434 CCACCATTGTTGTAAAGTCGGAT 59.244 43.478 0.00 0.00 0.00 4.18
4093 4712 2.205022 TGCTGCAAAGCTAGACCATT 57.795 45.000 0.00 0.00 35.49 3.16
4094 4713 2.426024 CAATGCTGCAAAGCTAGACCAT 59.574 45.455 6.36 0.00 35.49 3.55
4120 5175 2.415893 CCAATTAAAGCAAGGACAGCCG 60.416 50.000 0.00 0.00 39.96 5.52
4122 5177 3.838120 GTCCAATTAAAGCAAGGACAGC 58.162 45.455 0.00 0.00 46.15 4.40
4137 5192 6.117488 ACGAAGGAATTTAATACCGTCCAAT 58.883 36.000 0.00 0.00 0.00 3.16
4139 5194 5.088680 ACGAAGGAATTTAATACCGTCCA 57.911 39.130 0.00 0.00 0.00 4.02
4146 5247 9.127277 CCTTATGGGAAACGAAGGAATTTAATA 57.873 33.333 0.00 0.00 40.88 0.98
4166 5267 4.758674 CACTCCATTATGACCAGCCTTATG 59.241 45.833 0.00 0.00 0.00 1.90
4167 5268 4.413520 ACACTCCATTATGACCAGCCTTAT 59.586 41.667 0.00 0.00 0.00 1.73
4168 5269 3.780294 ACACTCCATTATGACCAGCCTTA 59.220 43.478 0.00 0.00 0.00 2.69
4169 5270 2.578021 ACACTCCATTATGACCAGCCTT 59.422 45.455 0.00 0.00 0.00 4.35
4170 5271 2.200081 ACACTCCATTATGACCAGCCT 58.800 47.619 0.00 0.00 0.00 4.58
4171 5272 2.717639 ACACTCCATTATGACCAGCC 57.282 50.000 0.00 0.00 0.00 4.85
4172 5273 4.770795 AGTTACACTCCATTATGACCAGC 58.229 43.478 0.00 0.00 0.00 4.85
4273 5374 9.686683 AGTCTACAAGTCATTAAATAAAGCCAT 57.313 29.630 0.00 0.00 0.00 4.40
4274 5375 9.162764 GAGTCTACAAGTCATTAAATAAAGCCA 57.837 33.333 0.00 0.00 0.00 4.75
4275 5376 9.162764 TGAGTCTACAAGTCATTAAATAAAGCC 57.837 33.333 0.00 0.00 32.19 4.35
4287 5388 8.792633 CCCAAAATAAAATGAGTCTACAAGTCA 58.207 33.333 0.00 0.00 41.55 3.41
4288 5389 9.010029 TCCCAAAATAAAATGAGTCTACAAGTC 57.990 33.333 0.00 0.00 0.00 3.01
4289 5390 8.934023 TCCCAAAATAAAATGAGTCTACAAGT 57.066 30.769 0.00 0.00 0.00 3.16
4292 5393 8.748412 CCATTCCCAAAATAAAATGAGTCTACA 58.252 33.333 0.00 0.00 32.14 2.74
4293 5394 7.706607 GCCATTCCCAAAATAAAATGAGTCTAC 59.293 37.037 0.00 0.00 32.14 2.59
4294 5395 7.619302 AGCCATTCCCAAAATAAAATGAGTCTA 59.381 33.333 0.00 0.00 32.14 2.59
4295 5396 6.441604 AGCCATTCCCAAAATAAAATGAGTCT 59.558 34.615 0.00 0.00 32.14 3.24
4296 5397 6.643388 AGCCATTCCCAAAATAAAATGAGTC 58.357 36.000 0.00 0.00 32.14 3.36
4297 5398 6.625532 AGCCATTCCCAAAATAAAATGAGT 57.374 33.333 0.00 0.00 32.14 3.41
4298 5399 8.206189 ACATAGCCATTCCCAAAATAAAATGAG 58.794 33.333 0.00 0.00 32.14 2.90
4299 5400 8.088463 ACATAGCCATTCCCAAAATAAAATGA 57.912 30.769 0.00 0.00 32.14 2.57
4300 5401 8.735692 AACATAGCCATTCCCAAAATAAAATG 57.264 30.769 0.00 0.00 0.00 2.32
4301 5402 9.830975 GTAACATAGCCATTCCCAAAATAAAAT 57.169 29.630 0.00 0.00 0.00 1.82
4302 5403 8.816894 TGTAACATAGCCATTCCCAAAATAAAA 58.183 29.630 0.00 0.00 0.00 1.52
4303 5404 8.367660 TGTAACATAGCCATTCCCAAAATAAA 57.632 30.769 0.00 0.00 0.00 1.40
4304 5405 7.617723 ACTGTAACATAGCCATTCCCAAAATAA 59.382 33.333 0.00 0.00 0.00 1.40
4305 5406 7.122715 ACTGTAACATAGCCATTCCCAAAATA 58.877 34.615 0.00 0.00 0.00 1.40
4306 5407 5.957774 ACTGTAACATAGCCATTCCCAAAAT 59.042 36.000 0.00 0.00 0.00 1.82
4307 5408 5.329399 ACTGTAACATAGCCATTCCCAAAA 58.671 37.500 0.00 0.00 0.00 2.44
4308 5409 4.929479 ACTGTAACATAGCCATTCCCAAA 58.071 39.130 0.00 0.00 0.00 3.28
4309 5410 4.584638 ACTGTAACATAGCCATTCCCAA 57.415 40.909 0.00 0.00 0.00 4.12
4310 5411 5.702065 TTACTGTAACATAGCCATTCCCA 57.298 39.130 0.00 0.00 0.00 4.37
4341 5442 7.201617 GGCATGTAGTTAATGAGAAGTGGTAAC 60.202 40.741 0.00 0.00 0.00 2.50
4342 5443 6.821665 GGCATGTAGTTAATGAGAAGTGGTAA 59.178 38.462 0.00 0.00 0.00 2.85
4343 5444 6.070481 TGGCATGTAGTTAATGAGAAGTGGTA 60.070 38.462 0.00 0.00 0.00 3.25
4344 5445 5.186198 GGCATGTAGTTAATGAGAAGTGGT 58.814 41.667 0.00 0.00 0.00 4.16
4345 5446 5.185454 TGGCATGTAGTTAATGAGAAGTGG 58.815 41.667 0.00 0.00 0.00 4.00
4346 5447 6.932356 ATGGCATGTAGTTAATGAGAAGTG 57.068 37.500 0.00 0.00 0.00 3.16
4349 5450 9.219603 GCTTATATGGCATGTAGTTAATGAGAA 57.780 33.333 10.98 0.00 0.00 2.87
4350 5451 8.374743 TGCTTATATGGCATGTAGTTAATGAGA 58.625 33.333 10.98 0.00 34.56 3.27
4351 5452 8.552083 TGCTTATATGGCATGTAGTTAATGAG 57.448 34.615 10.98 1.07 34.56 2.90
4352 5453 8.916628 TTGCTTATATGGCATGTAGTTAATGA 57.083 30.769 10.98 0.00 39.54 2.57
4353 5454 9.964303 TTTTGCTTATATGGCATGTAGTTAATG 57.036 29.630 10.98 0.00 39.54 1.90
4357 5458 9.889128 AAATTTTTGCTTATATGGCATGTAGTT 57.111 25.926 10.98 0.00 39.54 2.24
4358 5459 9.533253 GAAATTTTTGCTTATATGGCATGTAGT 57.467 29.630 10.98 0.00 39.54 2.73
4359 5460 9.754382 AGAAATTTTTGCTTATATGGCATGTAG 57.246 29.630 10.98 5.65 39.54 2.74
4360 5461 9.748708 GAGAAATTTTTGCTTATATGGCATGTA 57.251 29.630 10.98 4.81 39.54 2.29
4361 5462 8.259411 TGAGAAATTTTTGCTTATATGGCATGT 58.741 29.630 10.98 6.03 39.54 3.21
4362 5463 8.651391 TGAGAAATTTTTGCTTATATGGCATG 57.349 30.769 10.98 0.00 39.54 4.06
4363 5464 9.669887 TTTGAGAAATTTTTGCTTATATGGCAT 57.330 25.926 4.88 4.88 39.54 4.40
4364 5465 9.499479 TTTTGAGAAATTTTTGCTTATATGGCA 57.501 25.926 0.00 0.00 37.97 4.92
4381 5482 8.450964 GCTGCTAACATAGTACATTTTGAGAAA 58.549 33.333 0.00 0.00 0.00 2.52
4382 5483 7.824289 AGCTGCTAACATAGTACATTTTGAGAA 59.176 33.333 0.00 0.00 0.00 2.87
4383 5484 7.331026 AGCTGCTAACATAGTACATTTTGAGA 58.669 34.615 0.00 0.00 0.00 3.27
4384 5485 7.545362 AGCTGCTAACATAGTACATTTTGAG 57.455 36.000 0.00 0.00 0.00 3.02
4385 5486 9.098355 CTTAGCTGCTAACATAGTACATTTTGA 57.902 33.333 17.67 0.00 0.00 2.69
4386 5487 8.883731 ACTTAGCTGCTAACATAGTACATTTTG 58.116 33.333 17.67 6.09 0.00 2.44
4387 5488 9.449719 AACTTAGCTGCTAACATAGTACATTTT 57.550 29.630 17.67 0.00 0.00 1.82
4389 5490 9.530633 GTAACTTAGCTGCTAACATAGTACATT 57.469 33.333 17.67 2.89 0.00 2.71
4390 5491 8.915036 AGTAACTTAGCTGCTAACATAGTACAT 58.085 33.333 17.67 3.21 0.00 2.29
4391 5492 8.289939 AGTAACTTAGCTGCTAACATAGTACA 57.710 34.615 17.67 4.20 0.00 2.90
4392 5493 7.861872 GGAGTAACTTAGCTGCTAACATAGTAC 59.138 40.741 17.67 12.64 0.00 2.73
4393 5494 7.014038 GGGAGTAACTTAGCTGCTAACATAGTA 59.986 40.741 17.67 3.94 0.00 1.82
4394 5495 6.183360 GGGAGTAACTTAGCTGCTAACATAGT 60.183 42.308 17.67 14.89 0.00 2.12
4395 5496 6.183360 TGGGAGTAACTTAGCTGCTAACATAG 60.183 42.308 17.67 10.80 0.00 2.23
4396 5497 5.659525 TGGGAGTAACTTAGCTGCTAACATA 59.340 40.000 17.67 10.78 0.00 2.29
4397 5498 4.469945 TGGGAGTAACTTAGCTGCTAACAT 59.530 41.667 17.67 11.69 0.00 2.71
4398 5499 3.835978 TGGGAGTAACTTAGCTGCTAACA 59.164 43.478 17.67 9.11 0.00 2.41
4399 5500 4.081586 AGTGGGAGTAACTTAGCTGCTAAC 60.082 45.833 17.67 9.32 0.00 2.34
4400 5501 4.094476 AGTGGGAGTAACTTAGCTGCTAA 58.906 43.478 20.04 20.04 0.00 3.09
4401 5502 3.709587 AGTGGGAGTAACTTAGCTGCTA 58.290 45.455 5.02 5.02 0.00 3.49
4402 5503 2.541466 AGTGGGAGTAACTTAGCTGCT 58.459 47.619 7.57 7.57 0.00 4.24
4403 5504 4.099573 TCATAGTGGGAGTAACTTAGCTGC 59.900 45.833 0.00 0.00 0.00 5.25
4404 5505 5.361285 AGTCATAGTGGGAGTAACTTAGCTG 59.639 44.000 0.00 0.00 0.00 4.24
4405 5506 5.520751 AGTCATAGTGGGAGTAACTTAGCT 58.479 41.667 0.00 0.00 0.00 3.32
4406 5507 5.855740 AGTCATAGTGGGAGTAACTTAGC 57.144 43.478 0.00 0.00 0.00 3.09
4407 5508 7.994334 AGACTAGTCATAGTGGGAGTAACTTAG 59.006 40.741 24.44 0.00 42.46 2.18
4408 5509 7.870027 AGACTAGTCATAGTGGGAGTAACTTA 58.130 38.462 24.44 0.00 42.46 2.24
4409 5510 6.733509 AGACTAGTCATAGTGGGAGTAACTT 58.266 40.000 24.44 0.00 42.46 2.66
4410 5511 6.330178 AGACTAGTCATAGTGGGAGTAACT 57.670 41.667 24.44 0.00 42.46 2.24
4411 5512 7.255208 GCTTAGACTAGTCATAGTGGGAGTAAC 60.255 44.444 24.44 2.34 42.46 2.50
4412 5513 6.771749 GCTTAGACTAGTCATAGTGGGAGTAA 59.228 42.308 24.44 9.17 42.46 2.24
4413 5514 6.126565 TGCTTAGACTAGTCATAGTGGGAGTA 60.127 42.308 24.44 6.99 42.46 2.59
4414 5515 5.134661 GCTTAGACTAGTCATAGTGGGAGT 58.865 45.833 24.44 2.59 42.46 3.85
4415 5516 5.133941 TGCTTAGACTAGTCATAGTGGGAG 58.866 45.833 24.44 10.45 42.46 4.30
4416 5517 5.125367 TGCTTAGACTAGTCATAGTGGGA 57.875 43.478 24.44 6.96 42.46 4.37
4417 5518 5.303078 ACATGCTTAGACTAGTCATAGTGGG 59.697 44.000 24.44 14.35 42.46 4.61
4418 5519 6.398234 ACATGCTTAGACTAGTCATAGTGG 57.602 41.667 24.44 14.62 42.46 4.00
4419 5520 6.264292 AGGACATGCTTAGACTAGTCATAGTG 59.736 42.308 24.44 16.03 42.46 2.74
4420 5521 6.369629 AGGACATGCTTAGACTAGTCATAGT 58.630 40.000 24.44 12.10 45.16 2.12
4421 5522 6.892658 AGGACATGCTTAGACTAGTCATAG 57.107 41.667 24.44 19.63 34.96 2.23
4422 5523 6.265649 GGAAGGACATGCTTAGACTAGTCATA 59.734 42.308 24.44 10.73 0.00 2.15
4423 5524 5.069781 GGAAGGACATGCTTAGACTAGTCAT 59.930 44.000 24.44 12.01 0.00 3.06
4424 5525 4.402793 GGAAGGACATGCTTAGACTAGTCA 59.597 45.833 24.44 8.16 0.00 3.41
4425 5526 4.647399 AGGAAGGACATGCTTAGACTAGTC 59.353 45.833 15.41 15.41 0.00 2.59
4426 5527 4.615513 AGGAAGGACATGCTTAGACTAGT 58.384 43.478 0.00 0.00 0.00 2.57
4427 5528 5.452636 GGAAGGAAGGACATGCTTAGACTAG 60.453 48.000 0.00 0.00 30.48 2.57
4428 5529 4.406003 GGAAGGAAGGACATGCTTAGACTA 59.594 45.833 0.00 0.00 30.48 2.59
4429 5530 3.198853 GGAAGGAAGGACATGCTTAGACT 59.801 47.826 0.00 0.00 30.48 3.24
4430 5531 3.198853 AGGAAGGAAGGACATGCTTAGAC 59.801 47.826 0.00 0.00 30.48 2.59
4431 5532 3.452627 GAGGAAGGAAGGACATGCTTAGA 59.547 47.826 0.00 0.00 30.48 2.10
4432 5533 3.198635 TGAGGAAGGAAGGACATGCTTAG 59.801 47.826 0.00 0.00 30.48 2.18
4542 5667 2.476320 GGAGCAATCAAGGAGCCGC 61.476 63.158 0.00 0.00 0.00 6.53
4543 5668 0.393537 AAGGAGCAATCAAGGAGCCG 60.394 55.000 0.00 0.00 0.00 5.52
4544 5669 1.101331 CAAGGAGCAATCAAGGAGCC 58.899 55.000 0.00 0.00 0.00 4.70
4545 5670 2.119801 TCAAGGAGCAATCAAGGAGC 57.880 50.000 0.00 0.00 0.00 4.70
4546 5671 5.393896 GGAAAATCAAGGAGCAATCAAGGAG 60.394 44.000 0.00 0.00 0.00 3.69
4547 5672 4.463891 GGAAAATCAAGGAGCAATCAAGGA 59.536 41.667 0.00 0.00 0.00 3.36
4548 5673 4.221262 TGGAAAATCAAGGAGCAATCAAGG 59.779 41.667 0.00 0.00 0.00 3.61
4549 5674 5.184479 TCTGGAAAATCAAGGAGCAATCAAG 59.816 40.000 0.00 0.00 0.00 3.02
4550 5675 5.047802 GTCTGGAAAATCAAGGAGCAATCAA 60.048 40.000 0.00 0.00 0.00 2.57
4551 5676 4.460382 GTCTGGAAAATCAAGGAGCAATCA 59.540 41.667 0.00 0.00 0.00 2.57
4552 5677 4.460382 TGTCTGGAAAATCAAGGAGCAATC 59.540 41.667 0.00 0.00 0.00 2.67
4553 5678 4.410099 TGTCTGGAAAATCAAGGAGCAAT 58.590 39.130 0.00 0.00 0.00 3.56
4554 5679 3.831323 TGTCTGGAAAATCAAGGAGCAA 58.169 40.909 0.00 0.00 0.00 3.91
4555 5680 3.507162 TGTCTGGAAAATCAAGGAGCA 57.493 42.857 0.00 0.00 0.00 4.26
4571 5696 8.464404 TGCTTTATATACGTCTGTAAGTTGTCT 58.536 33.333 0.00 0.00 33.44 3.41
4579 5704 8.859236 ATCCTACTGCTTTATATACGTCTGTA 57.141 34.615 0.00 0.00 34.45 2.74
4586 5711 9.555727 TCCAACAAATCCTACTGCTTTATATAC 57.444 33.333 0.00 0.00 0.00 1.47
4596 5721 5.334879 CGTTCCTTTCCAACAAATCCTACTG 60.335 44.000 0.00 0.00 0.00 2.74
4597 5722 4.760204 CGTTCCTTTCCAACAAATCCTACT 59.240 41.667 0.00 0.00 0.00 2.57
4609 5734 1.149627 CCCACACCGTTCCTTTCCA 59.850 57.895 0.00 0.00 0.00 3.53
4611 5736 0.108019 AGTCCCACACCGTTCCTTTC 59.892 55.000 0.00 0.00 0.00 2.62
4618 5743 3.244770 ACAATTGAATAGTCCCACACCGT 60.245 43.478 13.59 0.00 0.00 4.83
4619 5744 3.343617 ACAATTGAATAGTCCCACACCG 58.656 45.455 13.59 0.00 0.00 4.94
4645 5770 6.567687 ATTTGTGTTGGTATGAACGATTCA 57.432 33.333 0.00 0.00 45.01 2.57
4651 5776 6.858993 TCGCTTTTATTTGTGTTGGTATGAAC 59.141 34.615 0.00 0.00 0.00 3.18
4654 5779 7.630470 TTTCGCTTTTATTTGTGTTGGTATG 57.370 32.000 0.00 0.00 0.00 2.39
4659 5784 9.907576 TTAACATTTTCGCTTTTATTTGTGTTG 57.092 25.926 0.00 0.00 0.00 3.33
4668 5793 4.228317 GGGCGTTAACATTTTCGCTTTTA 58.772 39.130 6.39 0.00 46.37 1.52
4675 5800 2.287129 ACGTGTGGGCGTTAACATTTTC 60.287 45.455 6.39 0.00 43.04 2.29
4676 5801 1.677052 ACGTGTGGGCGTTAACATTTT 59.323 42.857 6.39 0.00 43.04 1.82
4677 5802 1.002251 CACGTGTGGGCGTTAACATTT 60.002 47.619 7.58 0.00 43.83 2.32
4678 5803 0.589223 CACGTGTGGGCGTTAACATT 59.411 50.000 7.58 0.00 43.83 2.71
4679 5804 0.533308 ACACGTGTGGGCGTTAACAT 60.533 50.000 22.71 0.00 43.83 2.71
4680 5805 1.153409 ACACGTGTGGGCGTTAACA 60.153 52.632 22.71 0.00 43.83 2.41
4681 5806 1.277440 CACACGTGTGGGCGTTAAC 59.723 57.895 35.65 0.00 43.83 2.01
4682 5807 3.720531 CACACGTGTGGGCGTTAA 58.279 55.556 35.65 0.00 43.83 2.01
4701 5826 2.251371 GGACGAGTTGGCAAACGC 59.749 61.111 21.70 15.87 41.45 4.84
4702 5827 1.278637 GTGGACGAGTTGGCAAACG 59.721 57.895 20.68 20.68 41.45 3.60
4703 5828 0.028902 GTGTGGACGAGTTGGCAAAC 59.971 55.000 0.00 0.00 36.47 2.93
4704 5829 2.399856 GTGTGGACGAGTTGGCAAA 58.600 52.632 0.00 0.00 0.00 3.68
4705 5830 4.134623 GTGTGGACGAGTTGGCAA 57.865 55.556 0.00 0.00 0.00 4.52
4715 5840 1.298859 GGTGATGAAGGCGTGTGGAC 61.299 60.000 0.00 0.00 0.00 4.02
4716 5841 1.003839 GGTGATGAAGGCGTGTGGA 60.004 57.895 0.00 0.00 0.00 4.02
4717 5842 2.390599 CGGTGATGAAGGCGTGTGG 61.391 63.158 0.00 0.00 0.00 4.17
4718 5843 1.227999 AACGGTGATGAAGGCGTGTG 61.228 55.000 0.00 0.00 0.00 3.82
4719 5844 0.949105 GAACGGTGATGAAGGCGTGT 60.949 55.000 0.00 0.00 0.00 4.49
4720 5845 0.948623 TGAACGGTGATGAAGGCGTG 60.949 55.000 0.00 0.00 0.00 5.34
4721 5846 0.670546 CTGAACGGTGATGAAGGCGT 60.671 55.000 0.00 0.00 0.00 5.68
4722 5847 0.389817 TCTGAACGGTGATGAAGGCG 60.390 55.000 0.00 0.00 0.00 5.52
4723 5848 1.079503 GTCTGAACGGTGATGAAGGC 58.920 55.000 0.00 0.00 0.00 4.35
4724 5849 2.751166 AGTCTGAACGGTGATGAAGG 57.249 50.000 0.00 0.00 0.00 3.46
4725 5850 3.919216 AGAAGTCTGAACGGTGATGAAG 58.081 45.455 0.00 0.00 0.00 3.02
4726 5851 5.661056 ATAGAAGTCTGAACGGTGATGAA 57.339 39.130 0.00 0.00 0.00 2.57
4727 5852 5.220796 CGTATAGAAGTCTGAACGGTGATGA 60.221 44.000 8.56 0.00 34.17 2.92
4728 5853 4.970611 CGTATAGAAGTCTGAACGGTGATG 59.029 45.833 8.56 0.00 34.17 3.07
4729 5854 4.880120 TCGTATAGAAGTCTGAACGGTGAT 59.120 41.667 13.78 0.00 36.63 3.06
4730 5855 4.256110 TCGTATAGAAGTCTGAACGGTGA 58.744 43.478 13.78 0.00 36.63 4.02
4731 5856 4.611310 TCGTATAGAAGTCTGAACGGTG 57.389 45.455 13.78 0.00 36.63 4.94
4732 5857 5.589452 AGATTCGTATAGAAGTCTGAACGGT 59.411 40.000 13.78 6.61 42.92 4.83
4733 5858 6.062434 AGATTCGTATAGAAGTCTGAACGG 57.938 41.667 13.78 0.00 42.92 4.44
4734 5859 6.415280 CCAAGATTCGTATAGAAGTCTGAACG 59.585 42.308 9.67 9.67 42.92 3.95
4735 5860 6.199342 GCCAAGATTCGTATAGAAGTCTGAAC 59.801 42.308 0.00 0.00 42.92 3.18
4736 5861 6.127451 TGCCAAGATTCGTATAGAAGTCTGAA 60.127 38.462 0.00 0.00 42.92 3.02
4737 5862 5.359860 TGCCAAGATTCGTATAGAAGTCTGA 59.640 40.000 0.00 0.00 42.92 3.27
4738 5863 5.592054 TGCCAAGATTCGTATAGAAGTCTG 58.408 41.667 0.00 0.00 42.92 3.51
4739 5864 5.854010 TGCCAAGATTCGTATAGAAGTCT 57.146 39.130 0.00 0.00 42.92 3.24
4740 5865 6.216569 TCATGCCAAGATTCGTATAGAAGTC 58.783 40.000 0.00 0.00 42.92 3.01
4741 5866 6.161855 TCATGCCAAGATTCGTATAGAAGT 57.838 37.500 0.00 0.00 42.92 3.01
4742 5867 7.664082 ATTCATGCCAAGATTCGTATAGAAG 57.336 36.000 0.00 0.00 42.92 2.85
4743 5868 9.208022 CTAATTCATGCCAAGATTCGTATAGAA 57.792 33.333 0.00 0.00 43.93 2.10
4744 5869 7.331934 GCTAATTCATGCCAAGATTCGTATAGA 59.668 37.037 0.00 0.00 0.00 1.98
4745 5870 7.332926 AGCTAATTCATGCCAAGATTCGTATAG 59.667 37.037 0.00 0.00 0.00 1.31
4746 5871 7.118245 CAGCTAATTCATGCCAAGATTCGTATA 59.882 37.037 0.00 0.00 0.00 1.47
4747 5872 6.000219 AGCTAATTCATGCCAAGATTCGTAT 59.000 36.000 0.00 0.00 0.00 3.06
4748 5873 5.237127 CAGCTAATTCATGCCAAGATTCGTA 59.763 40.000 0.00 0.00 0.00 3.43
4749 5874 4.036027 CAGCTAATTCATGCCAAGATTCGT 59.964 41.667 0.00 0.00 0.00 3.85
4750 5875 4.274214 TCAGCTAATTCATGCCAAGATTCG 59.726 41.667 0.00 0.00 0.00 3.34
4751 5876 5.762825 TCAGCTAATTCATGCCAAGATTC 57.237 39.130 0.00 0.00 0.00 2.52
4752 5877 6.726490 AATCAGCTAATTCATGCCAAGATT 57.274 33.333 0.00 0.00 0.00 2.40
4753 5878 6.726490 AAATCAGCTAATTCATGCCAAGAT 57.274 33.333 0.00 0.00 0.00 2.40
4754 5879 6.071221 ACAAAATCAGCTAATTCATGCCAAGA 60.071 34.615 0.00 0.00 0.00 3.02
4755 5880 6.103997 ACAAAATCAGCTAATTCATGCCAAG 58.896 36.000 0.00 0.00 0.00 3.61
4756 5881 6.040209 ACAAAATCAGCTAATTCATGCCAA 57.960 33.333 0.00 0.00 0.00 4.52
4757 5882 5.664294 ACAAAATCAGCTAATTCATGCCA 57.336 34.783 0.00 0.00 0.00 4.92
4758 5883 6.145048 GCATACAAAATCAGCTAATTCATGCC 59.855 38.462 6.97 0.00 0.00 4.40
4759 5884 6.145048 GGCATACAAAATCAGCTAATTCATGC 59.855 38.462 8.73 8.73 34.58 4.06
4760 5885 7.168637 GTGGCATACAAAATCAGCTAATTCATG 59.831 37.037 0.00 0.00 0.00 3.07
4761 5886 7.205297 GTGGCATACAAAATCAGCTAATTCAT 58.795 34.615 0.00 0.00 0.00 2.57
4762 5887 6.563422 GTGGCATACAAAATCAGCTAATTCA 58.437 36.000 0.00 0.00 0.00 2.57
4763 5888 5.682862 CGTGGCATACAAAATCAGCTAATTC 59.317 40.000 0.00 0.00 0.00 2.17
4764 5889 5.125417 ACGTGGCATACAAAATCAGCTAATT 59.875 36.000 0.00 0.00 0.00 1.40
4765 5890 4.640201 ACGTGGCATACAAAATCAGCTAAT 59.360 37.500 0.00 0.00 0.00 1.73
4766 5891 4.006989 ACGTGGCATACAAAATCAGCTAA 58.993 39.130 0.00 0.00 0.00 3.09
4767 5892 3.605634 ACGTGGCATACAAAATCAGCTA 58.394 40.909 0.00 0.00 0.00 3.32
4768 5893 2.436417 ACGTGGCATACAAAATCAGCT 58.564 42.857 0.00 0.00 0.00 4.24
4769 5894 2.919666 ACGTGGCATACAAAATCAGC 57.080 45.000 0.00 0.00 0.00 4.26
4770 5895 4.034048 GTCCTACGTGGCATACAAAATCAG 59.966 45.833 0.00 0.00 35.26 2.90
4771 5896 3.936453 GTCCTACGTGGCATACAAAATCA 59.064 43.478 0.00 0.00 35.26 2.57
4772 5897 3.936453 TGTCCTACGTGGCATACAAAATC 59.064 43.478 0.00 0.00 35.26 2.17
4773 5898 3.945346 TGTCCTACGTGGCATACAAAAT 58.055 40.909 0.00 0.00 35.26 1.82
4774 5899 3.404224 TGTCCTACGTGGCATACAAAA 57.596 42.857 0.00 0.00 35.26 2.44
4775 5900 3.068560 GTTGTCCTACGTGGCATACAAA 58.931 45.455 12.06 0.00 33.61 2.83
4776 5901 2.300723 AGTTGTCCTACGTGGCATACAA 59.699 45.455 0.00 3.47 35.26 2.41
4777 5902 1.897133 AGTTGTCCTACGTGGCATACA 59.103 47.619 0.00 0.00 35.26 2.29
4778 5903 2.537401 GAGTTGTCCTACGTGGCATAC 58.463 52.381 0.00 0.00 35.26 2.39
4779 5904 1.133598 CGAGTTGTCCTACGTGGCATA 59.866 52.381 0.00 0.00 35.26 3.14
4780 5905 0.108804 CGAGTTGTCCTACGTGGCAT 60.109 55.000 0.00 0.00 35.26 4.40
4781 5906 1.287815 CGAGTTGTCCTACGTGGCA 59.712 57.895 0.00 0.00 35.26 4.92
4782 5907 1.288127 ACGAGTTGTCCTACGTGGC 59.712 57.895 0.00 0.00 37.58 5.01
4785 5910 1.027357 ACACACGAGTTGTCCTACGT 58.973 50.000 0.00 0.00 35.67 3.57
4786 5911 1.268896 ACACACACGAGTTGTCCTACG 60.269 52.381 0.00 0.00 35.67 3.51
4787 5912 2.124903 CACACACACGAGTTGTCCTAC 58.875 52.381 0.00 0.00 35.67 3.18
4788 5913 1.067974 CCACACACACGAGTTGTCCTA 59.932 52.381 0.00 0.00 35.67 2.94
4789 5914 0.179084 CCACACACACGAGTTGTCCT 60.179 55.000 0.00 0.00 35.67 3.85
4790 5915 0.461339 ACCACACACACGAGTTGTCC 60.461 55.000 0.00 0.00 35.67 4.02
4791 5916 0.650512 CACCACACACACGAGTTGTC 59.349 55.000 0.00 0.00 35.67 3.18
4792 5917 0.036765 ACACCACACACACGAGTTGT 60.037 50.000 0.00 0.00 39.97 3.32
4793 5918 0.373370 CACACCACACACACGAGTTG 59.627 55.000 0.00 0.00 0.00 3.16
4794 5919 0.036765 ACACACCACACACACGAGTT 60.037 50.000 0.00 0.00 0.00 3.01
4795 5920 0.739462 CACACACCACACACACGAGT 60.739 55.000 0.00 0.00 0.00 4.18
4796 5921 0.459411 TCACACACCACACACACGAG 60.459 55.000 0.00 0.00 0.00 4.18
4797 5922 0.459411 CTCACACACCACACACACGA 60.459 55.000 0.00 0.00 0.00 4.35
4798 5923 0.459411 TCTCACACACCACACACACG 60.459 55.000 0.00 0.00 0.00 4.49
4799 5924 1.134818 TCTCTCACACACCACACACAC 60.135 52.381 0.00 0.00 0.00 3.82
4800 5925 1.136891 CTCTCTCACACACCACACACA 59.863 52.381 0.00 0.00 0.00 3.72
4801 5926 1.539065 CCTCTCTCACACACCACACAC 60.539 57.143 0.00 0.00 0.00 3.82
4802 5927 0.752658 CCTCTCTCACACACCACACA 59.247 55.000 0.00 0.00 0.00 3.72
4803 5928 0.753262 ACCTCTCTCACACACCACAC 59.247 55.000 0.00 0.00 0.00 3.82
4804 5929 1.040646 GACCTCTCTCACACACCACA 58.959 55.000 0.00 0.00 0.00 4.17
4805 5930 0.039074 CGACCTCTCTCACACACCAC 60.039 60.000 0.00 0.00 0.00 4.16
4806 5931 0.467474 ACGACCTCTCTCACACACCA 60.467 55.000 0.00 0.00 0.00 4.17
4807 5932 0.674534 AACGACCTCTCTCACACACC 59.325 55.000 0.00 0.00 0.00 4.16
4808 5933 1.337071 TGAACGACCTCTCTCACACAC 59.663 52.381 0.00 0.00 0.00 3.82
4809 5934 1.337071 GTGAACGACCTCTCTCACACA 59.663 52.381 0.00 0.00 38.43 3.72
4810 5935 1.337071 TGTGAACGACCTCTCTCACAC 59.663 52.381 0.00 0.00 42.36 3.82
4811 5936 1.337071 GTGTGAACGACCTCTCTCACA 59.663 52.381 0.00 0.00 44.38 3.58
4812 5937 1.337071 TGTGTGAACGACCTCTCTCAC 59.663 52.381 0.00 0.00 38.91 3.51
4813 5938 1.687563 TGTGTGAACGACCTCTCTCA 58.312 50.000 0.00 0.00 0.00 3.27
4814 5939 2.416162 GGATGTGTGAACGACCTCTCTC 60.416 54.545 0.00 0.00 0.00 3.20
4815 5940 1.546476 GGATGTGTGAACGACCTCTCT 59.454 52.381 0.00 0.00 0.00 3.10
4816 5941 1.546476 AGGATGTGTGAACGACCTCTC 59.454 52.381 0.00 0.00 0.00 3.20
4817 5942 1.633774 AGGATGTGTGAACGACCTCT 58.366 50.000 0.00 0.00 0.00 3.69
4818 5943 2.457366 AAGGATGTGTGAACGACCTC 57.543 50.000 0.00 0.00 0.00 3.85
4819 5944 2.930826 AAAGGATGTGTGAACGACCT 57.069 45.000 0.00 0.00 0.00 3.85
4820 5945 3.982576 AAAAAGGATGTGTGAACGACC 57.017 42.857 0.00 0.00 0.00 4.79
4821 5946 4.273969 TGGTAAAAAGGATGTGTGAACGAC 59.726 41.667 0.00 0.00 0.00 4.34
4822 5947 4.273969 GTGGTAAAAAGGATGTGTGAACGA 59.726 41.667 0.00 0.00 0.00 3.85
4823 5948 4.035792 TGTGGTAAAAAGGATGTGTGAACG 59.964 41.667 0.00 0.00 0.00 3.95
4824 5949 5.163602 TGTGTGGTAAAAAGGATGTGTGAAC 60.164 40.000 0.00 0.00 0.00 3.18
4825 5950 4.950475 TGTGTGGTAAAAAGGATGTGTGAA 59.050 37.500 0.00 0.00 0.00 3.18
4826 5951 4.527944 TGTGTGGTAAAAAGGATGTGTGA 58.472 39.130 0.00 0.00 0.00 3.58
4827 5952 4.578516 TCTGTGTGGTAAAAAGGATGTGTG 59.421 41.667 0.00 0.00 0.00 3.82
4828 5953 4.787551 TCTGTGTGGTAAAAAGGATGTGT 58.212 39.130 0.00 0.00 0.00 3.72
4829 5954 4.216257 CCTCTGTGTGGTAAAAAGGATGTG 59.784 45.833 0.00 0.00 0.00 3.21
4830 5955 4.398319 CCTCTGTGTGGTAAAAAGGATGT 58.602 43.478 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.