Multiple sequence alignment - TraesCS7A01G007000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G007000 chr7A 100.000 4640 0 0 1 4640 3284302 3288941 0.000000e+00 8569.0
1 TraesCS7A01G007000 chr7A 95.498 1688 48 2 2957 4640 698787504 698785841 0.000000e+00 2671.0
2 TraesCS7A01G007000 chr7A 95.716 1167 45 2 3479 4640 717886538 717885372 0.000000e+00 1873.0
3 TraesCS7A01G007000 chr7A 85.276 489 62 6 2478 2957 2121683 2121196 3.220000e-136 496.0
4 TraesCS7A01G007000 chr6A 95.438 1688 43 2 2957 4640 4407630 4405973 0.000000e+00 2660.0
5 TraesCS7A01G007000 chr6A 97.387 1148 26 1 3497 4640 613923691 613922544 0.000000e+00 1951.0
6 TraesCS7A01G007000 chr6A 97.632 549 13 0 2956 3504 30415665 30415117 0.000000e+00 942.0
7 TraesCS7A01G007000 chr6A 85.027 187 27 1 1 187 29303578 29303763 6.130000e-44 189.0
8 TraesCS7A01G007000 chr3A 95.083 1688 58 3 2957 4640 719554926 719553260 0.000000e+00 2634.0
9 TraesCS7A01G007000 chr3A 93.930 1697 58 8 2957 4640 7903230 7904894 0.000000e+00 2521.0
10 TraesCS7A01G007000 chr3A 97.127 557 14 1 2954 3508 37455014 37454458 0.000000e+00 939.0
11 TraesCS7A01G007000 chr2A 94.790 1689 58 8 2957 4640 2913531 2911868 0.000000e+00 2604.0
12 TraesCS7A01G007000 chr2A 97.461 1142 25 1 3503 4640 732000803 731999662 0.000000e+00 1945.0
13 TraesCS7A01G007000 chr2A 97.120 1146 29 1 3499 4640 773683345 773682200 0.000000e+00 1930.0
14 TraesCS7A01G007000 chr2A 96.951 1148 31 2 3497 4640 751554923 751556070 0.000000e+00 1923.0
15 TraesCS7A01G007000 chr2A 96.768 557 18 0 2954 3510 687093429 687093985 0.000000e+00 929.0
16 TraesCS7A01G007000 chr1A 94.520 1697 52 7 2957 4640 31174411 31172743 0.000000e+00 2580.0
17 TraesCS7A01G007000 chr1A 93.013 229 13 1 1 226 403624892 403625120 9.620000e-87 331.0
18 TraesCS7A01G007000 chr1A 94.382 178 8 1 1 178 20459008 20459183 5.920000e-69 272.0
19 TraesCS7A01G007000 chr1B 93.916 1693 66 12 2957 4640 677606736 677608400 0.000000e+00 2521.0
20 TraesCS7A01G007000 chr1B 91.339 254 19 1 1 254 309932558 309932308 1.240000e-90 344.0
21 TraesCS7A01G007000 chr1B 87.647 170 11 2 64 223 32092805 32092636 6.130000e-44 189.0
22 TraesCS7A01G007000 chr5A 94.877 1620 58 6 3027 4640 450193957 450192357 0.000000e+00 2508.0
23 TraesCS7A01G007000 chr3B 92.270 1229 46 19 3200 4408 1256620 1255421 0.000000e+00 1698.0
24 TraesCS7A01G007000 chr4A 84.828 1193 101 32 349 1515 739642238 739643376 0.000000e+00 1127.0
25 TraesCS7A01G007000 chr4A 84.622 1203 100 34 349 1515 742047361 742048514 0.000000e+00 1118.0
26 TraesCS7A01G007000 chr4A 88.644 907 77 11 630 1516 739860370 739861270 0.000000e+00 1081.0
27 TraesCS7A01G007000 chr4A 87.652 907 76 14 630 1516 740566165 740567055 0.000000e+00 1022.0
28 TraesCS7A01G007000 chr4A 89.737 799 66 12 2173 2957 739862360 739863156 0.000000e+00 1007.0
29 TraesCS7A01G007000 chr4A 87.442 868 92 10 2044 2899 740568155 740569017 0.000000e+00 983.0
30 TraesCS7A01G007000 chr4A 87.702 805 67 14 738 1524 741587948 741588738 0.000000e+00 909.0
31 TraesCS7A01G007000 chr4A 87.218 798 65 15 741 1515 741491489 741490706 0.000000e+00 874.0
32 TraesCS7A01G007000 chr4A 86.800 803 70 11 726 1515 740023006 740022227 0.000000e+00 863.0
33 TraesCS7A01G007000 chr4A 89.761 586 53 3 984 1562 740268862 740269447 0.000000e+00 743.0
34 TraesCS7A01G007000 chr4A 89.420 586 55 3 984 1562 740346267 740346852 0.000000e+00 732.0
35 TraesCS7A01G007000 chr4A 89.438 587 51 6 984 1562 740303015 740303598 0.000000e+00 730.0
36 TraesCS7A01G007000 chr4A 90.323 558 44 6 984 1531 740926794 740927351 0.000000e+00 723.0
37 TraesCS7A01G007000 chr4A 89.189 555 54 4 1984 2535 740927719 740928270 0.000000e+00 688.0
38 TraesCS7A01G007000 chr4A 92.857 350 21 3 442 787 741587603 741587952 5.360000e-139 505.0
39 TraesCS7A01G007000 chr4A 93.798 258 12 3 534 787 741491745 741491488 7.280000e-103 385.0
40 TraesCS7A01G007000 chr4A 89.542 306 26 5 2368 2668 742130373 742130677 2.620000e-102 383.0
41 TraesCS7A01G007000 chr4A 89.199 287 20 3 1703 1985 740927361 740927640 9.560000e-92 348.0
42 TraesCS7A01G007000 chr4A 92.593 162 12 0 349 510 739859613 739859774 2.790000e-57 233.0
43 TraesCS7A01G007000 chr4A 92.593 162 12 0 349 510 740565386 740565547 2.790000e-57 233.0
44 TraesCS7A01G007000 chr4A 91.358 162 14 0 349 510 740024301 740024140 6.040000e-54 222.0
45 TraesCS7A01G007000 chr4A 86.935 199 21 4 349 543 741494269 741494072 7.820000e-53 219.0
46 TraesCS7A01G007000 chr4A 89.759 166 15 1 2115 2278 742130211 742130376 1.310000e-50 211.0
47 TraesCS7A01G007000 chr4A 92.969 128 3 3 613 734 740023753 740023626 1.030000e-41 182.0
48 TraesCS7A01G007000 chr4A 85.276 163 18 4 1567 1723 739861559 739861721 3.710000e-36 163.0
49 TraesCS7A01G007000 chr4A 85.276 163 18 4 1567 1723 740567549 740567711 3.710000e-36 163.0
50 TraesCS7A01G007000 chr4A 87.313 134 17 0 2044 2177 739862165 739862298 2.240000e-33 154.0
51 TraesCS7A01G007000 chr4A 77.953 254 30 13 1612 1850 740567140 740567382 8.100000e-28 135.0
52 TraesCS7A01G007000 chr4A 96.226 53 1 1 1675 1726 740567239 740567291 8.270000e-13 86.1
53 TraesCS7A01G007000 chr5B 89.344 854 47 19 2956 3787 571213910 571214741 0.000000e+00 1033.0
54 TraesCS7A01G007000 chrUn 97.138 559 14 1 2956 3512 267682943 267683501 0.000000e+00 942.0
55 TraesCS7A01G007000 chr7D 88.560 743 58 14 2217 2957 3900439 3901156 0.000000e+00 876.0
56 TraesCS7A01G007000 chr7D 89.456 588 40 5 990 1565 3794272 3793695 0.000000e+00 723.0
57 TraesCS7A01G007000 chr7D 89.655 522 45 2 990 1502 2359817 2359296 0.000000e+00 656.0
58 TraesCS7A01G007000 chr7D 86.282 554 52 9 990 1519 3640465 3639912 8.650000e-162 580.0
59 TraesCS7A01G007000 chr7D 85.444 529 69 4 1042 1563 2611915 2611388 1.140000e-150 544.0
60 TraesCS7A01G007000 chr7D 91.880 234 17 2 1 234 549792695 549792926 4.480000e-85 326.0
61 TraesCS7A01G007000 chr7D 84.918 305 23 8 1563 1866 3793663 3793381 2.110000e-73 287.0
62 TraesCS7A01G007000 chr7D 90.179 112 10 1 2044 2155 3900319 3900429 1.350000e-30 145.0
63 TraesCS7A01G007000 chr3D 90.598 234 20 2 1 234 572216125 572216356 4.510000e-80 309.0
64 TraesCS7A01G007000 chr2D 90.598 234 20 2 1 234 116794601 116794832 4.510000e-80 309.0
65 TraesCS7A01G007000 chr4D 88.034 234 26 2 1 234 507100130 507099899 4.570000e-70 276.0
66 TraesCS7A01G007000 chr1D 80.451 133 21 2 1616 1743 32534445 32534577 3.820000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G007000 chr7A 3284302 3288941 4639 False 8569.000000 8569 100.000000 1 4640 1 chr7A.!!$F1 4639
1 TraesCS7A01G007000 chr7A 698785841 698787504 1663 True 2671.000000 2671 95.498000 2957 4640 1 chr7A.!!$R2 1683
2 TraesCS7A01G007000 chr7A 717885372 717886538 1166 True 1873.000000 1873 95.716000 3479 4640 1 chr7A.!!$R3 1161
3 TraesCS7A01G007000 chr6A 4405973 4407630 1657 True 2660.000000 2660 95.438000 2957 4640 1 chr6A.!!$R1 1683
4 TraesCS7A01G007000 chr6A 613922544 613923691 1147 True 1951.000000 1951 97.387000 3497 4640 1 chr6A.!!$R3 1143
5 TraesCS7A01G007000 chr6A 30415117 30415665 548 True 942.000000 942 97.632000 2956 3504 1 chr6A.!!$R2 548
6 TraesCS7A01G007000 chr3A 719553260 719554926 1666 True 2634.000000 2634 95.083000 2957 4640 1 chr3A.!!$R2 1683
7 TraesCS7A01G007000 chr3A 7903230 7904894 1664 False 2521.000000 2521 93.930000 2957 4640 1 chr3A.!!$F1 1683
8 TraesCS7A01G007000 chr3A 37454458 37455014 556 True 939.000000 939 97.127000 2954 3508 1 chr3A.!!$R1 554
9 TraesCS7A01G007000 chr2A 2911868 2913531 1663 True 2604.000000 2604 94.790000 2957 4640 1 chr2A.!!$R1 1683
10 TraesCS7A01G007000 chr2A 731999662 732000803 1141 True 1945.000000 1945 97.461000 3503 4640 1 chr2A.!!$R2 1137
11 TraesCS7A01G007000 chr2A 773682200 773683345 1145 True 1930.000000 1930 97.120000 3499 4640 1 chr2A.!!$R3 1141
12 TraesCS7A01G007000 chr2A 751554923 751556070 1147 False 1923.000000 1923 96.951000 3497 4640 1 chr2A.!!$F2 1143
13 TraesCS7A01G007000 chr2A 687093429 687093985 556 False 929.000000 929 96.768000 2954 3510 1 chr2A.!!$F1 556
14 TraesCS7A01G007000 chr1A 31172743 31174411 1668 True 2580.000000 2580 94.520000 2957 4640 1 chr1A.!!$R1 1683
15 TraesCS7A01G007000 chr1B 677606736 677608400 1664 False 2521.000000 2521 93.916000 2957 4640 1 chr1B.!!$F1 1683
16 TraesCS7A01G007000 chr5A 450192357 450193957 1600 True 2508.000000 2508 94.877000 3027 4640 1 chr5A.!!$R1 1613
17 TraesCS7A01G007000 chr3B 1255421 1256620 1199 True 1698.000000 1698 92.270000 3200 4408 1 chr3B.!!$R1 1208
18 TraesCS7A01G007000 chr4A 739642238 739643376 1138 False 1127.000000 1127 84.828000 349 1515 1 chr4A.!!$F1 1166
19 TraesCS7A01G007000 chr4A 742047361 742048514 1153 False 1118.000000 1118 84.622000 349 1515 1 chr4A.!!$F5 1166
20 TraesCS7A01G007000 chr4A 740268862 740269447 585 False 743.000000 743 89.761000 984 1562 1 chr4A.!!$F2 578
21 TraesCS7A01G007000 chr4A 740346267 740346852 585 False 732.000000 732 89.420000 984 1562 1 chr4A.!!$F4 578
22 TraesCS7A01G007000 chr4A 740303015 740303598 583 False 730.000000 730 89.438000 984 1562 1 chr4A.!!$F3 578
23 TraesCS7A01G007000 chr4A 741587603 741588738 1135 False 707.000000 909 90.279500 442 1524 2 chr4A.!!$F9 1082
24 TraesCS7A01G007000 chr4A 740926794 740928270 1476 False 586.333333 723 89.570333 984 2535 3 chr4A.!!$F8 1551
25 TraesCS7A01G007000 chr4A 739859613 739863156 3543 False 527.600000 1081 88.712600 349 2957 5 chr4A.!!$F6 2608
26 TraesCS7A01G007000 chr4A 741490706 741494269 3563 True 492.666667 874 89.317000 349 1515 3 chr4A.!!$R2 1166
27 TraesCS7A01G007000 chr4A 740565386 740569017 3631 False 437.016667 1022 87.857000 349 2899 6 chr4A.!!$F7 2550
28 TraesCS7A01G007000 chr4A 740022227 740024301 2074 True 422.333333 863 90.375667 349 1515 3 chr4A.!!$R1 1166
29 TraesCS7A01G007000 chr5B 571213910 571214741 831 False 1033.000000 1033 89.344000 2956 3787 1 chr5B.!!$F1 831
30 TraesCS7A01G007000 chrUn 267682943 267683501 558 False 942.000000 942 97.138000 2956 3512 1 chrUn.!!$F1 556
31 TraesCS7A01G007000 chr7D 2359296 2359817 521 True 656.000000 656 89.655000 990 1502 1 chr7D.!!$R1 512
32 TraesCS7A01G007000 chr7D 3639912 3640465 553 True 580.000000 580 86.282000 990 1519 1 chr7D.!!$R3 529
33 TraesCS7A01G007000 chr7D 2611388 2611915 527 True 544.000000 544 85.444000 1042 1563 1 chr7D.!!$R2 521
34 TraesCS7A01G007000 chr7D 3900319 3901156 837 False 510.500000 876 89.369500 2044 2957 2 chr7D.!!$F2 913
35 TraesCS7A01G007000 chr7D 3793381 3794272 891 True 505.000000 723 87.187000 990 1866 2 chr7D.!!$R4 876

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.032678 ACGATCTCGGCCACATCATC 59.967 55.0 2.24 0.00 44.95 2.92 F
152 153 0.032815 GTCCGCTAGAGCCCAGAATC 59.967 60.0 0.00 0.00 37.91 2.52 F
158 159 0.104934 TAGAGCCCAGAATCTCCCCC 60.105 60.0 0.00 0.00 0.00 5.40 F
335 336 0.106519 CTCCATTAGGGCAAGGTGGG 60.107 60.0 0.00 0.00 36.21 4.61 F
345 346 0.107459 GCAAGGTGGGGCAAAAACAA 60.107 50.0 0.00 0.00 0.00 2.83 F
988 4900 0.179100 CCGTCACTCATCTGCGGATT 60.179 55.0 4.93 0.00 44.57 3.01 F
2855 7611 0.249489 CGTGGAAGGCCCTATCTTCG 60.249 60.0 0.00 1.86 40.95 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 6145 0.477204 CCATCCCATGACCAGAGCAT 59.523 55.0 0.00 0.00 0.00 3.79 R
1932 6595 0.824595 ATGCACCAAGACAGCAAGCA 60.825 50.0 0.00 0.00 42.15 3.91 R
2013 6756 1.387539 GCTGCCAGAGATTTCTTCCC 58.612 55.0 0.00 0.00 0.00 3.97 R
2251 6996 0.447801 CGCAACTTCGCTAAGGCATT 59.552 50.0 2.75 0.00 37.01 3.56 R
2261 7006 1.566018 GAGTCAACCCCGCAACTTCG 61.566 60.0 0.00 0.00 0.00 3.79 R
2871 7627 0.035630 ACTGCCCTCTTCATCACTGC 60.036 55.0 0.00 0.00 0.00 4.40 R
4603 9911 0.846693 GAACCCATGGCCAGGATAGT 59.153 55.0 21.32 10.49 0.00 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.501128 CCACGATCTCGGCCACAT 59.499 61.111 2.24 0.00 44.95 3.21
18 19 1.592669 CCACGATCTCGGCCACATC 60.593 63.158 2.24 0.00 44.95 3.06
19 20 1.141665 CACGATCTCGGCCACATCA 59.858 57.895 2.24 0.00 44.95 3.07
20 21 0.249615 CACGATCTCGGCCACATCAT 60.250 55.000 2.24 0.00 44.95 2.45
21 22 0.032678 ACGATCTCGGCCACATCATC 59.967 55.000 2.24 0.00 44.95 2.92
22 23 0.668706 CGATCTCGGCCACATCATCC 60.669 60.000 2.24 0.00 35.37 3.51
23 24 0.683973 GATCTCGGCCACATCATCCT 59.316 55.000 2.24 0.00 0.00 3.24
24 25 0.683973 ATCTCGGCCACATCATCCTC 59.316 55.000 2.24 0.00 0.00 3.71
25 26 0.687427 TCTCGGCCACATCATCCTCA 60.687 55.000 2.24 0.00 0.00 3.86
26 27 0.395686 CTCGGCCACATCATCCTCAT 59.604 55.000 2.24 0.00 0.00 2.90
27 28 0.394192 TCGGCCACATCATCCTCATC 59.606 55.000 2.24 0.00 0.00 2.92
28 29 0.947660 CGGCCACATCATCCTCATCG 60.948 60.000 2.24 0.00 0.00 3.84
29 30 0.107456 GGCCACATCATCCTCATCGT 59.893 55.000 0.00 0.00 0.00 3.73
30 31 1.344438 GGCCACATCATCCTCATCGTA 59.656 52.381 0.00 0.00 0.00 3.43
31 32 2.611473 GGCCACATCATCCTCATCGTAG 60.611 54.545 0.00 0.00 0.00 3.51
32 33 2.611473 GCCACATCATCCTCATCGTAGG 60.611 54.545 0.00 0.00 38.06 3.18
33 34 2.611473 CCACATCATCCTCATCGTAGGC 60.611 54.545 0.00 0.00 36.51 3.93
34 35 2.036346 CACATCATCCTCATCGTAGGCA 59.964 50.000 0.00 0.00 36.51 4.75
35 36 2.036475 ACATCATCCTCATCGTAGGCAC 59.964 50.000 0.00 0.00 36.51 5.01
49 50 2.629002 GGCACGAGAAAAAGCCTCA 58.371 52.632 0.00 0.00 43.70 3.86
50 51 0.238553 GGCACGAGAAAAAGCCTCAC 59.761 55.000 0.00 0.00 43.70 3.51
51 52 0.944386 GCACGAGAAAAAGCCTCACA 59.056 50.000 0.00 0.00 0.00 3.58
52 53 1.069636 GCACGAGAAAAAGCCTCACAG 60.070 52.381 0.00 0.00 0.00 3.66
53 54 2.483876 CACGAGAAAAAGCCTCACAGA 58.516 47.619 0.00 0.00 0.00 3.41
54 55 3.070018 CACGAGAAAAAGCCTCACAGAT 58.930 45.455 0.00 0.00 0.00 2.90
55 56 3.499918 CACGAGAAAAAGCCTCACAGATT 59.500 43.478 0.00 0.00 0.00 2.40
56 57 4.690748 CACGAGAAAAAGCCTCACAGATTA 59.309 41.667 0.00 0.00 0.00 1.75
57 58 5.352569 CACGAGAAAAAGCCTCACAGATTAT 59.647 40.000 0.00 0.00 0.00 1.28
58 59 6.535150 CACGAGAAAAAGCCTCACAGATTATA 59.465 38.462 0.00 0.00 0.00 0.98
59 60 7.225538 CACGAGAAAAAGCCTCACAGATTATAT 59.774 37.037 0.00 0.00 0.00 0.86
60 61 7.439655 ACGAGAAAAAGCCTCACAGATTATATC 59.560 37.037 0.00 0.00 0.00 1.63
61 62 7.358765 CGAGAAAAAGCCTCACAGATTATATCG 60.359 40.741 0.00 0.00 0.00 2.92
62 63 6.708054 AGAAAAAGCCTCACAGATTATATCGG 59.292 38.462 0.00 0.00 0.00 4.18
63 64 5.808366 AAAGCCTCACAGATTATATCGGA 57.192 39.130 0.00 0.00 0.00 4.55
64 65 5.398603 AAGCCTCACAGATTATATCGGAG 57.601 43.478 0.00 0.00 0.00 4.63
65 66 3.766591 AGCCTCACAGATTATATCGGAGG 59.233 47.826 14.95 14.95 43.53 4.30
66 67 3.118956 GCCTCACAGATTATATCGGAGGG 60.119 52.174 18.15 3.48 42.25 4.30
67 68 4.344978 CCTCACAGATTATATCGGAGGGA 58.655 47.826 12.95 1.70 40.30 4.20
68 69 4.400884 CCTCACAGATTATATCGGAGGGAG 59.599 50.000 12.95 8.52 40.30 4.30
69 70 4.999310 TCACAGATTATATCGGAGGGAGT 58.001 43.478 0.00 0.00 0.00 3.85
70 71 6.135819 TCACAGATTATATCGGAGGGAGTA 57.864 41.667 0.00 0.00 0.00 2.59
71 72 6.181190 TCACAGATTATATCGGAGGGAGTAG 58.819 44.000 0.00 0.00 0.00 2.57
72 73 5.358442 CACAGATTATATCGGAGGGAGTAGG 59.642 48.000 0.00 0.00 0.00 3.18
73 74 4.339814 CAGATTATATCGGAGGGAGTAGGC 59.660 50.000 0.00 0.00 0.00 3.93
74 75 2.414994 TATATCGGAGGGAGTAGGCG 57.585 55.000 0.00 0.00 0.00 5.52
75 76 0.697079 ATATCGGAGGGAGTAGGCGA 59.303 55.000 0.00 0.00 0.00 5.54
76 77 0.036448 TATCGGAGGGAGTAGGCGAG 59.964 60.000 0.00 0.00 0.00 5.03
77 78 1.997256 ATCGGAGGGAGTAGGCGAGT 61.997 60.000 0.00 0.00 0.00 4.18
78 79 1.147824 CGGAGGGAGTAGGCGAGTA 59.852 63.158 0.00 0.00 0.00 2.59
79 80 0.885596 CGGAGGGAGTAGGCGAGTAG 60.886 65.000 0.00 0.00 0.00 2.57
80 81 0.183252 GGAGGGAGTAGGCGAGTAGT 59.817 60.000 0.00 0.00 0.00 2.73
81 82 1.596603 GAGGGAGTAGGCGAGTAGTC 58.403 60.000 0.00 0.00 0.00 2.59
82 83 0.183252 AGGGAGTAGGCGAGTAGTCC 59.817 60.000 9.01 9.01 40.58 3.85
83 84 1.165284 GGGAGTAGGCGAGTAGTCCG 61.165 65.000 10.61 0.00 41.77 4.79
84 85 0.463474 GGAGTAGGCGAGTAGTCCGT 60.463 60.000 3.34 0.00 33.69 4.69
85 86 0.936600 GAGTAGGCGAGTAGTCCGTC 59.063 60.000 0.00 0.00 0.00 4.79
86 87 0.809241 AGTAGGCGAGTAGTCCGTCG 60.809 60.000 0.00 0.00 36.66 5.12
87 88 0.807667 GTAGGCGAGTAGTCCGTCGA 60.808 60.000 0.00 0.00 38.50 4.20
88 89 0.529337 TAGGCGAGTAGTCCGTCGAG 60.529 60.000 0.00 0.00 38.50 4.04
89 90 2.023041 GCGAGTAGTCCGTCGAGC 59.977 66.667 0.00 0.00 38.50 5.03
90 91 2.708255 CGAGTAGTCCGTCGAGCC 59.292 66.667 0.00 0.00 38.50 4.70
91 92 2.708255 GAGTAGTCCGTCGAGCCG 59.292 66.667 0.00 0.00 0.00 5.52
92 93 3.452024 GAGTAGTCCGTCGAGCCGC 62.452 68.421 0.00 0.00 0.00 6.53
93 94 4.549516 GTAGTCCGTCGAGCCGCC 62.550 72.222 0.00 0.00 0.00 6.13
117 118 4.570663 CCCGCCGTCGTCCTCATC 62.571 72.222 0.00 0.00 0.00 2.92
118 119 3.822192 CCGCCGTCGTCCTCATCA 61.822 66.667 0.00 0.00 0.00 3.07
119 120 2.413351 CGCCGTCGTCCTCATCAT 59.587 61.111 0.00 0.00 0.00 2.45
120 121 1.658717 CGCCGTCGTCCTCATCATC 60.659 63.158 0.00 0.00 0.00 2.92
121 122 1.736586 GCCGTCGTCCTCATCATCT 59.263 57.895 0.00 0.00 0.00 2.90
122 123 0.318275 GCCGTCGTCCTCATCATCTC 60.318 60.000 0.00 0.00 0.00 2.75
123 124 0.312416 CCGTCGTCCTCATCATCTCC 59.688 60.000 0.00 0.00 0.00 3.71
124 125 0.040870 CGTCGTCCTCATCATCTCCG 60.041 60.000 0.00 0.00 0.00 4.63
125 126 0.318275 GTCGTCCTCATCATCTCCGC 60.318 60.000 0.00 0.00 0.00 5.54
126 127 0.466372 TCGTCCTCATCATCTCCGCT 60.466 55.000 0.00 0.00 0.00 5.52
127 128 0.318529 CGTCCTCATCATCTCCGCTG 60.319 60.000 0.00 0.00 0.00 5.18
128 129 0.749649 GTCCTCATCATCTCCGCTGT 59.250 55.000 0.00 0.00 0.00 4.40
129 130 1.035923 TCCTCATCATCTCCGCTGTC 58.964 55.000 0.00 0.00 0.00 3.51
130 131 1.039068 CCTCATCATCTCCGCTGTCT 58.961 55.000 0.00 0.00 0.00 3.41
131 132 1.411977 CCTCATCATCTCCGCTGTCTT 59.588 52.381 0.00 0.00 0.00 3.01
132 133 2.545532 CCTCATCATCTCCGCTGTCTTC 60.546 54.545 0.00 0.00 0.00 2.87
133 134 1.066152 TCATCATCTCCGCTGTCTTCG 59.934 52.381 0.00 0.00 0.00 3.79
134 135 1.107114 ATCATCTCCGCTGTCTTCGT 58.893 50.000 0.00 0.00 0.00 3.85
135 136 0.452184 TCATCTCCGCTGTCTTCGTC 59.548 55.000 0.00 0.00 0.00 4.20
136 137 0.526524 CATCTCCGCTGTCTTCGTCC 60.527 60.000 0.00 0.00 0.00 4.79
137 138 1.994507 ATCTCCGCTGTCTTCGTCCG 61.995 60.000 0.00 0.00 0.00 4.79
138 139 4.415332 TCCGCTGTCTTCGTCCGC 62.415 66.667 0.00 0.00 0.00 5.54
139 140 4.421479 CCGCTGTCTTCGTCCGCT 62.421 66.667 0.00 0.00 0.00 5.52
140 141 2.483745 CGCTGTCTTCGTCCGCTA 59.516 61.111 0.00 0.00 0.00 4.26
141 142 1.583967 CGCTGTCTTCGTCCGCTAG 60.584 63.158 0.00 0.00 0.00 3.42
142 143 1.801332 GCTGTCTTCGTCCGCTAGA 59.199 57.895 0.00 0.00 0.00 2.43
143 144 0.248296 GCTGTCTTCGTCCGCTAGAG 60.248 60.000 0.00 0.00 0.00 2.43
144 145 0.248296 CTGTCTTCGTCCGCTAGAGC 60.248 60.000 0.00 0.00 37.78 4.09
145 146 1.064458 GTCTTCGTCCGCTAGAGCC 59.936 63.158 0.00 0.00 37.91 4.70
146 147 2.119655 TCTTCGTCCGCTAGAGCCC 61.120 63.158 0.00 0.00 37.91 5.19
147 148 2.361992 TTCGTCCGCTAGAGCCCA 60.362 61.111 0.00 0.00 37.91 5.36
148 149 2.343163 CTTCGTCCGCTAGAGCCCAG 62.343 65.000 0.00 0.00 37.91 4.45
149 150 2.829003 CGTCCGCTAGAGCCCAGA 60.829 66.667 0.00 0.00 37.91 3.86
150 151 2.415608 CGTCCGCTAGAGCCCAGAA 61.416 63.158 0.00 0.00 37.91 3.02
151 152 1.739338 CGTCCGCTAGAGCCCAGAAT 61.739 60.000 0.00 0.00 37.91 2.40
152 153 0.032815 GTCCGCTAGAGCCCAGAATC 59.967 60.000 0.00 0.00 37.91 2.52
153 154 0.105964 TCCGCTAGAGCCCAGAATCT 60.106 55.000 0.00 0.00 37.91 2.40
154 155 0.316841 CCGCTAGAGCCCAGAATCTC 59.683 60.000 0.00 0.00 37.91 2.75
155 156 0.316841 CGCTAGAGCCCAGAATCTCC 59.683 60.000 0.00 0.00 37.91 3.71
156 157 0.684535 GCTAGAGCCCAGAATCTCCC 59.315 60.000 0.00 0.00 34.31 4.30
157 158 1.347062 CTAGAGCCCAGAATCTCCCC 58.653 60.000 0.00 0.00 0.00 4.81
158 159 0.104934 TAGAGCCCAGAATCTCCCCC 60.105 60.000 0.00 0.00 0.00 5.40
178 179 3.917760 CCCCTCTCCGGCGATCAC 61.918 72.222 9.30 0.00 0.00 3.06
179 180 3.917760 CCCTCTCCGGCGATCACC 61.918 72.222 9.30 0.00 0.00 4.02
180 181 3.147595 CCTCTCCGGCGATCACCA 61.148 66.667 9.30 0.00 0.00 4.17
181 182 2.415010 CTCTCCGGCGATCACCAG 59.585 66.667 9.30 0.00 0.00 4.00
182 183 3.144120 CTCTCCGGCGATCACCAGG 62.144 68.421 9.30 2.71 0.00 4.45
183 184 4.227134 CTCCGGCGATCACCAGGG 62.227 72.222 9.30 0.00 0.00 4.45
189 190 3.770040 CGATCACCAGGGGCGTCA 61.770 66.667 0.00 0.00 0.00 4.35
190 191 2.187946 GATCACCAGGGGCGTCAG 59.812 66.667 0.00 0.00 0.00 3.51
191 192 4.101448 ATCACCAGGGGCGTCAGC 62.101 66.667 0.00 0.00 44.18 4.26
216 217 4.324991 GGCGTCAAAGACCCCGGT 62.325 66.667 0.00 0.00 0.00 5.28
217 218 3.047877 GCGTCAAAGACCCCGGTG 61.048 66.667 0.00 0.00 0.00 4.94
218 219 3.047877 CGTCAAAGACCCCGGTGC 61.048 66.667 0.00 0.00 0.00 5.01
219 220 2.671963 GTCAAAGACCCCGGTGCC 60.672 66.667 0.00 0.00 0.00 5.01
220 221 3.172106 TCAAAGACCCCGGTGCCA 61.172 61.111 0.00 0.00 0.00 4.92
221 222 2.035626 CAAAGACCCCGGTGCCAT 59.964 61.111 0.00 0.00 0.00 4.40
222 223 2.046285 CAAAGACCCCGGTGCCATC 61.046 63.158 0.00 0.00 0.00 3.51
223 224 3.622060 AAAGACCCCGGTGCCATCG 62.622 63.158 0.00 0.00 0.00 3.84
225 226 4.832608 GACCCCGGTGCCATCGTC 62.833 72.222 0.00 0.00 0.00 4.20
231 232 3.272334 GGTGCCATCGTCGCCATC 61.272 66.667 0.00 0.00 34.38 3.51
232 233 3.630148 GTGCCATCGTCGCCATCG 61.630 66.667 0.00 0.00 0.00 3.84
239 240 4.647615 CGTCGCCATCGCCCCTAG 62.648 72.222 0.00 0.00 35.26 3.02
240 241 3.537874 GTCGCCATCGCCCCTAGT 61.538 66.667 0.00 0.00 35.26 2.57
241 242 3.224324 TCGCCATCGCCCCTAGTC 61.224 66.667 0.00 0.00 35.26 2.59
242 243 4.647615 CGCCATCGCCCCTAGTCG 62.648 72.222 0.00 0.00 0.00 4.18
243 244 4.971125 GCCATCGCCCCTAGTCGC 62.971 72.222 0.00 0.00 0.00 5.19
244 245 4.301027 CCATCGCCCCTAGTCGCC 62.301 72.222 0.00 0.00 0.00 5.54
245 246 4.301027 CATCGCCCCTAGTCGCCC 62.301 72.222 0.00 0.00 0.00 6.13
248 249 4.908487 CGCCCCTAGTCGCCCCTA 62.908 72.222 0.00 0.00 0.00 3.53
249 250 2.918276 GCCCCTAGTCGCCCCTAG 60.918 72.222 0.00 0.00 35.26 3.02
250 251 2.607602 CCCCTAGTCGCCCCTAGT 59.392 66.667 4.21 0.00 33.93 2.57
251 252 1.531128 CCCCTAGTCGCCCCTAGTC 60.531 68.421 4.21 0.00 33.93 2.59
252 253 1.229359 CCCTAGTCGCCCCTAGTCA 59.771 63.158 4.21 0.00 33.93 3.41
253 254 0.824182 CCCTAGTCGCCCCTAGTCAG 60.824 65.000 4.21 0.00 33.93 3.51
254 255 0.824182 CCTAGTCGCCCCTAGTCAGG 60.824 65.000 4.21 0.00 42.22 3.86
282 283 5.632244 CATCACATGGACAAATGAACTCA 57.368 39.130 0.00 0.00 0.00 3.41
283 284 5.637809 CATCACATGGACAAATGAACTCAG 58.362 41.667 0.00 0.00 0.00 3.35
284 285 4.971939 TCACATGGACAAATGAACTCAGA 58.028 39.130 0.00 0.00 0.00 3.27
285 286 5.375773 TCACATGGACAAATGAACTCAGAA 58.624 37.500 0.00 0.00 0.00 3.02
286 287 5.471116 TCACATGGACAAATGAACTCAGAAG 59.529 40.000 0.00 0.00 0.00 2.85
287 288 5.240183 CACATGGACAAATGAACTCAGAAGT 59.760 40.000 0.00 0.00 37.32 3.01
288 289 5.471456 ACATGGACAAATGAACTCAGAAGTC 59.529 40.000 0.00 0.00 33.48 3.01
289 290 5.034852 TGGACAAATGAACTCAGAAGTCA 57.965 39.130 0.00 0.00 33.48 3.41
290 291 5.624159 TGGACAAATGAACTCAGAAGTCAT 58.376 37.500 0.00 0.00 33.48 3.06
291 292 6.064060 TGGACAAATGAACTCAGAAGTCATT 58.936 36.000 3.35 3.35 36.07 2.57
292 293 6.205464 TGGACAAATGAACTCAGAAGTCATTC 59.795 38.462 8.15 0.00 34.76 2.67
293 294 6.205464 GGACAAATGAACTCAGAAGTCATTCA 59.795 38.462 8.15 0.00 37.94 2.57
294 295 6.963796 ACAAATGAACTCAGAAGTCATTCAC 58.036 36.000 8.15 0.00 37.94 3.18
295 296 6.543465 ACAAATGAACTCAGAAGTCATTCACA 59.457 34.615 8.15 0.00 37.94 3.58
296 297 6.551385 AATGAACTCAGAAGTCATTCACAC 57.449 37.500 3.35 0.00 37.94 3.82
297 298 4.380531 TGAACTCAGAAGTCATTCACACC 58.619 43.478 0.00 0.00 37.94 4.16
298 299 4.141733 TGAACTCAGAAGTCATTCACACCA 60.142 41.667 0.00 0.00 37.94 4.17
299 300 3.733337 ACTCAGAAGTCATTCACACCAC 58.267 45.455 0.00 0.00 37.94 4.16
300 301 3.134623 ACTCAGAAGTCATTCACACCACA 59.865 43.478 0.00 0.00 37.94 4.17
301 302 4.202398 ACTCAGAAGTCATTCACACCACAT 60.202 41.667 0.00 0.00 37.94 3.21
302 303 4.067192 TCAGAAGTCATTCACACCACATG 58.933 43.478 0.00 0.00 37.94 3.21
303 304 3.817084 CAGAAGTCATTCACACCACATGT 59.183 43.478 0.00 0.00 44.81 3.21
304 305 4.996758 CAGAAGTCATTCACACCACATGTA 59.003 41.667 0.00 0.00 40.64 2.29
305 306 4.997395 AGAAGTCATTCACACCACATGTAC 59.003 41.667 0.00 0.00 40.64 2.90
306 307 4.350368 AGTCATTCACACCACATGTACA 57.650 40.909 0.00 0.00 40.64 2.90
307 308 4.065088 AGTCATTCACACCACATGTACAC 58.935 43.478 0.00 0.00 40.64 2.90
308 309 3.188460 GTCATTCACACCACATGTACACC 59.812 47.826 0.00 0.00 40.64 4.16
309 310 2.264005 TTCACACCACATGTACACCC 57.736 50.000 0.00 0.00 40.64 4.61
310 311 0.398696 TCACACCACATGTACACCCC 59.601 55.000 0.00 0.00 40.64 4.95
311 312 0.400213 CACACCACATGTACACCCCT 59.600 55.000 0.00 0.00 40.64 4.79
312 313 1.626321 CACACCACATGTACACCCCTA 59.374 52.381 0.00 0.00 40.64 3.53
313 314 1.626825 ACACCACATGTACACCCCTAC 59.373 52.381 0.00 0.00 40.88 3.18
314 315 1.906574 CACCACATGTACACCCCTACT 59.093 52.381 0.00 0.00 0.00 2.57
315 316 3.101437 CACCACATGTACACCCCTACTA 58.899 50.000 0.00 0.00 0.00 1.82
316 317 3.102204 ACCACATGTACACCCCTACTAC 58.898 50.000 0.00 0.00 0.00 2.73
317 318 3.245875 ACCACATGTACACCCCTACTACT 60.246 47.826 0.00 0.00 0.00 2.57
318 319 3.383825 CCACATGTACACCCCTACTACTC 59.616 52.174 0.00 0.00 0.00 2.59
319 320 3.383825 CACATGTACACCCCTACTACTCC 59.616 52.174 0.00 0.00 0.00 3.85
320 321 3.012047 ACATGTACACCCCTACTACTCCA 59.988 47.826 0.00 0.00 0.00 3.86
321 322 4.223953 CATGTACACCCCTACTACTCCAT 58.776 47.826 0.00 0.00 0.00 3.41
322 323 4.341863 TGTACACCCCTACTACTCCATT 57.658 45.455 0.00 0.00 0.00 3.16
323 324 5.470755 TGTACACCCCTACTACTCCATTA 57.529 43.478 0.00 0.00 0.00 1.90
324 325 5.452255 TGTACACCCCTACTACTCCATTAG 58.548 45.833 0.00 0.00 0.00 1.73
325 326 3.924922 ACACCCCTACTACTCCATTAGG 58.075 50.000 0.00 0.00 33.35 2.69
328 329 2.972348 CCCTACTACTCCATTAGGGCA 58.028 52.381 0.00 0.00 44.47 5.36
329 330 3.314693 CCCTACTACTCCATTAGGGCAA 58.685 50.000 0.00 0.00 44.47 4.52
330 331 3.325135 CCCTACTACTCCATTAGGGCAAG 59.675 52.174 0.00 0.00 44.47 4.01
331 332 3.325135 CCTACTACTCCATTAGGGCAAGG 59.675 52.174 0.00 0.00 36.21 3.61
332 333 2.846950 ACTACTCCATTAGGGCAAGGT 58.153 47.619 0.00 0.00 36.21 3.50
333 334 2.505819 ACTACTCCATTAGGGCAAGGTG 59.494 50.000 0.00 0.00 36.21 4.00
334 335 0.625849 ACTCCATTAGGGCAAGGTGG 59.374 55.000 0.00 0.00 36.21 4.61
335 336 0.106519 CTCCATTAGGGCAAGGTGGG 60.107 60.000 0.00 0.00 36.21 4.61
336 337 1.076044 CCATTAGGGCAAGGTGGGG 60.076 63.158 0.00 0.00 0.00 4.96
337 338 1.758122 CATTAGGGCAAGGTGGGGC 60.758 63.158 0.00 0.00 0.00 5.80
338 339 2.245379 ATTAGGGCAAGGTGGGGCA 61.245 57.895 0.00 0.00 0.00 5.36
339 340 1.809939 ATTAGGGCAAGGTGGGGCAA 61.810 55.000 0.00 0.00 0.00 4.52
340 341 2.024983 TTAGGGCAAGGTGGGGCAAA 62.025 55.000 0.00 0.00 0.00 3.68
341 342 2.024983 TAGGGCAAGGTGGGGCAAAA 62.025 55.000 0.00 0.00 0.00 2.44
342 343 2.447714 GGGCAAGGTGGGGCAAAAA 61.448 57.895 0.00 0.00 0.00 1.94
343 344 1.227823 GGCAAGGTGGGGCAAAAAC 60.228 57.895 0.00 0.00 0.00 2.43
344 345 1.524482 GCAAGGTGGGGCAAAAACA 59.476 52.632 0.00 0.00 0.00 2.83
345 346 0.107459 GCAAGGTGGGGCAAAAACAA 60.107 50.000 0.00 0.00 0.00 2.83
346 347 1.476652 GCAAGGTGGGGCAAAAACAAT 60.477 47.619 0.00 0.00 0.00 2.71
347 348 2.224402 GCAAGGTGGGGCAAAAACAATA 60.224 45.455 0.00 0.00 0.00 1.90
418 425 9.946418 CTTTTTAAACAACGTAAAACCTGAAAG 57.054 29.630 0.00 0.00 31.78 2.62
461 468 2.476241 GGTAAGTTCGTAACCAACCACG 59.524 50.000 11.08 0.00 36.93 4.94
500 507 5.810525 ACCGAAGAAGATGAATAAAATGCG 58.189 37.500 0.00 0.00 0.00 4.73
501 508 5.354234 ACCGAAGAAGATGAATAAAATGCGT 59.646 36.000 0.00 0.00 0.00 5.24
524 531 1.298859 AAGCCCTTGCGACTTTAGCG 61.299 55.000 0.00 0.00 44.33 4.26
581 3346 3.928727 AACAGCATGAATGGTCTTGTG 57.071 42.857 0.00 0.00 39.69 3.33
705 3916 1.681229 TAGAGGGAAAATGGTGGCCT 58.319 50.000 3.32 0.00 0.00 5.19
829 4719 2.482721 AGCGTTTGAGGACGTAATTTGG 59.517 45.455 0.00 0.00 44.50 3.28
842 4742 6.436843 ACGTAATTTGGAAAGATAAGGCAG 57.563 37.500 0.00 0.00 0.00 4.85
843 4743 6.177610 ACGTAATTTGGAAAGATAAGGCAGA 58.822 36.000 0.00 0.00 0.00 4.26
844 4744 6.093633 ACGTAATTTGGAAAGATAAGGCAGAC 59.906 38.462 0.00 0.00 0.00 3.51
845 4745 6.093495 CGTAATTTGGAAAGATAAGGCAGACA 59.907 38.462 0.00 0.00 0.00 3.41
846 4746 6.521151 AATTTGGAAAGATAAGGCAGACAG 57.479 37.500 0.00 0.00 0.00 3.51
847 4747 3.634397 TGGAAAGATAAGGCAGACAGG 57.366 47.619 0.00 0.00 0.00 4.00
848 4748 2.293170 GGAAAGATAAGGCAGACAGGC 58.707 52.381 0.00 0.00 44.61 4.85
855 4755 2.280797 GGCAGACAGGCACGACAA 60.281 61.111 0.00 0.00 43.51 3.18
865 4765 1.082756 GCACGACAAAAGAGGCACG 60.083 57.895 0.00 0.00 0.00 5.34
871 4771 0.463654 ACAAAAGAGGCACGAGCACA 60.464 50.000 7.26 0.00 44.61 4.57
956 4868 1.893137 TCGCTTAGTCTTCTCTTGCCA 59.107 47.619 0.00 0.00 0.00 4.92
972 4884 1.889530 GCCAGAACTCTAGCCACCGT 61.890 60.000 0.00 0.00 0.00 4.83
988 4900 0.179100 CCGTCACTCATCTGCGGATT 60.179 55.000 4.93 0.00 44.57 3.01
1009 4922 1.151777 GCCACCGGACATGTATGACG 61.152 60.000 9.46 1.33 0.00 4.35
1059 4972 3.726144 AAGGAGGAGCTGCAGCCC 61.726 66.667 34.39 31.14 43.38 5.19
1066 4979 3.003173 AGCTGCAGCCCGAGGTTA 61.003 61.111 34.39 0.00 43.38 2.85
1076 4989 2.694109 AGCCCGAGGTTATTCTCTACAC 59.306 50.000 0.00 0.00 0.00 2.90
1077 4990 2.543238 GCCCGAGGTTATTCTCTACACG 60.543 54.545 0.00 0.00 0.00 4.49
1078 4991 2.034305 CCCGAGGTTATTCTCTACACGG 59.966 54.545 0.00 0.00 36.37 4.94
1079 4992 2.543238 CCGAGGTTATTCTCTACACGGC 60.543 54.545 0.00 0.00 32.49 5.68
1080 4993 2.728922 GAGGTTATTCTCTACACGGCG 58.271 52.381 4.80 4.80 0.00 6.46
1081 4994 2.097825 AGGTTATTCTCTACACGGCGT 58.902 47.619 6.77 6.77 0.00 5.68
1212 5152 1.005748 CCGCTGTGAGCTCAAGTCA 60.006 57.895 20.19 11.72 39.60 3.41
1302 5242 1.406069 CCTGACGATGTTAGGCAGCTT 60.406 52.381 0.00 0.00 43.20 3.74
1342 5282 3.137459 CTCTCCTCGACAGCGCCT 61.137 66.667 2.29 0.00 37.46 5.52
1374 5314 4.389576 GCCTTCGTGTGCCAAGCG 62.390 66.667 0.00 0.00 0.00 4.68
1462 5835 2.363683 GCATTGTTGAGAAGGAGGAGG 58.636 52.381 0.00 0.00 0.00 4.30
1463 5836 2.026822 GCATTGTTGAGAAGGAGGAGGA 60.027 50.000 0.00 0.00 0.00 3.71
1464 5837 3.604582 CATTGTTGAGAAGGAGGAGGAC 58.395 50.000 0.00 0.00 0.00 3.85
1502 5878 1.286553 TCCAACCCAAGGTGACACTTT 59.713 47.619 5.39 0.53 35.34 2.66
1516 5899 4.876107 GTGACACTTTGTTTCTCTCCTTCA 59.124 41.667 0.00 0.00 0.00 3.02
1524 5907 5.620738 TGTTTCTCTCCTTCATATCCCTG 57.379 43.478 0.00 0.00 0.00 4.45
1550 5933 9.642327 GTACTACAAAAAGAAAAGAAAAACCCA 57.358 29.630 0.00 0.00 0.00 4.51
1565 5949 7.116736 AGAAAAACCCAGAGACTGAACTTTTA 58.883 34.615 0.00 0.00 32.44 1.52
1593 6010 0.680921 AATGATGCACCCAACCCTCG 60.681 55.000 0.00 0.00 0.00 4.63
1608 6029 5.280011 CCAACCCTCGATTATGTTAGCCTAT 60.280 44.000 0.00 0.00 0.00 2.57
1617 6038 6.574465 CGATTATGTTAGCCTATACCCTGCTT 60.574 42.308 0.00 0.00 36.57 3.91
1661 6082 2.038387 ATAAACGGCCAGGACATGTC 57.962 50.000 17.91 17.91 0.00 3.06
1716 6138 8.591114 TCCTGTTAGTTAGTTAGCTGAATAGT 57.409 34.615 0.00 0.00 0.00 2.12
1717 6139 8.467598 TCCTGTTAGTTAGTTAGCTGAATAGTG 58.532 37.037 0.00 0.00 0.00 2.74
1718 6140 7.222999 CCTGTTAGTTAGTTAGCTGAATAGTGC 59.777 40.741 0.00 0.00 0.00 4.40
1719 6141 7.608153 TGTTAGTTAGTTAGCTGAATAGTGCA 58.392 34.615 0.00 0.00 0.00 4.57
1720 6142 7.759886 TGTTAGTTAGTTAGCTGAATAGTGCAG 59.240 37.037 0.00 0.00 36.47 4.41
1757 6417 4.789899 TGGCATGCCATGGTGATT 57.210 50.000 35.59 0.00 41.89 2.57
1769 6429 2.502510 GTGATTGCGGCAAGTGCG 60.503 61.111 21.11 0.00 43.26 5.34
1770 6430 4.403137 TGATTGCGGCAAGTGCGC 62.403 61.111 21.11 0.00 43.26 6.09
1771 6431 4.403137 GATTGCGGCAAGTGCGCA 62.403 61.111 21.11 5.66 44.16 6.09
1772 6432 4.705519 ATTGCGGCAAGTGCGCAC 62.706 61.111 32.79 32.79 44.96 5.34
1794 6454 1.801913 GCACACCTAGCTCACGTCG 60.802 63.158 0.00 0.00 0.00 5.12
1834 6494 0.755698 CAGGTAGGCTCGGCTTAGGA 60.756 60.000 0.00 0.00 0.00 2.94
1874 6537 2.358898 ACGACAGTGCAAATGAAGCTTT 59.641 40.909 0.00 0.00 34.17 3.51
1884 6547 4.376861 GCAAATGAAGCTTTATACATCGCG 59.623 41.667 3.88 0.00 0.00 5.87
1927 6590 6.096001 GCCACCTGAATCAGTTGAATAAATCT 59.904 38.462 9.46 0.00 0.00 2.40
1932 6595 7.123247 CCTGAATCAGTTGAATAAATCTGGGTT 59.877 37.037 9.63 0.00 0.00 4.11
1953 6616 0.388134 CTTGCTGTCTTGGTGCATGC 60.388 55.000 11.82 11.82 36.55 4.06
1970 6633 3.655486 CATGCTGTCCATTTCTTGCAAA 58.345 40.909 0.00 0.00 34.07 3.68
2025 6768 2.431057 TCTAGTGCCGGGAAGAAATCTC 59.569 50.000 2.18 0.00 0.00 2.75
2040 6783 1.760192 ATCTCTGGCAGCCATCAAAC 58.240 50.000 16.64 0.00 30.82 2.93
2042 6785 1.304381 TCTGGCAGCCATCAAACCC 60.304 57.895 16.64 0.00 30.82 4.11
2048 6791 1.671054 AGCCATCAAACCCGTCGTG 60.671 57.895 0.00 0.00 0.00 4.35
2052 6795 1.406341 CCATCAAACCCGTCGTGGTAT 60.406 52.381 5.92 0.00 37.76 2.73
2078 6821 1.830587 CTCTGCTACAGTGGTGGGCA 61.831 60.000 0.00 0.00 36.30 5.36
2093 6836 3.677648 GCATGGGCCATCCGCATC 61.678 66.667 18.16 0.00 44.38 3.91
2161 6904 7.566760 AAGAAAATCATTTTGGTTTTGGTCC 57.433 32.000 0.00 0.00 40.44 4.46
2169 6912 6.381420 TCATTTTGGTTTTGGTCCTTCTAACA 59.619 34.615 0.00 0.00 0.00 2.41
2261 7006 6.094881 TGGTAAAGAACATACAATGCCTTAGC 59.905 38.462 0.00 0.00 40.48 3.09
2270 7015 0.447801 AATGCCTTAGCGAAGTTGCG 59.552 50.000 5.81 0.00 44.31 4.85
2290 7035 3.737355 GCGGGGTTGACTCTAGAATGTAC 60.737 52.174 0.00 0.00 0.00 2.90
2430 7177 1.412079 AAACATTGGCCACAGCAGAA 58.588 45.000 3.88 0.00 42.56 3.02
2443 7190 2.993853 CAGAAGCCTCCACCTCCC 59.006 66.667 0.00 0.00 0.00 4.30
2445 7192 4.475135 GAAGCCTCCACCTCCCGC 62.475 72.222 0.00 0.00 0.00 6.13
2466 7213 3.704512 CATCGATCTCTCCTCAACACAG 58.295 50.000 0.00 0.00 0.00 3.66
2472 7219 3.566351 TCTCTCCTCAACACAGTTCTCA 58.434 45.455 0.00 0.00 0.00 3.27
2473 7220 3.571828 TCTCTCCTCAACACAGTTCTCAG 59.428 47.826 0.00 0.00 0.00 3.35
2582 7338 3.369892 GCAGTTGACCATAGTGGAGATGT 60.370 47.826 2.45 0.00 40.96 3.06
2587 7343 4.349365 TGACCATAGTGGAGATGTGTGTA 58.651 43.478 2.45 0.00 40.96 2.90
2595 7351 3.688185 GTGGAGATGTGTGTAGTCGAGTA 59.312 47.826 0.00 0.00 0.00 2.59
2621 7377 3.441496 ACGGCATCATGGCTATTTTTG 57.559 42.857 9.90 0.00 41.25 2.44
2647 7403 0.896479 TACCACTAGCCACGCTCACA 60.896 55.000 0.00 0.00 40.44 3.58
2651 7407 1.927174 CACTAGCCACGCTCACAATAC 59.073 52.381 0.00 0.00 40.44 1.89
2680 7436 8.800370 TGTGTCTAATTATCTATTTTGCACCA 57.200 30.769 0.00 0.00 0.00 4.17
2681 7437 8.892723 TGTGTCTAATTATCTATTTTGCACCAG 58.107 33.333 0.00 0.00 0.00 4.00
2761 7517 4.078630 AGGCTCCTTCTCTTTATCTCCTCT 60.079 45.833 0.00 0.00 0.00 3.69
2784 7540 0.301687 CACCATTGTCGATGCGCTAC 59.698 55.000 9.73 1.09 34.25 3.58
2785 7541 0.810031 ACCATTGTCGATGCGCTACC 60.810 55.000 9.73 0.00 34.25 3.18
2786 7542 1.559814 CATTGTCGATGCGCTACCG 59.440 57.895 9.73 9.68 37.57 4.02
2855 7611 0.249489 CGTGGAAGGCCCTATCTTCG 60.249 60.000 0.00 1.86 40.95 3.79
2887 7643 0.034670 AAGGCAGTGATGAAGAGGGC 60.035 55.000 0.00 0.00 0.00 5.19
2911 7667 2.266055 CCTCGGTGGGCTTCTGAC 59.734 66.667 0.00 0.00 0.00 3.51
2912 7668 2.286523 CCTCGGTGGGCTTCTGACT 61.287 63.158 0.00 0.00 0.00 3.41
2913 7669 0.970937 CCTCGGTGGGCTTCTGACTA 60.971 60.000 0.00 0.00 0.00 2.59
2914 7670 0.457851 CTCGGTGGGCTTCTGACTAG 59.542 60.000 0.00 0.00 0.00 2.57
2915 7671 0.251653 TCGGTGGGCTTCTGACTAGT 60.252 55.000 0.00 0.00 0.00 2.57
2916 7672 0.108615 CGGTGGGCTTCTGACTAGTG 60.109 60.000 0.00 0.00 0.00 2.74
2917 7673 0.391793 GGTGGGCTTCTGACTAGTGC 60.392 60.000 0.00 0.00 0.00 4.40
2918 7674 0.321671 GTGGGCTTCTGACTAGTGCA 59.678 55.000 0.00 0.00 0.00 4.57
2919 7675 0.321671 TGGGCTTCTGACTAGTGCAC 59.678 55.000 9.40 9.40 0.00 4.57
2920 7676 0.391793 GGGCTTCTGACTAGTGCACC 60.392 60.000 14.63 0.00 0.00 5.01
2921 7677 0.737715 GGCTTCTGACTAGTGCACCG 60.738 60.000 14.63 7.78 0.00 4.94
2922 7678 0.038159 GCTTCTGACTAGTGCACCGT 60.038 55.000 14.63 11.42 0.00 4.83
2923 7679 1.201647 GCTTCTGACTAGTGCACCGTA 59.798 52.381 14.63 0.00 0.00 4.02
2924 7680 2.732597 GCTTCTGACTAGTGCACCGTAG 60.733 54.545 14.63 12.28 0.00 3.51
2925 7681 0.809385 TCTGACTAGTGCACCGTAGC 59.191 55.000 14.63 6.87 0.00 3.58
2926 7682 0.526211 CTGACTAGTGCACCGTAGCA 59.474 55.000 14.63 10.69 43.35 3.49
2934 7690 0.595588 TGCACCGTAGCAACAAATGG 59.404 50.000 0.00 0.00 42.46 3.16
2935 7691 0.596082 GCACCGTAGCAACAAATGGT 59.404 50.000 0.00 0.00 43.54 3.55
2936 7692 1.807742 GCACCGTAGCAACAAATGGTA 59.192 47.619 0.00 0.00 40.93 3.25
2937 7693 2.159572 GCACCGTAGCAACAAATGGTAG 60.160 50.000 0.00 0.00 42.38 3.18
2938 7694 2.081462 ACCGTAGCAACAAATGGTAGC 58.919 47.619 0.00 0.00 42.38 3.58
2939 7695 2.290071 ACCGTAGCAACAAATGGTAGCT 60.290 45.455 0.00 0.00 42.38 3.32
2940 7696 2.351726 CCGTAGCAACAAATGGTAGCTC 59.648 50.000 0.00 0.00 42.38 4.09
2941 7697 3.000041 CGTAGCAACAAATGGTAGCTCA 59.000 45.455 0.00 0.00 42.38 4.26
2942 7698 3.181520 CGTAGCAACAAATGGTAGCTCAC 60.182 47.826 0.00 0.00 42.38 3.51
2951 7707 3.609798 GGTAGCTCACCCTACTCCA 57.390 57.895 0.00 0.00 42.07 3.86
2952 7708 2.089600 GGTAGCTCACCCTACTCCAT 57.910 55.000 0.00 0.00 42.07 3.41
3075 7831 0.103572 GCCGCCTTCATTAGTACCGA 59.896 55.000 0.00 0.00 0.00 4.69
3132 7888 1.755380 ACCGGTACTAATGAGAGTGGC 59.245 52.381 4.49 0.00 0.00 5.01
3135 7891 1.755380 GGTACTAATGAGAGTGGCGGT 59.245 52.381 0.00 0.00 0.00 5.68
3313 8084 2.490903 GAGCTCATCACACATTTTGCCT 59.509 45.455 9.40 0.00 0.00 4.75
3335 8106 8.203485 TGCCTAAAATTTGTCAAGATTTGAAGT 58.797 29.630 0.00 0.00 42.15 3.01
3343 8114 4.089361 GTCAAGATTTGAAGTCCCCCATT 58.911 43.478 0.00 0.00 42.15 3.16
3348 8119 4.713321 AGATTTGAAGTCCCCCATTCATTG 59.287 41.667 0.00 0.00 35.47 2.82
3457 8234 7.027874 TGTGAGTTTAGTAATTTGGGAGGAT 57.972 36.000 0.00 0.00 0.00 3.24
3458 8235 8.153221 TGTGAGTTTAGTAATTTGGGAGGATA 57.847 34.615 0.00 0.00 0.00 2.59
3459 8236 8.778059 TGTGAGTTTAGTAATTTGGGAGGATAT 58.222 33.333 0.00 0.00 0.00 1.63
3620 8663 3.849563 AGGTGTGGTTTACTTAGTGCA 57.150 42.857 0.00 0.00 0.00 4.57
3769 9010 9.899226 GTTACTCGTATAATTATCTTACCCGTT 57.101 33.333 0.00 0.00 0.00 4.44
3791 9032 7.790673 CCGTTCGTTGTTTGTTATACATATAGC 59.209 37.037 0.00 0.00 0.00 2.97
3814 9055 3.820557 CCATGGTTTTGATATCCGTCCT 58.179 45.455 2.57 0.00 0.00 3.85
3842 9083 4.141482 GGCCCTAGTCCTTGTTATGATTCA 60.141 45.833 0.00 0.00 0.00 2.57
4108 9353 6.944290 TCACAAGATGAAGATGGAGAAAATGT 59.056 34.615 0.00 0.00 33.02 2.71
4230 9475 8.803201 TCGTATTTGTTGTTGCATTTAAATGA 57.197 26.923 28.33 12.85 38.70 2.57
4467 9775 2.232696 TGTGCTCGCTGTAAGAATGGTA 59.767 45.455 0.00 0.00 34.07 3.25
4517 9825 0.035739 TCCACCTGTTTAAGTCCGGC 59.964 55.000 0.00 0.00 0.00 6.13
4603 9911 2.228059 AGAAGAAGAGGACGACGACAA 58.772 47.619 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.592669 GATGTGGCCGAGATCGTGG 60.593 63.158 0.00 2.19 37.74 4.94
1 2 0.249615 ATGATGTGGCCGAGATCGTG 60.250 55.000 0.00 0.00 37.74 4.35
3 4 0.668706 GGATGATGTGGCCGAGATCG 60.669 60.000 0.00 0.00 39.44 3.69
4 5 0.683973 AGGATGATGTGGCCGAGATC 59.316 55.000 0.00 1.75 0.00 2.75
5 6 0.683973 GAGGATGATGTGGCCGAGAT 59.316 55.000 0.00 0.00 0.00 2.75
6 7 0.687427 TGAGGATGATGTGGCCGAGA 60.687 55.000 0.00 0.00 0.00 4.04
7 8 0.395686 ATGAGGATGATGTGGCCGAG 59.604 55.000 0.00 0.00 0.00 4.63
8 9 0.394192 GATGAGGATGATGTGGCCGA 59.606 55.000 0.00 0.00 0.00 5.54
9 10 0.947660 CGATGAGGATGATGTGGCCG 60.948 60.000 0.00 0.00 0.00 6.13
10 11 0.107456 ACGATGAGGATGATGTGGCC 59.893 55.000 0.00 0.00 0.00 5.36
11 12 2.611473 CCTACGATGAGGATGATGTGGC 60.611 54.545 0.00 0.00 39.15 5.01
12 13 2.611473 GCCTACGATGAGGATGATGTGG 60.611 54.545 6.92 0.00 39.15 4.17
13 14 2.036346 TGCCTACGATGAGGATGATGTG 59.964 50.000 6.92 0.00 39.15 3.21
14 15 2.036475 GTGCCTACGATGAGGATGATGT 59.964 50.000 6.92 0.00 39.15 3.06
15 16 2.681706 GTGCCTACGATGAGGATGATG 58.318 52.381 6.92 0.00 39.15 3.07
31 32 0.238553 GTGAGGCTTTTTCTCGTGCC 59.761 55.000 0.00 0.00 45.21 5.01
32 33 0.944386 TGTGAGGCTTTTTCTCGTGC 59.056 50.000 0.00 0.00 34.19 5.34
33 34 2.483876 TCTGTGAGGCTTTTTCTCGTG 58.516 47.619 0.00 0.00 34.19 4.35
34 35 2.910688 TCTGTGAGGCTTTTTCTCGT 57.089 45.000 0.00 0.00 34.19 4.18
35 36 7.358765 CGATATAATCTGTGAGGCTTTTTCTCG 60.359 40.741 0.00 0.00 34.19 4.04
36 37 7.095439 CCGATATAATCTGTGAGGCTTTTTCTC 60.095 40.741 0.00 0.00 0.00 2.87
37 38 6.708054 CCGATATAATCTGTGAGGCTTTTTCT 59.292 38.462 0.00 0.00 0.00 2.52
38 39 6.706270 TCCGATATAATCTGTGAGGCTTTTTC 59.294 38.462 0.00 0.00 0.00 2.29
39 40 6.591935 TCCGATATAATCTGTGAGGCTTTTT 58.408 36.000 0.00 0.00 0.00 1.94
40 41 6.174720 TCCGATATAATCTGTGAGGCTTTT 57.825 37.500 0.00 0.00 0.00 2.27
41 42 5.279708 CCTCCGATATAATCTGTGAGGCTTT 60.280 44.000 0.00 0.00 32.32 3.51
42 43 4.221703 CCTCCGATATAATCTGTGAGGCTT 59.778 45.833 0.00 0.00 32.32 4.35
43 44 3.766591 CCTCCGATATAATCTGTGAGGCT 59.233 47.826 0.00 0.00 32.32 4.58
44 45 3.118956 CCCTCCGATATAATCTGTGAGGC 60.119 52.174 0.00 0.00 37.24 4.70
45 46 4.344978 TCCCTCCGATATAATCTGTGAGG 58.655 47.826 0.00 0.00 38.08 3.86
46 47 5.013547 ACTCCCTCCGATATAATCTGTGAG 58.986 45.833 0.00 0.00 0.00 3.51
47 48 4.999310 ACTCCCTCCGATATAATCTGTGA 58.001 43.478 0.00 0.00 0.00 3.58
48 49 5.358442 CCTACTCCCTCCGATATAATCTGTG 59.642 48.000 0.00 0.00 0.00 3.66
49 50 5.511363 CCTACTCCCTCCGATATAATCTGT 58.489 45.833 0.00 0.00 0.00 3.41
50 51 4.339814 GCCTACTCCCTCCGATATAATCTG 59.660 50.000 0.00 0.00 0.00 2.90
51 52 4.538738 GCCTACTCCCTCCGATATAATCT 58.461 47.826 0.00 0.00 0.00 2.40
52 53 3.315749 CGCCTACTCCCTCCGATATAATC 59.684 52.174 0.00 0.00 0.00 1.75
53 54 3.053842 TCGCCTACTCCCTCCGATATAAT 60.054 47.826 0.00 0.00 0.00 1.28
54 55 2.306805 TCGCCTACTCCCTCCGATATAA 59.693 50.000 0.00 0.00 0.00 0.98
55 56 1.911357 TCGCCTACTCCCTCCGATATA 59.089 52.381 0.00 0.00 0.00 0.86
56 57 0.697079 TCGCCTACTCCCTCCGATAT 59.303 55.000 0.00 0.00 0.00 1.63
57 58 0.036448 CTCGCCTACTCCCTCCGATA 59.964 60.000 0.00 0.00 0.00 2.92
58 59 1.228306 CTCGCCTACTCCCTCCGAT 60.228 63.158 0.00 0.00 0.00 4.18
59 60 1.340399 TACTCGCCTACTCCCTCCGA 61.340 60.000 0.00 0.00 0.00 4.55
60 61 0.885596 CTACTCGCCTACTCCCTCCG 60.886 65.000 0.00 0.00 0.00 4.63
61 62 0.183252 ACTACTCGCCTACTCCCTCC 59.817 60.000 0.00 0.00 0.00 4.30
62 63 1.596603 GACTACTCGCCTACTCCCTC 58.403 60.000 0.00 0.00 0.00 4.30
63 64 0.183252 GGACTACTCGCCTACTCCCT 59.817 60.000 0.00 0.00 0.00 4.20
64 65 1.165284 CGGACTACTCGCCTACTCCC 61.165 65.000 0.00 0.00 0.00 4.30
65 66 0.463474 ACGGACTACTCGCCTACTCC 60.463 60.000 0.00 0.00 0.00 3.85
66 67 0.936600 GACGGACTACTCGCCTACTC 59.063 60.000 0.00 0.00 0.00 2.59
67 68 0.809241 CGACGGACTACTCGCCTACT 60.809 60.000 0.00 0.00 0.00 2.57
68 69 0.807667 TCGACGGACTACTCGCCTAC 60.808 60.000 0.00 0.00 0.00 3.18
69 70 0.529337 CTCGACGGACTACTCGCCTA 60.529 60.000 0.00 0.00 0.00 3.93
70 71 1.814586 CTCGACGGACTACTCGCCT 60.815 63.158 0.00 0.00 0.00 5.52
71 72 2.708255 CTCGACGGACTACTCGCC 59.292 66.667 0.00 0.00 0.00 5.54
72 73 2.023041 GCTCGACGGACTACTCGC 59.977 66.667 0.00 0.00 0.00 5.03
73 74 2.708255 GGCTCGACGGACTACTCG 59.292 66.667 0.00 0.00 0.00 4.18
74 75 2.708255 CGGCTCGACGGACTACTC 59.292 66.667 0.00 0.00 0.00 2.59
75 76 3.507009 GCGGCTCGACGGACTACT 61.507 66.667 0.00 0.00 0.00 2.57
76 77 4.549516 GGCGGCTCGACGGACTAC 62.550 72.222 0.00 0.00 0.00 2.73
100 101 4.570663 GATGAGGACGACGGCGGG 62.571 72.222 18.49 5.08 43.17 6.13
101 102 3.138930 ATGATGAGGACGACGGCGG 62.139 63.158 18.49 0.00 43.17 6.13
102 103 1.658717 GATGATGAGGACGACGGCG 60.659 63.158 10.39 10.39 44.79 6.46
103 104 0.318275 GAGATGATGAGGACGACGGC 60.318 60.000 0.00 0.00 0.00 5.68
104 105 0.312416 GGAGATGATGAGGACGACGG 59.688 60.000 0.00 0.00 0.00 4.79
105 106 0.040870 CGGAGATGATGAGGACGACG 60.041 60.000 0.00 0.00 0.00 5.12
106 107 0.318275 GCGGAGATGATGAGGACGAC 60.318 60.000 0.00 0.00 0.00 4.34
107 108 0.466372 AGCGGAGATGATGAGGACGA 60.466 55.000 0.00 0.00 0.00 4.20
108 109 2.037053 AGCGGAGATGATGAGGACG 58.963 57.895 0.00 0.00 0.00 4.79
118 119 1.810532 GGACGAAGACAGCGGAGAT 59.189 57.895 0.00 0.00 0.00 2.75
119 120 2.687805 CGGACGAAGACAGCGGAGA 61.688 63.158 0.00 0.00 0.00 3.71
120 121 2.202492 CGGACGAAGACAGCGGAG 60.202 66.667 0.00 0.00 0.00 4.63
121 122 4.415332 GCGGACGAAGACAGCGGA 62.415 66.667 0.00 0.00 33.27 5.54
124 125 0.248296 CTCTAGCGGACGAAGACAGC 60.248 60.000 0.00 0.00 43.49 4.40
125 126 0.248296 GCTCTAGCGGACGAAGACAG 60.248 60.000 0.00 0.00 0.00 3.51
126 127 1.654954 GGCTCTAGCGGACGAAGACA 61.655 60.000 0.00 0.00 43.26 3.41
127 128 1.064458 GGCTCTAGCGGACGAAGAC 59.936 63.158 0.00 0.00 43.26 3.01
128 129 2.119655 GGGCTCTAGCGGACGAAGA 61.120 63.158 0.00 0.00 43.26 2.87
129 130 2.343163 CTGGGCTCTAGCGGACGAAG 62.343 65.000 0.00 0.00 43.26 3.79
130 131 2.361992 TGGGCTCTAGCGGACGAA 60.362 61.111 0.00 0.00 43.26 3.85
131 132 2.829003 CTGGGCTCTAGCGGACGA 60.829 66.667 0.00 0.00 43.26 4.20
132 133 1.739338 ATTCTGGGCTCTAGCGGACG 61.739 60.000 0.00 0.00 43.26 4.79
133 134 0.032815 GATTCTGGGCTCTAGCGGAC 59.967 60.000 0.00 0.00 43.26 4.79
134 135 0.105964 AGATTCTGGGCTCTAGCGGA 60.106 55.000 0.00 0.00 43.26 5.54
135 136 0.316841 GAGATTCTGGGCTCTAGCGG 59.683 60.000 0.00 0.00 43.26 5.52
136 137 0.316841 GGAGATTCTGGGCTCTAGCG 59.683 60.000 0.00 0.00 43.26 4.26
137 138 0.684535 GGGAGATTCTGGGCTCTAGC 59.315 60.000 0.00 0.00 41.14 3.42
138 139 1.347062 GGGGAGATTCTGGGCTCTAG 58.653 60.000 0.00 0.00 0.00 2.43
139 140 0.104934 GGGGGAGATTCTGGGCTCTA 60.105 60.000 0.00 0.00 0.00 2.43
140 141 1.385206 GGGGGAGATTCTGGGCTCT 60.385 63.158 0.00 0.00 0.00 4.09
141 142 3.245650 GGGGGAGATTCTGGGCTC 58.754 66.667 0.00 0.00 0.00 4.70
162 163 3.917760 GGTGATCGCCGGAGAGGG 61.918 72.222 14.81 0.00 41.48 4.30
163 164 3.144120 CTGGTGATCGCCGGAGAGG 62.144 68.421 27.27 6.12 44.97 3.69
164 165 2.415010 CTGGTGATCGCCGGAGAG 59.585 66.667 27.27 11.84 37.06 3.20
165 166 3.147595 CCTGGTGATCGCCGGAGA 61.148 66.667 31.78 11.31 37.06 3.71
166 167 4.227134 CCCTGGTGATCGCCGGAG 62.227 72.222 31.78 18.12 37.06 4.63
172 173 3.723235 CTGACGCCCCTGGTGATCG 62.723 68.421 0.00 0.00 36.58 3.69
173 174 2.187946 CTGACGCCCCTGGTGATC 59.812 66.667 0.00 0.00 36.58 2.92
174 175 4.101448 GCTGACGCCCCTGGTGAT 62.101 66.667 0.00 0.00 36.58 3.06
200 201 3.047877 CACCGGGGTCTTTGACGC 61.048 66.667 6.32 6.27 43.35 5.19
201 202 3.047877 GCACCGGGGTCTTTGACG 61.048 66.667 5.12 0.00 32.65 4.35
202 203 2.671963 GGCACCGGGGTCTTTGAC 60.672 66.667 5.12 0.00 0.00 3.18
203 204 2.478335 GATGGCACCGGGGTCTTTGA 62.478 60.000 11.04 0.00 0.00 2.69
204 205 2.035626 ATGGCACCGGGGTCTTTG 59.964 61.111 11.04 0.00 0.00 2.77
205 206 2.355115 GATGGCACCGGGGTCTTT 59.645 61.111 11.04 0.00 0.00 2.52
206 207 4.096003 CGATGGCACCGGGGTCTT 62.096 66.667 11.04 1.68 0.00 3.01
208 209 4.832608 GACGATGGCACCGGGGTC 62.833 72.222 6.07 0.00 0.00 4.46
224 225 3.224324 GACTAGGGGCGATGGCGA 61.224 66.667 0.00 0.00 41.24 5.54
225 226 4.647615 CGACTAGGGGCGATGGCG 62.648 72.222 0.00 0.00 41.24 5.69
226 227 4.971125 GCGACTAGGGGCGATGGC 62.971 72.222 6.17 0.00 38.90 4.40
227 228 4.301027 GGCGACTAGGGGCGATGG 62.301 72.222 6.17 0.00 0.00 3.51
228 229 4.301027 GGGCGACTAGGGGCGATG 62.301 72.222 6.17 0.00 0.00 3.84
231 232 4.908487 TAGGGGCGACTAGGGGCG 62.908 72.222 0.00 0.00 0.00 6.13
232 233 2.918276 CTAGGGGCGACTAGGGGC 60.918 72.222 6.90 0.00 37.41 5.80
233 234 1.531128 GACTAGGGGCGACTAGGGG 60.531 68.421 16.14 0.00 43.72 4.79
234 235 0.824182 CTGACTAGGGGCGACTAGGG 60.824 65.000 16.14 5.56 43.72 3.53
235 236 0.824182 CCTGACTAGGGGCGACTAGG 60.824 65.000 16.14 1.23 43.72 3.02
236 237 2.721945 CCTGACTAGGGGCGACTAG 58.278 63.158 11.81 11.81 44.71 2.57
245 246 0.982852 TGATGGGTGCCCTGACTAGG 60.983 60.000 8.91 0.00 44.18 3.02
246 247 0.179000 GTGATGGGTGCCCTGACTAG 59.821 60.000 8.91 0.00 36.94 2.57
247 248 0.546507 TGTGATGGGTGCCCTGACTA 60.547 55.000 8.91 0.00 36.94 2.59
248 249 1.210204 ATGTGATGGGTGCCCTGACT 61.210 55.000 8.91 0.00 36.94 3.41
249 250 1.033746 CATGTGATGGGTGCCCTGAC 61.034 60.000 8.91 3.32 36.94 3.51
250 251 1.303948 CATGTGATGGGTGCCCTGA 59.696 57.895 8.91 0.00 36.94 3.86
251 252 1.755395 CCATGTGATGGGTGCCCTG 60.755 63.158 8.91 0.00 46.86 4.45
252 253 2.685366 CCATGTGATGGGTGCCCT 59.315 61.111 8.91 0.00 46.86 5.19
260 261 5.413523 TCTGAGTTCATTTGTCCATGTGATG 59.586 40.000 0.00 0.00 0.00 3.07
261 262 5.563592 TCTGAGTTCATTTGTCCATGTGAT 58.436 37.500 0.00 0.00 0.00 3.06
262 263 4.971939 TCTGAGTTCATTTGTCCATGTGA 58.028 39.130 0.00 0.00 0.00 3.58
263 264 5.240183 ACTTCTGAGTTCATTTGTCCATGTG 59.760 40.000 0.00 0.00 29.87 3.21
264 265 5.380043 ACTTCTGAGTTCATTTGTCCATGT 58.620 37.500 0.00 0.00 29.87 3.21
265 266 5.471116 TGACTTCTGAGTTCATTTGTCCATG 59.529 40.000 0.00 0.00 35.88 3.66
266 267 5.624159 TGACTTCTGAGTTCATTTGTCCAT 58.376 37.500 0.00 0.00 35.88 3.41
267 268 5.034852 TGACTTCTGAGTTCATTTGTCCA 57.965 39.130 0.00 0.00 35.88 4.02
268 269 6.205464 TGAATGACTTCTGAGTTCATTTGTCC 59.795 38.462 13.77 5.59 35.60 4.02
269 270 7.074502 GTGAATGACTTCTGAGTTCATTTGTC 58.925 38.462 13.77 5.90 35.60 3.18
270 271 6.543465 TGTGAATGACTTCTGAGTTCATTTGT 59.457 34.615 13.77 0.00 35.60 2.83
271 272 6.854892 GTGTGAATGACTTCTGAGTTCATTTG 59.145 38.462 13.77 0.00 35.60 2.32
272 273 6.016777 GGTGTGAATGACTTCTGAGTTCATTT 60.017 38.462 13.77 2.97 35.60 2.32
273 274 5.471456 GGTGTGAATGACTTCTGAGTTCATT 59.529 40.000 12.89 12.89 36.86 2.57
274 275 4.999950 GGTGTGAATGACTTCTGAGTTCAT 59.000 41.667 0.00 0.00 35.88 2.57
275 276 4.141733 TGGTGTGAATGACTTCTGAGTTCA 60.142 41.667 0.00 0.00 35.88 3.18
276 277 4.212214 GTGGTGTGAATGACTTCTGAGTTC 59.788 45.833 0.00 0.00 35.88 3.01
277 278 4.130118 GTGGTGTGAATGACTTCTGAGTT 58.870 43.478 0.00 0.00 35.88 3.01
278 279 3.134623 TGTGGTGTGAATGACTTCTGAGT 59.865 43.478 0.00 0.00 39.32 3.41
279 280 3.732212 TGTGGTGTGAATGACTTCTGAG 58.268 45.455 0.00 0.00 32.29 3.35
280 281 3.836365 TGTGGTGTGAATGACTTCTGA 57.164 42.857 0.00 0.00 32.29 3.27
281 282 3.817084 ACATGTGGTGTGAATGACTTCTG 59.183 43.478 0.00 0.00 40.28 3.02
282 283 4.090761 ACATGTGGTGTGAATGACTTCT 57.909 40.909 0.00 0.00 40.28 2.85
283 284 4.754618 TGTACATGTGGTGTGAATGACTTC 59.245 41.667 9.11 0.00 42.24 3.01
284 285 4.515191 GTGTACATGTGGTGTGAATGACTT 59.485 41.667 9.11 0.00 42.24 3.01
285 286 4.065088 GTGTACATGTGGTGTGAATGACT 58.935 43.478 9.11 0.00 42.24 3.41
286 287 3.188460 GGTGTACATGTGGTGTGAATGAC 59.812 47.826 9.11 0.00 42.24 3.06
287 288 3.407698 GGTGTACATGTGGTGTGAATGA 58.592 45.455 9.11 0.00 42.24 2.57
288 289 2.487762 GGGTGTACATGTGGTGTGAATG 59.512 50.000 9.11 0.00 42.24 2.67
289 290 2.554344 GGGGTGTACATGTGGTGTGAAT 60.554 50.000 9.11 0.00 42.24 2.57
290 291 1.202830 GGGGTGTACATGTGGTGTGAA 60.203 52.381 9.11 0.00 42.24 3.18
291 292 0.398696 GGGGTGTACATGTGGTGTGA 59.601 55.000 9.11 0.00 42.24 3.58
292 293 0.400213 AGGGGTGTACATGTGGTGTG 59.600 55.000 9.11 0.00 42.24 3.82
293 294 1.626825 GTAGGGGTGTACATGTGGTGT 59.373 52.381 9.11 0.00 44.95 4.16
294 295 1.906574 AGTAGGGGTGTACATGTGGTG 59.093 52.381 9.11 0.00 0.00 4.17
295 296 2.337359 AGTAGGGGTGTACATGTGGT 57.663 50.000 9.11 0.00 0.00 4.16
296 297 3.371965 AGTAGTAGGGGTGTACATGTGG 58.628 50.000 9.11 0.00 0.00 4.17
297 298 3.383825 GGAGTAGTAGGGGTGTACATGTG 59.616 52.174 9.11 0.00 0.00 3.21
298 299 3.012047 TGGAGTAGTAGGGGTGTACATGT 59.988 47.826 2.69 2.69 0.00 3.21
299 300 3.638860 TGGAGTAGTAGGGGTGTACATG 58.361 50.000 0.00 0.00 0.00 3.21
300 301 4.554553 ATGGAGTAGTAGGGGTGTACAT 57.445 45.455 0.00 0.00 0.00 2.29
301 302 4.341863 AATGGAGTAGTAGGGGTGTACA 57.658 45.455 0.00 0.00 0.00 2.90
302 303 4.831710 CCTAATGGAGTAGTAGGGGTGTAC 59.168 50.000 0.00 0.00 42.17 2.90
303 304 5.070823 CCTAATGGAGTAGTAGGGGTGTA 57.929 47.826 0.00 0.00 42.17 2.90
304 305 3.924922 CCTAATGGAGTAGTAGGGGTGT 58.075 50.000 0.00 0.00 42.17 4.16
309 310 3.325135 CCTTGCCCTAATGGAGTAGTAGG 59.675 52.174 0.00 0.00 44.78 3.18
310 311 3.967987 ACCTTGCCCTAATGGAGTAGTAG 59.032 47.826 0.00 0.00 35.39 2.57
311 312 3.709653 CACCTTGCCCTAATGGAGTAGTA 59.290 47.826 0.00 0.00 35.39 1.82
312 313 2.505819 CACCTTGCCCTAATGGAGTAGT 59.494 50.000 0.00 0.00 35.39 2.73
313 314 2.158755 CCACCTTGCCCTAATGGAGTAG 60.159 54.545 0.00 0.00 35.39 2.57
314 315 1.843851 CCACCTTGCCCTAATGGAGTA 59.156 52.381 0.00 0.00 35.39 2.59
315 316 0.625849 CCACCTTGCCCTAATGGAGT 59.374 55.000 0.00 0.00 35.39 3.85
316 317 0.106519 CCCACCTTGCCCTAATGGAG 60.107 60.000 0.00 0.00 35.39 3.86
317 318 1.580066 CCCCACCTTGCCCTAATGGA 61.580 60.000 0.00 0.00 35.39 3.41
318 319 1.076044 CCCCACCTTGCCCTAATGG 60.076 63.158 0.00 0.00 37.09 3.16
319 320 1.758122 GCCCCACCTTGCCCTAATG 60.758 63.158 0.00 0.00 0.00 1.90
320 321 1.809939 TTGCCCCACCTTGCCCTAAT 61.810 55.000 0.00 0.00 0.00 1.73
321 322 2.024983 TTTGCCCCACCTTGCCCTAA 62.025 55.000 0.00 0.00 0.00 2.69
322 323 2.024983 TTTTGCCCCACCTTGCCCTA 62.025 55.000 0.00 0.00 0.00 3.53
323 324 2.905676 TTTTTGCCCCACCTTGCCCT 62.906 55.000 0.00 0.00 0.00 5.19
324 325 2.447714 TTTTTGCCCCACCTTGCCC 61.448 57.895 0.00 0.00 0.00 5.36
325 326 1.227823 GTTTTTGCCCCACCTTGCC 60.228 57.895 0.00 0.00 0.00 4.52
326 327 0.107459 TTGTTTTTGCCCCACCTTGC 60.107 50.000 0.00 0.00 0.00 4.01
327 328 2.636647 ATTGTTTTTGCCCCACCTTG 57.363 45.000 0.00 0.00 0.00 3.61
328 329 4.991789 ATTATTGTTTTTGCCCCACCTT 57.008 36.364 0.00 0.00 0.00 3.50
329 330 6.634889 AATATTATTGTTTTTGCCCCACCT 57.365 33.333 0.00 0.00 0.00 4.00
418 425 6.203647 ACCATTTGTTACTTTCAAGCGTTAC 58.796 36.000 0.00 0.00 0.00 2.50
461 468 2.315386 GGTCGACTTTGTCCCGTGC 61.315 63.158 16.46 0.00 0.00 5.34
500 507 0.668535 AAGTCGCAAGGGCTTTGAAC 59.331 50.000 14.11 9.98 39.21 3.18
501 508 1.398692 AAAGTCGCAAGGGCTTTGAA 58.601 45.000 14.11 0.00 39.86 2.69
581 3346 1.032114 ATGCTGTAAGAAAGGCCGCC 61.032 55.000 0.00 0.00 34.07 6.13
728 3939 4.898265 TGGGATTAGACTGGAGAAGATCTG 59.102 45.833 0.00 0.00 0.00 2.90
829 4719 2.680339 GTGCCTGTCTGCCTTATCTTTC 59.320 50.000 0.00 0.00 0.00 2.62
842 4742 0.868406 CCTCTTTTGTCGTGCCTGTC 59.132 55.000 0.00 0.00 0.00 3.51
843 4743 1.166531 GCCTCTTTTGTCGTGCCTGT 61.167 55.000 0.00 0.00 0.00 4.00
844 4744 1.165907 TGCCTCTTTTGTCGTGCCTG 61.166 55.000 0.00 0.00 0.00 4.85
845 4745 1.148273 TGCCTCTTTTGTCGTGCCT 59.852 52.632 0.00 0.00 0.00 4.75
846 4746 1.282875 GTGCCTCTTTTGTCGTGCC 59.717 57.895 0.00 0.00 0.00 5.01
847 4747 1.082756 CGTGCCTCTTTTGTCGTGC 60.083 57.895 0.00 0.00 0.00 5.34
848 4748 0.508641 CTCGTGCCTCTTTTGTCGTG 59.491 55.000 0.00 0.00 0.00 4.35
849 4749 1.222115 GCTCGTGCCTCTTTTGTCGT 61.222 55.000 0.00 0.00 0.00 4.34
855 4755 0.035317 TCATGTGCTCGTGCCTCTTT 59.965 50.000 7.05 0.00 38.71 2.52
886 4786 2.298629 CGTCTCCTCGCATGCATCG 61.299 63.158 19.57 4.09 0.00 3.84
956 4868 0.889306 GTGACGGTGGCTAGAGTTCT 59.111 55.000 0.00 0.00 0.00 3.01
972 4884 0.462581 GCCAATCCGCAGATGAGTGA 60.463 55.000 0.00 0.00 31.29 3.41
988 4900 1.223211 CATACATGTCCGGTGGCCA 59.777 57.895 0.00 0.00 0.00 5.36
1059 4972 2.728922 GCCGTGTAGAGAATAACCTCG 58.271 52.381 0.00 0.00 38.19 4.63
1066 4979 1.432251 CCGACGCCGTGTAGAGAAT 59.568 57.895 0.00 0.00 0.00 2.40
1365 5305 1.298859 CCCTCTTACACGCTTGGCAC 61.299 60.000 0.00 0.00 0.00 5.01
1374 5314 1.516423 GGAGCCGACCCTCTTACAC 59.484 63.158 0.00 0.00 32.43 2.90
1502 5878 5.032846 ACAGGGATATGAAGGAGAGAAACA 58.967 41.667 0.00 0.00 0.00 2.83
1524 5907 9.642327 TGGGTTTTTCTTTTCTTTTTGTAGTAC 57.358 29.630 0.00 0.00 0.00 2.73
1565 5949 3.966979 TGGGTGCATCATTGAATGTAGT 58.033 40.909 4.93 0.00 0.00 2.73
1593 6010 6.301169 AGCAGGGTATAGGCTAACATAATC 57.699 41.667 0.00 0.00 35.82 1.75
1608 6029 6.539173 TGAAGAAAATAACAGAAGCAGGGTA 58.461 36.000 0.00 0.00 0.00 3.69
1661 6082 3.338249 CTCAACCAAGTCATGTACAGGG 58.662 50.000 7.81 0.00 31.65 4.45
1723 6145 0.477204 CCATCCCATGACCAGAGCAT 59.523 55.000 0.00 0.00 0.00 3.79
1725 6147 1.527844 GCCATCCCATGACCAGAGC 60.528 63.158 0.00 0.00 0.00 4.09
1726 6148 0.477204 ATGCCATCCCATGACCAGAG 59.523 55.000 0.00 0.00 0.00 3.35
1769 6429 3.423154 GCTAGGTGTGCCGTGTGC 61.423 66.667 0.00 0.00 40.50 4.57
1770 6430 1.738099 GAGCTAGGTGTGCCGTGTG 60.738 63.158 0.00 0.00 40.50 3.82
1771 6431 2.207229 TGAGCTAGGTGTGCCGTGT 61.207 57.895 0.00 0.00 40.50 4.49
1772 6432 1.738099 GTGAGCTAGGTGTGCCGTG 60.738 63.158 0.00 0.00 40.50 4.94
1773 6433 2.657237 GTGAGCTAGGTGTGCCGT 59.343 61.111 0.00 0.00 40.50 5.68
1774 6434 2.507102 CGTGAGCTAGGTGTGCCG 60.507 66.667 0.00 0.00 40.50 5.69
1775 6435 1.446272 GACGTGAGCTAGGTGTGCC 60.446 63.158 0.00 0.00 0.00 5.01
1794 6454 2.182842 GTGCCATCCCACGATGCTC 61.183 63.158 0.00 0.00 44.00 4.26
1813 6473 0.824759 CTAAGCCGAGCCTACCTGTT 59.175 55.000 0.00 0.00 0.00 3.16
1874 6537 4.635223 ACTAGTAGGACACGCGATGTATA 58.365 43.478 15.93 7.52 43.56 1.47
1908 6571 7.577426 GCAACCCAGATTTATTCAACTGATTCA 60.577 37.037 0.00 0.00 32.90 2.57
1927 6590 1.108727 CCAAGACAGCAAGCAACCCA 61.109 55.000 0.00 0.00 0.00 4.51
1932 6595 0.824595 ATGCACCAAGACAGCAAGCA 60.825 50.000 0.00 0.00 42.15 3.91
1953 6616 7.894376 ATTATTGTTTGCAAGAAATGGACAG 57.106 32.000 15.31 0.00 38.97 3.51
1985 6648 4.489306 AGAGCCCCAGTACATTTTCTAC 57.511 45.455 0.00 0.00 0.00 2.59
1990 6733 2.092914 GCACTAGAGCCCCAGTACATTT 60.093 50.000 0.00 0.00 0.00 2.32
2012 6755 1.661341 CTGCCAGAGATTTCTTCCCG 58.339 55.000 0.00 0.00 0.00 5.14
2013 6756 1.387539 GCTGCCAGAGATTTCTTCCC 58.612 55.000 0.00 0.00 0.00 3.97
2025 6768 2.703798 CGGGTTTGATGGCTGCCAG 61.704 63.158 27.20 6.71 36.75 4.85
2040 6783 1.613925 AGATGATGATACCACGACGGG 59.386 52.381 0.00 0.00 40.22 5.28
2042 6785 3.559504 CAGAGATGATGATACCACGACG 58.440 50.000 0.00 0.00 0.00 5.12
2048 6791 5.468592 CACTGTAGCAGAGATGATGATACC 58.531 45.833 2.91 0.00 38.47 2.73
2052 6795 3.131755 CACCACTGTAGCAGAGATGATGA 59.868 47.826 2.91 0.00 35.18 2.92
2078 6821 3.832237 GACGATGCGGATGGCCCAT 62.832 63.158 0.00 0.00 42.61 4.00
2093 6836 2.106332 GGGACGGTGGCTATGACG 59.894 66.667 0.00 0.00 0.00 4.35
2251 6996 0.447801 CGCAACTTCGCTAAGGCATT 59.552 50.000 2.75 0.00 37.01 3.56
2261 7006 1.566018 GAGTCAACCCCGCAACTTCG 61.566 60.000 0.00 0.00 0.00 3.79
2270 7015 4.031611 AGGTACATTCTAGAGTCAACCCC 58.968 47.826 10.39 0.30 0.00 4.95
2443 7190 1.066152 TGTTGAGGAGAGATCGATGCG 59.934 52.381 0.54 0.00 0.00 4.73
2445 7192 3.130164 ACTGTGTTGAGGAGAGATCGATG 59.870 47.826 0.54 0.00 0.00 3.84
2446 7193 3.360867 ACTGTGTTGAGGAGAGATCGAT 58.639 45.455 0.00 0.00 0.00 3.59
2466 7213 6.968131 TTCATACACATTAGCACTGAGAAC 57.032 37.500 0.00 0.00 0.00 3.01
2472 7219 8.962884 TGATGTAATTCATACACATTAGCACT 57.037 30.769 0.00 0.00 46.90 4.40
2524 7280 1.190643 TCACACACACAGTCACCAGA 58.809 50.000 0.00 0.00 0.00 3.86
2557 7313 0.327924 CCACTATGGTCAACTGCCCA 59.672 55.000 0.00 0.00 31.35 5.36
2582 7338 2.031769 CGTTGGTGTACTCGACTACACA 60.032 50.000 26.33 15.40 45.76 3.72
2587 7343 1.288127 GCCGTTGGTGTACTCGACT 59.712 57.895 0.00 0.00 0.00 4.18
2595 7351 2.342650 GCCATGATGCCGTTGGTGT 61.343 57.895 0.00 0.00 32.90 4.16
2621 7377 0.106894 GTGGCTAGTGGTATGCCTCC 59.893 60.000 0.16 0.00 46.23 4.30
2668 7424 6.767524 TTTATGGGTACTGGTGCAAAATAG 57.232 37.500 0.00 0.00 0.00 1.73
2761 7517 1.358877 CGCATCGACAATGGTGAGAA 58.641 50.000 0.00 0.00 35.77 2.87
2784 7540 1.228245 CCATGGAGGTTATGCCCGG 60.228 63.158 5.56 0.00 38.26 5.73
2785 7541 4.481195 CCATGGAGGTTATGCCCG 57.519 61.111 5.56 0.00 38.26 6.13
2871 7627 0.035630 ACTGCCCTCTTCATCACTGC 60.036 55.000 0.00 0.00 0.00 4.40
2874 7630 1.028868 GCCACTGCCCTCTTCATCAC 61.029 60.000 0.00 0.00 0.00 3.06
2875 7631 1.300963 GCCACTGCCCTCTTCATCA 59.699 57.895 0.00 0.00 0.00 3.07
2899 7655 0.321671 TGCACTAGTCAGAAGCCCAC 59.678 55.000 0.00 0.00 0.00 4.61
2900 7656 0.321671 GTGCACTAGTCAGAAGCCCA 59.678 55.000 10.32 0.00 0.00 5.36
2901 7657 0.391793 GGTGCACTAGTCAGAAGCCC 60.392 60.000 17.98 0.00 0.00 5.19
2902 7658 0.737715 CGGTGCACTAGTCAGAAGCC 60.738 60.000 17.98 0.00 0.00 4.35
2903 7659 0.038159 ACGGTGCACTAGTCAGAAGC 60.038 55.000 17.98 0.00 0.00 3.86
2904 7660 2.732597 GCTACGGTGCACTAGTCAGAAG 60.733 54.545 17.98 11.83 0.00 2.85
2905 7661 1.201647 GCTACGGTGCACTAGTCAGAA 59.798 52.381 17.98 1.86 0.00 3.02
2906 7662 0.809385 GCTACGGTGCACTAGTCAGA 59.191 55.000 17.98 2.20 0.00 3.27
2907 7663 0.526211 TGCTACGGTGCACTAGTCAG 59.474 55.000 17.98 14.48 38.12 3.51
2908 7664 0.963225 TTGCTACGGTGCACTAGTCA 59.037 50.000 17.98 10.61 43.20 3.41
2909 7665 1.336517 TGTTGCTACGGTGCACTAGTC 60.337 52.381 17.98 8.35 43.20 2.59
2910 7666 0.677288 TGTTGCTACGGTGCACTAGT 59.323 50.000 17.98 18.64 43.20 2.57
2911 7667 1.790755 TTGTTGCTACGGTGCACTAG 58.209 50.000 17.98 12.52 43.20 2.57
2912 7668 2.242047 TTTGTTGCTACGGTGCACTA 57.758 45.000 17.98 0.74 43.20 2.74
2913 7669 1.266718 CATTTGTTGCTACGGTGCACT 59.733 47.619 17.98 0.00 43.20 4.40
2914 7670 1.665735 CCATTTGTTGCTACGGTGCAC 60.666 52.381 8.80 8.80 43.20 4.57
2915 7671 0.595588 CCATTTGTTGCTACGGTGCA 59.404 50.000 0.45 0.45 41.65 4.57
2916 7672 0.596082 ACCATTTGTTGCTACGGTGC 59.404 50.000 0.00 0.00 0.00 5.01
2917 7673 2.159572 GCTACCATTTGTTGCTACGGTG 60.160 50.000 6.00 0.00 41.68 4.94
2918 7674 2.081462 GCTACCATTTGTTGCTACGGT 58.919 47.619 1.81 1.81 41.68 4.83
2919 7675 2.825086 GCTACCATTTGTTGCTACGG 57.175 50.000 0.00 0.00 41.68 4.02
2934 7690 2.766828 ACAATGGAGTAGGGTGAGCTAC 59.233 50.000 0.00 0.00 0.00 3.58
2935 7691 3.031736 GACAATGGAGTAGGGTGAGCTA 58.968 50.000 0.00 0.00 0.00 3.32
2936 7692 1.834263 GACAATGGAGTAGGGTGAGCT 59.166 52.381 0.00 0.00 0.00 4.09
2937 7693 1.555075 TGACAATGGAGTAGGGTGAGC 59.445 52.381 0.00 0.00 0.00 4.26
2938 7694 2.834549 AGTGACAATGGAGTAGGGTGAG 59.165 50.000 0.00 0.00 0.00 3.51
2939 7695 2.902608 AGTGACAATGGAGTAGGGTGA 58.097 47.619 0.00 0.00 0.00 4.02
2940 7696 3.769844 ACTAGTGACAATGGAGTAGGGTG 59.230 47.826 0.00 0.00 0.00 4.61
2941 7697 4.062490 ACTAGTGACAATGGAGTAGGGT 57.938 45.455 0.00 0.00 0.00 4.34
2942 7698 5.446860 TCTACTAGTGACAATGGAGTAGGG 58.553 45.833 5.39 0.00 39.92 3.53
2943 7699 7.406031 TTTCTACTAGTGACAATGGAGTAGG 57.594 40.000 5.39 0.00 39.92 3.18
2944 7700 9.360093 CTTTTTCTACTAGTGACAATGGAGTAG 57.640 37.037 5.39 6.54 40.54 2.57
2945 7701 8.311836 CCTTTTTCTACTAGTGACAATGGAGTA 58.688 37.037 5.39 0.00 0.00 2.59
2946 7702 7.162082 CCTTTTTCTACTAGTGACAATGGAGT 58.838 38.462 5.39 0.00 0.00 3.85
2947 7703 6.595716 CCCTTTTTCTACTAGTGACAATGGAG 59.404 42.308 5.39 0.00 0.00 3.86
2948 7704 6.043938 ACCCTTTTTCTACTAGTGACAATGGA 59.956 38.462 5.39 0.00 0.00 3.41
2949 7705 6.238648 ACCCTTTTTCTACTAGTGACAATGG 58.761 40.000 5.39 10.99 0.00 3.16
2950 7706 6.934645 TGACCCTTTTTCTACTAGTGACAATG 59.065 38.462 5.39 3.59 0.00 2.82
2951 7707 7.074653 TGACCCTTTTTCTACTAGTGACAAT 57.925 36.000 5.39 0.00 0.00 2.71
2952 7708 6.488769 TGACCCTTTTTCTACTAGTGACAA 57.511 37.500 5.39 0.00 0.00 3.18
3061 7817 3.489785 GCCACGAATCGGTACTAATGAAG 59.510 47.826 7.80 0.00 0.00 3.02
3132 7888 3.198068 CCATTCTGACAACATCCTACCG 58.802 50.000 0.00 0.00 0.00 4.02
3135 7891 2.092429 GCCCCATTCTGACAACATCCTA 60.092 50.000 0.00 0.00 0.00 2.94
3313 8084 8.147704 GGGGACTTCAAATCTTGACAAATTTTA 58.852 33.333 0.00 0.00 39.87 1.52
3343 8114 5.867903 AACCTTTGTGACCATTTCAATGA 57.132 34.783 0.81 0.00 38.70 2.57
3348 8119 4.846779 TGCTAACCTTTGTGACCATTTC 57.153 40.909 0.00 0.00 0.00 2.17
3354 8131 4.993905 ACAAAGTTGCTAACCTTTGTGAC 58.006 39.130 14.84 0.00 44.90 3.67
3620 8663 5.511545 GGTGGCTACGATGGAGATTTAGAAT 60.512 44.000 0.00 0.00 0.00 2.40
3769 9010 6.074195 GGCGCTATATGTATAACAAACAACGA 60.074 38.462 7.64 0.00 0.00 3.85
3791 9032 1.946768 ACGGATATCAAAACCATGGCG 59.053 47.619 13.04 5.55 0.00 5.69
3814 9055 2.050350 CAAGGACTAGGGCCGACGA 61.050 63.158 0.00 0.00 0.00 4.20
4467 9775 6.518493 TGGTTCTTGACGTAGAGTAATTGTT 58.482 36.000 0.00 0.00 0.00 2.83
4517 9825 6.041865 TCCAAACATTATAATGGGGCATGAAG 59.958 38.462 25.45 7.79 40.70 3.02
4603 9911 0.846693 GAACCCATGGCCAGGATAGT 59.153 55.000 21.32 10.49 0.00 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.