Multiple sequence alignment - TraesCS7A01G003900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G003900 chr7A 100.000 6855 0 0 1 6855 1920522 1927376 0.000000e+00 12659.0
1 TraesCS7A01G003900 chr7A 81.881 723 99 20 6141 6855 52679046 52679744 1.280000e-161 580.0
2 TraesCS7A01G003900 chr7A 87.171 304 25 11 940 1240 1909076 1909368 3.960000e-87 333.0
3 TraesCS7A01G003900 chr7A 82.000 150 15 7 707 846 1908369 1908516 4.340000e-22 117.0
4 TraesCS7A01G003900 chr4A 89.184 4022 248 100 1872 5791 742337212 742333276 0.000000e+00 4844.0
5 TraesCS7A01G003900 chr4A 86.588 425 35 9 5937 6345 742333063 742332645 3.770000e-122 449.0
6 TraesCS7A01G003900 chr4A 89.206 315 15 10 940 1245 742338250 742337946 6.490000e-100 375.0
7 TraesCS7A01G003900 chr4A 83.333 414 55 7 1958 2370 658573330 658573730 3.020000e-98 370.0
8 TraesCS7A01G003900 chr4A 78.188 596 74 27 240 799 742355466 742354891 5.130000e-86 329.0
9 TraesCS7A01G003900 chr4A 78.234 487 64 22 1391 1860 742337720 742337259 2.440000e-69 274.0
10 TraesCS7A01G003900 chr4A 88.732 142 9 4 5792 5930 742333239 742333102 4.250000e-37 167.0
11 TraesCS7A01G003900 chr4A 88.889 54 6 0 5729 5782 601004970 601004917 4.440000e-07 67.6
12 TraesCS7A01G003900 chr4A 93.023 43 3 0 5593 5635 601005038 601004996 5.740000e-06 63.9
13 TraesCS7A01G003900 chr7D 87.703 3326 231 79 941 4175 2325362 2328600 0.000000e+00 3712.0
14 TraesCS7A01G003900 chr7D 90.136 1176 88 17 4345 5502 2328743 2329908 0.000000e+00 1504.0
15 TraesCS7A01G003900 chr7D 81.180 898 114 36 1 850 2315082 2315972 0.000000e+00 671.0
16 TraesCS7A01G003900 chr7D 82.788 703 93 17 6157 6854 596308573 596307894 2.740000e-168 603.0
17 TraesCS7A01G003900 chr7D 97.571 247 6 0 5544 5790 2329991 2330237 2.290000e-114 424.0
18 TraesCS7A01G003900 chr7D 83.951 405 32 19 866 1245 2316026 2316422 2.350000e-94 357.0
19 TraesCS7A01G003900 chr7D 82.369 363 38 12 5794 6131 2330274 2330635 6.720000e-75 292.0
20 TraesCS7A01G003900 chr7D 88.462 234 24 3 1010 1240 2259185 2259418 5.240000e-71 279.0
21 TraesCS7A01G003900 chr7D 78.218 202 30 6 1350 1547 2316608 2316799 4.340000e-22 117.0
22 TraesCS7A01G003900 chr6A 82.923 732 100 15 6131 6855 502359995 502359282 2.700000e-178 636.0
23 TraesCS7A01G003900 chr3B 83.582 670 93 13 6144 6806 783291840 783292499 4.540000e-171 612.0
24 TraesCS7A01G003900 chr5B 82.370 709 99 22 6155 6855 445652258 445652948 1.650000e-165 593.0
25 TraesCS7A01G003900 chr6B 84.035 570 71 15 6146 6708 105362952 105363508 1.310000e-146 531.0
26 TraesCS7A01G003900 chr2B 80.699 715 107 20 6151 6855 411880573 411881266 1.690000e-145 527.0
27 TraesCS7A01G003900 chr3D 84.803 533 64 13 6158 6686 577565102 577565621 2.830000e-143 520.0
28 TraesCS7A01G003900 chr3D 83.519 540 65 20 6151 6685 596271492 596270972 3.720000e-132 483.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G003900 chr7A 1920522 1927376 6854 False 12659.000000 12659 100.000000 1 6855 1 chr7A.!!$F1 6854
1 TraesCS7A01G003900 chr7A 52679046 52679744 698 False 580.000000 580 81.881000 6141 6855 1 chr7A.!!$F2 714
2 TraesCS7A01G003900 chr7A 1908369 1909368 999 False 225.000000 333 84.585500 707 1240 2 chr7A.!!$F3 533
3 TraesCS7A01G003900 chr4A 742332645 742338250 5605 True 1221.800000 4844 86.388800 940 6345 5 chr4A.!!$R3 5405
4 TraesCS7A01G003900 chr4A 742354891 742355466 575 True 329.000000 329 78.188000 240 799 1 chr4A.!!$R1 559
5 TraesCS7A01G003900 chr7D 2325362 2330635 5273 False 1483.000000 3712 89.444750 941 6131 4 chr7D.!!$F3 5190
6 TraesCS7A01G003900 chr7D 596307894 596308573 679 True 603.000000 603 82.788000 6157 6854 1 chr7D.!!$R1 697
7 TraesCS7A01G003900 chr7D 2315082 2316799 1717 False 381.666667 671 81.116333 1 1547 3 chr7D.!!$F2 1546
8 TraesCS7A01G003900 chr6A 502359282 502359995 713 True 636.000000 636 82.923000 6131 6855 1 chr6A.!!$R1 724
9 TraesCS7A01G003900 chr3B 783291840 783292499 659 False 612.000000 612 83.582000 6144 6806 1 chr3B.!!$F1 662
10 TraesCS7A01G003900 chr5B 445652258 445652948 690 False 593.000000 593 82.370000 6155 6855 1 chr5B.!!$F1 700
11 TraesCS7A01G003900 chr6B 105362952 105363508 556 False 531.000000 531 84.035000 6146 6708 1 chr6B.!!$F1 562
12 TraesCS7A01G003900 chr2B 411880573 411881266 693 False 527.000000 527 80.699000 6151 6855 1 chr2B.!!$F1 704
13 TraesCS7A01G003900 chr3D 577565102 577565621 519 False 520.000000 520 84.803000 6158 6686 1 chr3D.!!$F1 528
14 TraesCS7A01G003900 chr3D 596270972 596271492 520 True 483.000000 483 83.519000 6151 6685 1 chr3D.!!$R1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
589 614 0.105555 ATGTGGGGCCATAATGGGTG 60.106 55.000 4.39 0.00 38.19 4.61 F
1864 2601 0.179468 TATTCGGTTACCAGGCCTGC 59.821 55.000 28.39 13.49 0.00 4.85 F
2511 3262 0.028505 CTTATGTGCTGCGGATGTGC 59.971 55.000 0.00 0.00 0.00 4.57 F
2522 3273 0.108186 CGGATGTGCTCAAGCCTACA 60.108 55.000 0.00 0.00 41.18 2.74 F
2642 3398 0.169672 CTTTGTGCAGGCTTCATCCG 59.830 55.000 0.00 0.00 0.00 4.18 F
3023 3792 0.406361 TTATGTTTCCCCGGCAACCT 59.594 50.000 0.00 0.00 0.00 3.50 F
3341 4112 1.075301 AAAGTTTGGCAGTGGGGCT 60.075 52.632 0.00 0.00 43.83 5.19 F
5031 5865 1.748493 GAAGAAGGTTGGTGTTGCACA 59.252 47.619 1.61 0.00 35.86 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2492 3243 0.028505 GCACATCCGCAGCACATAAG 59.971 55.0 0.00 0.00 0.00 1.73 R
3114 3883 0.302890 GAGCATACACGACTGCATGC 59.697 55.0 11.82 11.82 43.24 4.06 R
3970 4752 1.143305 CTTCCAGCTTCTGTGTGACG 58.857 55.0 0.00 0.00 0.00 4.35 R
4401 5231 1.351430 TTCGGCACTCTTCAATCGCG 61.351 55.0 0.00 0.00 0.00 5.87 R
4533 5363 1.295792 TCAGGTGCAAAACGACACTC 58.704 50.0 0.00 0.00 36.99 3.51 R
4843 5677 0.095935 CAAGCTCAATCGCTTCACCG 59.904 55.0 0.00 0.00 46.68 4.94 R
5093 5930 0.035881 CCATGTCACTGACTGCACCT 59.964 55.0 10.54 0.00 33.15 4.00 R
6175 7166 0.178975 TGTTTTTCCTCCCGGTGCAT 60.179 50.0 0.00 0.00 0.00 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.186047 CGTCCATGCCCGTTCGAC 61.186 66.667 0.00 0.00 0.00 4.20
37 38 1.301479 GCCCGTTCGACCTGAGTTT 60.301 57.895 0.00 0.00 0.00 2.66
42 43 3.379372 CCCGTTCGACCTGAGTTTAGATA 59.621 47.826 0.00 0.00 0.00 1.98
56 58 5.360591 AGTTTAGATAGTGAATTGAGCCCG 58.639 41.667 0.00 0.00 0.00 6.13
60 62 3.389329 AGATAGTGAATTGAGCCCGATGT 59.611 43.478 0.00 0.00 0.00 3.06
67 69 2.620251 TTGAGCCCGATGTCCTAATG 57.380 50.000 0.00 0.00 0.00 1.90
68 70 0.758734 TGAGCCCGATGTCCTAATGG 59.241 55.000 0.00 0.00 0.00 3.16
70 72 0.694444 AGCCCGATGTCCTAATGGGT 60.694 55.000 0.00 0.00 42.10 4.51
72 74 1.967319 CCCGATGTCCTAATGGGTTG 58.033 55.000 0.00 0.00 35.05 3.77
96 101 5.302823 GCTACTCCCATAGCATTTTTGGAAT 59.697 40.000 0.00 0.00 45.83 3.01
98 103 5.271598 ACTCCCATAGCATTTTTGGAATCA 58.728 37.500 0.00 0.00 31.94 2.57
99 104 5.721000 ACTCCCATAGCATTTTTGGAATCAA 59.279 36.000 0.00 0.00 31.94 2.57
142 147 1.070821 GTACCGTTGACCCGTTAAGC 58.929 55.000 0.00 0.00 0.00 3.09
144 149 0.601841 ACCGTTGACCCGTTAAGCAG 60.602 55.000 0.00 0.00 0.00 4.24
163 170 2.927864 TTTTTGGCGAGACCCCCA 59.072 55.556 0.00 0.00 37.83 4.96
181 188 3.374098 CCCCACACCCATCAATCCTATTT 60.374 47.826 0.00 0.00 0.00 1.40
187 194 5.187576 ACACCCATCAATCCTATTTGGTTTG 59.812 40.000 2.61 2.61 43.48 2.93
188 195 5.187576 CACCCATCAATCCTATTTGGTTTGT 59.812 40.000 7.51 0.00 42.94 2.83
189 196 5.187576 ACCCATCAATCCTATTTGGTTTGTG 59.812 40.000 7.51 6.02 42.94 3.33
196 203 4.746466 TCCTATTTGGTTTGTGTGGGATT 58.254 39.130 0.00 0.00 37.07 3.01
222 229 1.141657 CATCCGAACTGGTCCATGGAT 59.858 52.381 19.62 0.00 39.52 3.41
228 235 3.565482 CGAACTGGTCCATGGATATTTGG 59.435 47.826 19.62 8.41 0.00 3.28
237 244 3.141398 CATGGATATTTGGTGACTCCCG 58.859 50.000 0.00 0.00 34.77 5.14
244 251 0.768622 TTGGTGACTCCCGTTGGATT 59.231 50.000 0.00 0.00 40.80 3.01
255 262 2.094752 CCCGTTGGATTGATGACCAAAC 60.095 50.000 0.00 0.00 45.75 2.93
276 284 2.673368 CGGTCTTGCAGACTATTTGGTC 59.327 50.000 13.59 0.00 44.46 4.02
277 285 3.010420 GGTCTTGCAGACTATTTGGTCC 58.990 50.000 13.59 0.00 44.46 4.46
281 289 1.837439 TGCAGACTATTTGGTCCGGAT 59.163 47.619 7.81 0.00 36.95 4.18
282 290 2.238646 TGCAGACTATTTGGTCCGGATT 59.761 45.455 7.81 0.00 36.95 3.01
287 295 6.458342 GCAGACTATTTGGTCCGGATTTTTAG 60.458 42.308 7.81 8.51 36.95 1.85
291 299 0.626916 TGGTCCGGATTTTTAGGGGG 59.373 55.000 7.81 0.00 0.00 5.40
322 330 1.072505 TGCCTCGTTGGAGTTTCCC 59.927 57.895 1.63 0.00 38.70 3.97
328 336 1.348696 TCGTTGGAGTTTCCCTAACCC 59.651 52.381 0.00 0.00 37.46 4.11
329 337 1.817357 GTTGGAGTTTCCCTAACCCG 58.183 55.000 0.00 0.00 37.46 5.28
359 367 4.450082 TCTATGTATGTATCGGCGCATT 57.550 40.909 10.83 0.00 0.00 3.56
400 408 0.247736 GTGTCTCTCCCGCACAAGAT 59.752 55.000 0.00 0.00 33.70 2.40
455 464 2.048033 AACACGTTCGCGCCCATA 60.048 55.556 0.00 0.00 46.04 2.74
456 465 2.287637 GAACACGTTCGCGCCCATAC 62.288 60.000 0.00 0.00 46.04 2.39
457 466 3.560278 CACGTTCGCGCCCATACC 61.560 66.667 0.00 0.00 46.04 2.73
475 484 2.202623 GACGAGGCAAGCGACGAT 60.203 61.111 14.10 0.00 0.00 3.73
483 492 1.571919 GCAAGCGACGATAAGGATGT 58.428 50.000 0.00 0.00 0.00 3.06
498 507 4.307032 AGGATGTTGGATAAGTTGTGCT 57.693 40.909 0.00 0.00 0.00 4.40
546 555 1.024579 CCCATCGTTGACCGGGAAAG 61.025 60.000 6.32 0.17 41.62 2.62
573 583 1.229428 CAACAACACCTCTGCGATGT 58.771 50.000 0.00 0.00 0.00 3.06
582 593 2.043604 CTCTGCGATGTGGGGCCATA 62.044 60.000 4.39 0.00 0.00 2.74
583 594 1.152984 CTGCGATGTGGGGCCATAA 60.153 57.895 4.39 0.00 0.00 1.90
589 614 0.105555 ATGTGGGGCCATAATGGGTG 60.106 55.000 4.39 0.00 38.19 4.61
593 618 1.187567 GGGGCCATAATGGGTGATGC 61.188 60.000 4.39 0.00 38.19 3.91
596 621 2.440409 GGCCATAATGGGTGATGCTAG 58.560 52.381 0.00 0.00 38.19 3.42
600 625 3.328931 CCATAATGGGTGATGCTAGTCCT 59.671 47.826 0.00 0.00 32.67 3.85
606 631 3.266772 TGGGTGATGCTAGTCCTGATTTT 59.733 43.478 0.00 0.00 0.00 1.82
608 633 4.384647 GGGTGATGCTAGTCCTGATTTTCT 60.385 45.833 0.00 0.00 0.00 2.52
617 642 6.754675 GCTAGTCCTGATTTTCTGACTAGTTC 59.245 42.308 20.47 7.17 42.18 3.01
639 684 2.158885 TCGCCCGTCCATCATTATTTGA 60.159 45.455 0.00 0.00 39.12 2.69
642 687 4.385825 GCCCGTCCATCATTATTTGACTA 58.614 43.478 0.00 0.00 37.11 2.59
649 694 8.703336 CGTCCATCATTATTTGACTATACACAG 58.297 37.037 0.00 0.00 37.11 3.66
695 747 8.121305 TGAATAACACAAGATAGTTTGGCAAT 57.879 30.769 0.00 0.00 32.32 3.56
734 793 3.973425 AGTTGGATGGAAAGGAGGATTG 58.027 45.455 0.00 0.00 0.00 2.67
741 800 3.700538 TGGAAAGGAGGATTGTTGATGG 58.299 45.455 0.00 0.00 0.00 3.51
758 821 1.152715 GGAGGAGGGGAGTACGAGG 60.153 68.421 0.00 0.00 0.00 4.63
808 875 1.106285 GGGGGTGTGAATGAATGAGC 58.894 55.000 0.00 0.00 0.00 4.26
846 917 3.907788 CACGTGATGCACAACACAATAAG 59.092 43.478 10.90 6.23 36.91 1.73
847 918 2.910482 CGTGATGCACAACACAATAAGC 59.090 45.455 16.69 0.00 36.91 3.09
859 1360 5.059404 ACACAATAAGCAAAGGGAAATCG 57.941 39.130 0.00 0.00 0.00 3.34
860 1361 3.859386 CACAATAAGCAAAGGGAAATCGC 59.141 43.478 0.00 0.00 0.00 4.58
861 1362 3.509575 ACAATAAGCAAAGGGAAATCGCA 59.490 39.130 0.14 0.00 0.00 5.10
862 1363 4.021544 ACAATAAGCAAAGGGAAATCGCAA 60.022 37.500 0.14 0.00 0.00 4.85
863 1364 5.111293 CAATAAGCAAAGGGAAATCGCAAT 58.889 37.500 0.14 0.00 0.00 3.56
864 1365 6.127479 ACAATAAGCAAAGGGAAATCGCAATA 60.127 34.615 0.14 0.00 0.00 1.90
876 1399 5.333645 GGAAATCGCAATAGTATCACTGCTG 60.334 44.000 4.28 0.00 32.52 4.41
896 1420 1.407656 CCTGCCGGCCATCTACCTAA 61.408 60.000 26.77 0.00 0.00 2.69
899 1423 1.408453 GCCGGCCATCTACCTAACCT 61.408 60.000 18.11 0.00 0.00 3.50
900 1424 0.680061 CCGGCCATCTACCTAACCTC 59.320 60.000 2.24 0.00 0.00 3.85
901 1425 1.410004 CGGCCATCTACCTAACCTCA 58.590 55.000 2.24 0.00 0.00 3.86
902 1426 1.068741 CGGCCATCTACCTAACCTCAC 59.931 57.143 2.24 0.00 0.00 3.51
906 1430 3.901844 GCCATCTACCTAACCTCACCATA 59.098 47.826 0.00 0.00 0.00 2.74
908 1432 4.022242 CCATCTACCTAACCTCACCATACG 60.022 50.000 0.00 0.00 0.00 3.06
912 1436 2.104967 CCTAACCTCACCATACGTCCA 58.895 52.381 0.00 0.00 0.00 4.02
934 1466 3.109847 CGGGAGGAAGAGAGGAGAG 57.890 63.158 0.00 0.00 0.00 3.20
936 1468 0.930726 GGGAGGAAGAGAGGAGAGGA 59.069 60.000 0.00 0.00 0.00 3.71
938 1470 1.850345 GGAGGAAGAGAGGAGAGGAGA 59.150 57.143 0.00 0.00 0.00 3.71
952 1501 4.664677 GAGACCACGCCGCACACT 62.665 66.667 0.00 0.00 0.00 3.55
999 1548 3.625897 CTCCGCCCAGACACCACA 61.626 66.667 0.00 0.00 0.00 4.17
1013 1565 1.379176 CCACACCACACACCACCAA 60.379 57.895 0.00 0.00 0.00 3.67
1015 1567 0.891373 CACACCACACACCACCAAAA 59.109 50.000 0.00 0.00 0.00 2.44
1240 1807 2.754375 CCGTAAGCACCAACCCCT 59.246 61.111 0.00 0.00 0.00 4.79
1290 1880 0.686789 CTCCATGGACGGGCATGATA 59.313 55.000 11.44 0.00 0.00 2.15
1395 2077 9.745880 AGTATTCAGTACCACTACAATTATTCG 57.254 33.333 0.00 0.00 33.58 3.34
1428 2110 2.562298 CCCTGCCTGCTTTGTTAATTCA 59.438 45.455 0.00 0.00 0.00 2.57
1429 2111 3.367703 CCCTGCCTGCTTTGTTAATTCAG 60.368 47.826 0.00 0.00 0.00 3.02
1430 2112 3.507233 CCTGCCTGCTTTGTTAATTCAGA 59.493 43.478 0.00 0.00 0.00 3.27
1432 2114 5.357878 CCTGCCTGCTTTGTTAATTCAGATA 59.642 40.000 0.00 0.00 0.00 1.98
1470 2156 1.883275 TGCAAAATAACACTGGACGGG 59.117 47.619 0.00 0.00 0.00 5.28
1483 2169 2.978824 ACGGGTTGATCCAGTCCG 59.021 61.111 10.83 10.83 40.44 4.79
1526 2212 3.837355 AGGATTAATTCAGTCATGCCCC 58.163 45.455 0.00 0.00 0.00 5.80
1527 2213 3.464833 AGGATTAATTCAGTCATGCCCCT 59.535 43.478 0.00 0.00 0.00 4.79
1528 2214 3.571401 GGATTAATTCAGTCATGCCCCTG 59.429 47.826 0.00 0.00 0.00 4.45
1530 2216 1.033746 AATTCAGTCATGCCCCTGCG 61.034 55.000 0.00 0.00 41.78 5.18
1535 2221 4.916293 TCATGCCCCTGCGCGATC 62.916 66.667 12.10 0.00 41.78 3.69
1540 2226 4.489771 CCCCTGCGCGATCCCTTT 62.490 66.667 12.10 0.00 0.00 3.11
1541 2227 2.897350 CCCTGCGCGATCCCTTTC 60.897 66.667 12.10 0.00 0.00 2.62
1624 2310 2.253452 CTGTGCAGCGCAAAGGAC 59.747 61.111 11.47 11.28 39.98 3.85
1625 2311 2.203195 TGTGCAGCGCAAAGGACT 60.203 55.556 11.47 0.00 41.47 3.85
1626 2312 1.789078 CTGTGCAGCGCAAAGGACTT 61.789 55.000 11.47 0.00 39.98 3.01
1627 2313 1.081840 GTGCAGCGCAAAGGACTTC 60.082 57.895 11.47 0.00 41.47 3.01
1639 2325 5.352569 CGCAAAGGACTTCATTCTCTGTATT 59.647 40.000 0.00 0.00 0.00 1.89
1648 2334 3.796717 TCATTCTCTGTATTTAGCACGCG 59.203 43.478 3.53 3.53 0.00 6.01
1649 2335 1.556564 TCTCTGTATTTAGCACGCGC 58.443 50.000 5.73 0.00 38.99 6.86
1665 2351 4.785341 GCACGCGCTAGTTTAATAATTGCT 60.785 41.667 5.73 0.00 34.30 3.91
1667 2353 4.211389 CGCGCTAGTTTAATAATTGCTGG 58.789 43.478 5.56 0.00 0.00 4.85
1668 2354 3.975035 GCGCTAGTTTAATAATTGCTGGC 59.025 43.478 0.00 0.00 0.00 4.85
1670 2356 5.418310 GCTAGTTTAATAATTGCTGGCGA 57.582 39.130 0.00 0.00 0.00 5.54
1725 2421 1.709711 TGGATGCTCCACCTCCCTA 59.290 57.895 1.25 0.00 42.67 3.53
1740 2436 3.118592 CCTCCCTACTCTGGTTGTGATTC 60.119 52.174 0.00 0.00 0.00 2.52
1784 2482 6.432472 AGGATTCCACTCATTCTCAACTTTTC 59.568 38.462 5.29 0.00 0.00 2.29
1790 2492 6.148480 CCACTCATTCTCAACTTTTCCAGTAG 59.852 42.308 0.00 0.00 32.94 2.57
1800 2502 0.328258 TTTCCAGTAGCCCCTTCTGC 59.672 55.000 0.00 0.00 29.44 4.26
1851 2553 4.534168 CTTTCATGAGCATGCTTATTCGG 58.466 43.478 23.61 11.52 38.65 4.30
1860 2562 2.032680 TGCTTATTCGGTTACCAGGC 57.967 50.000 1.13 0.00 0.00 4.85
1864 2601 0.179468 TATTCGGTTACCAGGCCTGC 59.821 55.000 28.39 13.49 0.00 4.85
1869 2606 1.971695 GTTACCAGGCCTGCGCTTT 60.972 57.895 28.39 10.45 34.44 3.51
1870 2607 0.675522 GTTACCAGGCCTGCGCTTTA 60.676 55.000 28.39 9.45 34.44 1.85
1874 2611 2.109126 CAGGCCTGCGCTTTACCTC 61.109 63.158 22.33 0.00 34.44 3.85
1877 2614 1.369839 GGCCTGCGCTTTACCTCTTC 61.370 60.000 9.73 0.00 34.44 2.87
1885 2622 2.345942 CGCTTTACCTCTTCGAAGCTTC 59.654 50.000 20.56 16.84 41.65 3.86
1891 2628 2.891580 ACCTCTTCGAAGCTTCACAGTA 59.108 45.455 25.47 6.34 0.00 2.74
1898 2635 2.143925 GAAGCTTCACAGTACACCCAC 58.856 52.381 21.67 0.00 0.00 4.61
1899 2636 0.396811 AGCTTCACAGTACACCCACC 59.603 55.000 0.00 0.00 0.00 4.61
1912 2649 4.655921 CCACCGTATGGCCAATGT 57.344 55.556 10.96 1.03 43.24 2.71
1914 2651 1.181786 CCACCGTATGGCCAATGTTT 58.818 50.000 10.96 0.00 43.24 2.83
1928 2665 4.201950 GCCAATGTTTAGATACTGCCACAG 60.202 45.833 0.00 0.00 37.52 3.66
1938 2675 4.656112 AGATACTGCCACAGCTACCTATTT 59.344 41.667 0.00 0.00 40.80 1.40
1948 2685 6.483640 CCACAGCTACCTATTTATTTCAGTCC 59.516 42.308 0.00 0.00 0.00 3.85
1972 2710 5.880901 TCCCAAAGACTCTTCTTAGCAAAT 58.119 37.500 0.00 0.00 41.56 2.32
1976 2714 7.174946 CCCAAAGACTCTTCTTAGCAAATGTTA 59.825 37.037 0.00 0.00 41.56 2.41
1982 2722 7.649057 ACTCTTCTTAGCAAATGTTAAACACC 58.351 34.615 0.00 0.00 0.00 4.16
1983 2723 7.284489 ACTCTTCTTAGCAAATGTTAAACACCA 59.716 33.333 0.00 0.00 0.00 4.17
2010 2750 3.418684 ACTGTCGCCTAGTTTTGGATT 57.581 42.857 0.00 0.00 0.00 3.01
2018 2758 4.567159 CGCCTAGTTTTGGATTCTGTACTC 59.433 45.833 0.00 0.00 0.00 2.59
2020 2760 6.405508 CGCCTAGTTTTGGATTCTGTACTCTA 60.406 42.308 0.00 0.00 0.00 2.43
2021 2761 6.757478 GCCTAGTTTTGGATTCTGTACTCTAC 59.243 42.308 0.00 0.00 0.00 2.59
2022 2762 7.363968 GCCTAGTTTTGGATTCTGTACTCTACT 60.364 40.741 0.00 0.00 0.00 2.57
2023 2763 8.532819 CCTAGTTTTGGATTCTGTACTCTACTT 58.467 37.037 0.00 0.00 0.00 2.24
2024 2764 9.360093 CTAGTTTTGGATTCTGTACTCTACTTG 57.640 37.037 0.00 0.00 0.00 3.16
2047 2791 7.009179 TGAGATGTTTCTATCAGGTTGAAGT 57.991 36.000 0.00 0.00 30.30 3.01
2060 2804 7.581213 TCAGGTTGAAGTATGTTTTGTTCAT 57.419 32.000 0.00 0.00 0.00 2.57
2063 2807 7.379529 CAGGTTGAAGTATGTTTTGTTCATGTC 59.620 37.037 0.00 0.00 0.00 3.06
2065 2809 7.867403 GGTTGAAGTATGTTTTGTTCATGTCAT 59.133 33.333 0.00 0.00 0.00 3.06
2066 2810 8.693504 GTTGAAGTATGTTTTGTTCATGTCATG 58.306 33.333 6.47 6.47 0.00 3.07
2067 2811 6.862608 TGAAGTATGTTTTGTTCATGTCATGC 59.137 34.615 8.03 0.00 0.00 4.06
2068 2812 6.579666 AGTATGTTTTGTTCATGTCATGCT 57.420 33.333 8.03 0.00 0.00 3.79
2086 2830 0.674581 CTGATGACGGCTGGCAGAAA 60.675 55.000 20.86 0.00 0.00 2.52
2087 2831 0.250684 TGATGACGGCTGGCAGAAAA 60.251 50.000 20.86 0.00 0.00 2.29
2092 2836 1.172812 ACGGCTGGCAGAAAAGGTTC 61.173 55.000 20.86 0.00 0.00 3.62
2107 2854 9.013490 CAGAAAAGGTTCGCTTATATTGAATTG 57.987 33.333 0.00 0.00 38.90 2.32
2108 2855 7.702348 AGAAAAGGTTCGCTTATATTGAATTGC 59.298 33.333 0.00 0.00 38.90 3.56
2109 2856 6.699575 AAGGTTCGCTTATATTGAATTGCT 57.300 33.333 0.00 0.00 0.00 3.91
2110 2857 6.699575 AGGTTCGCTTATATTGAATTGCTT 57.300 33.333 0.00 0.00 0.00 3.91
2111 2858 7.100458 AGGTTCGCTTATATTGAATTGCTTT 57.900 32.000 0.00 0.00 0.00 3.51
2112 2859 6.974622 AGGTTCGCTTATATTGAATTGCTTTG 59.025 34.615 0.00 0.00 0.00 2.77
2113 2860 6.291796 GGTTCGCTTATATTGAATTGCTTTGC 60.292 38.462 0.00 0.00 0.00 3.68
2114 2861 5.889219 TCGCTTATATTGAATTGCTTTGCA 58.111 33.333 0.00 0.00 36.47 4.08
2241 2988 2.126307 CGTCTCACAGGTCCTGCG 60.126 66.667 19.40 9.91 34.37 5.18
2250 2997 4.864334 GGTCCTGCGGATGCCCAG 62.864 72.222 0.00 0.00 41.78 4.45
2265 3013 3.305516 CAGCACCAACCCCAAGCC 61.306 66.667 0.00 0.00 0.00 4.35
2268 3016 2.140138 GCACCAACCCCAAGCCTTT 61.140 57.895 0.00 0.00 0.00 3.11
2271 3019 0.264657 ACCAACCCCAAGCCTTTTCT 59.735 50.000 0.00 0.00 0.00 2.52
2274 3022 2.490902 CCAACCCCAAGCCTTTTCTAGT 60.491 50.000 0.00 0.00 0.00 2.57
2325 3075 8.768501 ATGTACTCTTGACTGATATACTTCCA 57.231 34.615 0.00 0.00 0.00 3.53
2330 3080 9.201989 ACTCTTGACTGATATACTTCCATGTTA 57.798 33.333 0.00 0.00 0.00 2.41
2380 3130 2.873133 ACTTGCTGAGGCTATACGTC 57.127 50.000 0.00 0.00 39.59 4.34
2389 3139 1.453762 GGCTATACGTCGACCAGCCT 61.454 60.000 25.98 6.86 46.70 4.58
2420 3171 5.848286 TGATCTCCATTGGGTATGCTATT 57.152 39.130 2.09 0.00 34.93 1.73
2421 3172 5.563592 TGATCTCCATTGGGTATGCTATTG 58.436 41.667 2.09 0.00 34.93 1.90
2426 3177 5.324409 TCCATTGGGTATGCTATTGATTCC 58.676 41.667 2.09 0.00 34.93 3.01
2429 3180 6.071728 CCATTGGGTATGCTATTGATTCCTTC 60.072 42.308 0.00 0.00 32.60 3.46
2430 3181 4.985538 TGGGTATGCTATTGATTCCTTCC 58.014 43.478 0.00 0.00 0.00 3.46
2433 3184 5.649831 GGGTATGCTATTGATTCCTTCCATC 59.350 44.000 0.00 0.00 0.00 3.51
2440 3191 6.150809 GCTATTGATTCCTTCCATCCTCATTC 59.849 42.308 0.00 0.00 0.00 2.67
2447 3198 4.141321 TCCTTCCATCCTCATTCCTCAATG 60.141 45.833 0.00 0.00 40.91 2.82
2448 3199 3.219176 TCCATCCTCATTCCTCAATGC 57.781 47.619 0.00 0.00 39.56 3.56
2449 3200 2.510800 TCCATCCTCATTCCTCAATGCA 59.489 45.455 0.00 0.00 39.56 3.96
2452 3203 4.458295 CCATCCTCATTCCTCAATGCATAC 59.542 45.833 0.00 0.00 39.56 2.39
2454 3205 4.711399 TCCTCATTCCTCAATGCATACAG 58.289 43.478 0.00 0.00 39.56 2.74
2481 3232 2.362077 ACACATTTGGCTGTTCTTCACC 59.638 45.455 0.00 0.00 0.00 4.02
2485 3236 1.679139 TTGGCTGTTCTTCACCTGTG 58.321 50.000 0.00 0.00 0.00 3.66
2491 3242 3.365364 GCTGTTCTTCACCTGTGTTATGC 60.365 47.826 0.00 0.00 0.00 3.14
2492 3243 3.146066 TGTTCTTCACCTGTGTTATGCC 58.854 45.455 0.00 0.00 0.00 4.40
2493 3244 3.181445 TGTTCTTCACCTGTGTTATGCCT 60.181 43.478 0.00 0.00 0.00 4.75
2495 3246 4.901197 TCTTCACCTGTGTTATGCCTTA 57.099 40.909 0.00 0.00 0.00 2.69
2497 3248 5.185454 TCTTCACCTGTGTTATGCCTTATG 58.815 41.667 0.00 0.00 0.00 1.90
2498 3249 4.568072 TCACCTGTGTTATGCCTTATGT 57.432 40.909 0.00 0.00 0.00 2.29
2500 3251 3.016736 ACCTGTGTTATGCCTTATGTGC 58.983 45.455 0.00 0.00 0.00 4.57
2501 3252 3.282021 CCTGTGTTATGCCTTATGTGCT 58.718 45.455 0.00 0.00 0.00 4.40
2502 3253 3.065786 CCTGTGTTATGCCTTATGTGCTG 59.934 47.826 0.00 0.00 0.00 4.41
2503 3254 2.423185 TGTGTTATGCCTTATGTGCTGC 59.577 45.455 0.00 0.00 0.00 5.25
2504 3255 1.670295 TGTTATGCCTTATGTGCTGCG 59.330 47.619 0.00 0.00 0.00 5.18
2505 3256 1.002468 GTTATGCCTTATGTGCTGCGG 60.002 52.381 0.00 0.00 0.00 5.69
2506 3257 0.467804 TATGCCTTATGTGCTGCGGA 59.532 50.000 0.00 0.00 0.00 5.54
2507 3258 0.179009 ATGCCTTATGTGCTGCGGAT 60.179 50.000 0.00 0.00 0.00 4.18
2508 3259 1.096967 TGCCTTATGTGCTGCGGATG 61.097 55.000 0.00 0.00 0.00 3.51
2509 3260 1.097547 GCCTTATGTGCTGCGGATGT 61.098 55.000 0.00 0.00 0.00 3.06
2510 3261 0.659427 CCTTATGTGCTGCGGATGTG 59.341 55.000 0.00 0.00 0.00 3.21
2511 3262 0.028505 CTTATGTGCTGCGGATGTGC 59.971 55.000 0.00 0.00 0.00 4.57
2512 3263 0.392863 TTATGTGCTGCGGATGTGCT 60.393 50.000 0.00 0.00 35.36 4.40
2513 3264 0.811219 TATGTGCTGCGGATGTGCTC 60.811 55.000 0.00 0.00 35.36 4.26
2514 3265 2.743538 GTGCTGCGGATGTGCTCA 60.744 61.111 0.00 0.00 35.36 4.26
2515 3266 2.032376 TGCTGCGGATGTGCTCAA 59.968 55.556 0.00 0.00 35.36 3.02
2516 3267 2.036571 TGCTGCGGATGTGCTCAAG 61.037 57.895 0.00 0.00 35.36 3.02
2517 3268 2.789917 CTGCGGATGTGCTCAAGC 59.210 61.111 0.00 0.00 42.50 4.01
2518 3269 2.747460 TGCGGATGTGCTCAAGCC 60.747 61.111 0.00 6.43 41.18 4.35
2519 3270 2.437359 GCGGATGTGCTCAAGCCT 60.437 61.111 0.00 0.00 41.18 4.58
2520 3271 1.153369 GCGGATGTGCTCAAGCCTA 60.153 57.895 0.00 0.00 41.18 3.93
2521 3272 1.432270 GCGGATGTGCTCAAGCCTAC 61.432 60.000 0.00 0.00 41.18 3.18
2522 3273 0.108186 CGGATGTGCTCAAGCCTACA 60.108 55.000 0.00 0.00 41.18 2.74
2523 3274 1.661341 GGATGTGCTCAAGCCTACAG 58.339 55.000 0.00 0.00 41.18 2.74
2524 3275 1.208052 GGATGTGCTCAAGCCTACAGA 59.792 52.381 0.00 0.00 41.18 3.41
2535 3286 3.258971 AGCCTACAGATTGCTTCTCAC 57.741 47.619 0.00 0.00 29.93 3.51
2536 3287 2.568956 AGCCTACAGATTGCTTCTCACA 59.431 45.455 0.00 0.00 29.93 3.58
2560 3311 4.775236 AGATGTAGAATCCTTTGCCACTC 58.225 43.478 0.00 0.00 0.00 3.51
2642 3398 0.169672 CTTTGTGCAGGCTTCATCCG 59.830 55.000 0.00 0.00 0.00 4.18
2677 3433 6.798427 TCTGATAAGTTTATCCTCAGTGCT 57.202 37.500 8.89 0.00 38.98 4.40
2873 3634 3.056607 GTCATGGTTCAAATGTTCAGGGG 60.057 47.826 0.00 0.00 0.00 4.79
2967 3729 6.775708 AGCAAGGTAACATCTTGTAAACCTA 58.224 36.000 12.44 0.00 42.56 3.08
3016 3785 4.642885 TGCTTCCTTAATTATGTTTCCCCG 59.357 41.667 0.00 0.00 0.00 5.73
3021 3790 4.440940 CCTTAATTATGTTTCCCCGGCAAC 60.441 45.833 0.00 0.00 0.00 4.17
3023 3792 0.406361 TTATGTTTCCCCGGCAACCT 59.594 50.000 0.00 0.00 0.00 3.50
3056 3825 1.555967 GGCCTCCTTTTGCATGGTTA 58.444 50.000 0.00 0.00 0.00 2.85
3057 3826 2.110578 GGCCTCCTTTTGCATGGTTAT 58.889 47.619 0.00 0.00 0.00 1.89
3072 3841 5.448654 CATGGTTATTGATTTCCCCTCTCA 58.551 41.667 0.00 0.00 0.00 3.27
3096 3865 3.889692 CAGTGGTGGCCTGGTGGT 61.890 66.667 3.32 0.00 35.27 4.16
3123 3892 1.580845 AAGCTTCCACGCATGCAGTC 61.581 55.000 19.57 4.61 0.00 3.51
3194 3963 4.460948 AAGCCTTCTGCATTTTATGGTG 57.539 40.909 0.00 0.00 44.83 4.17
3195 3964 3.434309 AGCCTTCTGCATTTTATGGTGT 58.566 40.909 0.00 0.00 44.83 4.16
3196 3965 3.445096 AGCCTTCTGCATTTTATGGTGTC 59.555 43.478 0.00 0.00 44.83 3.67
3197 3966 3.731867 GCCTTCTGCATTTTATGGTGTCG 60.732 47.826 0.00 0.00 40.77 4.35
3198 3967 3.440173 CCTTCTGCATTTTATGGTGTCGT 59.560 43.478 0.00 0.00 0.00 4.34
3201 3970 6.348950 CCTTCTGCATTTTATGGTGTCGTTTA 60.349 38.462 0.00 0.00 0.00 2.01
3203 3972 6.607689 TCTGCATTTTATGGTGTCGTTTAAG 58.392 36.000 0.00 0.00 0.00 1.85
3204 3973 6.205853 TCTGCATTTTATGGTGTCGTTTAAGT 59.794 34.615 0.00 0.00 0.00 2.24
3207 3978 5.692613 TTTTATGGTGTCGTTTAAGTGGG 57.307 39.130 0.00 0.00 0.00 4.61
3232 4003 3.799366 TCCTTTGCGAACTGTAACTCAA 58.201 40.909 0.00 0.00 0.00 3.02
3234 4005 3.560068 CCTTTGCGAACTGTAACTCAAGT 59.440 43.478 0.00 0.00 0.00 3.16
3293 4064 1.393603 TAGATGACCACTCTCCGCTG 58.606 55.000 0.00 0.00 0.00 5.18
3308 4079 1.376037 GCTGCCTGGCGTTACTCTT 60.376 57.895 14.98 0.00 0.00 2.85
3320 4091 3.002348 GCGTTACTCTTGGTGATATTGGC 59.998 47.826 0.00 0.00 0.00 4.52
3341 4112 1.075301 AAAGTTTGGCAGTGGGGCT 60.075 52.632 0.00 0.00 43.83 5.19
3640 4422 1.888512 GATGCTTCCAAGGCTTTGTCA 59.111 47.619 7.87 0.81 32.21 3.58
3697 4479 2.544726 GAAGCAGTTCGGTTCCCAG 58.455 57.895 0.00 0.00 44.72 4.45
3737 4519 3.258372 TCAGGTACTACAGTCAGCCTTTG 59.742 47.826 0.00 0.00 36.02 2.77
3970 4752 2.810650 CTGAAGTGGCTATACACGGAC 58.189 52.381 0.00 0.00 45.80 4.79
4084 4866 8.004344 GCAACAGCTGTACGTATAATCAATTAG 58.996 37.037 22.01 0.00 0.00 1.73
4089 4871 9.464714 AGCTGTACGTATAATCAATTAGTTCAG 57.535 33.333 0.00 0.00 31.05 3.02
4109 4902 8.917088 AGTTCAGCAATGCCTTAACAATTATAT 58.083 29.630 14.44 0.00 0.00 0.86
4133 4926 6.687081 TTGTTTCCTCGTTTGTACTGATTT 57.313 33.333 0.00 0.00 0.00 2.17
4134 4927 6.055231 TGTTTCCTCGTTTGTACTGATTTG 57.945 37.500 0.00 0.00 0.00 2.32
4137 4930 3.496884 TCCTCGTTTGTACTGATTTGTGC 59.503 43.478 0.00 0.00 0.00 4.57
4201 5015 3.620488 TGTCAACCAAAAACTGAGCTCT 58.380 40.909 16.19 0.00 0.00 4.09
4212 5026 4.936685 AACTGAGCTCTAAATTTCCCCT 57.063 40.909 16.19 0.00 0.00 4.79
4215 5029 4.538089 ACTGAGCTCTAAATTTCCCCTCTT 59.462 41.667 16.19 0.00 0.00 2.85
4258 5087 4.305539 TCTTGATGAAGCTCCATTGGAA 57.694 40.909 6.88 0.00 0.00 3.53
4260 5089 3.438216 TGATGAAGCTCCATTGGAACA 57.562 42.857 6.88 5.58 0.00 3.18
4263 5092 5.698104 TGATGAAGCTCCATTGGAACATAT 58.302 37.500 6.88 0.00 39.30 1.78
4324 5153 3.090210 AGGATTTCACATGCATGGTCA 57.910 42.857 29.41 10.75 0.00 4.02
4401 5231 4.023193 GCTAGTCTCTCTCTTATGCAGGAC 60.023 50.000 0.00 0.00 0.00 3.85
4431 5261 2.669569 TGCCGAAAGCTCTGTGGC 60.670 61.111 11.16 11.16 45.91 5.01
4672 5504 4.641645 CCGTTGCTCAGGTGGCCA 62.642 66.667 0.00 0.00 0.00 5.36
4719 5551 3.696045 AGCTTACATGGGCAACATACAA 58.304 40.909 0.00 0.00 37.84 2.41
4776 5608 4.462483 GGTATGCAGCTAGCTAGATCTTCT 59.538 45.833 25.15 8.43 45.94 2.85
4777 5609 5.650266 GGTATGCAGCTAGCTAGATCTTCTA 59.350 44.000 25.15 4.20 45.94 2.10
4820 5654 7.334090 ACATAACTTCTGCAACTGTATGAGAT 58.666 34.615 9.71 0.00 0.00 2.75
4837 5671 5.227569 TGAGATGTTTTTGTCTGGAGCTA 57.772 39.130 0.00 0.00 0.00 3.32
4843 5677 6.131544 TGTTTTTGTCTGGAGCTACTTTTC 57.868 37.500 0.00 0.00 0.00 2.29
4858 5692 2.480419 ACTTTTCGGTGAAGCGATTGAG 59.520 45.455 5.34 6.76 0.00 3.02
4874 5708 2.070262 TGAGCTTGTGACTGATCGTG 57.930 50.000 0.00 0.00 0.00 4.35
4880 5714 3.861131 GCTTGTGACTGATCGTGGTACTT 60.861 47.826 0.00 0.00 0.00 2.24
5031 5865 1.748493 GAAGAAGGTTGGTGTTGCACA 59.252 47.619 1.61 0.00 35.86 4.57
5033 5867 3.222173 AGAAGGTTGGTGTTGCACATA 57.778 42.857 1.61 0.00 35.86 2.29
5034 5868 3.149196 AGAAGGTTGGTGTTGCACATAG 58.851 45.455 1.61 0.00 35.86 2.23
5044 5881 5.181056 TGGTGTTGCACATAGTCAGTAATTG 59.819 40.000 1.61 0.00 35.86 2.32
5045 5882 5.411361 GGTGTTGCACATAGTCAGTAATTGA 59.589 40.000 1.61 0.00 35.86 2.57
5052 5889 8.236586 TGCACATAGTCAGTAATTGAAAACATC 58.763 33.333 0.00 0.00 37.61 3.06
5093 5930 7.418337 TGTAGCATCTCTTGGTGAATTACTA 57.582 36.000 0.00 0.00 37.26 1.82
5151 5990 2.291043 TTTCTCCGAGCTGTCCCCC 61.291 63.158 0.00 0.00 0.00 5.40
5160 5999 2.750350 CTGTCCCCCGACTTGCTT 59.250 61.111 0.00 0.00 39.94 3.91
5169 6008 1.670406 CGACTTGCTTGAGGCTGCT 60.670 57.895 0.00 0.00 42.39 4.24
5193 6032 1.741732 GCTCACGTCCAGCTGATCATT 60.742 52.381 17.39 0.00 33.75 2.57
5208 6047 4.717877 TGATCATTGTGACCAAGTGAGTT 58.282 39.130 0.00 0.00 33.17 3.01
5211 6050 4.269183 TCATTGTGACCAAGTGAGTTGTT 58.731 39.130 0.00 0.00 33.87 2.83
5214 6053 1.065551 GTGACCAAGTGAGTTGTTGGC 59.934 52.381 0.00 0.00 46.25 4.52
5215 6054 1.064758 TGACCAAGTGAGTTGTTGGCT 60.065 47.619 0.00 0.00 46.25 4.75
5216 6055 1.334869 GACCAAGTGAGTTGTTGGCTG 59.665 52.381 0.00 0.00 46.25 4.85
5217 6056 0.670162 CCAAGTGAGTTGTTGGCTGG 59.330 55.000 0.00 0.00 37.02 4.85
5218 6057 0.670162 CAAGTGAGTTGTTGGCTGGG 59.330 55.000 0.00 0.00 0.00 4.45
5220 6059 1.152756 GTGAGTTGTTGGCTGGGGT 60.153 57.895 0.00 0.00 0.00 4.95
5244 6093 4.042809 TGCTGTATATCCATTTTCCGGGAT 59.957 41.667 0.00 0.00 45.60 3.85
5267 6116 5.665916 AACCCAATCATTCAGTTCATTCC 57.334 39.130 0.00 0.00 0.00 3.01
5271 6120 5.067413 CCCAATCATTCAGTTCATTCCTCTG 59.933 44.000 0.00 0.00 0.00 3.35
5355 6204 0.604780 TGAAGGAGCAGCTGCAGAAC 60.605 55.000 38.24 24.19 45.16 3.01
5385 6234 4.129737 TACGCGCTCCACCTGCTC 62.130 66.667 5.73 0.00 0.00 4.26
5502 6354 3.565764 AGAATCAAGGCCAATCGATCA 57.434 42.857 5.01 0.00 0.00 2.92
5504 6356 4.467769 AGAATCAAGGCCAATCGATCAAT 58.532 39.130 5.01 0.00 0.00 2.57
5519 6371 4.848757 CGATCAATCGTATGACAGACAGA 58.151 43.478 4.25 0.00 44.74 3.41
5520 6372 4.672862 CGATCAATCGTATGACAGACAGAC 59.327 45.833 4.25 0.00 44.74 3.51
5523 6422 4.217550 TCAATCGTATGACAGACAGACACA 59.782 41.667 0.52 0.00 40.29 3.72
5536 6435 0.669077 AGACACAGTCGACGAAGCTT 59.331 50.000 10.46 0.00 37.67 3.74
5539 6438 1.593006 ACACAGTCGACGAAGCTTTTG 59.407 47.619 10.46 2.65 0.00 2.44
5565 6464 2.038952 TCCATGGACTGAACTGAACTGG 59.961 50.000 11.44 0.00 0.00 4.00
5848 6784 3.244770 ACAAGGAAAGAGGCGATTGGTTA 60.245 43.478 0.00 0.00 0.00 2.85
5856 6792 4.331968 AGAGGCGATTGGTTATTGTTGAA 58.668 39.130 0.00 0.00 0.00 2.69
5894 6830 1.364171 GGACACACAGACAGACGCT 59.636 57.895 0.00 0.00 0.00 5.07
5903 6839 2.100916 ACAGACAGACGCTGTTGTTAGT 59.899 45.455 12.63 6.14 45.44 2.24
5915 6851 7.803724 ACGCTGTTGTTAGTAGAAATAAAAGG 58.196 34.615 0.00 0.00 0.00 3.11
5916 6852 7.658575 ACGCTGTTGTTAGTAGAAATAAAAGGA 59.341 33.333 0.00 0.00 0.00 3.36
5918 6854 9.989869 GCTGTTGTTAGTAGAAATAAAAGGATC 57.010 33.333 0.00 0.00 0.00 3.36
5924 6870 8.541312 GTTAGTAGAAATAAAAGGATCGTGCTC 58.459 37.037 0.00 0.00 0.00 4.26
5984 6954 3.773860 TGGTTAATGCATGTTTAGCCG 57.226 42.857 0.00 0.00 33.88 5.52
6079 7059 6.077322 GGAAAATGGGGAGAATAATGGATGA 58.923 40.000 0.00 0.00 0.00 2.92
6088 7068 7.212274 GGGAGAATAATGGATGAAATGGTTTG 58.788 38.462 0.00 0.00 0.00 2.93
6101 7081 9.710900 GATGAAATGGTTTGTCTTAAATTTCCT 57.289 29.630 0.00 0.00 34.59 3.36
6131 7111 8.579850 TTTTTCTATCTAGGTGCATTCATGTT 57.420 30.769 0.00 0.00 0.00 2.71
6132 7112 7.558161 TTTCTATCTAGGTGCATTCATGTTG 57.442 36.000 0.00 0.00 0.00 3.33
6133 7113 5.059161 TCTATCTAGGTGCATTCATGTTGC 58.941 41.667 14.02 14.02 40.55 4.17
6135 7115 3.273434 TCTAGGTGCATTCATGTTGCTC 58.727 45.455 19.21 16.26 40.77 4.26
6136 7116 2.211250 AGGTGCATTCATGTTGCTCT 57.789 45.000 19.21 14.73 40.77 4.09
6137 7117 2.522185 AGGTGCATTCATGTTGCTCTT 58.478 42.857 19.21 12.15 40.77 2.85
6140 7120 4.060205 GGTGCATTCATGTTGCTCTTTTT 58.940 39.130 19.21 0.00 40.77 1.94
6141 7121 5.010922 AGGTGCATTCATGTTGCTCTTTTTA 59.989 36.000 19.21 0.95 40.77 1.52
6175 7166 0.394938 TAGCAAAAGGACCTGTGCGA 59.605 50.000 19.66 14.38 41.90 5.10
6287 7279 7.765360 TCACAAATGCAAGAGAATGTTTCTTTT 59.235 29.630 0.00 0.00 40.87 2.27
6288 7280 8.392612 CACAAATGCAAGAGAATGTTTCTTTTT 58.607 29.630 0.00 0.00 40.87 1.94
6436 7435 8.603898 ACATACTATAATATTCCGATCCACCA 57.396 34.615 0.00 0.00 0.00 4.17
6645 7650 5.614923 TCTTTTGAATCGGCGAACAATTA 57.385 34.783 24.80 17.58 0.00 1.40
6659 7664 8.873830 CGGCGAACAATTATAGAATAGATGAAT 58.126 33.333 0.00 0.00 0.00 2.57
6735 7746 6.367969 GCAAGAACATTTTCTGAATCAGCAAT 59.632 34.615 5.18 3.73 41.56 3.56
6736 7747 7.095355 GCAAGAACATTTTCTGAATCAGCAATT 60.095 33.333 5.18 0.00 41.56 2.32
6737 7748 8.770828 CAAGAACATTTTCTGAATCAGCAATTT 58.229 29.630 5.18 4.45 41.56 1.82
6738 7749 8.306680 AGAACATTTTCTGAATCAGCAATTTG 57.693 30.769 5.18 5.18 40.82 2.32
6741 7756 8.441312 ACATTTTCTGAATCAGCAATTTGTTT 57.559 26.923 5.18 0.00 0.00 2.83
6748 7763 7.107834 TGAATCAGCAATTTGTTTTGAATCG 57.892 32.000 0.00 0.00 0.00 3.34
6755 7770 8.486383 CAGCAATTTGTTTTGAATCGATAAACA 58.514 29.630 17.07 17.07 39.30 2.83
6762 7777 7.836512 TGTTTTGAATCGATAAACACTTTTGC 58.163 30.769 17.07 0.00 36.98 3.68
6767 7782 8.005662 TGAATCGATAAACACTTTTGCAATTG 57.994 30.769 0.00 0.00 0.00 2.32
6771 7786 5.164196 CGATAAACACTTTTGCAATTGACGG 60.164 40.000 10.34 0.00 0.00 4.79
6783 7800 7.861176 TTGCAATTGACGGACTATTTTAAAC 57.139 32.000 10.34 0.00 0.00 2.01
6785 7802 7.426410 TGCAATTGACGGACTATTTTAAACAA 58.574 30.769 10.34 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.186047 GTCGAACGGGCATGGACG 61.186 66.667 0.00 0.00 0.00 4.79
20 21 1.542915 TCTAAACTCAGGTCGAACGGG 59.457 52.381 0.00 0.00 0.00 5.28
26 27 7.258441 TCAATTCACTATCTAAACTCAGGTCG 58.742 38.462 0.00 0.00 0.00 4.79
29 30 6.481644 GGCTCAATTCACTATCTAAACTCAGG 59.518 42.308 0.00 0.00 0.00 3.86
37 38 4.588951 ACATCGGGCTCAATTCACTATCTA 59.411 41.667 0.00 0.00 0.00 1.98
42 43 1.407437 GGACATCGGGCTCAATTCACT 60.407 52.381 0.00 0.00 0.00 3.41
56 58 4.381411 GAGTAGCAACCCATTAGGACATC 58.619 47.826 0.00 0.00 39.89 3.06
60 62 2.124411 GGGAGTAGCAACCCATTAGGA 58.876 52.381 0.00 0.00 44.96 2.94
67 69 3.708013 GCTATGGGAGTAGCAACCC 57.292 57.895 0.00 0.00 45.03 4.11
72 74 4.207165 TCCAAAAATGCTATGGGAGTAGC 58.793 43.478 0.00 0.00 45.71 3.58
96 101 6.811954 TCGCATACTCATATTAACCACTTGA 58.188 36.000 0.00 0.00 0.00 3.02
98 103 7.715249 ACAATCGCATACTCATATTAACCACTT 59.285 33.333 0.00 0.00 0.00 3.16
99 104 7.217200 ACAATCGCATACTCATATTAACCACT 58.783 34.615 0.00 0.00 0.00 4.00
162 169 4.280819 ACCAAATAGGATTGATGGGTGTG 58.719 43.478 0.00 0.00 41.22 3.82
163 170 4.608170 ACCAAATAGGATTGATGGGTGT 57.392 40.909 0.00 0.00 41.22 4.16
181 188 0.538516 CCGGAATCCCACACAAACCA 60.539 55.000 0.00 0.00 0.00 3.67
187 194 0.463833 GGATGTCCGGAATCCCACAC 60.464 60.000 24.25 10.57 38.13 3.82
188 195 1.912220 GGATGTCCGGAATCCCACA 59.088 57.895 24.25 12.66 38.13 4.17
189 196 4.878878 GGATGTCCGGAATCCCAC 57.121 61.111 24.25 7.84 38.13 4.61
210 217 3.885297 GTCACCAAATATCCATGGACCAG 59.115 47.826 18.99 5.57 39.12 4.00
215 222 3.490348 GGGAGTCACCAAATATCCATGG 58.510 50.000 4.97 4.97 42.60 3.66
217 224 2.777692 ACGGGAGTCACCAAATATCCAT 59.222 45.455 0.00 0.00 40.62 3.41
222 229 1.979308 TCCAACGGGAGTCACCAAATA 59.021 47.619 0.00 0.00 46.69 1.40
237 244 3.216147 CCGTTTGGTCATCAATCCAAC 57.784 47.619 0.00 0.00 42.40 3.77
263 271 5.897377 AAAAATCCGGACCAAATAGTCTG 57.103 39.130 6.12 0.00 41.92 3.51
298 306 1.003355 CTCCAACGAGGCACACCAT 60.003 57.895 0.00 0.00 39.06 3.55
308 316 1.348696 GGGTTAGGGAAACTCCAACGA 59.651 52.381 0.00 0.00 38.64 3.85
322 330 0.317160 TAGATGGCATCGCGGGTTAG 59.683 55.000 21.01 0.00 0.00 2.34
328 336 2.610433 ACATACATAGATGGCATCGCG 58.390 47.619 21.01 15.35 0.00 5.87
329 337 4.442403 CGATACATACATAGATGGCATCGC 59.558 45.833 21.01 0.00 38.20 4.58
359 367 1.600636 CACTTGGGCTCCGCTTTCA 60.601 57.895 0.00 0.00 0.00 2.69
443 452 3.259751 GTCGGTATGGGCGCGAAC 61.260 66.667 12.10 0.74 0.00 3.95
455 464 4.719369 GTCGCTTGCCTCGTCGGT 62.719 66.667 0.00 0.00 34.25 4.69
457 466 2.642249 TATCGTCGCTTGCCTCGTCG 62.642 60.000 0.00 0.00 39.15 5.12
475 484 5.647658 CAGCACAACTTATCCAACATCCTTA 59.352 40.000 0.00 0.00 0.00 2.69
483 492 2.031245 CGCAACAGCACAACTTATCCAA 60.031 45.455 0.00 0.00 0.00 3.53
498 507 2.622011 GGCAACCGATTCCGCAACA 61.622 57.895 0.00 0.00 0.00 3.33
533 542 3.119424 TGTGTTTTTCTTTCCCGGTCAAC 60.119 43.478 0.00 0.00 0.00 3.18
537 546 2.826725 TGTTGTGTTTTTCTTTCCCGGT 59.173 40.909 0.00 0.00 0.00 5.28
540 549 4.390603 GGTGTTGTTGTGTTTTTCTTTCCC 59.609 41.667 0.00 0.00 0.00 3.97
546 555 3.612423 GCAGAGGTGTTGTTGTGTTTTTC 59.388 43.478 0.00 0.00 0.00 2.29
573 583 0.188096 CATCACCCATTATGGCCCCA 59.812 55.000 5.57 0.00 35.79 4.96
582 593 2.481441 TCAGGACTAGCATCACCCATT 58.519 47.619 0.00 0.00 0.00 3.16
583 594 2.180946 TCAGGACTAGCATCACCCAT 57.819 50.000 0.00 0.00 0.00 4.00
589 614 5.669477 AGTCAGAAAATCAGGACTAGCATC 58.331 41.667 0.00 0.00 38.74 3.91
596 621 5.802956 CGAGAACTAGTCAGAAAATCAGGAC 59.197 44.000 0.00 0.00 0.00 3.85
600 625 4.495422 GGCGAGAACTAGTCAGAAAATCA 58.505 43.478 0.00 0.00 0.00 2.57
606 631 0.322277 ACGGGCGAGAACTAGTCAGA 60.322 55.000 0.00 0.00 0.00 3.27
608 633 1.310933 GGACGGGCGAGAACTAGTCA 61.311 60.000 0.00 0.00 0.00 3.41
617 642 2.169832 AATAATGATGGACGGGCGAG 57.830 50.000 0.00 0.00 0.00 5.03
639 684 8.792830 ACAAAGATTATGTTGCTGTGTATAGT 57.207 30.769 0.00 0.00 28.67 2.12
674 719 5.391523 GCGATTGCCAAACTATCTTGTGTTA 60.392 40.000 0.00 0.00 33.98 2.41
695 747 4.387256 CCAACTTCAAGTTTTGTTTTGCGA 59.613 37.500 0.00 0.00 36.03 5.10
704 756 5.660864 TCCTTTCCATCCAACTTCAAGTTTT 59.339 36.000 0.00 0.00 36.03 2.43
734 793 1.763545 GTACTCCCCTCCTCCATCAAC 59.236 57.143 0.00 0.00 0.00 3.18
741 800 1.152715 CCCTCGTACTCCCCTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
758 821 2.836154 TGGCTCAACCAGTCACCC 59.164 61.111 0.00 0.00 46.36 4.61
808 875 6.635522 CATCACGTGTGGTTTTGTTTATTTG 58.364 36.000 16.51 0.00 0.00 2.32
846 917 3.782889 ACTATTGCGATTTCCCTTTGC 57.217 42.857 0.00 0.00 0.00 3.68
847 918 6.260936 AGTGATACTATTGCGATTTCCCTTTG 59.739 38.462 0.00 0.00 0.00 2.77
859 1360 2.547211 CAGGCAGCAGTGATACTATTGC 59.453 50.000 0.00 7.80 36.56 3.56
860 1361 2.547211 GCAGGCAGCAGTGATACTATTG 59.453 50.000 0.00 0.00 44.79 1.90
861 1362 2.843701 GCAGGCAGCAGTGATACTATT 58.156 47.619 0.00 0.00 44.79 1.73
862 1363 2.540265 GCAGGCAGCAGTGATACTAT 57.460 50.000 0.00 0.00 44.79 2.12
864 1365 4.950479 GCAGGCAGCAGTGATACT 57.050 55.556 0.00 0.00 44.79 2.12
896 1420 2.037144 GGTATGGACGTATGGTGAGGT 58.963 52.381 0.00 0.00 0.00 3.85
899 1423 1.034356 CCGGTATGGACGTATGGTGA 58.966 55.000 0.00 0.00 42.00 4.02
900 1424 0.032952 CCCGGTATGGACGTATGGTG 59.967 60.000 0.00 0.00 42.00 4.17
901 1425 0.106066 TCCCGGTATGGACGTATGGT 60.106 55.000 0.00 0.00 42.00 3.55
902 1426 0.601558 CTCCCGGTATGGACGTATGG 59.398 60.000 0.00 0.00 42.00 2.74
906 1430 1.000739 TTCCTCCCGGTATGGACGT 59.999 57.895 0.00 0.00 42.00 4.34
908 1432 1.041437 CTCTTCCTCCCGGTATGGAC 58.959 60.000 0.00 0.00 42.00 4.02
912 1436 1.146152 CTCCTCTCTTCCTCCCGGTAT 59.854 57.143 0.00 0.00 0.00 2.73
929 1461 3.827898 CGGCGTGGTCTCCTCTCC 61.828 72.222 0.00 0.00 0.00 3.71
930 1462 4.500116 GCGGCGTGGTCTCCTCTC 62.500 72.222 9.37 0.00 0.00 3.20
936 1468 4.664677 GAGTGTGCGGCGTGGTCT 62.665 66.667 9.37 2.47 0.00 3.85
948 1497 3.974642 GGAGGGAGGTATTAATGGAGTGT 59.025 47.826 0.00 0.00 0.00 3.55
952 1501 4.451760 GGTAGGGAGGGAGGTATTAATGGA 60.452 50.000 0.00 0.00 0.00 3.41
995 1544 0.967887 TTTGGTGGTGTGTGGTGTGG 60.968 55.000 0.00 0.00 0.00 4.17
996 1545 0.891373 TTTTGGTGGTGTGTGGTGTG 59.109 50.000 0.00 0.00 0.00 3.82
997 1546 0.892063 GTTTTGGTGGTGTGTGGTGT 59.108 50.000 0.00 0.00 0.00 4.16
998 1547 0.174617 GGTTTTGGTGGTGTGTGGTG 59.825 55.000 0.00 0.00 0.00 4.17
999 1548 0.040499 AGGTTTTGGTGGTGTGTGGT 59.960 50.000 0.00 0.00 0.00 4.16
1064 1622 0.030908 GTCCGCCATCTTAGTCCTCG 59.969 60.000 0.00 0.00 0.00 4.63
1240 1807 3.612681 GATCGGCGGAATCGGGGA 61.613 66.667 7.21 0.00 36.79 4.81
1245 1835 1.182385 AGAGGGAGATCGGCGGAATC 61.182 60.000 7.21 3.40 0.00 2.52
1290 1880 6.041865 CCAATCTGGACAAGTGAGATCTATCT 59.958 42.308 0.00 0.00 40.96 1.98
1323 1917 3.090532 GGGCTGGGGAGGTGGTAG 61.091 72.222 0.00 0.00 0.00 3.18
1395 2077 2.700773 GGCAGGGTGACGAATTGGC 61.701 63.158 0.00 0.00 0.00 4.52
1428 2110 9.896645 TTGCAAAATCTCTAGTCAAATCTATCT 57.103 29.630 0.00 0.00 0.00 1.98
1470 2156 0.391263 GTGGACCGGACTGGATCAAC 60.391 60.000 9.46 1.14 42.00 3.18
1493 2179 4.202326 TGAATTAATCCTTCCTCCGGTAGC 60.202 45.833 0.00 0.00 0.00 3.58
1511 2197 1.033746 CGCAGGGGCATGACTGAATT 61.034 55.000 14.30 0.00 41.24 2.17
1526 2212 1.026718 AAAGGAAAGGGATCGCGCAG 61.027 55.000 8.75 0.00 0.00 5.18
1527 2213 0.608035 AAAAGGAAAGGGATCGCGCA 60.608 50.000 8.75 0.00 0.00 6.09
1528 2214 0.526211 AAAAAGGAAAGGGATCGCGC 59.474 50.000 0.00 0.00 0.00 6.86
1619 2305 7.550906 GTGCTAAATACAGAGAATGAAGTCCTT 59.449 37.037 0.00 0.00 0.00 3.36
1621 2307 6.019479 CGTGCTAAATACAGAGAATGAAGTCC 60.019 42.308 0.00 0.00 0.00 3.85
1624 2310 5.555256 CGCGTGCTAAATACAGAGAATGAAG 60.555 44.000 0.00 0.00 0.00 3.02
1625 2311 4.267690 CGCGTGCTAAATACAGAGAATGAA 59.732 41.667 0.00 0.00 0.00 2.57
1626 2312 3.796717 CGCGTGCTAAATACAGAGAATGA 59.203 43.478 0.00 0.00 0.00 2.57
1627 2313 3.602491 GCGCGTGCTAAATACAGAGAATG 60.602 47.826 15.02 0.00 38.39 2.67
1648 2334 5.418310 TCGCCAGCAATTATTAAACTAGC 57.582 39.130 0.00 0.00 0.00 3.42
1649 2335 7.429340 CAGTTTCGCCAGCAATTATTAAACTAG 59.571 37.037 0.00 0.00 34.97 2.57
1650 2336 7.247728 CAGTTTCGCCAGCAATTATTAAACTA 58.752 34.615 0.00 0.00 34.97 2.24
1651 2337 6.092748 CAGTTTCGCCAGCAATTATTAAACT 58.907 36.000 0.00 0.00 36.61 2.66
1652 2338 5.288472 CCAGTTTCGCCAGCAATTATTAAAC 59.712 40.000 0.00 0.00 0.00 2.01
1653 2339 5.406649 CCAGTTTCGCCAGCAATTATTAAA 58.593 37.500 0.00 0.00 0.00 1.52
1658 2344 0.525761 GCCAGTTTCGCCAGCAATTA 59.474 50.000 0.00 0.00 0.00 1.40
1659 2345 1.181098 AGCCAGTTTCGCCAGCAATT 61.181 50.000 0.00 0.00 0.00 2.32
1661 2347 2.203337 AGCCAGTTTCGCCAGCAA 60.203 55.556 0.00 0.00 0.00 3.91
1662 2348 2.979676 CAGCCAGTTTCGCCAGCA 60.980 61.111 0.00 0.00 0.00 4.41
1663 2349 2.970974 GACAGCCAGTTTCGCCAGC 61.971 63.158 0.00 0.00 0.00 4.85
1665 2351 1.153066 TTGACAGCCAGTTTCGCCA 60.153 52.632 0.00 0.00 0.00 5.69
1667 2353 0.663153 AAGTTGACAGCCAGTTTCGC 59.337 50.000 0.00 0.00 0.00 4.70
1668 2354 1.939934 TGAAGTTGACAGCCAGTTTCG 59.060 47.619 0.00 0.00 0.00 3.46
1725 2421 1.512926 GTGCGAATCACAACCAGAGT 58.487 50.000 0.00 0.00 44.98 3.24
1740 2436 1.600957 CTTGAGCATATTCCTGGTGCG 59.399 52.381 1.87 0.00 43.37 5.34
1784 2482 0.393537 CAAGCAGAAGGGGCTACTGG 60.394 60.000 0.00 0.00 41.66 4.00
1800 2502 2.076100 TGTAAGTCATGAAGCGCCAAG 58.924 47.619 2.29 0.00 0.00 3.61
1851 2553 0.675522 TAAAGCGCAGGCCTGGTAAC 60.676 55.000 33.46 16.05 41.24 2.50
1860 2562 0.108804 TCGAAGAGGTAAAGCGCAGG 60.109 55.000 11.47 0.00 0.00 4.85
1864 2601 1.997669 AGCTTCGAAGAGGTAAAGCG 58.002 50.000 28.95 0.00 46.69 4.68
1869 2606 2.891580 ACTGTGAAGCTTCGAAGAGGTA 59.108 45.455 28.95 8.78 38.43 3.08
1870 2607 1.689273 ACTGTGAAGCTTCGAAGAGGT 59.311 47.619 28.95 12.11 38.43 3.85
1874 2611 2.731976 GGTGTACTGTGAAGCTTCGAAG 59.268 50.000 21.02 21.02 0.00 3.79
1877 2614 1.270094 TGGGTGTACTGTGAAGCTTCG 60.270 52.381 21.11 9.89 0.00 3.79
1885 2622 1.404986 CCATACGGTGGGTGTACTGTG 60.405 57.143 0.00 0.00 44.79 3.66
1898 2635 5.179368 CAGTATCTAAACATTGGCCATACGG 59.821 44.000 6.09 0.00 0.00 4.02
1899 2636 5.334105 GCAGTATCTAAACATTGGCCATACG 60.334 44.000 6.09 0.00 0.00 3.06
1912 2649 4.030913 AGGTAGCTGTGGCAGTATCTAAA 58.969 43.478 0.00 0.00 41.70 1.85
1914 2651 3.314307 AGGTAGCTGTGGCAGTATCTA 57.686 47.619 0.00 0.00 41.70 1.98
1928 2665 6.183361 TGGGAGGACTGAAATAAATAGGTAGC 60.183 42.308 0.00 0.00 0.00 3.58
1938 2675 5.094387 AGAGTCTTTGGGAGGACTGAAATA 58.906 41.667 0.16 0.00 42.06 1.40
1948 2685 4.543590 TGCTAAGAAGAGTCTTTGGGAG 57.456 45.455 6.88 4.07 41.55 4.30
1972 2710 5.470047 ACAGTTTGGTTTGGTGTTTAACA 57.530 34.783 0.00 0.00 0.00 2.41
1976 2714 2.672760 GCGACAGTTTGGTTTGGTGTTT 60.673 45.455 0.00 0.00 0.00 2.83
1982 2722 2.218603 ACTAGGCGACAGTTTGGTTTG 58.781 47.619 0.00 0.00 0.00 2.93
1983 2723 2.632987 ACTAGGCGACAGTTTGGTTT 57.367 45.000 0.00 0.00 0.00 3.27
2010 2750 9.688091 ATAGAAACATCTCAAGTAGAGTACAGA 57.312 33.333 0.00 0.00 44.98 3.41
2018 2758 8.253810 TCAACCTGATAGAAACATCTCAAGTAG 58.746 37.037 0.00 0.00 0.00 2.57
2020 2760 7.009179 TCAACCTGATAGAAACATCTCAAGT 57.991 36.000 0.00 0.00 0.00 3.16
2021 2761 7.605691 ACTTCAACCTGATAGAAACATCTCAAG 59.394 37.037 0.00 0.00 0.00 3.02
2022 2762 7.453393 ACTTCAACCTGATAGAAACATCTCAA 58.547 34.615 0.00 0.00 0.00 3.02
2023 2763 7.009179 ACTTCAACCTGATAGAAACATCTCA 57.991 36.000 0.00 0.00 0.00 3.27
2024 2764 9.039870 CATACTTCAACCTGATAGAAACATCTC 57.960 37.037 0.00 0.00 0.00 2.75
2047 2791 6.572167 TCAGCATGACATGAACAAAACATA 57.428 33.333 19.76 0.00 42.56 2.29
2063 2807 2.831366 GCCAGCCGTCATCAGCATG 61.831 63.158 0.00 0.00 37.54 4.06
2065 2809 3.963687 CTGCCAGCCGTCATCAGCA 62.964 63.158 0.00 0.00 0.00 4.41
2066 2810 3.200593 CTGCCAGCCGTCATCAGC 61.201 66.667 0.00 0.00 0.00 4.26
2067 2811 0.674581 TTTCTGCCAGCCGTCATCAG 60.675 55.000 0.00 0.00 0.00 2.90
2068 2812 0.250684 TTTTCTGCCAGCCGTCATCA 60.251 50.000 0.00 0.00 0.00 3.07
2086 2830 6.699575 AGCAATTCAATATAAGCGAACCTT 57.300 33.333 0.00 0.00 37.57 3.50
2087 2831 6.699575 AAGCAATTCAATATAAGCGAACCT 57.300 33.333 0.00 0.00 0.00 3.50
2092 2836 6.572153 TTGCAAAGCAATTCAATATAAGCG 57.428 33.333 0.00 0.00 43.99 4.68
2107 2854 3.019564 ACACCTGGATAGATTGCAAAGC 58.980 45.455 1.71 0.00 0.00 3.51
2108 2855 4.096984 GGAACACCTGGATAGATTGCAAAG 59.903 45.833 1.71 0.00 0.00 2.77
2109 2856 4.016444 GGAACACCTGGATAGATTGCAAA 58.984 43.478 1.71 0.00 0.00 3.68
2110 2857 3.620488 GGAACACCTGGATAGATTGCAA 58.380 45.455 0.00 0.00 0.00 4.08
2111 2858 2.419990 CGGAACACCTGGATAGATTGCA 60.420 50.000 0.00 0.00 0.00 4.08
2112 2859 2.213499 CGGAACACCTGGATAGATTGC 58.787 52.381 0.00 0.00 0.00 3.56
2113 2860 2.213499 GCGGAACACCTGGATAGATTG 58.787 52.381 0.00 0.00 0.00 2.67
2114 2861 1.837439 TGCGGAACACCTGGATAGATT 59.163 47.619 0.00 0.00 0.00 2.40
2115 2862 1.496060 TGCGGAACACCTGGATAGAT 58.504 50.000 0.00 0.00 0.00 1.98
2116 2863 1.207089 CTTGCGGAACACCTGGATAGA 59.793 52.381 0.00 0.00 0.00 1.98
2119 2866 1.002134 CCTTGCGGAACACCTGGAT 60.002 57.895 0.00 0.00 0.00 3.41
2141 2888 1.039785 CCTGGAGAGCATCGTCCTGA 61.040 60.000 0.00 0.00 42.67 3.86
2241 2988 3.070576 GGTTGGTGCTGGGCATCC 61.071 66.667 0.17 2.95 39.18 3.51
2250 2997 1.695114 AAAAGGCTTGGGGTTGGTGC 61.695 55.000 0.00 0.00 0.00 5.01
2299 3049 9.862149 TGGAAGTATATCAGTCAAGAGTACATA 57.138 33.333 0.00 0.00 0.00 2.29
2300 3050 8.768501 TGGAAGTATATCAGTCAAGAGTACAT 57.231 34.615 0.00 0.00 0.00 2.29
2301 3051 8.633561 CATGGAAGTATATCAGTCAAGAGTACA 58.366 37.037 0.00 0.00 0.00 2.90
2302 3052 8.634444 ACATGGAAGTATATCAGTCAAGAGTAC 58.366 37.037 0.00 0.00 0.00 2.73
2374 3124 3.207354 CCAGGCTGGTCGACGTAT 58.793 61.111 25.74 0.00 31.35 3.06
2389 3139 4.017591 ACCCAATGGAGATCAACATAACCA 60.018 41.667 0.00 0.00 34.81 3.67
2398 3148 5.310331 TCAATAGCATACCCAATGGAGATCA 59.690 40.000 0.00 0.00 35.99 2.92
2420 3171 4.050037 AGGAATGAGGATGGAAGGAATCA 58.950 43.478 0.00 0.00 0.00 2.57
2421 3172 4.103785 TGAGGAATGAGGATGGAAGGAATC 59.896 45.833 0.00 0.00 0.00 2.52
2426 3177 3.568853 GCATTGAGGAATGAGGATGGAAG 59.431 47.826 0.00 0.00 41.49 3.46
2429 3180 2.940158 TGCATTGAGGAATGAGGATGG 58.060 47.619 0.00 0.00 41.49 3.51
2430 3181 5.067954 TGTATGCATTGAGGAATGAGGATG 58.932 41.667 3.54 0.00 41.49 3.51
2433 3184 4.275196 CACTGTATGCATTGAGGAATGAGG 59.725 45.833 3.54 0.00 41.49 3.86
2440 3191 3.752747 TGTGAACACTGTATGCATTGAGG 59.247 43.478 3.54 0.00 0.00 3.86
2447 3198 4.229096 CCAAATGTGTGAACACTGTATGC 58.771 43.478 14.28 0.00 46.55 3.14
2448 3199 4.022935 AGCCAAATGTGTGAACACTGTATG 60.023 41.667 14.28 8.20 46.55 2.39
2449 3200 4.022935 CAGCCAAATGTGTGAACACTGTAT 60.023 41.667 14.28 0.00 46.55 2.29
2452 3203 2.099592 ACAGCCAAATGTGTGAACACTG 59.900 45.455 14.28 4.99 46.55 3.66
2454 3205 2.869233 ACAGCCAAATGTGTGAACAC 57.131 45.000 6.63 6.63 46.59 3.32
2481 3232 3.488047 GCAGCACATAAGGCATAACACAG 60.488 47.826 0.00 0.00 0.00 3.66
2485 3236 1.002468 CCGCAGCACATAAGGCATAAC 60.002 52.381 0.00 0.00 0.00 1.89
2491 3242 0.659427 CACATCCGCAGCACATAAGG 59.341 55.000 0.00 0.00 0.00 2.69
2492 3243 0.028505 GCACATCCGCAGCACATAAG 59.971 55.000 0.00 0.00 0.00 1.73
2493 3244 0.392863 AGCACATCCGCAGCACATAA 60.393 50.000 0.00 0.00 0.00 1.90
2495 3246 2.045634 AGCACATCCGCAGCACAT 60.046 55.556 0.00 0.00 0.00 3.21
2497 3248 2.249557 CTTGAGCACATCCGCAGCAC 62.250 60.000 0.00 0.00 0.00 4.40
2498 3249 2.032376 TTGAGCACATCCGCAGCA 59.968 55.556 0.00 0.00 0.00 4.41
2500 3251 2.758089 GGCTTGAGCACATCCGCAG 61.758 63.158 5.24 0.00 44.36 5.18
2501 3252 1.898330 TAGGCTTGAGCACATCCGCA 61.898 55.000 5.24 0.00 44.36 5.69
2502 3253 1.153369 TAGGCTTGAGCACATCCGC 60.153 57.895 5.24 0.00 44.36 5.54
2503 3254 0.108186 TGTAGGCTTGAGCACATCCG 60.108 55.000 5.24 0.00 44.36 4.18
2504 3255 1.208052 TCTGTAGGCTTGAGCACATCC 59.792 52.381 5.24 0.00 44.36 3.51
2505 3256 2.680312 TCTGTAGGCTTGAGCACATC 57.320 50.000 5.24 0.00 44.36 3.06
2506 3257 3.276857 CAATCTGTAGGCTTGAGCACAT 58.723 45.455 5.24 0.00 44.36 3.21
2507 3258 2.703416 CAATCTGTAGGCTTGAGCACA 58.297 47.619 5.24 0.99 44.36 4.57
2508 3259 1.399791 GCAATCTGTAGGCTTGAGCAC 59.600 52.381 5.24 0.00 44.36 4.40
2509 3260 1.280133 AGCAATCTGTAGGCTTGAGCA 59.720 47.619 5.24 0.00 44.36 4.26
2510 3261 2.035530 AGCAATCTGTAGGCTTGAGC 57.964 50.000 0.00 0.00 41.14 4.26
2511 3262 3.870419 GAGAAGCAATCTGTAGGCTTGAG 59.130 47.826 2.49 0.00 47.00 3.02
2512 3263 3.261643 TGAGAAGCAATCTGTAGGCTTGA 59.738 43.478 2.49 0.00 47.00 3.02
2513 3264 3.373439 GTGAGAAGCAATCTGTAGGCTTG 59.627 47.826 2.49 0.00 47.00 4.01
2515 3266 2.568956 TGTGAGAAGCAATCTGTAGGCT 59.431 45.455 0.00 0.00 38.96 4.58
2516 3267 2.977914 TGTGAGAAGCAATCTGTAGGC 58.022 47.619 0.00 0.00 38.96 3.93
2517 3268 6.154203 TCTATGTGAGAAGCAATCTGTAGG 57.846 41.667 0.00 0.00 38.96 3.18
2518 3269 7.208777 ACATCTATGTGAGAAGCAATCTGTAG 58.791 38.462 0.00 0.00 40.03 2.74
2519 3270 7.117285 ACATCTATGTGAGAAGCAATCTGTA 57.883 36.000 0.00 0.00 40.03 2.74
2520 3271 5.987098 ACATCTATGTGAGAAGCAATCTGT 58.013 37.500 0.00 0.00 40.03 3.41
2521 3272 7.432059 TCTACATCTATGTGAGAAGCAATCTG 58.568 38.462 5.85 0.00 41.89 2.90
2522 3273 7.594351 TCTACATCTATGTGAGAAGCAATCT 57.406 36.000 5.85 0.00 41.89 2.40
2523 3274 8.830201 ATTCTACATCTATGTGAGAAGCAATC 57.170 34.615 5.85 0.00 41.89 2.67
2524 3275 7.877097 GGATTCTACATCTATGTGAGAAGCAAT 59.123 37.037 19.84 8.72 41.89 3.56
2535 3286 6.294473 AGTGGCAAAGGATTCTACATCTATG 58.706 40.000 0.00 0.00 0.00 2.23
2536 3287 6.465035 GGAGTGGCAAAGGATTCTACATCTAT 60.465 42.308 0.00 0.00 0.00 1.98
2560 3311 1.777941 ACTACTTCTAGGAAGGCCGG 58.222 55.000 0.00 0.00 39.96 6.13
2719 3475 7.287466 ACATGCCCTGCAGTCATAAATAATTTA 59.713 33.333 13.81 0.00 43.65 1.40
2720 3476 6.098695 ACATGCCCTGCAGTCATAAATAATTT 59.901 34.615 13.81 0.00 43.65 1.82
2721 3477 5.599656 ACATGCCCTGCAGTCATAAATAATT 59.400 36.000 13.81 0.00 43.65 1.40
2722 3478 5.142639 ACATGCCCTGCAGTCATAAATAAT 58.857 37.500 13.81 0.00 43.65 1.28
2723 3479 4.535781 ACATGCCCTGCAGTCATAAATAA 58.464 39.130 13.81 0.00 43.65 1.40
2771 3532 4.574013 CACTTCTTCTGTTGCTCTTCAGTT 59.426 41.667 0.00 0.00 33.89 3.16
2828 3589 3.969287 AGTTCAGTCTGAGCATAGCAA 57.031 42.857 17.76 0.00 29.40 3.91
2873 3634 1.242076 ATGTGGCAGTTGTCTCAAGC 58.758 50.000 0.00 0.00 0.00 4.01
2987 3756 8.303876 GGAAACATAATTAAGGAAGCAAAGTCA 58.696 33.333 0.00 0.00 0.00 3.41
3003 3772 1.006639 AGGTTGCCGGGGAAACATAAT 59.993 47.619 18.98 0.00 35.40 1.28
3008 3777 1.110518 TTTCAGGTTGCCGGGGAAAC 61.111 55.000 8.45 8.45 32.98 2.78
3016 3785 3.306294 CCCTTGAGAAATTTCAGGTTGCC 60.306 47.826 19.99 1.55 0.00 4.52
3021 3790 2.757314 GAGGCCCTTGAGAAATTTCAGG 59.243 50.000 19.99 16.46 0.00 3.86
3023 3792 2.379907 AGGAGGCCCTTGAGAAATTTCA 59.620 45.455 19.99 0.00 40.78 2.69
3056 3825 4.161001 GCACATTTGAGAGGGGAAATCAAT 59.839 41.667 0.00 0.00 33.26 2.57
3057 3826 3.511146 GCACATTTGAGAGGGGAAATCAA 59.489 43.478 0.00 0.00 0.00 2.57
3072 3841 1.152483 AGGCCACCACTGCACATTT 60.152 52.632 5.01 0.00 0.00 2.32
3096 3865 0.387565 GCGTGGAAGCTTTTCCCAAA 59.612 50.000 6.92 0.00 40.39 3.28
3114 3883 0.302890 GAGCATACACGACTGCATGC 59.697 55.000 11.82 11.82 43.24 4.06
3123 3892 2.714480 CGTTATGAGACGAGCATACACG 59.286 50.000 0.00 0.00 45.47 4.49
3194 3963 4.906065 AAGGAAAACCCACTTAAACGAC 57.094 40.909 0.00 0.00 37.41 4.34
3195 3964 4.440387 GCAAAGGAAAACCCACTTAAACGA 60.440 41.667 0.00 0.00 37.41 3.85
3196 3965 3.799963 GCAAAGGAAAACCCACTTAAACG 59.200 43.478 0.00 0.00 37.41 3.60
3197 3966 3.799963 CGCAAAGGAAAACCCACTTAAAC 59.200 43.478 0.00 0.00 37.41 2.01
3198 3967 3.700038 TCGCAAAGGAAAACCCACTTAAA 59.300 39.130 0.00 0.00 37.41 1.52
3201 3970 1.770294 TCGCAAAGGAAAACCCACTT 58.230 45.000 0.00 0.00 37.41 3.16
3203 3972 1.407618 AGTTCGCAAAGGAAAACCCAC 59.592 47.619 0.00 0.00 37.41 4.61
3204 3973 1.407258 CAGTTCGCAAAGGAAAACCCA 59.593 47.619 0.00 0.00 37.41 4.51
3207 3978 4.916870 AGTTACAGTTCGCAAAGGAAAAC 58.083 39.130 0.00 0.00 0.00 2.43
3232 4003 7.442364 CGATGAAACCTGAAATATGGATGTACT 59.558 37.037 0.00 0.00 0.00 2.73
3234 4005 7.226523 CACGATGAAACCTGAAATATGGATGTA 59.773 37.037 0.00 0.00 0.00 2.29
3293 4064 1.003718 ACCAAGAGTAACGCCAGGC 60.004 57.895 0.00 0.00 0.00 4.85
3299 4070 3.245284 CGCCAATATCACCAAGAGTAACG 59.755 47.826 0.00 0.00 0.00 3.18
3308 4079 2.799126 ACTTTCCGCCAATATCACCA 57.201 45.000 0.00 0.00 0.00 4.17
3320 4091 1.659794 CCCACTGCCAAACTTTCCG 59.340 57.895 0.00 0.00 0.00 4.30
3341 4112 7.998383 AGAACACCATTATCCATGCTGTTATAA 59.002 33.333 0.00 0.00 40.42 0.98
3697 4479 1.977293 GAGTCTCAGGGCCACCATCC 61.977 65.000 6.18 0.00 40.13 3.51
3737 4519 9.593134 AGATTACTACTTGAGAATGACAATCAC 57.407 33.333 0.00 0.00 0.00 3.06
3970 4752 1.143305 CTTCCAGCTTCTGTGTGACG 58.857 55.000 0.00 0.00 0.00 4.35
3991 4773 4.074970 CTGGCAGTGTTGAGTAATCCTTT 58.925 43.478 6.28 0.00 0.00 3.11
4084 4866 9.533253 AATATAATTGTTAAGGCATTGCTGAAC 57.467 29.630 8.82 10.46 0.00 3.18
4109 4902 6.687081 AATCAGTACAAACGAGGAAACAAA 57.313 33.333 0.00 0.00 0.00 2.83
4116 4909 3.249799 TGCACAAATCAGTACAAACGAGG 59.750 43.478 0.00 0.00 0.00 4.63
4119 4912 5.107913 CCATTTGCACAAATCAGTACAAACG 60.108 40.000 5.64 0.00 37.52 3.60
4124 4917 4.923281 GGTTCCATTTGCACAAATCAGTAC 59.077 41.667 5.64 5.18 38.84 2.73
4157 4958 8.991783 ACATGGATGATAAAGATGAACTGATT 57.008 30.769 0.00 0.00 0.00 2.57
4176 4977 3.068024 GCTCAGTTTTTGGTTGACATGGA 59.932 43.478 0.00 0.00 0.00 3.41
4177 4978 3.068590 AGCTCAGTTTTTGGTTGACATGG 59.931 43.478 0.00 0.00 0.00 3.66
4235 5049 5.635278 TCCAATGGAGCTTCATCAAGATA 57.365 39.130 8.28 0.00 0.00 1.98
4237 5051 4.012374 GTTCCAATGGAGCTTCATCAAGA 58.988 43.478 8.28 2.68 31.21 3.02
4324 5153 8.426569 AATGCATCCATTATATAAACTGGCTT 57.573 30.769 0.00 2.70 39.81 4.35
4390 5219 1.570813 TCAATCGCGTCCTGCATAAG 58.429 50.000 5.77 0.00 46.97 1.73
4401 5231 1.351430 TTCGGCACTCTTCAATCGCG 61.351 55.000 0.00 0.00 0.00 5.87
4431 5261 2.346803 CTGTTCAGGTAACCATGTCCG 58.653 52.381 0.00 0.00 37.27 4.79
4533 5363 1.295792 TCAGGTGCAAAACGACACTC 58.704 50.000 0.00 0.00 36.99 3.51
4580 5410 5.024118 ACTACTACTGGCCAATACTGAACT 58.976 41.667 7.01 0.00 0.00 3.01
4672 5504 1.071471 CGACAGGTTGCTTCCCAGT 59.929 57.895 0.00 0.00 0.00 4.00
4719 5551 2.803956 GCTTTTGCATTGCATCAAGTGT 59.196 40.909 22.54 0.00 46.58 3.55
4820 5654 5.220777 CGAAAAGTAGCTCCAGACAAAAACA 60.221 40.000 0.00 0.00 0.00 2.83
4837 5671 2.480419 CTCAATCGCTTCACCGAAAAGT 59.520 45.455 0.00 0.00 41.01 2.66
4843 5677 0.095935 CAAGCTCAATCGCTTCACCG 59.904 55.000 0.00 0.00 46.68 4.94
4858 5692 1.993370 GTACCACGATCAGTCACAAGC 59.007 52.381 0.00 0.00 0.00 4.01
4866 5700 8.082242 TGATACATGAATAAGTACCACGATCAG 58.918 37.037 0.00 0.00 0.00 2.90
4880 5714 9.498176 CTGTGGAGAATCATTGATACATGAATA 57.502 33.333 0.00 0.00 36.25 1.75
4903 5737 0.761187 TTGAGCCAGTCTTCAGCTGT 59.239 50.000 14.67 0.00 36.87 4.40
5010 5844 2.024414 GTGCAACACCAACCTTCTTCT 58.976 47.619 0.00 0.00 36.32 2.85
5044 5881 5.740406 CAGCAACCATGTTTTGATGTTTTC 58.260 37.500 12.24 0.00 35.97 2.29
5045 5882 5.738118 CAGCAACCATGTTTTGATGTTTT 57.262 34.783 12.24 0.00 35.97 2.43
5081 5918 3.580895 TGACTGCACCTAGTAATTCACCA 59.419 43.478 0.00 0.00 0.00 4.17
5093 5930 0.035881 CCATGTCACTGACTGCACCT 59.964 55.000 10.54 0.00 33.15 4.00
5160 5999 3.243816 TGAGCCACAGCAGCCTCA 61.244 61.111 0.00 0.00 43.56 3.86
5169 6008 3.233980 AGCTGGACGTGAGCCACA 61.234 61.111 11.63 0.00 37.12 4.17
5193 6032 2.364632 CCAACAACTCACTTGGTCACA 58.635 47.619 0.00 0.00 33.46 3.58
5208 6047 2.000825 TACAGCAACCCCAGCCAACA 62.001 55.000 0.00 0.00 0.00 3.33
5211 6050 1.142870 GATATACAGCAACCCCAGCCA 59.857 52.381 0.00 0.00 0.00 4.75
5214 6053 3.795688 ATGGATATACAGCAACCCCAG 57.204 47.619 0.00 0.00 0.00 4.45
5215 6054 4.534647 AAATGGATATACAGCAACCCCA 57.465 40.909 0.00 0.00 0.00 4.96
5216 6055 4.280929 GGAAAATGGATATACAGCAACCCC 59.719 45.833 0.00 0.00 0.00 4.95
5217 6056 4.023193 CGGAAAATGGATATACAGCAACCC 60.023 45.833 0.00 0.00 0.00 4.11
5218 6057 4.023193 CCGGAAAATGGATATACAGCAACC 60.023 45.833 0.00 0.00 0.00 3.77
5220 6059 4.141287 CCCGGAAAATGGATATACAGCAA 58.859 43.478 0.73 0.00 0.00 3.91
5244 6093 6.493166 AGGAATGAACTGAATGATTGGGTTA 58.507 36.000 0.00 0.00 0.00 2.85
5259 6108 2.570135 GGAGGCATCAGAGGAATGAAC 58.430 52.381 0.00 0.00 31.76 3.18
5267 6116 0.982704 CATAGGGGGAGGCATCAGAG 59.017 60.000 0.00 0.00 0.00 3.35
5271 6120 0.398318 GACACATAGGGGGAGGCATC 59.602 60.000 0.00 0.00 0.00 3.91
5355 6204 2.520039 CGCGTAGATGCTGCACAGG 61.520 63.158 3.57 0.14 0.00 4.00
5385 6234 4.641645 TCGCCCAGGTGCTTGTGG 62.642 66.667 0.00 0.00 0.00 4.17
5463 6312 0.734942 TTACCTGCGCGTACAGCTTC 60.735 55.000 8.43 0.00 45.59 3.86
5502 6354 4.218635 ACTGTGTCTGTCTGTCATACGATT 59.781 41.667 0.00 0.00 0.00 3.34
5504 6356 3.146847 ACTGTGTCTGTCTGTCATACGA 58.853 45.455 0.00 0.00 0.00 3.43
5508 6360 2.030717 GTCGACTGTGTCTGTCTGTCAT 60.031 50.000 8.70 0.00 34.83 3.06
5510 6362 1.660614 CGTCGACTGTGTCTGTCTGTC 60.661 57.143 14.70 0.00 31.62 3.51
5511 6363 0.308068 CGTCGACTGTGTCTGTCTGT 59.692 55.000 14.70 0.00 31.62 3.41
5512 6364 0.586802 TCGTCGACTGTGTCTGTCTG 59.413 55.000 14.70 0.00 31.62 3.51
5513 6365 1.264557 CTTCGTCGACTGTGTCTGTCT 59.735 52.381 14.70 0.00 31.62 3.41
5514 6366 1.676057 CTTCGTCGACTGTGTCTGTC 58.324 55.000 14.70 0.00 0.00 3.51
5515 6367 0.317938 GCTTCGTCGACTGTGTCTGT 60.318 55.000 14.70 0.00 0.00 3.41
5517 6369 0.669077 AAGCTTCGTCGACTGTGTCT 59.331 50.000 14.70 1.38 0.00 3.41
5519 6371 1.593006 CAAAAGCTTCGTCGACTGTGT 59.407 47.619 14.70 0.00 0.00 3.72
5520 6372 1.657538 GCAAAAGCTTCGTCGACTGTG 60.658 52.381 14.70 0.00 0.00 3.66
5523 6422 0.249911 AGGCAAAAGCTTCGTCGACT 60.250 50.000 14.70 0.00 0.00 4.18
5536 6435 2.627699 GTTCAGTCCATGGAAAGGCAAA 59.372 45.455 18.20 2.66 0.00 3.68
5539 6438 1.815003 CAGTTCAGTCCATGGAAAGGC 59.185 52.381 18.20 3.64 0.00 4.35
5540 6439 3.423539 TCAGTTCAGTCCATGGAAAGG 57.576 47.619 18.20 9.14 0.00 3.11
5541 6440 4.214971 CAGTTCAGTTCAGTCCATGGAAAG 59.785 45.833 18.20 12.27 0.00 2.62
5542 6441 4.136796 CAGTTCAGTTCAGTCCATGGAAA 58.863 43.478 18.20 4.36 0.00 3.13
5543 6442 3.496692 CCAGTTCAGTTCAGTCCATGGAA 60.497 47.826 18.20 0.00 0.00 3.53
5544 6443 2.038952 CCAGTTCAGTTCAGTCCATGGA 59.961 50.000 11.44 11.44 0.00 3.41
5565 6464 2.562912 CCGCACCTGCACAACATC 59.437 61.111 0.00 0.00 42.21 3.06
5612 6511 0.449388 GGTAGTGGTCCGTGTAGTCG 59.551 60.000 0.00 0.00 0.00 4.18
5867 6803 1.669115 CTGTGTGTCCCTCTTGCCG 60.669 63.158 0.00 0.00 0.00 5.69
5868 6804 0.603975 GTCTGTGTGTCCCTCTTGCC 60.604 60.000 0.00 0.00 0.00 4.52
5881 6817 1.290203 AACAACAGCGTCTGTCTGTG 58.710 50.000 18.29 13.68 44.62 3.66
5894 6830 9.715121 ACGATCCTTTTATTTCTACTAACAACA 57.285 29.630 0.00 0.00 0.00 3.33
5903 6839 5.130477 AGGGAGCACGATCCTTTTATTTCTA 59.870 40.000 0.70 0.00 39.50 2.10
5915 6851 2.818132 CCAGGAGGGAGCACGATC 59.182 66.667 0.00 0.00 40.01 3.69
5984 6954 9.372369 GATAAGTATCTCAATAATACTGGCACC 57.628 37.037 0.00 0.00 39.34 5.01
6079 7059 9.679661 AACAAGGAAATTTAAGACAAACCATTT 57.320 25.926 0.00 0.00 0.00 2.32
6151 7131 3.557264 GCACAGGTCCTTTTGCTAGTACT 60.557 47.826 13.19 0.00 32.00 2.73
6152 7132 2.742589 GCACAGGTCCTTTTGCTAGTAC 59.257 50.000 13.19 0.00 32.00 2.73
6153 7133 2.611971 CGCACAGGTCCTTTTGCTAGTA 60.612 50.000 16.85 0.00 32.56 1.82
6175 7166 0.178975 TGTTTTTCCTCCCGGTGCAT 60.179 50.000 0.00 0.00 0.00 3.96
6203 7195 7.043565 AGAAAATATGGTCATTGCCATTGAAC 58.956 34.615 14.90 0.00 46.33 3.18
6304 7296 7.789273 TTTGAACATTGCTTCAATTTGTGAT 57.211 28.000 12.18 0.00 39.37 3.06
6436 7435 6.744112 TGAATTTTGAAGAATTAACTGCCGT 58.256 32.000 0.00 0.00 29.75 5.68
6509 7508 9.563748 AAAAATGTTCATGAATGATCAAAGGTT 57.436 25.926 12.12 0.00 39.23 3.50
6617 7622 4.497473 TCGCCGATTCAAAAGAAAATGT 57.503 36.364 0.00 0.00 0.00 2.71
6713 7724 7.929785 ACAAATTGCTGATTCAGAAAATGTTCT 59.070 29.630 17.87 0.00 45.36 3.01
6736 7747 8.324567 GCAAAAGTGTTTATCGATTCAAAACAA 58.675 29.630 20.84 7.87 42.79 2.83
6737 7748 7.489435 TGCAAAAGTGTTTATCGATTCAAAACA 59.511 29.630 17.07 17.07 39.95 2.83
6738 7749 7.836512 TGCAAAAGTGTTTATCGATTCAAAAC 58.163 30.769 1.71 9.24 34.45 2.43
6741 7756 8.486383 CAATTGCAAAAGTGTTTATCGATTCAA 58.514 29.630 1.71 0.00 0.00 2.69
6748 7763 5.918011 TCCGTCAATTGCAAAAGTGTTTATC 59.082 36.000 1.71 0.00 0.00 1.75
6755 7770 5.705609 AATAGTCCGTCAATTGCAAAAGT 57.294 34.783 1.71 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.