Multiple sequence alignment - TraesCS6D01G406900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G406900 chr6D 100.000 7690 0 0 1 7690 472968729 472961040 0.000000e+00 14201.0
1 TraesCS6D01G406900 chr6D 98.025 1215 18 1 2125 3339 472963252 472962044 0.000000e+00 2106.0
2 TraesCS6D01G406900 chr6D 98.025 1215 18 1 5478 6686 472966605 472965391 0.000000e+00 2106.0
3 TraesCS6D01G406900 chr6D 87.605 1791 193 14 1756 3528 472945209 472943430 0.000000e+00 2050.0
4 TraesCS6D01G406900 chr6D 90.483 1345 124 3 5411 6752 472941290 472939947 0.000000e+00 1772.0
5 TraesCS6D01G406900 chr6D 91.077 1188 106 0 2147 3334 472941207 472940020 0.000000e+00 1607.0
6 TraesCS6D01G406900 chr6D 90.360 1193 115 0 5494 6686 472944815 472943623 0.000000e+00 1567.0
7 TraesCS6D01G406900 chr6D 85.563 568 61 19 4667 5223 472942225 472941668 6.690000e-160 575.0
8 TraesCS6D01G406900 chr6D 82.085 681 67 17 207 878 472946775 472946141 1.470000e-146 531.0
9 TraesCS6D01G406900 chr6D 91.935 310 22 3 4025 4331 472942688 472942379 1.530000e-116 431.0
10 TraesCS6D01G406900 chr6D 85.203 419 46 9 893 1301 472946085 472945673 4.290000e-112 416.0
11 TraesCS6D01G406900 chr6D 87.361 269 21 6 3697 3960 472943072 472942812 5.830000e-76 296.0
12 TraesCS6D01G406900 chr6D 85.990 207 25 2 1 207 299051809 299052011 1.300000e-52 219.0
13 TraesCS6D01G406900 chr6D 82.288 271 28 11 1635 1899 472945373 472945117 4.670000e-52 217.0
14 TraesCS6D01G406900 chr6D 100.000 31 0 0 948 978 472981088 472981058 3.000000e-04 58.4
15 TraesCS6D01G406900 chr6A 92.857 2674 123 22 699 3339 616860374 616863012 0.000000e+00 3818.0
16 TraesCS6D01G406900 chr6A 90.004 2231 163 31 5478 7684 616861798 616863992 0.000000e+00 2830.0
17 TraesCS6D01G406900 chr6A 90.835 1233 107 2 2091 3323 616880273 616881499 0.000000e+00 1646.0
18 TraesCS6D01G406900 chr6A 90.254 1262 119 3 5494 6752 616880323 616881583 0.000000e+00 1646.0
19 TraesCS6D01G406900 chr6A 82.776 598 58 28 715 1284 616878768 616879348 6.930000e-135 492.0
20 TraesCS6D01G406900 chr6A 90.909 319 22 3 214 529 616859618 616859932 9.230000e-114 422.0
21 TraesCS6D01G406900 chr6A 85.498 331 25 12 379 705 616875879 616876190 2.680000e-84 324.0
22 TraesCS6D01G406900 chr6A 79.675 123 14 6 1639 1760 616879602 616879714 2.300000e-10 78.7
23 TraesCS6D01G406900 chr6A 97.368 38 1 0 555 592 616857778 616857815 1.790000e-06 65.8
24 TraesCS6D01G406900 chr6B 94.467 1934 99 4 1807 3739 718334646 718332720 0.000000e+00 2972.0
25 TraesCS6D01G406900 chr6B 93.316 1496 78 11 5411 6901 718328732 718327254 0.000000e+00 2189.0
26 TraesCS6D01G406900 chr6B 87.839 1883 193 17 1759 3629 718317756 718315898 0.000000e+00 2176.0
27 TraesCS6D01G406900 chr6B 95.474 1193 54 0 2147 3339 718328648 718327456 0.000000e+00 1905.0
28 TraesCS6D01G406900 chr6B 95.214 1191 57 0 5496 6686 718334303 718333113 0.000000e+00 1884.0
29 TraesCS6D01G406900 chr6B 90.097 1343 129 3 5413 6752 718313557 718312216 0.000000e+00 1740.0
30 TraesCS6D01G406900 chr6B 90.696 1193 111 0 2147 3339 718313476 718312284 0.000000e+00 1589.0
31 TraesCS6D01G406900 chr6B 89.901 1218 111 6 5478 6686 718317388 718316174 0.000000e+00 1557.0
32 TraesCS6D01G406900 chr6B 88.967 1287 88 18 20 1302 718336213 718334977 0.000000e+00 1541.0
33 TraesCS6D01G406900 chr6B 87.679 698 59 14 7003 7684 718327260 718326574 0.000000e+00 787.0
34 TraesCS6D01G406900 chr6B 85.380 684 76 16 4652 5321 718314507 718313834 0.000000e+00 688.0
35 TraesCS6D01G406900 chr6B 83.451 707 94 19 4710 5404 718329465 718328770 3.030000e-178 636.0
36 TraesCS6D01G406900 chr6B 83.696 368 38 8 207 562 718319570 718319213 2.070000e-85 327.0
37 TraesCS6D01G406900 chr6B 84.768 302 35 8 893 1187 718318694 718318397 7.550000e-75 292.0
38 TraesCS6D01G406900 chr6B 85.263 285 22 12 607 879 718319020 718318744 7.600000e-70 276.0
39 TraesCS6D01G406900 chr6B 84.211 209 21 6 1641 1848 718334751 718334554 7.880000e-45 193.0
40 TraesCS6D01G406900 chr6B 78.846 260 40 11 1356 1611 618665938 618665690 2.220000e-35 161.0
41 TraesCS6D01G406900 chr6B 85.526 152 17 4 4514 4660 221286818 221286667 3.720000e-33 154.0
42 TraesCS6D01G406900 chr6B 86.066 122 14 2 4332 4451 718314619 718314499 2.250000e-25 128.0
43 TraesCS6D01G406900 chr6B 79.412 170 32 1 1732 1898 718317939 718317770 4.880000e-22 117.0
44 TraesCS6D01G406900 chr6B 85.185 108 15 1 1505 1611 693935004 693935111 8.160000e-20 110.0
45 TraesCS6D01G406900 chr6B 80.420 143 28 0 1757 1899 718317809 718317667 8.160000e-20 110.0
46 TraesCS6D01G406900 chr6B 82.400 125 12 7 4332 4449 718329740 718329619 4.910000e-17 100.0
47 TraesCS6D01G406900 chr6B 97.872 47 0 1 607 652 718319083 718319037 6.400000e-11 80.5
48 TraesCS6D01G406900 chr6B 94.872 39 2 0 4477 4515 200906987 200906949 2.320000e-05 62.1
49 TraesCS6D01G406900 chr5D 89.777 1301 78 20 3 1302 546336803 546338049 0.000000e+00 1615.0
50 TraesCS6D01G406900 chr5D 84.836 244 29 6 7237 7475 9104393 9104633 9.970000e-59 239.0
51 TraesCS6D01G406900 chr5D 85.106 141 18 3 4503 4642 350730672 350730534 2.890000e-29 141.0
52 TraesCS6D01G406900 chr5D 80.000 190 31 5 1288 1472 13171341 13171154 4.840000e-27 134.0
53 TraesCS6D01G406900 chr5D 81.633 147 20 5 224 369 118056383 118056243 1.750000e-21 115.0
54 TraesCS6D01G406900 chr5D 78.286 175 34 4 7512 7685 531503141 531502970 8.160000e-20 110.0
55 TraesCS6D01G406900 chr5D 88.333 60 6 1 4454 4513 402659500 402659558 3.850000e-08 71.3
56 TraesCS6D01G406900 chr5D 85.484 62 8 1 4454 4515 389462279 389462339 6.440000e-06 63.9
57 TraesCS6D01G406900 chr4B 85.990 207 27 1 1 207 650731639 650731843 3.610000e-53 220.0
58 TraesCS6D01G406900 chr4D 78.284 373 57 14 7256 7608 91230174 91230542 1.300000e-52 219.0
59 TraesCS6D01G406900 chr4D 76.291 426 67 16 7282 7685 506005237 506005650 6.090000e-46 196.0
60 TraesCS6D01G406900 chr4D 84.694 196 22 3 12 206 504190025 504190213 1.020000e-43 189.0
61 TraesCS6D01G406900 chr4D 88.489 139 14 2 57 195 503170483 503170347 4.770000e-37 167.0
62 TraesCS6D01G406900 chr4D 90.909 121 11 0 4516 4636 500817504 500817384 6.170000e-36 163.0
63 TraesCS6D01G406900 chr4D 86.184 152 16 4 4514 4660 411051888 411051737 7.990000e-35 159.0
64 TraesCS6D01G406900 chr4D 78.210 257 39 11 1321 1561 1651453 1651198 1.730000e-31 148.0
65 TraesCS6D01G406900 chr4D 78.723 188 33 6 1273 1455 1397079 1396894 1.360000e-22 119.0
66 TraesCS6D01G406900 chr4D 100.000 28 0 0 6748 6775 185317419 185317446 1.400000e-02 52.8
67 TraesCS6D01G406900 chr4A 77.670 412 57 19 7291 7671 487545272 487545679 1.300000e-52 219.0
68 TraesCS6D01G406900 chr4A 82.540 126 21 1 245 369 605377457 605377332 8.160000e-20 110.0
69 TraesCS6D01G406900 chr4A 83.200 125 14 3 1517 1634 596087030 596086906 2.930000e-19 108.0
70 TraesCS6D01G406900 chr5A 84.305 223 32 3 7236 7457 293439935 293440155 1.680000e-51 215.0
71 TraesCS6D01G406900 chr5A 82.553 235 37 3 1669 1900 664260921 664261154 3.640000e-48 204.0
72 TraesCS6D01G406900 chr5A 85.567 194 27 1 3 196 687643273 687643081 1.310000e-47 202.0
73 TraesCS6D01G406900 chr2B 82.979 235 39 1 7239 7473 542692649 542692416 2.170000e-50 211.0
74 TraesCS6D01G406900 chr2B 79.897 194 32 5 1382 1571 16935343 16935533 1.350000e-27 135.0
75 TraesCS6D01G406900 chr2B 78.788 198 31 7 1382 1571 16910509 16910703 1.050000e-23 122.0
76 TraesCS6D01G406900 chr2B 80.420 143 26 2 5328 5468 162628029 162628171 2.930000e-19 108.0
77 TraesCS6D01G406900 chr7D 82.083 240 39 4 7236 7474 553072215 553072451 1.310000e-47 202.0
78 TraesCS6D01G406900 chr7D 83.439 157 19 6 219 374 152134103 152133953 1.040000e-28 139.0
79 TraesCS6D01G406900 chr7D 82.308 130 21 2 5340 5468 33102842 33102714 2.270000e-20 111.0
80 TraesCS6D01G406900 chr2D 81.818 220 36 2 7256 7475 11618570 11618355 1.700000e-41 182.0
81 TraesCS6D01G406900 chr2D 84.663 163 19 6 4514 4671 261141389 261141550 2.870000e-34 158.0
82 TraesCS6D01G406900 chr2D 86.154 65 7 2 4452 4515 648455415 648455478 1.380000e-07 69.4
83 TraesCS6D01G406900 chr2D 90.909 44 2 2 4471 4513 101307318 101307360 3.000000e-04 58.4
84 TraesCS6D01G406900 chr2A 82.524 206 34 1 1 206 78767694 78767491 6.130000e-41 180.0
85 TraesCS6D01G406900 chr2A 82.581 155 24 3 5327 5479 141506471 141506318 4.840000e-27 134.0
86 TraesCS6D01G406900 chr3B 83.598 189 28 2 3 188 78740873 78740685 2.850000e-39 174.0
87 TraesCS6D01G406900 chr3B 88.095 126 12 2 1350 1472 29326952 29327077 6.220000e-31 147.0
88 TraesCS6D01G406900 chr3B 79.114 158 30 3 5325 5479 563400188 563400031 1.060000e-18 106.0
89 TraesCS6D01G406900 chr3B 77.249 189 36 7 7499 7685 776862527 776862710 3.800000e-18 104.0
90 TraesCS6D01G406900 chr3B 90.385 52 4 1 4454 4505 40979258 40979308 4.980000e-07 67.6
91 TraesCS6D01G406900 chr7B 76.369 347 60 15 1300 1634 664400488 664400152 4.770000e-37 167.0
92 TraesCS6D01G406900 chr7B 87.500 136 16 1 4517 4651 327619763 327619628 1.030000e-33 156.0
93 TraesCS6D01G406900 chr7B 81.633 147 24 3 5324 5468 596700882 596701027 1.360000e-22 119.0
94 TraesCS6D01G406900 chr3D 86.184 152 16 4 4514 4660 204942643 204942492 7.990000e-35 159.0
95 TraesCS6D01G406900 chr3D 81.250 192 25 6 1284 1472 18553780 18553963 2.240000e-30 145.0
96 TraesCS6D01G406900 chr3D 81.290 155 25 4 5328 5480 482599255 482599407 1.050000e-23 122.0
97 TraesCS6D01G406900 chr3D 80.380 158 28 3 5325 5479 431235917 431236074 4.880000e-22 117.0
98 TraesCS6D01G406900 chr3D 77.901 181 30 6 7512 7685 39313211 39313388 3.800000e-18 104.0
99 TraesCS6D01G406900 chr3D 88.889 63 6 1 4454 4516 401218990 401218929 8.270000e-10 76.8
100 TraesCS6D01G406900 chr7A 80.769 208 33 6 1301 1501 148476181 148475974 1.030000e-33 156.0
101 TraesCS6D01G406900 chr7A 80.986 142 24 3 5340 5479 186540630 186540770 8.160000e-20 110.0
102 TraesCS6D01G406900 chr7A 79.042 167 27 7 7512 7673 182236956 182237119 2.930000e-19 108.0
103 TraesCS6D01G406900 chr5B 86.301 146 17 3 7512 7655 337843295 337843439 1.030000e-33 156.0
104 TraesCS6D01G406900 chr1D 84.146 164 20 6 7513 7672 435257374 435257213 3.720000e-33 154.0
105 TraesCS6D01G406900 chr1D 85.526 152 17 4 4514 4660 469246228 469246077 3.720000e-33 154.0
106 TraesCS6D01G406900 chr1D 84.000 150 22 2 4516 4663 187383623 187383474 8.040000e-30 143.0
107 TraesCS6D01G406900 chr1D 80.791 177 25 7 7512 7684 40323861 40324032 6.260000e-26 130.0
108 TraesCS6D01G406900 chr1D 84.173 139 15 4 231 368 494936384 494936252 2.250000e-25 128.0
109 TraesCS6D01G406900 chr1D 84.496 129 15 3 1506 1634 72676957 72677080 1.050000e-23 122.0
110 TraesCS6D01G406900 chr1D 91.935 62 5 0 4454 4515 348987135 348987074 3.820000e-13 87.9
111 TraesCS6D01G406900 chr3A 85.135 148 16 4 223 369 571174283 571174425 6.220000e-31 147.0
112 TraesCS6D01G406900 chr1B 77.056 231 34 14 1389 1612 390269048 390268830 1.750000e-21 115.0
113 TraesCS6D01G406900 chrUn 80.822 146 23 3 225 369 48204218 48204359 8.160000e-20 110.0
114 TraesCS6D01G406900 chr1A 86.207 58 7 1 4456 4513 342803475 342803531 2.320000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G406900 chr6D 472961040 472968729 7689 True 14201.000000 14201 100.000000 1 7690 1 chr6D.!!$R1 7689
1 TraesCS6D01G406900 chr6D 472962044 472966605 4561 True 2106.000000 2106 98.025000 2125 6686 2 chr6D.!!$R4 4561
2 TraesCS6D01G406900 chr6D 472939947 472946775 6828 True 946.200000 2050 87.396000 207 6752 10 chr6D.!!$R3 6545
3 TraesCS6D01G406900 chr6A 616857778 616863992 6214 False 1783.950000 3818 92.784500 214 7684 4 chr6A.!!$F1 7470
4 TraesCS6D01G406900 chr6A 616875879 616881583 5704 False 837.340000 1646 85.807600 379 6752 5 chr6A.!!$F2 6373
5 TraesCS6D01G406900 chr6B 718326574 718336213 9639 True 1356.333333 2972 89.464333 20 7684 9 chr6B.!!$R5 7664
6 TraesCS6D01G406900 chr6B 718312216 718319570 7354 True 756.708333 2176 86.784167 207 6752 12 chr6B.!!$R4 6545
7 TraesCS6D01G406900 chr5D 546336803 546338049 1246 False 1615.000000 1615 89.777000 3 1302 1 chr5D.!!$F4 1299

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
419 2068 0.524862 GTACTGGCGAGAGAACCGAA 59.475 55.0 1.44 0.0 0.00 4.30 F
1105 5574 0.039074 CCTTGTCTTCGTCGTGCTCT 60.039 55.0 0.00 0.0 0.00 4.09 F
1447 5971 0.991920 AACATTCGAGGGGTCCACAT 59.008 50.0 0.00 0.0 0.00 3.21 F
2632 12041 1.006825 CATCGACTTTGACGCCGACA 61.007 55.0 0.00 0.0 33.69 4.35 F
3989 14438 0.030101 GCTTGCACGTTGCCAGTTTA 59.970 50.0 10.94 0.0 44.23 2.01 F
4632 16848 0.043334 ACCACTGTCCTCCTAGCCAT 59.957 55.0 0.00 0.0 0.00 4.40 F
4639 16855 0.044092 TCCTCCTAGCCATCCAACCA 59.956 55.0 0.00 0.0 0.00 3.67 F
4640 16856 0.181350 CCTCCTAGCCATCCAACCAC 59.819 60.0 0.00 0.0 0.00 4.16 F
5702 18228 0.391130 CGGAGGAAGGAACGATGCAA 60.391 55.0 0.00 0.0 0.00 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1613 6190 0.389426 CCCTACACCCTTCGTGAACG 60.389 60.000 0.00 0.0 46.20 3.95 R
2632 12041 1.733526 GGAAGCAACGCACCTTGTT 59.266 52.632 0.00 0.0 0.00 2.83 R
3400 12809 1.556911 ACCTCTGTTCGCATCAAGGAT 59.443 47.619 0.00 0.0 0.00 3.24 R
4613 16829 0.043334 ATGGCTAGGAGGACAGTGGT 59.957 55.000 0.00 0.0 0.00 4.16 R
5528 18054 0.233332 GTTCACTGCTGAAGTCGCAC 59.767 55.000 0.00 0.0 37.06 5.34 R
5630 18156 1.040646 CATTCTCTGGCCGGTAGCTA 58.959 55.000 12.43 0.0 43.05 3.32 R
5702 18228 1.457831 GGTCACCTCCCGGATAGCT 60.458 63.158 0.73 0.0 0.00 3.32 R
5855 18381 2.278596 CCATCGTACTCCCGCACG 60.279 66.667 0.00 0.0 39.48 5.34 R
6716 19245 0.104855 TCGCTTCTCGGCAGCATTAT 59.895 50.000 0.00 0.0 37.07 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
197 198 6.801539 ATATGCACTACATTATGAAACGGG 57.198 37.500 0.00 0.00 40.38 5.28
240 1868 5.485353 TGGTAATTTGGGCCATATTTTGACA 59.515 36.000 24.16 15.68 0.00 3.58
241 1869 6.013379 TGGTAATTTGGGCCATATTTTGACAA 60.013 34.615 24.16 10.05 0.00 3.18
242 1870 7.053498 GGTAATTTGGGCCATATTTTGACAAT 58.947 34.615 24.16 7.88 0.00 2.71
243 1871 7.555914 GGTAATTTGGGCCATATTTTGACAATT 59.444 33.333 24.16 17.01 0.00 2.32
419 2068 0.524862 GTACTGGCGAGAGAACCGAA 59.475 55.000 1.44 0.00 0.00 4.30
463 2112 6.551601 AGAGATTAATGTGTAACGGGAGATCT 59.448 38.462 0.00 0.00 42.39 2.75
481 2131 6.294397 GGAGATCTGATTTTCATGGGCAATAC 60.294 42.308 0.00 0.00 0.00 1.89
483 2133 6.781014 AGATCTGATTTTCATGGGCAATACAT 59.219 34.615 0.00 0.00 0.00 2.29
501 2151 3.750371 ACATGAAAGATTCCACGTTCCA 58.250 40.909 0.00 0.00 0.00 3.53
573 2227 3.430929 CCGAGGGAGTATATGCTAATGCC 60.431 52.174 0.00 0.00 38.71 4.40
690 2499 4.650588 ACAAATGGATGGAGAGAGAGAGAG 59.349 45.833 0.00 0.00 0.00 3.20
691 2500 4.812403 AATGGATGGAGAGAGAGAGAGA 57.188 45.455 0.00 0.00 0.00 3.10
692 2501 3.862877 TGGATGGAGAGAGAGAGAGAG 57.137 52.381 0.00 0.00 0.00 3.20
693 2502 3.392730 TGGATGGAGAGAGAGAGAGAGA 58.607 50.000 0.00 0.00 0.00 3.10
777 5159 2.199291 GCAGTTGTGCCATTATGAGC 57.801 50.000 0.00 0.00 44.72 4.26
825 5213 2.393646 AGAGACCCAGTCTGGATTAGC 58.606 52.381 21.23 5.63 43.53 3.09
859 5259 1.685517 TCAGGAAGGAGATCGCATCAG 59.314 52.381 0.00 0.00 0.00 2.90
915 5372 6.936900 ACTAAATCCCATGCACACATATACTC 59.063 38.462 0.00 0.00 33.67 2.59
916 5373 4.980339 ATCCCATGCACACATATACTCA 57.020 40.909 0.00 0.00 33.67 3.41
917 5374 4.071961 TCCCATGCACACATATACTCAC 57.928 45.455 0.00 0.00 33.67 3.51
918 5375 3.711190 TCCCATGCACACATATACTCACT 59.289 43.478 0.00 0.00 33.67 3.41
919 5376 4.060900 CCCATGCACACATATACTCACTC 58.939 47.826 0.00 0.00 33.67 3.51
920 5377 4.060900 CCATGCACACATATACTCACTCC 58.939 47.826 0.00 0.00 33.67 3.85
921 5378 4.202295 CCATGCACACATATACTCACTCCT 60.202 45.833 0.00 0.00 33.67 3.69
922 5379 5.011023 CCATGCACACATATACTCACTCCTA 59.989 44.000 0.00 0.00 33.67 2.94
1052 5521 4.982701 GCTTGTGGGCAGGGCAGT 62.983 66.667 0.00 0.00 0.00 4.40
1075 5544 2.032681 GGGCTCTCGTGTGGCTTT 59.967 61.111 11.94 0.00 33.55 3.51
1105 5574 0.039074 CCTTGTCTTCGTCGTGCTCT 60.039 55.000 0.00 0.00 0.00 4.09
1306 5821 2.504519 GTGTGATACCTCCCGGGC 59.495 66.667 18.49 0.00 39.10 6.13
1335 5850 4.082300 TGCGCCATCATGAACAGTAAATTT 60.082 37.500 4.18 0.00 0.00 1.82
1395 5914 7.757941 TTAGGACATCAAACATGATCAAACA 57.242 32.000 0.00 0.00 0.00 2.83
1423 5942 1.229428 TCTTGCGAAGTTTCAGCCAG 58.771 50.000 0.00 5.43 0.00 4.85
1440 5964 2.618709 GCCAGAAATAACATTCGAGGGG 59.381 50.000 0.00 0.00 34.46 4.79
1443 5967 3.877508 CAGAAATAACATTCGAGGGGTCC 59.122 47.826 0.00 0.00 34.46 4.46
1447 5971 0.991920 AACATTCGAGGGGTCCACAT 59.008 50.000 0.00 0.00 0.00 3.21
1448 5972 1.874129 ACATTCGAGGGGTCCACATA 58.126 50.000 0.00 0.00 0.00 2.29
1530 6107 2.643551 CCTCGGATGTTATTTGTGGCT 58.356 47.619 0.00 0.00 0.00 4.75
1549 6126 3.737774 GGCTGAAACTTTGCAAGAACATC 59.262 43.478 0.00 0.00 0.00 3.06
1678 6325 3.778618 TGAGCTTGATCGTTCTCTGATG 58.221 45.455 0.00 0.00 0.00 3.07
1741 6389 5.066375 TGTGGCAGATCCTTCATTTAATTCG 59.934 40.000 0.00 0.00 35.26 3.34
2042 6911 7.442969 TGTGTTAGTTTTACACTACCAATGGAG 59.557 37.037 6.16 1.44 44.76 3.86
2051 6920 5.745227 ACACTACCAATGGAGTAATCCAAG 58.255 41.667 17.08 10.97 43.83 3.61
2632 12041 1.006825 CATCGACTTTGACGCCGACA 61.007 55.000 0.00 0.00 33.69 4.35
2766 12175 1.522355 CCGGTCGGTCTACTCGCTA 60.522 63.158 0.55 0.00 0.00 4.26
3021 12430 1.302511 CAACCTGGTGTTCCTCCCG 60.303 63.158 0.00 0.00 34.00 5.14
3045 12454 3.276846 GCGACGTTGGTGCAGGTT 61.277 61.111 4.64 0.00 0.00 3.50
3093 12502 1.735198 CAATGCTGCCTTTGGTGCG 60.735 57.895 0.00 0.00 0.00 5.34
3427 12836 6.417191 TTGATGCGAACAGAGGTAAATAAC 57.583 37.500 0.00 0.00 0.00 1.89
3446 12855 3.963428 ACTACTTGTTCTCCGCAGAAT 57.037 42.857 0.00 0.00 40.88 2.40
3468 12877 4.946784 ACACAGTTTCAGTCAGTTTGTC 57.053 40.909 0.00 0.00 0.00 3.18
3536 12952 1.036707 CTCCAAAACGAAAAGGGGCA 58.963 50.000 0.00 0.00 0.00 5.36
3561 12977 1.884235 CCATGAAGGCGGGATTAGAC 58.116 55.000 0.00 0.00 0.00 2.59
3608 13024 8.138365 ACGTACCAAGTTTTATACTGCATATG 57.862 34.615 0.00 0.00 37.12 1.78
3620 13036 3.350766 GCATATGCAAACACTGGGC 57.649 52.632 22.84 0.00 41.59 5.36
3634 13050 2.097825 ACTGGGCATTTGCATCTCTTC 58.902 47.619 4.74 0.00 44.36 2.87
3635 13051 2.097036 CTGGGCATTTGCATCTCTTCA 58.903 47.619 4.74 0.00 44.36 3.02
3636 13052 2.693591 CTGGGCATTTGCATCTCTTCAT 59.306 45.455 4.74 0.00 44.36 2.57
3637 13053 3.887110 CTGGGCATTTGCATCTCTTCATA 59.113 43.478 4.74 0.00 44.36 2.15
3638 13054 3.887110 TGGGCATTTGCATCTCTTCATAG 59.113 43.478 4.74 0.00 44.36 2.23
3658 13074 7.573710 TCATAGTTCATAATTAGGTTGTGGCT 58.426 34.615 0.00 0.00 30.61 4.75
3684 13101 2.550606 GGTGGCAACGAGAAAACATGTA 59.449 45.455 0.00 0.00 42.51 2.29
3694 13111 5.218885 CGAGAAAACATGTAATTGTTGGCA 58.781 37.500 0.00 0.00 39.68 4.92
3713 13362 4.814234 TGGCAATACTAGAATTTGGTAGCG 59.186 41.667 0.00 0.00 0.00 4.26
3767 13417 7.756722 ACGTTAGTTGTACAGTACCAACATATC 59.243 37.037 19.56 10.93 0.00 1.63
3824 14215 5.116180 TCTTTAGAGCCACCATGTTAATCG 58.884 41.667 0.00 0.00 0.00 3.34
3902 14294 7.039313 TGTGAGATAGAGTATATTTGTGCGT 57.961 36.000 0.00 0.00 0.00 5.24
3906 14298 6.817184 AGATAGAGTATATTTGTGCGTGGTT 58.183 36.000 0.00 0.00 0.00 3.67
3917 14309 2.287308 TGTGCGTGGTTCTATGTTTTGC 60.287 45.455 0.00 0.00 0.00 3.68
3921 14313 2.668279 CGTGGTTCTATGTTTTGCCAGC 60.668 50.000 0.00 0.00 0.00 4.85
3948 14340 5.411361 TGGATCTCCACGTCTTTACATTTTG 59.589 40.000 0.00 0.00 42.01 2.44
3977 14426 1.007502 TGCAACCATTCGCTTGCAC 60.008 52.632 4.82 0.00 46.07 4.57
3985 14434 2.462255 ATTCGCTTGCACGTTGCCAG 62.462 55.000 7.38 7.01 44.23 4.85
3986 14435 3.952675 CGCTTGCACGTTGCCAGT 61.953 61.111 10.94 0.00 44.23 4.00
3987 14436 2.412937 GCTTGCACGTTGCCAGTT 59.587 55.556 10.94 0.00 44.23 3.16
3988 14437 1.226945 GCTTGCACGTTGCCAGTTT 60.227 52.632 10.94 0.00 44.23 2.66
3989 14438 0.030101 GCTTGCACGTTGCCAGTTTA 59.970 50.000 10.94 0.00 44.23 2.01
3990 14439 1.925946 GCTTGCACGTTGCCAGTTTAG 60.926 52.381 10.94 0.00 44.23 1.85
3991 14440 1.601903 CTTGCACGTTGCCAGTTTAGA 59.398 47.619 7.38 0.00 44.23 2.10
3992 14441 1.225855 TGCACGTTGCCAGTTTAGAG 58.774 50.000 7.38 0.00 44.23 2.43
4010 14459 2.500098 AGAGTTTGTAGCCGATTAGCCA 59.500 45.455 0.00 0.00 0.00 4.75
4014 14463 4.705023 AGTTTGTAGCCGATTAGCCATTTT 59.295 37.500 0.00 0.00 0.00 1.82
4017 14466 4.771903 TGTAGCCGATTAGCCATTTTGTA 58.228 39.130 0.00 0.00 0.00 2.41
4018 14467 5.373222 TGTAGCCGATTAGCCATTTTGTAT 58.627 37.500 0.00 0.00 0.00 2.29
4020 14469 6.993308 TGTAGCCGATTAGCCATTTTGTATTA 59.007 34.615 0.00 0.00 0.00 0.98
4021 14470 6.952773 AGCCGATTAGCCATTTTGTATTAA 57.047 33.333 0.00 0.00 0.00 1.40
4022 14471 6.735130 AGCCGATTAGCCATTTTGTATTAAC 58.265 36.000 0.00 0.00 0.00 2.01
4023 14472 6.320164 AGCCGATTAGCCATTTTGTATTAACA 59.680 34.615 0.00 0.00 0.00 2.41
4051 14509 5.203060 ACCTCGCAAAGTAGAATCCTATC 57.797 43.478 0.00 0.00 0.00 2.08
4092 14568 3.817709 AGCAAGCAGAATCTCTACCTC 57.182 47.619 0.00 0.00 0.00 3.85
4111 14587 3.133721 CCTCATTCCTCTCTTTCACCGAT 59.866 47.826 0.00 0.00 0.00 4.18
4142 16185 3.846588 ACCATAGATTCCATTAGCCCGAT 59.153 43.478 0.00 0.00 0.00 4.18
4232 16275 0.676736 TGCTCACATGTGGACACGTA 59.323 50.000 25.16 3.49 0.00 3.57
4292 16338 5.836024 AACTGAGGTTAATAGAACCCACA 57.164 39.130 2.84 3.91 41.18 4.17
4319 16365 2.422597 TGTAATGTTTCAGCCAGGTCG 58.577 47.619 0.00 0.00 0.00 4.79
4381 16590 9.909644 ATAGTGACACAAGATTCCGTTATATAC 57.090 33.333 8.59 0.00 0.00 1.47
4382 16591 8.008513 AGTGACACAAGATTCCGTTATATACT 57.991 34.615 8.59 0.00 0.00 2.12
4383 16592 9.128404 AGTGACACAAGATTCCGTTATATACTA 57.872 33.333 8.59 0.00 0.00 1.82
4384 16593 9.909644 GTGACACAAGATTCCGTTATATACTAT 57.090 33.333 0.00 0.00 0.00 2.12
4486 16702 3.108343 GCAGATGCAAGCGCTCAT 58.892 55.556 12.06 11.47 41.59 2.90
4487 16703 2.314256 GCAGATGCAAGCGCTCATA 58.686 52.632 12.06 0.00 41.59 2.15
4488 16704 0.873054 GCAGATGCAAGCGCTCATAT 59.127 50.000 12.06 5.22 41.59 1.78
4489 16705 2.071540 GCAGATGCAAGCGCTCATATA 58.928 47.619 12.06 0.00 41.59 0.86
4490 16706 2.676839 GCAGATGCAAGCGCTCATATAT 59.323 45.455 12.06 0.81 41.59 0.86
4491 16707 3.867493 GCAGATGCAAGCGCTCATATATA 59.133 43.478 12.06 0.00 41.59 0.86
4492 16708 4.260132 GCAGATGCAAGCGCTCATATATAC 60.260 45.833 12.06 0.00 41.59 1.47
4493 16709 4.866486 CAGATGCAAGCGCTCATATATACA 59.134 41.667 12.06 0.00 39.64 2.29
4494 16710 4.867047 AGATGCAAGCGCTCATATATACAC 59.133 41.667 12.06 0.00 39.64 2.90
4495 16711 3.988819 TGCAAGCGCTCATATATACACA 58.011 40.909 12.06 0.00 39.64 3.72
4496 16712 3.740832 TGCAAGCGCTCATATATACACAC 59.259 43.478 12.06 0.00 39.64 3.82
4497 16713 3.740832 GCAAGCGCTCATATATACACACA 59.259 43.478 12.06 0.00 34.30 3.72
4498 16714 4.389992 GCAAGCGCTCATATATACACACAT 59.610 41.667 12.06 0.00 34.30 3.21
4499 16715 5.576774 GCAAGCGCTCATATATACACACATA 59.423 40.000 12.06 0.00 34.30 2.29
4500 16716 6.454318 GCAAGCGCTCATATATACACACATAC 60.454 42.308 12.06 0.00 34.30 2.39
4501 16717 6.267496 AGCGCTCATATATACACACATACA 57.733 37.500 2.64 0.00 0.00 2.29
4502 16718 6.093404 AGCGCTCATATATACACACATACAC 58.907 40.000 2.64 0.00 0.00 2.90
4503 16719 6.071896 AGCGCTCATATATACACACATACACT 60.072 38.462 2.64 0.00 0.00 3.55
4504 16720 6.251589 GCGCTCATATATACACACATACACTC 59.748 42.308 0.00 0.00 0.00 3.51
4505 16721 7.305474 CGCTCATATATACACACATACACTCA 58.695 38.462 0.00 0.00 0.00 3.41
4506 16722 7.970614 CGCTCATATATACACACATACACTCAT 59.029 37.037 0.00 0.00 0.00 2.90
4507 16723 9.295214 GCTCATATATACACACATACACTCATC 57.705 37.037 0.00 0.00 0.00 2.92
4508 16724 9.495754 CTCATATATACACACATACACTCATCG 57.504 37.037 0.00 0.00 0.00 3.84
4509 16725 7.968405 TCATATATACACACATACACTCATCGC 59.032 37.037 0.00 0.00 0.00 4.58
4510 16726 4.655762 ATACACACATACACTCATCGCT 57.344 40.909 0.00 0.00 0.00 4.93
4511 16727 5.767816 ATACACACATACACTCATCGCTA 57.232 39.130 0.00 0.00 0.00 4.26
4512 16728 4.655762 ACACACATACACTCATCGCTAT 57.344 40.909 0.00 0.00 0.00 2.97
4513 16729 4.363138 ACACACATACACTCATCGCTATG 58.637 43.478 0.00 0.00 0.00 2.23
4514 16730 4.097892 ACACACATACACTCATCGCTATGA 59.902 41.667 0.48 0.48 39.87 2.15
4523 16739 3.667497 TCATCGCTATGAGGGAATGTC 57.333 47.619 0.00 0.00 40.66 3.06
4524 16740 3.234353 TCATCGCTATGAGGGAATGTCT 58.766 45.455 0.00 0.00 40.66 3.41
4525 16741 3.256879 TCATCGCTATGAGGGAATGTCTC 59.743 47.826 0.00 0.00 40.66 3.36
4526 16742 1.964223 TCGCTATGAGGGAATGTCTCC 59.036 52.381 0.00 0.00 44.54 3.71
4544 16760 3.499737 CCCCACTGAACGCGCATC 61.500 66.667 5.73 5.66 0.00 3.91
4545 16761 3.499737 CCCACTGAACGCGCATCC 61.500 66.667 5.73 0.00 0.00 3.51
4546 16762 3.499737 CCACTGAACGCGCATCCC 61.500 66.667 5.73 0.00 0.00 3.85
4547 16763 3.499737 CACTGAACGCGCATCCCC 61.500 66.667 5.73 0.00 0.00 4.81
4549 16765 4.812476 CTGAACGCGCATCCCCGA 62.812 66.667 5.73 0.00 0.00 5.14
4550 16766 4.380781 TGAACGCGCATCCCCGAA 62.381 61.111 5.73 0.00 0.00 4.30
4551 16767 3.122323 GAACGCGCATCCCCGAAA 61.122 61.111 5.73 0.00 0.00 3.46
4552 16768 2.670251 AACGCGCATCCCCGAAAA 60.670 55.556 5.73 0.00 0.00 2.29
4553 16769 1.988834 GAACGCGCATCCCCGAAAAT 61.989 55.000 5.73 0.00 0.00 1.82
4554 16770 1.988834 AACGCGCATCCCCGAAAATC 61.989 55.000 5.73 0.00 0.00 2.17
4555 16771 2.721859 GCGCATCCCCGAAAATCC 59.278 61.111 0.30 0.00 0.00 3.01
4556 16772 1.823899 GCGCATCCCCGAAAATCCT 60.824 57.895 0.30 0.00 0.00 3.24
4557 16773 2.024918 CGCATCCCCGAAAATCCTG 58.975 57.895 0.00 0.00 0.00 3.86
4558 16774 0.463654 CGCATCCCCGAAAATCCTGA 60.464 55.000 0.00 0.00 0.00 3.86
4559 16775 1.762708 GCATCCCCGAAAATCCTGAA 58.237 50.000 0.00 0.00 0.00 3.02
4560 16776 2.099405 GCATCCCCGAAAATCCTGAAA 58.901 47.619 0.00 0.00 0.00 2.69
4561 16777 2.695147 GCATCCCCGAAAATCCTGAAAT 59.305 45.455 0.00 0.00 0.00 2.17
4562 16778 3.888930 GCATCCCCGAAAATCCTGAAATA 59.111 43.478 0.00 0.00 0.00 1.40
4563 16779 4.340950 GCATCCCCGAAAATCCTGAAATAA 59.659 41.667 0.00 0.00 0.00 1.40
4564 16780 5.163457 GCATCCCCGAAAATCCTGAAATAAA 60.163 40.000 0.00 0.00 0.00 1.40
4565 16781 6.462909 GCATCCCCGAAAATCCTGAAATAAAT 60.463 38.462 0.00 0.00 0.00 1.40
4566 16782 6.709018 TCCCCGAAAATCCTGAAATAAATC 57.291 37.500 0.00 0.00 0.00 2.17
4567 16783 5.596772 TCCCCGAAAATCCTGAAATAAATCC 59.403 40.000 0.00 0.00 0.00 3.01
4568 16784 5.362430 CCCCGAAAATCCTGAAATAAATCCA 59.638 40.000 0.00 0.00 0.00 3.41
4569 16785 6.461509 CCCCGAAAATCCTGAAATAAATCCAG 60.462 42.308 0.00 0.00 0.00 3.86
4570 16786 6.461509 CCCGAAAATCCTGAAATAAATCCAGG 60.462 42.308 0.00 0.00 46.64 4.45
4578 16794 6.817270 CTGAAATAAATCCAGGAAAATGCG 57.183 37.500 0.00 0.00 0.00 4.73
4579 16795 6.522625 TGAAATAAATCCAGGAAAATGCGA 57.477 33.333 0.00 0.00 0.00 5.10
4580 16796 6.563422 TGAAATAAATCCAGGAAAATGCGAG 58.437 36.000 0.00 0.00 0.00 5.03
4581 16797 2.947448 AAATCCAGGAAAATGCGAGC 57.053 45.000 0.00 0.00 0.00 5.03
4582 16798 1.838112 AATCCAGGAAAATGCGAGCA 58.162 45.000 0.00 0.00 0.00 4.26
4583 16799 1.098050 ATCCAGGAAAATGCGAGCAC 58.902 50.000 0.00 0.00 0.00 4.40
4584 16800 0.960364 TCCAGGAAAATGCGAGCACC 60.960 55.000 0.00 0.00 0.00 5.01
4585 16801 1.243342 CCAGGAAAATGCGAGCACCA 61.243 55.000 0.00 0.00 0.00 4.17
4586 16802 0.169672 CAGGAAAATGCGAGCACCAG 59.830 55.000 0.00 0.00 0.00 4.00
4587 16803 0.962356 AGGAAAATGCGAGCACCAGG 60.962 55.000 0.00 0.00 0.00 4.45
4588 16804 0.960364 GGAAAATGCGAGCACCAGGA 60.960 55.000 0.00 0.00 0.00 3.86
4589 16805 0.169009 GAAAATGCGAGCACCAGGAC 59.831 55.000 0.00 0.00 0.00 3.85
4590 16806 0.250901 AAAATGCGAGCACCAGGACT 60.251 50.000 0.00 0.00 0.00 3.85
4591 16807 0.250901 AAATGCGAGCACCAGGACTT 60.251 50.000 0.00 0.00 0.00 3.01
4592 16808 0.957395 AATGCGAGCACCAGGACTTG 60.957 55.000 0.00 0.00 0.00 3.16
4602 16818 3.254629 CAGGACTTGGACCATGGTG 57.745 57.895 25.52 10.59 0.00 4.17
4603 16819 0.322816 CAGGACTTGGACCATGGTGG 60.323 60.000 25.52 11.85 45.02 4.61
4604 16820 1.000896 GGACTTGGACCATGGTGGG 60.001 63.158 25.52 11.48 43.37 4.61
4610 16826 2.919043 GACCATGGTGGGCTAGGG 59.081 66.667 25.52 0.00 44.12 3.53
4611 16827 1.692749 GACCATGGTGGGCTAGGGA 60.693 63.158 25.52 0.00 44.12 4.20
4612 16828 1.006092 ACCATGGTGGGCTAGGGAT 59.994 57.895 18.99 0.00 43.37 3.85
4613 16829 0.270699 ACCATGGTGGGCTAGGGATA 59.729 55.000 18.99 0.00 43.37 2.59
4614 16830 0.693049 CCATGGTGGGCTAGGGATAC 59.307 60.000 2.57 0.00 32.67 2.24
4629 16845 1.964933 GGATACCACTGTCCTCCTAGC 59.035 57.143 0.00 0.00 0.00 3.42
4630 16846 1.964933 GATACCACTGTCCTCCTAGCC 59.035 57.143 0.00 0.00 0.00 3.93
4631 16847 0.708209 TACCACTGTCCTCCTAGCCA 59.292 55.000 0.00 0.00 0.00 4.75
4632 16848 0.043334 ACCACTGTCCTCCTAGCCAT 59.957 55.000 0.00 0.00 0.00 4.40
4633 16849 0.755686 CCACTGTCCTCCTAGCCATC 59.244 60.000 0.00 0.00 0.00 3.51
4634 16850 0.755686 CACTGTCCTCCTAGCCATCC 59.244 60.000 0.00 0.00 0.00 3.51
4635 16851 0.339859 ACTGTCCTCCTAGCCATCCA 59.660 55.000 0.00 0.00 0.00 3.41
4636 16852 1.273838 ACTGTCCTCCTAGCCATCCAA 60.274 52.381 0.00 0.00 0.00 3.53
4637 16853 1.139853 CTGTCCTCCTAGCCATCCAAC 59.860 57.143 0.00 0.00 0.00 3.77
4638 16854 0.470341 GTCCTCCTAGCCATCCAACC 59.530 60.000 0.00 0.00 0.00 3.77
4639 16855 0.044092 TCCTCCTAGCCATCCAACCA 59.956 55.000 0.00 0.00 0.00 3.67
4640 16856 0.181350 CCTCCTAGCCATCCAACCAC 59.819 60.000 0.00 0.00 0.00 4.16
4641 16857 0.911769 CTCCTAGCCATCCAACCACA 59.088 55.000 0.00 0.00 0.00 4.17
4642 16858 1.492176 CTCCTAGCCATCCAACCACAT 59.508 52.381 0.00 0.00 0.00 3.21
4643 16859 1.212688 TCCTAGCCATCCAACCACATG 59.787 52.381 0.00 0.00 0.00 3.21
4644 16860 1.064463 CCTAGCCATCCAACCACATGT 60.064 52.381 0.00 0.00 0.00 3.21
4645 16861 2.621407 CCTAGCCATCCAACCACATGTT 60.621 50.000 0.00 0.00 37.80 2.71
4832 17153 4.875544 TTTTCAGAGCACACACTACAAC 57.124 40.909 0.00 0.00 0.00 3.32
4836 17157 3.321968 TCAGAGCACACACTACAACATCT 59.678 43.478 0.00 0.00 0.00 2.90
4840 17161 2.337583 CACACACTACAACATCTCGGG 58.662 52.381 0.00 0.00 0.00 5.14
4861 17182 7.562135 TCGGGCTAACAGTAAATAAGAAAGAT 58.438 34.615 0.00 0.00 0.00 2.40
4882 17203 7.862512 AGATGCAAAAATGGTGAAAGAAAAA 57.137 28.000 0.00 0.00 0.00 1.94
4945 17270 8.918202 AACAATGTAGATGTTTACCAAGAGAA 57.082 30.769 0.00 0.00 37.74 2.87
5006 17333 6.879276 AAAAAGTAGCCTCTGTTTAGAACC 57.121 37.500 0.00 0.00 31.21 3.62
5009 17336 5.408880 AGTAGCCTCTGTTTAGAACCTTC 57.591 43.478 0.00 0.00 31.21 3.46
5010 17337 5.088026 AGTAGCCTCTGTTTAGAACCTTCT 58.912 41.667 0.00 0.00 41.24 2.85
5011 17338 4.278975 AGCCTCTGTTTAGAACCTTCTG 57.721 45.455 0.00 0.00 38.19 3.02
5023 17350 1.692411 ACCTTCTGTTTTGCCCAGAC 58.308 50.000 0.00 0.00 38.62 3.51
5196 17530 9.639563 ATTTATCACAATACATGTATGAACCCA 57.360 29.630 18.94 2.56 41.46 4.51
5211 17545 2.127271 ACCCATGCACGAATTGATGA 57.873 45.000 0.00 0.00 0.00 2.92
5215 17549 3.627123 CCCATGCACGAATTGATGACTAA 59.373 43.478 0.00 0.00 0.00 2.24
5270 17763 7.740519 GGAATAATCCAACGACAATTGAAAG 57.259 36.000 13.59 5.29 45.79 2.62
5275 17768 5.568685 TCCAACGACAATTGAAAGTTTCA 57.431 34.783 14.35 14.35 38.04 2.69
5284 17777 7.059945 CGACAATTGAAAGTTTCATAAGAGTGC 59.940 37.037 18.69 8.72 39.84 4.40
5285 17778 7.715657 ACAATTGAAAGTTTCATAAGAGTGCA 58.284 30.769 18.69 1.43 39.84 4.57
5308 17801 8.311109 TGCAAAAAGAAAACCTAAGAGAAGTTT 58.689 29.630 0.00 0.00 35.29 2.66
5314 17807 9.901172 AAGAAAACCTAAGAGAAGTTTCTAACA 57.099 29.630 0.00 0.00 37.73 2.41
5374 17867 8.785329 AAGATGTTCTACCTCTTTTTCTGATC 57.215 34.615 0.00 0.00 30.53 2.92
5376 17869 6.433847 TGTTCTACCTCTTTTTCTGATCCA 57.566 37.500 0.00 0.00 0.00 3.41
5380 17873 6.882656 TCTACCTCTTTTTCTGATCCAGATG 58.117 40.000 0.00 0.00 40.39 2.90
5391 17884 8.727100 TTTCTGATCCAGATGTATATAGTGGT 57.273 34.615 0.00 0.00 40.39 4.16
5526 18052 1.266175 CAGCACCAAGAAGCAAGTCAG 59.734 52.381 0.00 0.00 0.00 3.51
5528 18054 1.002033 GCACCAAGAAGCAAGTCAGTG 60.002 52.381 0.00 0.00 0.00 3.66
5573 18099 3.201930 TGGACATATGTACCATGCAAGGT 59.798 43.478 18.99 18.99 45.72 3.50
5618 18144 1.441515 CACCGTGTACGTGGTCTCG 60.442 63.158 5.90 1.68 35.96 4.04
5630 18156 1.037579 TGGTCTCGGCGTCTGATGAT 61.038 55.000 6.85 0.00 0.00 2.45
5702 18228 0.391130 CGGAGGAAGGAACGATGCAA 60.391 55.000 0.00 0.00 0.00 4.08
5855 18381 2.834549 TCTCATCCCTCTCTTCAACACC 59.165 50.000 0.00 0.00 0.00 4.16
5873 18399 2.890371 GTGCGGGAGTACGATGGT 59.110 61.111 0.00 0.00 35.32 3.55
6712 19238 1.885388 CACGTTGTGCCCTTGACGA 60.885 57.895 1.50 0.00 38.74 4.20
6716 19245 0.736053 GTTGTGCCCTTGACGAAACA 59.264 50.000 0.00 0.00 0.00 2.83
6739 19268 3.267860 CTGCCGAGAAGCGATGCC 61.268 66.667 0.00 0.00 44.57 4.40
6755 19284 4.256110 CGATGCCATCTATATGAAAGCCA 58.744 43.478 2.75 0.00 34.84 4.75
6775 19304 3.220110 CATCAATGATGGGGTCAAGGAG 58.780 50.000 15.09 0.00 40.97 3.69
6781 19310 4.475135 GGGGTCAAGGAGGAGCGC 62.475 72.222 0.00 0.00 40.26 5.92
6783 19312 2.058595 GGGTCAAGGAGGAGCGCTA 61.059 63.158 11.50 0.00 36.17 4.26
6838 19367 2.348498 CGCGGTGATCAATTGTAATCGG 60.348 50.000 5.13 1.93 0.00 4.18
6872 19401 1.001406 GAGTCTACTTGTGGCAGTGCT 59.999 52.381 16.11 0.00 0.00 4.40
6894 19423 1.438651 TTCAATAGTGCACACCTCGC 58.561 50.000 21.04 0.00 0.00 5.03
6895 19424 0.391130 TCAATAGTGCACACCTCGCC 60.391 55.000 21.04 0.00 0.00 5.54
6896 19425 1.447838 AATAGTGCACACCTCGCCG 60.448 57.895 21.04 0.00 0.00 6.46
6897 19426 1.884075 AATAGTGCACACCTCGCCGA 61.884 55.000 21.04 0.00 0.00 5.54
6898 19427 1.884075 ATAGTGCACACCTCGCCGAA 61.884 55.000 21.04 0.00 0.00 4.30
6899 19428 2.089887 TAGTGCACACCTCGCCGAAA 62.090 55.000 21.04 0.00 0.00 3.46
6900 19429 2.203084 TGCACACCTCGCCGAAAA 60.203 55.556 0.00 0.00 0.00 2.29
6901 19430 2.251371 GCACACCTCGCCGAAAAC 59.749 61.111 0.00 0.00 0.00 2.43
6902 19431 2.539338 GCACACCTCGCCGAAAACA 61.539 57.895 0.00 0.00 0.00 2.83
6903 19432 1.278637 CACACCTCGCCGAAAACAC 59.721 57.895 0.00 0.00 0.00 3.32
6904 19433 2.241880 ACACCTCGCCGAAAACACG 61.242 57.895 0.00 0.00 0.00 4.49
6943 19472 9.592720 CAAGCAATTTTATTTTAACGGAAAAGG 57.407 29.630 4.20 0.00 40.34 3.11
6944 19473 9.549078 AAGCAATTTTATTTTAACGGAAAAGGA 57.451 25.926 4.20 0.00 40.34 3.36
6945 19474 9.549078 AGCAATTTTATTTTAACGGAAAAGGAA 57.451 25.926 4.20 0.00 40.34 3.36
6946 19475 9.805966 GCAATTTTATTTTAACGGAAAAGGAAG 57.194 29.630 4.20 0.00 40.34 3.46
6991 19520 9.598517 AAAAGAACTACAAAATTCAAGCAATGA 57.401 25.926 0.00 0.00 35.85 2.57
6992 19521 8.807667 AAGAACTACAAAATTCAAGCAATGAG 57.192 30.769 0.00 0.00 39.77 2.90
6993 19522 8.169977 AGAACTACAAAATTCAAGCAATGAGA 57.830 30.769 0.00 0.00 39.77 3.27
6994 19523 8.632679 AGAACTACAAAATTCAAGCAATGAGAA 58.367 29.630 0.00 0.00 39.77 2.87
6995 19524 9.248291 GAACTACAAAATTCAAGCAATGAGAAA 57.752 29.630 0.00 0.00 39.77 2.52
6996 19525 8.807667 ACTACAAAATTCAAGCAATGAGAAAG 57.192 30.769 0.00 0.00 39.77 2.62
6997 19526 6.535274 ACAAAATTCAAGCAATGAGAAAGC 57.465 33.333 0.00 0.00 39.77 3.51
6998 19527 6.050432 ACAAAATTCAAGCAATGAGAAAGCA 58.950 32.000 0.00 0.00 39.77 3.91
6999 19528 6.018507 ACAAAATTCAAGCAATGAGAAAGCAC 60.019 34.615 0.00 0.00 39.77 4.40
7000 19529 3.648339 TTCAAGCAATGAGAAAGCACC 57.352 42.857 0.00 0.00 39.77 5.01
7001 19530 2.867624 TCAAGCAATGAGAAAGCACCT 58.132 42.857 0.00 0.00 33.04 4.00
7071 19708 5.886960 AAATGAGACCTAGTGCATTGAAC 57.113 39.130 0.00 0.00 31.86 3.18
7079 19716 6.714810 AGACCTAGTGCATTGAACAACAATAA 59.285 34.615 0.00 0.00 46.01 1.40
7081 19718 5.794945 CCTAGTGCATTGAACAACAATAACG 59.205 40.000 0.00 0.00 46.01 3.18
7175 19819 0.947960 TGCCCATACAAACACACACG 59.052 50.000 0.00 0.00 0.00 4.49
7260 19909 8.979574 CCCGAAATCACTAATTAAGATGTACTC 58.020 37.037 0.00 0.00 0.00 2.59
7286 19935 2.444895 GATCACTCCCGCCTCCCT 60.445 66.667 0.00 0.00 0.00 4.20
7302 19951 0.320374 CCCTAGGTTGCGACAAGTGA 59.680 55.000 8.29 0.00 0.00 3.41
7327 19976 1.300080 GCATGTGCGCCACTTGTTT 60.300 52.632 4.18 0.00 40.25 2.83
7335 19984 0.738389 CGCCACTTGTTTCAACCTGT 59.262 50.000 0.00 0.00 0.00 4.00
7338 19987 2.223572 GCCACTTGTTTCAACCTGTGAG 60.224 50.000 11.43 5.61 37.61 3.51
7345 19994 4.082845 TGTTTCAACCTGTGAGTTTTCCA 58.917 39.130 0.00 0.00 37.61 3.53
7378 20027 6.730960 AGATCCGTTTATTCAAAGCGTTTA 57.269 33.333 0.00 0.00 0.00 2.01
7398 20047 7.417496 GTTTAATCTCTTAAACCGTGTGTCT 57.583 36.000 8.95 0.00 45.73 3.41
7424 20073 3.697045 TCTCAAACCGTTTTCACCATTGT 59.303 39.130 0.00 0.00 0.00 2.71
7450 20099 4.467795 TCCTCAGGTCGAGATCTTCAAAAT 59.532 41.667 0.00 0.00 45.45 1.82
7475 20124 4.336433 AGATCGCATGTTGATAGGTTTTGG 59.664 41.667 0.00 0.00 0.00 3.28
7538 20198 1.871039 CCTTTTCGAAAGAGGCACGAA 59.129 47.619 19.33 0.00 43.69 3.85
7585 20245 2.642311 TGCCTCCATGAGAAGTAAACCA 59.358 45.455 0.00 0.00 0.00 3.67
7595 20256 2.567615 AGAAGTAAACCATGCCTCTCGT 59.432 45.455 0.00 0.00 0.00 4.18
7596 20257 2.386661 AGTAAACCATGCCTCTCGTG 57.613 50.000 0.00 0.00 0.00 4.35
7673 20334 0.250901 AGCAAAACCGTGCCTCTCAT 60.251 50.000 0.00 0.00 46.14 2.90
7684 20345 2.489722 GTGCCTCTCATGGAAGGAAAAC 59.510 50.000 15.94 8.26 0.00 2.43
7685 20346 1.740025 GCCTCTCATGGAAGGAAAACG 59.260 52.381 15.94 0.00 0.00 3.60
7686 20347 2.615493 GCCTCTCATGGAAGGAAAACGA 60.615 50.000 15.94 0.00 0.00 3.85
7687 20348 3.674997 CCTCTCATGGAAGGAAAACGAA 58.325 45.455 8.21 0.00 0.00 3.85
7688 20349 4.072131 CCTCTCATGGAAGGAAAACGAAA 58.928 43.478 8.21 0.00 0.00 3.46
7689 20350 4.518970 CCTCTCATGGAAGGAAAACGAAAA 59.481 41.667 8.21 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.472691 TTCTCTGCAAACACGATCAAAG 57.527 40.909 0.00 0.00 0.00 2.77
55 56 6.816136 ACATCATCCGTTGTATCTTCATGTA 58.184 36.000 0.00 0.00 0.00 2.29
177 178 3.055021 TCCCCGTTTCATAATGTAGTGCA 60.055 43.478 0.00 0.00 0.00 4.57
369 2013 7.829706 TCTGTATGTCTATATTAGTCGCCATCT 59.170 37.037 0.00 0.00 0.00 2.90
419 2068 3.386237 GTGTCCTCGGCTGCCTCT 61.386 66.667 17.92 0.00 0.00 3.69
481 2131 3.753272 ACTGGAACGTGGAATCTTTCATG 59.247 43.478 0.00 0.00 0.00 3.07
483 2133 3.399330 GACTGGAACGTGGAATCTTTCA 58.601 45.455 0.00 0.00 0.00 2.69
501 2151 1.918957 CATTTCCCCAAGGAGAGGACT 59.081 52.381 0.00 0.00 45.19 3.85
590 2321 2.356135 GTGTCTTAATGGCACCATCGT 58.644 47.619 1.88 0.00 44.95 3.73
690 2499 9.248291 GTATATACGCTACTCCTATACTGTCTC 57.752 40.741 0.00 0.00 0.00 3.36
691 2500 8.980596 AGTATATACGCTACTCCTATACTGTCT 58.019 37.037 7.23 0.00 35.40 3.41
825 5213 0.250234 TCCTGAACGGGCTTCTCATG 59.750 55.000 0.00 0.00 0.00 3.07
859 5259 2.400399 TGTAGTACAAGTGAAGCGTGC 58.600 47.619 0.00 0.00 0.00 5.34
915 5372 2.158593 TGGGAGCTAGCTAGTAGGAGTG 60.159 54.545 19.38 0.00 0.00 3.51
916 5373 2.136863 TGGGAGCTAGCTAGTAGGAGT 58.863 52.381 19.38 0.00 0.00 3.85
917 5374 2.961531 TGGGAGCTAGCTAGTAGGAG 57.038 55.000 19.38 0.00 0.00 3.69
918 5375 2.514582 ACTTGGGAGCTAGCTAGTAGGA 59.485 50.000 19.38 1.06 0.00 2.94
919 5376 2.888414 GACTTGGGAGCTAGCTAGTAGG 59.112 54.545 19.38 10.74 0.00 3.18
920 5377 3.568007 CAGACTTGGGAGCTAGCTAGTAG 59.432 52.174 19.38 14.60 0.00 2.57
921 5378 3.053544 ACAGACTTGGGAGCTAGCTAGTA 60.054 47.826 19.38 3.52 0.00 1.82
922 5379 2.291930 ACAGACTTGGGAGCTAGCTAGT 60.292 50.000 19.38 17.45 0.00 2.57
1075 5544 2.806745 CGAAGACAAGGACAGGAAGCAA 60.807 50.000 0.00 0.00 0.00 3.91
1105 5574 1.067416 GCGGCATGTGATCGGAGTA 59.933 57.895 0.00 0.00 0.00 2.59
1251 5764 5.324409 TGGGCAAAGAGTTTGAGTAATGAT 58.676 37.500 3.56 0.00 43.26 2.45
1313 5828 3.698029 ATTTACTGTTCATGATGGCGC 57.302 42.857 0.00 0.00 0.00 6.53
1360 5879 8.017418 TGTTTGATGTCCTAAAGTTTTGGAAT 57.983 30.769 18.60 14.10 0.00 3.01
1402 5921 7.658921 TTTCTGGCTGAAACTTCGCAAGAAC 62.659 44.000 14.58 1.77 44.51 3.01
1412 5931 5.705441 TCGAATGTTATTTCTGGCTGAAACT 59.295 36.000 19.82 12.33 46.08 2.66
1423 5942 3.626217 GTGGACCCCTCGAATGTTATTTC 59.374 47.826 0.00 0.00 0.00 2.17
1455 5979 8.365210 GCACGTATAGTTTGAACAATGATTTTG 58.635 33.333 0.00 0.00 0.00 2.44
1456 5980 8.079203 TGCACGTATAGTTTGAACAATGATTTT 58.921 29.630 0.00 0.00 0.00 1.82
1457 5981 7.537306 GTGCACGTATAGTTTGAACAATGATTT 59.463 33.333 0.00 0.00 0.00 2.17
1458 5982 7.021196 GTGCACGTATAGTTTGAACAATGATT 58.979 34.615 0.00 0.00 0.00 2.57
1459 5983 6.371548 AGTGCACGTATAGTTTGAACAATGAT 59.628 34.615 12.01 0.00 0.00 2.45
1509 6086 1.065551 GCCACAAATAACATCCGAGGC 59.934 52.381 0.00 0.00 0.00 4.70
1530 6107 9.545105 AATATTTGATGTTCTTGCAAAGTTTCA 57.455 25.926 0.00 0.00 46.34 2.69
1594 6171 8.111224 CGTGAACGGTAAATTCAAAACAAAATT 58.889 29.630 0.00 0.00 37.80 1.82
1613 6190 0.389426 CCCTACACCCTTCGTGAACG 60.389 60.000 0.00 0.00 46.20 3.95
1619 6196 1.987855 TGCTCCCCTACACCCTTCG 60.988 63.158 0.00 0.00 0.00 3.79
1678 6325 2.763249 AGCGCCAAATCGATGAATTC 57.237 45.000 2.29 0.00 0.00 2.17
1864 6719 2.202932 CGTGATGCCGGAGAAGGG 60.203 66.667 5.05 0.00 0.00 3.95
2042 6911 5.136105 AGATCTCAATTGCCCTTGGATTAC 58.864 41.667 0.00 0.00 0.00 1.89
2051 6920 5.070313 ACTCTTAGAGAGATCTCAATTGCCC 59.930 44.000 24.39 4.77 45.07 5.36
2632 12041 1.733526 GGAAGCAACGCACCTTGTT 59.266 52.632 0.00 0.00 0.00 2.83
2766 12175 2.332654 GGTCGCCCATTCACGCTTT 61.333 57.895 0.00 0.00 0.00 3.51
2787 12196 2.344500 CCGGCGGTCCTGTTTACA 59.656 61.111 19.97 0.00 0.00 2.41
3153 12562 3.056749 CCCTCGGGTATATGTACTTGAGC 60.057 52.174 12.71 0.00 34.05 4.26
3400 12809 1.556911 ACCTCTGTTCGCATCAAGGAT 59.443 47.619 0.00 0.00 0.00 3.24
3427 12836 4.563184 GTGTATTCTGCGGAGAACAAGTAG 59.437 45.833 22.32 0.00 41.12 2.57
3446 12855 4.873827 GGACAAACTGACTGAAACTGTGTA 59.126 41.667 0.00 0.00 0.00 2.90
3543 12959 1.502231 CGTCTAATCCCGCCTTCATG 58.498 55.000 0.00 0.00 0.00 3.07
3549 12965 0.177373 AAGAACCGTCTAATCCCGCC 59.823 55.000 0.00 0.00 32.16 6.13
3561 12977 5.051907 CGTACCTGATTTTATCGAAGAACCG 60.052 44.000 0.00 0.00 43.58 4.44
3612 13028 1.180029 GAGATGCAAATGCCCAGTGT 58.820 50.000 2.46 0.00 41.18 3.55
3615 13031 2.097036 TGAAGAGATGCAAATGCCCAG 58.903 47.619 2.46 0.00 41.18 4.45
3634 13050 7.716998 AGAGCCACAACCTAATTATGAACTATG 59.283 37.037 0.00 0.00 0.00 2.23
3635 13051 7.806180 AGAGCCACAACCTAATTATGAACTAT 58.194 34.615 0.00 0.00 0.00 2.12
3636 13052 7.195374 AGAGCCACAACCTAATTATGAACTA 57.805 36.000 0.00 0.00 0.00 2.24
3637 13053 6.067217 AGAGCCACAACCTAATTATGAACT 57.933 37.500 0.00 0.00 0.00 3.01
3638 13054 6.759497 AAGAGCCACAACCTAATTATGAAC 57.241 37.500 0.00 0.00 0.00 3.18
3648 13064 0.468029 CCACCAAAGAGCCACAACCT 60.468 55.000 0.00 0.00 0.00 3.50
3658 13074 2.045561 TTTCTCGTTGCCACCAAAGA 57.954 45.000 0.00 0.00 37.16 2.52
3684 13101 7.906327 ACCAAATTCTAGTATTGCCAACAATT 58.094 30.769 0.00 0.00 44.21 2.32
3694 13111 8.448615 GTTTGTTCGCTACCAAATTCTAGTATT 58.551 33.333 0.00 0.00 0.00 1.89
3741 13391 5.261209 TGTTGGTACTGTACAACTAACGT 57.739 39.130 18.79 5.67 45.36 3.99
3824 14215 9.083080 GTTTGGTTATTTATGGCATGTTTCTAC 57.917 33.333 10.98 1.41 0.00 2.59
3864 14256 8.934697 ACTCTATCTCACATCTAGTCTTAGTCT 58.065 37.037 0.00 0.00 0.00 3.24
3902 14294 1.892474 GGCTGGCAAAACATAGAACCA 59.108 47.619 0.00 0.00 0.00 3.67
3906 14298 1.616725 CCAGGGCTGGCAAAACATAGA 60.617 52.381 2.88 0.00 44.73 1.98
3948 14340 6.668323 AGCGAATGGTTGCATATGTTAATAC 58.332 36.000 4.29 0.01 0.00 1.89
3962 14354 0.317770 CAACGTGCAAGCGAATGGTT 60.318 50.000 3.48 0.00 35.89 3.67
3963 14355 1.282570 CAACGTGCAAGCGAATGGT 59.717 52.632 3.48 0.00 35.59 3.55
3977 14426 3.963383 ACAAACTCTAAACTGGCAACG 57.037 42.857 0.00 0.00 42.51 4.10
3985 14434 5.006455 GGCTAATCGGCTACAAACTCTAAAC 59.994 44.000 0.00 0.00 34.85 2.01
3986 14435 5.114081 GGCTAATCGGCTACAAACTCTAAA 58.886 41.667 0.00 0.00 34.85 1.85
3987 14436 4.160814 TGGCTAATCGGCTACAAACTCTAA 59.839 41.667 0.00 0.00 39.32 2.10
3988 14437 3.702548 TGGCTAATCGGCTACAAACTCTA 59.297 43.478 0.00 0.00 39.32 2.43
3989 14438 2.500098 TGGCTAATCGGCTACAAACTCT 59.500 45.455 0.00 0.00 39.32 3.24
3990 14439 2.901249 TGGCTAATCGGCTACAAACTC 58.099 47.619 0.00 0.00 39.32 3.01
3991 14440 3.560636 ATGGCTAATCGGCTACAAACT 57.439 42.857 0.00 0.00 39.32 2.66
3992 14441 4.632538 AAATGGCTAATCGGCTACAAAC 57.367 40.909 0.00 0.00 39.32 2.93
4010 14459 9.332502 TGCGAGGTACATATGTTAATACAAAAT 57.667 29.630 14.77 0.00 37.91 1.82
4014 14463 7.982919 ACTTTGCGAGGTACATATGTTAATACA 59.017 33.333 14.77 3.57 38.95 2.29
4017 14466 8.418662 TCTACTTTGCGAGGTACATATGTTAAT 58.581 33.333 14.77 0.00 0.00 1.40
4018 14467 7.774134 TCTACTTTGCGAGGTACATATGTTAA 58.226 34.615 14.77 0.00 0.00 2.01
4020 14469 6.216801 TCTACTTTGCGAGGTACATATGTT 57.783 37.500 14.77 0.00 0.00 2.71
4021 14470 5.847111 TCTACTTTGCGAGGTACATATGT 57.153 39.130 13.93 13.93 0.00 2.29
4022 14471 6.366332 GGATTCTACTTTGCGAGGTACATATG 59.634 42.308 0.00 0.00 0.00 1.78
4023 14472 6.267928 AGGATTCTACTTTGCGAGGTACATAT 59.732 38.462 0.00 0.00 0.00 1.78
4051 14509 9.138062 CTTGCTTAGTAGATGCATTAGTCTATG 57.862 37.037 0.00 5.84 37.98 2.23
4072 14548 3.102972 TGAGGTAGAGATTCTGCTTGCT 58.897 45.455 0.00 0.00 29.49 3.91
4092 14568 5.221521 TGGATATCGGTGAAAGAGAGGAATG 60.222 44.000 0.00 0.00 0.00 2.67
4111 14587 9.905713 GCTAATGGAATCTATGGTTTATGGATA 57.094 33.333 0.00 0.00 36.12 2.59
4142 16185 9.996554 TGCTCCGAATTATATGAAATCTAAAGA 57.003 29.630 0.00 0.00 0.00 2.52
4166 16209 6.856426 GGCCGATTTCTTTTAACTATATGTGC 59.144 38.462 0.00 0.00 0.00 4.57
4174 16217 5.068591 ACTGTTTGGCCGATTTCTTTTAACT 59.931 36.000 0.00 0.00 0.00 2.24
4232 16275 0.744874 GCATGAAGCATGTGCCATCT 59.255 50.000 8.95 0.00 43.10 2.90
4272 16315 5.160607 TGTGTGGGTTCTATTAACCTCAG 57.839 43.478 6.85 0.00 40.15 3.35
4290 16336 5.767665 TGGCTGAAACATTACATACTTGTGT 59.232 36.000 0.00 0.00 36.53 3.72
4292 16338 5.415701 CCTGGCTGAAACATTACATACTTGT 59.584 40.000 0.00 0.00 39.98 3.16
4319 16365 6.358118 TGCAAATATGTCGGTCTACAAATC 57.642 37.500 0.00 0.00 32.02 2.17
4455 16671 2.351641 GCATCTGCACCGATGTCAAAAA 60.352 45.455 15.17 0.00 42.14 1.94
4456 16672 1.199789 GCATCTGCACCGATGTCAAAA 59.800 47.619 15.17 0.00 42.14 2.44
4457 16673 0.804364 GCATCTGCACCGATGTCAAA 59.196 50.000 15.17 0.00 42.14 2.69
4458 16674 2.470156 GCATCTGCACCGATGTCAA 58.530 52.632 15.17 0.00 42.14 3.18
4459 16675 4.206958 GCATCTGCACCGATGTCA 57.793 55.556 15.17 0.00 42.14 3.58
4469 16685 0.873054 ATATGAGCGCTTGCATCTGC 59.127 50.000 13.26 0.00 42.66 4.26
4470 16686 4.866486 TGTATATATGAGCGCTTGCATCTG 59.134 41.667 13.26 0.00 42.66 2.90
4471 16687 4.867047 GTGTATATATGAGCGCTTGCATCT 59.133 41.667 13.26 6.79 42.66 2.90
4472 16688 4.627035 TGTGTATATATGAGCGCTTGCATC 59.373 41.667 13.26 0.00 42.66 3.91
4473 16689 4.389992 GTGTGTATATATGAGCGCTTGCAT 59.610 41.667 13.26 14.41 42.66 3.96
4474 16690 3.740832 GTGTGTATATATGAGCGCTTGCA 59.259 43.478 13.26 6.25 42.66 4.08
4475 16691 3.740832 TGTGTGTATATATGAGCGCTTGC 59.259 43.478 13.26 0.00 39.58 4.01
4476 16692 6.586082 TGTATGTGTGTATATATGAGCGCTTG 59.414 38.462 13.26 0.00 0.00 4.01
4477 16693 6.586463 GTGTATGTGTGTATATATGAGCGCTT 59.414 38.462 13.26 0.00 0.00 4.68
4478 16694 6.071896 AGTGTATGTGTGTATATATGAGCGCT 60.072 38.462 11.27 11.27 0.00 5.92
4479 16695 6.093404 AGTGTATGTGTGTATATATGAGCGC 58.907 40.000 0.00 0.00 0.00 5.92
4480 16696 7.305474 TGAGTGTATGTGTGTATATATGAGCG 58.695 38.462 0.00 0.00 0.00 5.03
4481 16697 9.295214 GATGAGTGTATGTGTGTATATATGAGC 57.705 37.037 0.00 0.00 0.00 4.26
4482 16698 9.495754 CGATGAGTGTATGTGTGTATATATGAG 57.504 37.037 0.00 0.00 0.00 2.90
4483 16699 7.968405 GCGATGAGTGTATGTGTGTATATATGA 59.032 37.037 0.00 0.00 0.00 2.15
4484 16700 7.970614 AGCGATGAGTGTATGTGTGTATATATG 59.029 37.037 0.00 0.00 0.00 1.78
4485 16701 8.056407 AGCGATGAGTGTATGTGTGTATATAT 57.944 34.615 0.00 0.00 0.00 0.86
4486 16702 7.448748 AGCGATGAGTGTATGTGTGTATATA 57.551 36.000 0.00 0.00 0.00 0.86
4487 16703 6.332735 AGCGATGAGTGTATGTGTGTATAT 57.667 37.500 0.00 0.00 0.00 0.86
4488 16704 5.767816 AGCGATGAGTGTATGTGTGTATA 57.232 39.130 0.00 0.00 0.00 1.47
4489 16705 4.655762 AGCGATGAGTGTATGTGTGTAT 57.344 40.909 0.00 0.00 0.00 2.29
4490 16706 5.298276 TCATAGCGATGAGTGTATGTGTGTA 59.702 40.000 5.29 0.00 37.15 2.90
4491 16707 4.097892 TCATAGCGATGAGTGTATGTGTGT 59.902 41.667 5.29 0.00 37.15 3.72
4492 16708 4.610945 TCATAGCGATGAGTGTATGTGTG 58.389 43.478 5.29 0.00 37.15 3.82
4493 16709 4.918810 TCATAGCGATGAGTGTATGTGT 57.081 40.909 5.29 0.00 37.15 3.72
4503 16719 3.234353 AGACATTCCCTCATAGCGATGA 58.766 45.455 9.29 9.29 39.88 2.92
4504 16720 3.583806 GAGACATTCCCTCATAGCGATG 58.416 50.000 0.00 0.00 0.00 3.84
4505 16721 2.564947 GGAGACATTCCCTCATAGCGAT 59.435 50.000 0.00 0.00 40.37 4.58
4506 16722 1.964223 GGAGACATTCCCTCATAGCGA 59.036 52.381 0.00 0.00 40.37 4.93
4507 16723 2.447244 GGAGACATTCCCTCATAGCG 57.553 55.000 0.00 0.00 40.37 4.26
4527 16743 3.499737 GATGCGCGTTCAGTGGGG 61.500 66.667 8.43 0.00 0.00 4.96
4528 16744 3.499737 GGATGCGCGTTCAGTGGG 61.500 66.667 8.43 0.00 0.00 4.61
4529 16745 3.499737 GGGATGCGCGTTCAGTGG 61.500 66.667 10.74 0.00 0.00 4.00
4530 16746 3.499737 GGGGATGCGCGTTCAGTG 61.500 66.667 10.74 0.00 0.00 3.66
4532 16748 4.812476 TCGGGGATGCGCGTTCAG 62.812 66.667 22.25 3.13 0.00 3.02
4533 16749 3.885538 TTTCGGGGATGCGCGTTCA 62.886 57.895 22.25 6.26 0.00 3.18
4534 16750 1.988834 ATTTTCGGGGATGCGCGTTC 61.989 55.000 22.25 0.00 0.00 3.95
4535 16751 1.988834 GATTTTCGGGGATGCGCGTT 61.989 55.000 22.25 7.15 0.00 4.84
4536 16752 2.437716 ATTTTCGGGGATGCGCGT 60.438 55.556 22.25 0.00 0.00 6.01
4537 16753 2.327940 GATTTTCGGGGATGCGCG 59.672 61.111 17.64 17.64 0.00 6.86
4538 16754 1.823899 AGGATTTTCGGGGATGCGC 60.824 57.895 0.00 0.00 0.00 6.09
4539 16755 0.463654 TCAGGATTTTCGGGGATGCG 60.464 55.000 0.00 0.00 0.00 4.73
4540 16756 1.762708 TTCAGGATTTTCGGGGATGC 58.237 50.000 0.00 0.00 0.00 3.91
4541 16757 6.463995 TTTATTTCAGGATTTTCGGGGATG 57.536 37.500 0.00 0.00 0.00 3.51
4542 16758 6.267699 GGATTTATTTCAGGATTTTCGGGGAT 59.732 38.462 0.00 0.00 0.00 3.85
4543 16759 5.596772 GGATTTATTTCAGGATTTTCGGGGA 59.403 40.000 0.00 0.00 0.00 4.81
4544 16760 5.362430 TGGATTTATTTCAGGATTTTCGGGG 59.638 40.000 0.00 0.00 0.00 5.73
4545 16761 6.463995 TGGATTTATTTCAGGATTTTCGGG 57.536 37.500 0.00 0.00 0.00 5.14
4554 16770 5.750067 CGCATTTTCCTGGATTTATTTCAGG 59.250 40.000 0.00 0.00 46.91 3.86
4555 16771 6.563422 TCGCATTTTCCTGGATTTATTTCAG 58.437 36.000 0.00 0.00 0.00 3.02
4556 16772 6.522625 TCGCATTTTCCTGGATTTATTTCA 57.477 33.333 0.00 0.00 0.00 2.69
4557 16773 5.460091 GCTCGCATTTTCCTGGATTTATTTC 59.540 40.000 0.00 0.00 0.00 2.17
4558 16774 5.105392 TGCTCGCATTTTCCTGGATTTATTT 60.105 36.000 0.00 0.00 0.00 1.40
4559 16775 4.402155 TGCTCGCATTTTCCTGGATTTATT 59.598 37.500 0.00 0.00 0.00 1.40
4560 16776 3.953612 TGCTCGCATTTTCCTGGATTTAT 59.046 39.130 0.00 0.00 0.00 1.40
4561 16777 3.128589 GTGCTCGCATTTTCCTGGATTTA 59.871 43.478 0.00 0.00 0.00 1.40
4562 16778 2.094545 GTGCTCGCATTTTCCTGGATTT 60.095 45.455 0.00 0.00 0.00 2.17
4563 16779 1.474077 GTGCTCGCATTTTCCTGGATT 59.526 47.619 0.00 0.00 0.00 3.01
4564 16780 1.098050 GTGCTCGCATTTTCCTGGAT 58.902 50.000 0.00 0.00 0.00 3.41
4565 16781 0.960364 GGTGCTCGCATTTTCCTGGA 60.960 55.000 0.00 0.00 0.00 3.86
4566 16782 1.243342 TGGTGCTCGCATTTTCCTGG 61.243 55.000 0.00 0.00 0.00 4.45
4567 16783 0.169672 CTGGTGCTCGCATTTTCCTG 59.830 55.000 0.00 0.00 0.00 3.86
4568 16784 0.962356 CCTGGTGCTCGCATTTTCCT 60.962 55.000 0.00 0.00 0.00 3.36
4569 16785 0.960364 TCCTGGTGCTCGCATTTTCC 60.960 55.000 0.00 0.00 0.00 3.13
4570 16786 0.169009 GTCCTGGTGCTCGCATTTTC 59.831 55.000 0.00 0.00 0.00 2.29
4571 16787 0.250901 AGTCCTGGTGCTCGCATTTT 60.251 50.000 0.00 0.00 0.00 1.82
4572 16788 0.250901 AAGTCCTGGTGCTCGCATTT 60.251 50.000 0.00 0.00 0.00 2.32
4573 16789 0.957395 CAAGTCCTGGTGCTCGCATT 60.957 55.000 0.00 0.00 0.00 3.56
4574 16790 1.376424 CAAGTCCTGGTGCTCGCAT 60.376 57.895 0.00 0.00 0.00 4.73
4575 16791 2.031012 CAAGTCCTGGTGCTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
4576 16792 2.743928 CCAAGTCCTGGTGCTCGC 60.744 66.667 0.00 0.00 40.78 5.03
4577 16793 1.374758 GTCCAAGTCCTGGTGCTCG 60.375 63.158 0.00 0.00 46.51 5.03
4578 16794 1.003233 GGTCCAAGTCCTGGTGCTC 60.003 63.158 0.00 0.00 46.51 4.26
4579 16795 1.136329 ATGGTCCAAGTCCTGGTGCT 61.136 55.000 0.00 0.00 46.51 4.40
4580 16796 0.962356 CATGGTCCAAGTCCTGGTGC 60.962 60.000 0.00 0.00 46.51 5.01
4581 16797 0.322816 CCATGGTCCAAGTCCTGGTG 60.323 60.000 2.57 0.00 46.51 4.17
4582 16798 0.772124 ACCATGGTCCAAGTCCTGGT 60.772 55.000 13.00 8.10 46.51 4.00
4584 16800 0.322816 CCACCATGGTCCAAGTCCTG 60.323 60.000 16.53 0.00 31.35 3.86
4585 16801 1.500783 CCCACCATGGTCCAAGTCCT 61.501 60.000 16.53 0.00 35.17 3.85
4586 16802 1.000896 CCCACCATGGTCCAAGTCC 60.001 63.158 16.53 0.00 35.17 3.85
4587 16803 1.678970 GCCCACCATGGTCCAAGTC 60.679 63.158 16.53 0.00 35.17 3.01
4588 16804 0.844661 TAGCCCACCATGGTCCAAGT 60.845 55.000 16.53 1.22 35.17 3.16
4589 16805 0.107017 CTAGCCCACCATGGTCCAAG 60.107 60.000 16.53 3.30 35.17 3.61
4590 16806 1.570857 CCTAGCCCACCATGGTCCAA 61.571 60.000 16.53 0.00 35.17 3.53
4591 16807 2.000701 CCTAGCCCACCATGGTCCA 61.001 63.158 16.53 0.00 35.17 4.02
4592 16808 2.757124 CCCTAGCCCACCATGGTCC 61.757 68.421 16.53 6.51 35.17 4.46
4593 16809 1.062488 ATCCCTAGCCCACCATGGTC 61.062 60.000 16.53 3.82 35.17 4.02
4594 16810 0.270699 TATCCCTAGCCCACCATGGT 59.729 55.000 13.00 13.00 35.17 3.55
4595 16811 0.693049 GTATCCCTAGCCCACCATGG 59.307 60.000 11.19 11.19 37.25 3.66
4596 16812 0.693049 GGTATCCCTAGCCCACCATG 59.307 60.000 0.00 0.00 0.00 3.66
4597 16813 0.270699 TGGTATCCCTAGCCCACCAT 59.729 55.000 0.00 0.00 34.40 3.55
4598 16814 0.693092 GTGGTATCCCTAGCCCACCA 60.693 60.000 0.00 0.00 41.20 4.17
4599 16815 0.400093 AGTGGTATCCCTAGCCCACC 60.400 60.000 4.15 3.28 46.84 4.61
4600 16816 0.759346 CAGTGGTATCCCTAGCCCAC 59.241 60.000 0.00 0.00 46.17 4.61
4601 16817 0.341961 ACAGTGGTATCCCTAGCCCA 59.658 55.000 0.00 0.00 0.00 5.36
4602 16818 1.049402 GACAGTGGTATCCCTAGCCC 58.951 60.000 0.00 0.00 0.00 5.19
4603 16819 1.049402 GGACAGTGGTATCCCTAGCC 58.951 60.000 0.00 0.00 0.00 3.93
4604 16820 1.964933 GAGGACAGTGGTATCCCTAGC 59.035 57.143 0.00 0.00 35.38 3.42
4605 16821 2.178106 AGGAGGACAGTGGTATCCCTAG 59.822 54.545 0.00 0.00 34.82 3.02
4606 16822 2.224077 AGGAGGACAGTGGTATCCCTA 58.776 52.381 0.00 0.00 34.82 3.53
4607 16823 1.019650 AGGAGGACAGTGGTATCCCT 58.980 55.000 0.00 0.00 34.82 4.20
4608 16824 2.599677 CTAGGAGGACAGTGGTATCCC 58.400 57.143 0.00 0.00 34.82 3.85
4609 16825 1.964933 GCTAGGAGGACAGTGGTATCC 59.035 57.143 0.00 0.00 34.60 2.59
4610 16826 1.964933 GGCTAGGAGGACAGTGGTATC 59.035 57.143 0.00 0.00 0.00 2.24
4611 16827 1.291033 TGGCTAGGAGGACAGTGGTAT 59.709 52.381 0.00 0.00 0.00 2.73
4612 16828 0.708209 TGGCTAGGAGGACAGTGGTA 59.292 55.000 0.00 0.00 0.00 3.25
4613 16829 0.043334 ATGGCTAGGAGGACAGTGGT 59.957 55.000 0.00 0.00 0.00 4.16
4614 16830 0.755686 GATGGCTAGGAGGACAGTGG 59.244 60.000 0.00 0.00 0.00 4.00
4615 16831 0.755686 GGATGGCTAGGAGGACAGTG 59.244 60.000 0.00 0.00 0.00 3.66
4616 16832 0.339859 TGGATGGCTAGGAGGACAGT 59.660 55.000 0.00 0.00 0.00 3.55
4617 16833 1.139853 GTTGGATGGCTAGGAGGACAG 59.860 57.143 0.00 0.00 0.00 3.51
4618 16834 1.204146 GTTGGATGGCTAGGAGGACA 58.796 55.000 0.00 0.00 0.00 4.02
4619 16835 0.470341 GGTTGGATGGCTAGGAGGAC 59.530 60.000 0.00 0.00 0.00 3.85
4620 16836 0.044092 TGGTTGGATGGCTAGGAGGA 59.956 55.000 0.00 0.00 0.00 3.71
4621 16837 0.181350 GTGGTTGGATGGCTAGGAGG 59.819 60.000 0.00 0.00 0.00 4.30
4622 16838 0.911769 TGTGGTTGGATGGCTAGGAG 59.088 55.000 0.00 0.00 0.00 3.69
4623 16839 1.212688 CATGTGGTTGGATGGCTAGGA 59.787 52.381 0.00 0.00 0.00 2.94
4624 16840 1.064463 ACATGTGGTTGGATGGCTAGG 60.064 52.381 0.00 0.00 0.00 3.02
4625 16841 2.425143 ACATGTGGTTGGATGGCTAG 57.575 50.000 0.00 0.00 0.00 3.42
4626 16842 2.897271 AACATGTGGTTGGATGGCTA 57.103 45.000 0.00 0.00 38.60 3.93
4627 16843 3.772096 AACATGTGGTTGGATGGCT 57.228 47.368 0.00 0.00 38.60 4.75
4661 16877 9.862371 TTATTGTATTTATTTCCGCACAACAAT 57.138 25.926 0.00 0.00 38.29 2.71
4708 17027 8.012957 TGAAGTTTTTGTATTACACATTGGGT 57.987 30.769 0.00 0.00 36.90 4.51
4724 17045 7.613411 CCCCATCTTTATCTCTCTGAAGTTTTT 59.387 37.037 0.00 0.00 0.00 1.94
4811 17132 4.257731 TGTTGTAGTGTGTGCTCTGAAAA 58.742 39.130 0.00 0.00 0.00 2.29
4816 17137 3.612717 CGAGATGTTGTAGTGTGTGCTCT 60.613 47.826 0.00 0.00 0.00 4.09
4827 17148 2.829720 ACTGTTAGCCCGAGATGTTGTA 59.170 45.455 0.00 0.00 0.00 2.41
4832 17153 6.513180 TCTTATTTACTGTTAGCCCGAGATG 58.487 40.000 0.00 0.00 0.00 2.90
4836 17157 6.938507 TCTTTCTTATTTACTGTTAGCCCGA 58.061 36.000 0.00 0.00 0.00 5.14
4840 17161 9.840427 TTTGCATCTTTCTTATTTACTGTTAGC 57.160 29.630 0.00 0.00 0.00 3.09
4861 17182 7.621428 TCATTTTTCTTTCACCATTTTTGCA 57.379 28.000 0.00 0.00 0.00 4.08
4931 17252 8.908903 ACAACATATGTTTTCTCTTGGTAAACA 58.091 29.630 18.50 0.00 40.06 2.83
4932 17253 9.180678 CACAACATATGTTTTCTCTTGGTAAAC 57.819 33.333 18.50 0.00 41.46 2.01
4938 17263 9.817365 CTACTTCACAACATATGTTTTCTCTTG 57.183 33.333 18.50 8.94 41.46 3.02
4943 17268 8.094798 TCACCTACTTCACAACATATGTTTTC 57.905 34.615 18.50 0.00 41.46 2.29
4945 17270 7.936847 TCTTCACCTACTTCACAACATATGTTT 59.063 33.333 18.50 5.94 41.46 2.83
4995 17320 5.281727 GGCAAAACAGAAGGTTCTAAACAG 58.718 41.667 0.00 0.00 39.29 3.16
5006 17333 1.338020 GTGGTCTGGGCAAAACAGAAG 59.662 52.381 0.00 0.00 45.66 2.85
5009 17336 1.110442 TTGTGGTCTGGGCAAAACAG 58.890 50.000 0.00 0.00 37.30 3.16
5010 17337 0.820871 GTTGTGGTCTGGGCAAAACA 59.179 50.000 0.00 0.00 0.00 2.83
5011 17338 0.820871 TGTTGTGGTCTGGGCAAAAC 59.179 50.000 0.00 0.00 0.00 2.43
5023 17350 6.979817 TCATGAACAAAAGAAAGATGTTGTGG 59.020 34.615 0.00 0.00 37.41 4.17
5054 17381 8.169977 CATGTTCAGGCCTTATACATGTTTAT 57.830 34.615 27.91 8.20 40.54 1.40
5121 17451 7.547722 AGTGTTTTGGAGGTGAATTGTAAAAAC 59.452 33.333 0.00 0.00 37.00 2.43
5129 17459 5.061721 AGGTAGTGTTTTGGAGGTGAATT 57.938 39.130 0.00 0.00 0.00 2.17
5170 17504 9.639563 TGGGTTCATACATGTATTGTGATAAAT 57.360 29.630 15.85 0.00 39.48 1.40
5172 17506 9.065798 CATGGGTTCATACATGTATTGTGATAA 57.934 33.333 15.85 0.61 39.48 1.75
5173 17507 7.174772 GCATGGGTTCATACATGTATTGTGATA 59.825 37.037 15.85 2.81 44.74 2.15
5174 17508 6.016024 GCATGGGTTCATACATGTATTGTGAT 60.016 38.462 15.85 1.60 44.74 3.06
5178 17512 5.522456 GTGCATGGGTTCATACATGTATTG 58.478 41.667 15.85 10.72 44.74 1.90
5196 17530 7.212976 ACTCTATTAGTCATCAATTCGTGCAT 58.787 34.615 0.00 0.00 30.33 3.96
5260 17753 7.715657 TGCACTCTTATGAAACTTTCAATTGT 58.284 30.769 8.28 1.93 43.95 2.71
5270 17763 8.328146 GGTTTTCTTTTTGCACTCTTATGAAAC 58.672 33.333 0.00 0.00 0.00 2.78
5275 17768 9.131791 TCTTAGGTTTTCTTTTTGCACTCTTAT 57.868 29.630 0.00 0.00 0.00 1.73
5331 17824 9.482627 GAACATCTTATATTTGTGAGTCTAGGG 57.517 37.037 0.00 0.00 0.00 3.53
5468 17994 5.686753 TGCACAAAAGAGTTACTCCCTTTA 58.313 37.500 8.96 0.00 30.75 1.85
5487 18013 2.289820 CTGCCACATCTGTATCATGCAC 59.710 50.000 0.00 0.00 0.00 4.57
5526 18052 0.875908 TCACTGCTGAAGTCGCACAC 60.876 55.000 0.00 0.00 36.83 3.82
5528 18054 0.233332 GTTCACTGCTGAAGTCGCAC 59.767 55.000 0.00 0.00 37.06 5.34
5573 18099 1.520564 GCCATGCATACGGACGTCA 60.521 57.895 18.91 0.00 0.00 4.35
5618 18144 1.401670 CGGTAGCTATCATCAGACGCC 60.402 57.143 4.57 0.00 0.00 5.68
5630 18156 1.040646 CATTCTCTGGCCGGTAGCTA 58.959 55.000 12.43 0.00 43.05 3.32
5702 18228 1.457831 GGTCACCTCCCGGATAGCT 60.458 63.158 0.73 0.00 0.00 3.32
5855 18381 2.278596 CCATCGTACTCCCGCACG 60.279 66.667 0.00 0.00 39.48 5.34
5873 18399 3.858868 GACCACAAGCTGGACGCGA 62.859 63.158 15.93 0.00 43.95 5.87
6712 19238 2.098117 GCTTCTCGGCAGCATTATGTTT 59.902 45.455 0.00 0.00 37.22 2.83
6716 19245 0.104855 TCGCTTCTCGGCAGCATTAT 59.895 50.000 0.00 0.00 37.07 1.28
6755 19284 2.176364 CCTCCTTGACCCCATCATTGAT 59.824 50.000 0.00 0.00 37.11 2.57
6767 19296 0.747255 TGATAGCGCTCCTCCTTGAC 59.253 55.000 16.34 0.00 0.00 3.18
6775 19304 0.247736 CATAGGGGTGATAGCGCTCC 59.752 60.000 16.34 9.18 45.95 4.70
6781 19310 4.630644 ATCAGCAACATAGGGGTGATAG 57.369 45.455 4.69 0.00 46.86 2.08
6838 19367 7.742089 CACAAGTAGACTCATGTTCGAAAATTC 59.258 37.037 0.00 0.00 0.00 2.17
6872 19401 2.805671 CGAGGTGTGCACTATTGAAACA 59.194 45.455 19.41 0.00 0.00 2.83
6917 19446 9.592720 CCTTTTCCGTTAAAATAAAATTGCTTG 57.407 29.630 0.00 0.00 36.49 4.01
6918 19447 9.549078 TCCTTTTCCGTTAAAATAAAATTGCTT 57.451 25.926 0.00 0.00 36.49 3.91
6919 19448 9.549078 TTCCTTTTCCGTTAAAATAAAATTGCT 57.451 25.926 0.00 0.00 36.49 3.91
6920 19449 9.805966 CTTCCTTTTCCGTTAAAATAAAATTGC 57.194 29.630 0.00 0.00 36.49 3.56
6965 19494 9.598517 TCATTGCTTGAATTTTGTAGTTCTTTT 57.401 25.926 0.00 0.00 0.00 2.27
6966 19495 9.252962 CTCATTGCTTGAATTTTGTAGTTCTTT 57.747 29.630 0.00 0.00 32.78 2.52
6967 19496 8.632679 TCTCATTGCTTGAATTTTGTAGTTCTT 58.367 29.630 0.00 0.00 32.78 2.52
6968 19497 8.169977 TCTCATTGCTTGAATTTTGTAGTTCT 57.830 30.769 0.00 0.00 32.78 3.01
6969 19498 8.801715 TTCTCATTGCTTGAATTTTGTAGTTC 57.198 30.769 0.00 0.00 32.78 3.01
6970 19499 9.252962 CTTTCTCATTGCTTGAATTTTGTAGTT 57.747 29.630 0.00 0.00 32.78 2.24
6971 19500 7.383300 GCTTTCTCATTGCTTGAATTTTGTAGT 59.617 33.333 0.00 0.00 32.78 2.73
6972 19501 7.383029 TGCTTTCTCATTGCTTGAATTTTGTAG 59.617 33.333 0.00 0.00 32.78 2.74
6973 19502 7.169645 GTGCTTTCTCATTGCTTGAATTTTGTA 59.830 33.333 0.00 0.00 32.78 2.41
6974 19503 6.018507 GTGCTTTCTCATTGCTTGAATTTTGT 60.019 34.615 0.00 0.00 32.78 2.83
6975 19504 6.360329 GTGCTTTCTCATTGCTTGAATTTTG 58.640 36.000 0.00 0.00 32.78 2.44
6976 19505 5.467735 GGTGCTTTCTCATTGCTTGAATTTT 59.532 36.000 0.00 0.00 32.78 1.82
6977 19506 4.992951 GGTGCTTTCTCATTGCTTGAATTT 59.007 37.500 0.00 0.00 32.78 1.82
6978 19507 4.282703 AGGTGCTTTCTCATTGCTTGAATT 59.717 37.500 0.00 0.00 32.78 2.17
6979 19508 3.830755 AGGTGCTTTCTCATTGCTTGAAT 59.169 39.130 0.00 0.00 32.78 2.57
6980 19509 3.225104 AGGTGCTTTCTCATTGCTTGAA 58.775 40.909 0.00 0.00 32.78 2.69
6981 19510 2.816087 GAGGTGCTTTCTCATTGCTTGA 59.184 45.455 0.00 0.00 0.00 3.02
6982 19511 2.094854 GGAGGTGCTTTCTCATTGCTTG 60.095 50.000 0.00 0.00 33.18 4.01
6983 19512 2.165998 GGAGGTGCTTTCTCATTGCTT 58.834 47.619 0.00 0.00 33.18 3.91
6984 19513 1.353694 AGGAGGTGCTTTCTCATTGCT 59.646 47.619 0.00 0.00 33.18 3.91
6985 19514 1.831580 AGGAGGTGCTTTCTCATTGC 58.168 50.000 0.00 0.00 33.18 3.56
6986 19515 5.964958 TTTTAGGAGGTGCTTTCTCATTG 57.035 39.130 0.00 0.00 33.18 2.82
7051 19688 4.558226 TGTTCAATGCACTAGGTCTCAT 57.442 40.909 0.00 0.00 0.00 2.90
7067 19704 4.873827 GGATAGCCTCGTTATTGTTGTTCA 59.126 41.667 0.00 0.00 0.00 3.18
7071 19708 5.465724 GGTTAGGATAGCCTCGTTATTGTTG 59.534 44.000 0.73 0.00 45.54 3.33
7079 19716 2.154567 TGTGGTTAGGATAGCCTCGT 57.845 50.000 0.73 0.00 45.54 4.18
7081 19718 3.039011 TCCTTGTGGTTAGGATAGCCTC 58.961 50.000 0.73 0.00 43.15 4.70
7166 19810 1.745232 TGAGCTTTTCCGTGTGTGTT 58.255 45.000 0.00 0.00 0.00 3.32
7175 19819 1.066143 TGGACGGAGATGAGCTTTTCC 60.066 52.381 0.00 0.00 0.00 3.13
7254 19903 6.573680 CGGGAGTGATCTTTAAAAGGAGTACA 60.574 42.308 0.00 0.00 0.00 2.90
7260 19909 2.683362 GGCGGGAGTGATCTTTAAAAGG 59.317 50.000 0.00 0.00 0.00 3.11
7264 19913 1.485066 GGAGGCGGGAGTGATCTTTAA 59.515 52.381 0.00 0.00 0.00 1.52
7265 19914 1.120530 GGAGGCGGGAGTGATCTTTA 58.879 55.000 0.00 0.00 0.00 1.85
7286 19935 1.270571 TGCATCACTTGTCGCAACCTA 60.271 47.619 0.00 0.00 0.00 3.08
7327 19976 5.930837 AAAATGGAAAACTCACAGGTTGA 57.069 34.783 0.00 0.00 0.00 3.18
7353 20002 6.920569 AACGCTTTGAATAAACGGATCTAT 57.079 33.333 0.00 0.00 0.00 1.98
7378 20027 8.095169 AGATTTAGACACACGGTTTAAGAGATT 58.905 33.333 0.00 0.00 28.95 2.40
7398 20047 6.642707 ATGGTGAAAACGGTTTGAGATTTA 57.357 33.333 1.45 0.00 0.00 1.40
7424 20073 4.793201 TGAAGATCTCGACCTGAGGAATA 58.207 43.478 4.99 0.00 45.32 1.75
7450 20099 6.038161 CCAAAACCTATCAACATGCGATCTAA 59.962 38.462 1.66 0.00 0.00 2.10
7538 20198 2.042831 GCTTCCGCAAGAGGCACAT 61.043 57.895 0.00 0.00 46.54 3.21
7548 20208 1.580942 GCACAGATTTGCTTCCGCA 59.419 52.632 0.00 0.00 46.24 5.69
7585 20245 0.984230 TTTCCTTCCACGAGAGGCAT 59.016 50.000 0.00 0.00 0.00 4.40
7608 20269 3.298499 TCTCGAAAACAAAAACAAACGCG 59.702 39.130 3.53 3.53 0.00 6.01
7609 20270 4.774778 GCTCTCGAAAACAAAAACAAACGC 60.775 41.667 0.00 0.00 0.00 4.84
7610 20271 4.259253 GGCTCTCGAAAACAAAAACAAACG 60.259 41.667 0.00 0.00 0.00 3.60
7611 20272 4.623595 TGGCTCTCGAAAACAAAAACAAAC 59.376 37.500 0.00 0.00 0.00 2.93
7615 20276 2.781646 CGTGGCTCTCGAAAACAAAAAC 59.218 45.455 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.