Multiple sequence alignment - TraesCS6D01G406300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G406300 chr6D 100.000 2011 0 0 1 2011 472827118 472829128 0.000000e+00 3714.0
1 TraesCS6D01G406300 chr6D 86.445 841 83 14 953 1768 472754828 472753994 0.000000e+00 893.0
2 TraesCS6D01G406300 chr6D 100.000 251 0 0 2266 2516 472829383 472829633 4.900000e-127 464.0
3 TraesCS6D01G406300 chr6B 88.670 1068 92 13 953 1991 717953808 717954875 0.000000e+00 1275.0
4 TraesCS6D01G406300 chr6B 86.754 838 83 10 953 1768 717904210 717903379 0.000000e+00 907.0
5 TraesCS6D01G406300 chr6B 83.333 288 23 14 660 945 717952990 717953254 2.500000e-60 243.0
6 TraesCS6D01G406300 chr6B 100.000 40 0 0 166 205 717952056 717952095 9.650000e-10 75.0
7 TraesCS6D01G406300 chr7D 86.290 868 92 10 954 1799 20941637 20940775 0.000000e+00 918.0
8 TraesCS6D01G406300 chr7D 92.000 50 3 1 2268 2317 469224459 469224507 4.490000e-08 69.4
9 TraesCS6D01G406300 chr1A 82.979 235 31 2 1170 1404 10490268 10490043 1.180000e-48 204.0
10 TraesCS6D01G406300 chr6A 92.000 50 2 2 2268 2317 578882065 578882112 4.490000e-08 69.4
11 TraesCS6D01G406300 chr4A 90.741 54 1 4 2267 2318 86172172 86172121 4.490000e-08 69.4
12 TraesCS6D01G406300 chr3D 90.909 55 0 5 2268 2319 299906337 299906389 4.490000e-08 69.4
13 TraesCS6D01G406300 chr2A 93.750 48 0 3 2268 2314 384997654 384997699 4.490000e-08 69.4
14 TraesCS6D01G406300 chr2A 93.750 48 0 3 2268 2314 625087312 625087357 4.490000e-08 69.4
15 TraesCS6D01G406300 chr5D 92.000 50 1 3 2267 2315 12308655 12308608 1.620000e-07 67.6
16 TraesCS6D01G406300 chr2B 90.566 53 2 3 2268 2320 559172314 559172363 1.620000e-07 67.6
17 TraesCS6D01G406300 chr2D 87.931 58 2 5 2266 2320 238156130 238156185 2.090000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G406300 chr6D 472827118 472829633 2515 False 2089 3714 100.000000 1 2516 2 chr6D.!!$F1 2515
1 TraesCS6D01G406300 chr6D 472753994 472754828 834 True 893 893 86.445000 953 1768 1 chr6D.!!$R1 815
2 TraesCS6D01G406300 chr6B 717903379 717904210 831 True 907 907 86.754000 953 1768 1 chr6B.!!$R1 815
3 TraesCS6D01G406300 chr6B 717952056 717954875 2819 False 531 1275 90.667667 166 1991 3 chr6B.!!$F1 1825
4 TraesCS6D01G406300 chr7D 20940775 20941637 862 True 918 918 86.290000 954 1799 1 chr7D.!!$R1 845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 909 0.030908 CGATAGGTCTCACGCCCTTC 59.969 60.0 0.0 0.0 32.08 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 3364 0.034198 GCCTAGGCTAAGCTAGGTGC 59.966 60.0 27.17 0.0 43.38 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.882876 CAGACAGCTGCATTGGGC 59.117 61.111 15.27 0.00 45.13 5.36
45 46 4.666176 CGCAGCTAAATAAAGTGCATAACG 59.334 41.667 0.00 0.00 33.59 3.18
46 47 5.569413 GCAGCTAAATAAAGTGCATAACGT 58.431 37.500 0.00 0.00 34.18 3.99
47 48 5.452302 GCAGCTAAATAAAGTGCATAACGTG 59.548 40.000 0.00 0.00 34.18 4.49
48 49 5.965334 CAGCTAAATAAAGTGCATAACGTGG 59.035 40.000 0.00 0.00 0.00 4.94
49 50 5.065988 AGCTAAATAAAGTGCATAACGTGGG 59.934 40.000 0.00 0.00 0.00 4.61
50 51 4.712122 AAATAAAGTGCATAACGTGGGG 57.288 40.909 0.00 0.00 0.00 4.96
51 52 2.863132 TAAAGTGCATAACGTGGGGT 57.137 45.000 0.00 0.00 0.00 4.95
52 53 1.243902 AAAGTGCATAACGTGGGGTG 58.756 50.000 0.00 0.00 0.00 4.61
53 54 0.109723 AAGTGCATAACGTGGGGTGT 59.890 50.000 0.00 0.00 0.00 4.16
54 55 0.321298 AGTGCATAACGTGGGGTGTC 60.321 55.000 0.00 0.00 0.00 3.67
55 56 0.604243 GTGCATAACGTGGGGTGTCA 60.604 55.000 0.00 0.00 0.00 3.58
56 57 0.321210 TGCATAACGTGGGGTGTCAG 60.321 55.000 0.00 0.00 0.00 3.51
57 58 1.024579 GCATAACGTGGGGTGTCAGG 61.025 60.000 0.00 0.00 0.00 3.86
58 59 0.323629 CATAACGTGGGGTGTCAGGT 59.676 55.000 0.00 0.00 37.35 4.00
59 60 1.061546 ATAACGTGGGGTGTCAGGTT 58.938 50.000 0.00 7.80 44.53 3.50
60 61 0.838608 TAACGTGGGGTGTCAGGTTT 59.161 50.000 7.96 0.00 41.20 3.27
61 62 0.838608 AACGTGGGGTGTCAGGTTTA 59.161 50.000 0.00 0.00 41.20 2.01
62 63 0.838608 ACGTGGGGTGTCAGGTTTAA 59.161 50.000 0.00 0.00 32.65 1.52
63 64 1.422402 ACGTGGGGTGTCAGGTTTAAT 59.578 47.619 0.00 0.00 32.65 1.40
64 65 2.158579 ACGTGGGGTGTCAGGTTTAATT 60.159 45.455 0.00 0.00 32.65 1.40
65 66 3.072768 ACGTGGGGTGTCAGGTTTAATTA 59.927 43.478 0.00 0.00 32.65 1.40
66 67 3.437741 CGTGGGGTGTCAGGTTTAATTAC 59.562 47.826 0.00 0.00 0.00 1.89
67 68 4.659115 GTGGGGTGTCAGGTTTAATTACT 58.341 43.478 0.00 0.00 0.00 2.24
68 69 5.569227 CGTGGGGTGTCAGGTTTAATTACTA 60.569 44.000 0.00 0.00 0.00 1.82
69 70 5.878669 GTGGGGTGTCAGGTTTAATTACTAG 59.121 44.000 0.00 0.00 0.00 2.57
70 71 5.548836 TGGGGTGTCAGGTTTAATTACTAGT 59.451 40.000 0.00 0.00 0.00 2.57
71 72 6.730038 TGGGGTGTCAGGTTTAATTACTAGTA 59.270 38.462 0.00 0.00 0.00 1.82
72 73 7.093201 TGGGGTGTCAGGTTTAATTACTAGTAG 60.093 40.741 2.23 0.00 0.00 2.57
73 74 7.093156 GGGGTGTCAGGTTTAATTACTAGTAGT 60.093 40.741 8.14 8.14 0.00 2.73
74 75 8.316946 GGGTGTCAGGTTTAATTACTAGTAGTT 58.683 37.037 14.28 14.28 0.00 2.24
75 76 9.363763 GGTGTCAGGTTTAATTACTAGTAGTTC 57.636 37.037 13.36 1.18 0.00 3.01
76 77 9.918630 GTGTCAGGTTTAATTACTAGTAGTTCA 57.081 33.333 13.36 1.23 0.00 3.18
90 91 8.553459 ACTAGTAGTTCATTTTTCATGTCCAG 57.447 34.615 0.00 0.00 0.00 3.86
91 92 8.375506 ACTAGTAGTTCATTTTTCATGTCCAGA 58.624 33.333 0.00 0.00 0.00 3.86
92 93 9.388506 CTAGTAGTTCATTTTTCATGTCCAGAT 57.611 33.333 0.00 0.00 0.00 2.90
93 94 8.048534 AGTAGTTCATTTTTCATGTCCAGATG 57.951 34.615 0.00 0.00 0.00 2.90
94 95 7.884877 AGTAGTTCATTTTTCATGTCCAGATGA 59.115 33.333 0.00 0.00 0.00 2.92
95 96 7.528996 AGTTCATTTTTCATGTCCAGATGAA 57.471 32.000 0.00 0.00 39.96 2.57
96 97 7.954835 AGTTCATTTTTCATGTCCAGATGAAA 58.045 30.769 7.59 7.59 46.05 2.69
97 98 8.591072 AGTTCATTTTTCATGTCCAGATGAAAT 58.409 29.630 11.48 10.10 46.62 2.17
98 99 9.211485 GTTCATTTTTCATGTCCAGATGAAATT 57.789 29.630 11.48 2.40 46.62 1.82
99 100 9.781633 TTCATTTTTCATGTCCAGATGAAATTT 57.218 25.926 11.48 0.00 46.62 1.82
100 101 9.781633 TCATTTTTCATGTCCAGATGAAATTTT 57.218 25.926 11.48 0.15 46.62 1.82
101 102 9.820229 CATTTTTCATGTCCAGATGAAATTTTG 57.180 29.630 11.48 7.16 46.62 2.44
102 103 9.781633 ATTTTTCATGTCCAGATGAAATTTTGA 57.218 25.926 11.48 0.00 46.62 2.69
103 104 9.610705 TTTTTCATGTCCAGATGAAATTTTGAA 57.389 25.926 11.48 2.27 46.62 2.69
104 105 8.592105 TTTCATGTCCAGATGAAATTTTGAAC 57.408 30.769 7.59 0.00 43.98 3.18
105 106 6.380995 TCATGTCCAGATGAAATTTTGAACG 58.619 36.000 0.00 0.00 29.11 3.95
106 107 6.206438 TCATGTCCAGATGAAATTTTGAACGA 59.794 34.615 0.00 0.00 29.11 3.85
107 108 6.000891 TGTCCAGATGAAATTTTGAACGAG 57.999 37.500 0.00 0.00 0.00 4.18
108 109 4.853743 GTCCAGATGAAATTTTGAACGAGC 59.146 41.667 0.00 0.00 0.00 5.03
109 110 3.848019 CCAGATGAAATTTTGAACGAGCG 59.152 43.478 0.00 0.00 0.00 5.03
110 111 3.848019 CAGATGAAATTTTGAACGAGCGG 59.152 43.478 0.00 0.00 0.00 5.52
111 112 2.044888 TGAAATTTTGAACGAGCGGC 57.955 45.000 0.00 0.00 0.00 6.53
113 114 1.001745 AAATTTTGAACGAGCGGCGC 61.002 50.000 26.86 26.86 46.04 6.53
114 115 3.645157 ATTTTGAACGAGCGGCGCG 62.645 57.895 27.59 24.07 46.04 6.86
122 123 4.807039 GAGCGGCGCGGGAACTAA 62.807 66.667 27.59 0.00 0.00 2.24
123 124 4.157120 AGCGGCGCGGGAACTAAT 62.157 61.111 27.59 1.71 0.00 1.73
124 125 3.199891 GCGGCGCGGGAACTAATT 61.200 61.111 19.09 0.00 0.00 1.40
125 126 1.884004 GCGGCGCGGGAACTAATTA 60.884 57.895 19.09 0.00 0.00 1.40
126 127 1.430707 GCGGCGCGGGAACTAATTAA 61.431 55.000 19.09 0.00 0.00 1.40
127 128 0.580104 CGGCGCGGGAACTAATTAAG 59.420 55.000 8.83 0.00 0.00 1.85
128 129 1.803625 CGGCGCGGGAACTAATTAAGA 60.804 52.381 8.83 0.00 0.00 2.10
129 130 2.282407 GGCGCGGGAACTAATTAAGAA 58.718 47.619 8.83 0.00 0.00 2.52
130 131 2.287103 GGCGCGGGAACTAATTAAGAAG 59.713 50.000 8.83 0.00 0.00 2.85
131 132 2.934553 GCGCGGGAACTAATTAAGAAGT 59.065 45.455 8.83 0.00 0.00 3.01
132 133 3.373130 GCGCGGGAACTAATTAAGAAGTT 59.627 43.478 8.83 5.21 38.62 2.66
133 134 4.726876 GCGCGGGAACTAATTAAGAAGTTG 60.727 45.833 8.83 0.00 36.10 3.16
134 135 4.390909 CGCGGGAACTAATTAAGAAGTTGT 59.609 41.667 9.33 0.00 36.10 3.32
135 136 5.577945 CGCGGGAACTAATTAAGAAGTTGTA 59.422 40.000 9.33 0.00 36.10 2.41
136 137 6.454715 CGCGGGAACTAATTAAGAAGTTGTAC 60.455 42.308 9.33 0.00 36.10 2.90
137 138 6.592994 GCGGGAACTAATTAAGAAGTTGTACT 59.407 38.462 9.33 0.00 36.10 2.73
138 139 7.761249 GCGGGAACTAATTAAGAAGTTGTACTA 59.239 37.037 9.33 0.00 36.10 1.82
139 140 9.080915 CGGGAACTAATTAAGAAGTTGTACTAC 57.919 37.037 9.33 0.00 36.10 2.73
140 141 9.933723 GGGAACTAATTAAGAAGTTGTACTACA 57.066 33.333 10.09 0.00 36.10 2.74
148 149 9.886132 ATTAAGAAGTTGTACTACATAACAGGG 57.114 33.333 10.09 0.00 31.01 4.45
149 150 5.731591 AGAAGTTGTACTACATAACAGGGC 58.268 41.667 10.09 0.00 31.01 5.19
150 151 5.484290 AGAAGTTGTACTACATAACAGGGCT 59.516 40.000 10.09 0.00 31.01 5.19
151 152 6.666546 AGAAGTTGTACTACATAACAGGGCTA 59.333 38.462 10.09 0.00 31.01 3.93
152 153 6.466885 AGTTGTACTACATAACAGGGCTAG 57.533 41.667 10.09 0.00 31.01 3.42
153 154 4.931661 TGTACTACATAACAGGGCTAGC 57.068 45.455 6.04 6.04 0.00 3.42
154 155 4.283337 TGTACTACATAACAGGGCTAGCA 58.717 43.478 18.24 0.00 0.00 3.49
155 156 4.341235 TGTACTACATAACAGGGCTAGCAG 59.659 45.833 18.24 8.28 0.00 4.24
156 157 2.103263 ACTACATAACAGGGCTAGCAGC 59.897 50.000 18.24 0.00 41.46 5.25
157 158 1.207791 ACATAACAGGGCTAGCAGCT 58.792 50.000 18.24 0.00 41.99 4.24
158 159 1.134280 ACATAACAGGGCTAGCAGCTG 60.134 52.381 18.24 10.11 41.99 4.24
159 160 1.134280 CATAACAGGGCTAGCAGCTGT 60.134 52.381 18.24 4.79 41.99 4.40
160 161 0.250234 TAACAGGGCTAGCAGCTGTG 59.750 55.000 18.24 6.12 41.99 3.66
161 162 1.483595 AACAGGGCTAGCAGCTGTGA 61.484 55.000 18.24 2.32 41.99 3.58
162 163 1.153409 CAGGGCTAGCAGCTGTGAG 60.153 63.158 18.24 13.61 41.99 3.51
163 164 2.188994 GGGCTAGCAGCTGTGAGG 59.811 66.667 18.24 4.77 41.99 3.86
164 165 2.664081 GGGCTAGCAGCTGTGAGGT 61.664 63.158 18.24 0.00 41.99 3.85
205 206 9.013229 TCAATTTCCATCTATGCATATTGGTAC 57.987 33.333 24.46 0.00 0.00 3.34
206 207 7.615582 ATTTCCATCTATGCATATTGGTACG 57.384 36.000 24.46 7.77 0.00 3.67
207 208 4.503910 TCCATCTATGCATATTGGTACGC 58.496 43.478 24.46 0.00 0.00 4.42
208 209 4.020662 TCCATCTATGCATATTGGTACGCA 60.021 41.667 24.46 10.75 39.01 5.24
209 210 4.694982 CCATCTATGCATATTGGTACGCAA 59.305 41.667 20.30 0.00 38.01 4.85
215 534 2.788786 GCATATTGGTACGCAAATGCAC 59.211 45.455 21.68 0.00 42.21 4.57
243 562 1.700042 GCCTACCTCCAGACCCATGG 61.700 65.000 4.14 4.14 42.11 3.66
248 567 1.200760 CCTCCAGACCCATGGTGTCA 61.201 60.000 25.83 11.60 41.43 3.58
253 572 1.448540 GACCCATGGTGTCAGCTCG 60.449 63.158 21.69 3.45 35.25 5.03
261 580 0.176680 GGTGTCAGCTCGATCACCAT 59.823 55.000 19.96 0.00 41.60 3.55
294 613 4.034258 GGCGTCCGTGTCTGTCGA 62.034 66.667 0.00 0.00 0.00 4.20
295 614 2.502080 GCGTCCGTGTCTGTCGAG 60.502 66.667 0.00 0.00 0.00 4.04
296 615 2.176055 CGTCCGTGTCTGTCGAGG 59.824 66.667 0.00 0.00 0.00 4.63
301 620 1.649390 CCGTGTCTGTCGAGGAGGAG 61.649 65.000 0.00 0.00 0.00 3.69
305 624 1.613925 TGTCTGTCGAGGAGGAGTTTG 59.386 52.381 0.00 0.00 0.00 2.93
313 632 3.119291 CGAGGAGGAGTTTGATCAATCG 58.881 50.000 9.40 9.05 0.00 3.34
314 633 3.181486 CGAGGAGGAGTTTGATCAATCGA 60.181 47.826 15.28 0.00 0.00 3.59
322 641 5.235186 GGAGTTTGATCAATCGAATCGATGT 59.765 40.000 19.44 8.41 46.30 3.06
325 644 4.320608 TGATCAATCGAATCGATGTGGA 57.679 40.909 19.44 16.31 46.30 4.02
331 650 3.422417 TCGAATCGATGTGGAGACTTC 57.578 47.619 0.00 0.00 0.00 3.01
366 685 9.252962 ACCAATCTCGTTAGTTAAATTATACGG 57.747 33.333 0.00 0.00 0.00 4.02
367 686 9.467258 CCAATCTCGTTAGTTAAATTATACGGA 57.533 33.333 0.00 0.00 0.00 4.69
389 708 7.499232 ACGGAGTATTATTTTCTGAATTGAGGG 59.501 37.037 0.00 0.00 41.94 4.30
390 709 7.041098 CGGAGTATTATTTTCTGAATTGAGGGG 60.041 40.741 0.00 0.00 0.00 4.79
391 710 7.998964 GGAGTATTATTTTCTGAATTGAGGGGA 59.001 37.037 0.00 0.00 0.00 4.81
410 729 4.652822 GGGACCAAAAACTCATCAGTACT 58.347 43.478 0.00 0.00 30.14 2.73
414 733 6.369065 GGACCAAAAACTCATCAGTACTACAG 59.631 42.308 0.00 0.00 30.14 2.74
415 734 6.827727 ACCAAAAACTCATCAGTACTACAGT 58.172 36.000 0.00 0.00 30.14 3.55
416 735 7.280356 ACCAAAAACTCATCAGTACTACAGTT 58.720 34.615 0.00 0.00 30.14 3.16
417 736 7.773690 ACCAAAAACTCATCAGTACTACAGTTT 59.226 33.333 11.88 11.88 35.98 2.66
418 737 8.283291 CCAAAAACTCATCAGTACTACAGTTTC 58.717 37.037 15.57 0.00 33.89 2.78
419 738 9.046296 CAAAAACTCATCAGTACTACAGTTTCT 57.954 33.333 15.57 5.29 33.89 2.52
420 739 8.594881 AAAACTCATCAGTACTACAGTTTCTG 57.405 34.615 15.57 7.49 33.89 3.02
421 740 5.715070 ACTCATCAGTACTACAGTTTCTGC 58.285 41.667 0.00 0.00 34.37 4.26
428 747 4.855105 ACAGTTTCTGCTGTGCGA 57.145 50.000 0.00 0.00 46.72 5.10
451 770 0.609681 TTAACGTTGGCCCATCCACC 60.610 55.000 11.99 0.00 46.55 4.61
455 774 3.188903 TTGGCCCATCCACCCACA 61.189 61.111 0.00 0.00 46.55 4.17
456 775 3.521765 TTGGCCCATCCACCCACAC 62.522 63.158 0.00 0.00 46.55 3.82
457 776 4.759205 GGCCCATCCACCCACACC 62.759 72.222 0.00 0.00 34.01 4.16
459 778 3.646715 CCCATCCACCCACACCGT 61.647 66.667 0.00 0.00 0.00 4.83
460 779 2.359850 CCATCCACCCACACCGTG 60.360 66.667 0.00 0.00 0.00 4.94
461 780 3.055719 CATCCACCCACACCGTGC 61.056 66.667 0.00 0.00 31.34 5.34
462 781 3.249189 ATCCACCCACACCGTGCT 61.249 61.111 0.00 0.00 31.34 4.40
467 823 0.309612 CACCCACACCGTGCTAAAAC 59.690 55.000 0.00 0.00 31.34 2.43
468 824 0.107116 ACCCACACCGTGCTAAAACA 60.107 50.000 0.00 0.00 31.34 2.83
473 829 1.595794 ACACCGTGCTAAAACACTTCG 59.404 47.619 0.00 0.00 38.45 3.79
475 831 1.595794 ACCGTGCTAAAACACTTCGTG 59.404 47.619 0.00 0.00 38.45 4.35
481 837 2.659291 GCTAAAACACTTCGTGACAGCG 60.659 50.000 0.38 0.00 36.96 5.18
484 840 1.767289 AACACTTCGTGACAGCGTAG 58.233 50.000 0.38 0.00 36.96 3.51
485 841 0.039437 ACACTTCGTGACAGCGTAGG 60.039 55.000 0.38 0.00 36.96 3.18
486 842 1.080705 ACTTCGTGACAGCGTAGGC 60.081 57.895 0.00 0.00 34.35 3.93
513 869 2.959030 TCCACTCATTCATCCCTCGTAG 59.041 50.000 0.00 0.00 0.00 3.51
534 890 2.749441 GCTCTCAGCACCCAAGCC 60.749 66.667 0.00 0.00 41.89 4.35
537 893 2.249413 CTCTCAGCACCCAAGCCGAT 62.249 60.000 0.00 0.00 34.23 4.18
539 895 0.531532 CTCAGCACCCAAGCCGATAG 60.532 60.000 0.00 0.00 34.23 2.08
551 907 3.843304 CGATAGGTCTCACGCCCT 58.157 61.111 0.00 0.00 34.74 5.19
552 908 2.116383 CGATAGGTCTCACGCCCTT 58.884 57.895 0.00 0.00 32.08 3.95
553 909 0.030908 CGATAGGTCTCACGCCCTTC 59.969 60.000 0.00 0.00 32.08 3.46
554 910 1.404843 GATAGGTCTCACGCCCTTCT 58.595 55.000 0.00 0.00 32.08 2.85
555 911 1.338655 GATAGGTCTCACGCCCTTCTC 59.661 57.143 0.00 0.00 32.08 2.87
557 913 2.283529 GGTCTCACGCCCTTCTCCA 61.284 63.158 0.00 0.00 0.00 3.86
558 914 1.079750 GTCTCACGCCCTTCTCCAC 60.080 63.158 0.00 0.00 0.00 4.02
560 916 3.649277 CTCACGCCCTTCTCCACCG 62.649 68.421 0.00 0.00 0.00 4.94
561 917 4.003788 CACGCCCTTCTCCACCGT 62.004 66.667 0.00 0.00 0.00 4.83
562 918 2.283388 ACGCCCTTCTCCACCGTA 60.283 61.111 0.00 0.00 0.00 4.02
563 919 2.183555 CGCCCTTCTCCACCGTAC 59.816 66.667 0.00 0.00 0.00 3.67
564 920 2.582978 GCCCTTCTCCACCGTACC 59.417 66.667 0.00 0.00 0.00 3.34
567 923 1.305887 CCTTCTCCACCGTACCCCT 60.306 63.158 0.00 0.00 0.00 4.79
568 924 1.614241 CCTTCTCCACCGTACCCCTG 61.614 65.000 0.00 0.00 0.00 4.45
583 940 4.742201 CTGCCCGTCACCGTCCAG 62.742 72.222 0.00 0.00 0.00 3.86
639 1016 2.577059 GCCTGCACTACGCCACTA 59.423 61.111 0.00 0.00 41.33 2.74
640 1017 1.810030 GCCTGCACTACGCCACTAC 60.810 63.158 0.00 0.00 41.33 2.73
642 1019 1.516386 CTGCACTACGCCACTACCG 60.516 63.158 0.00 0.00 41.33 4.02
643 1020 2.884207 GCACTACGCCACTACCGC 60.884 66.667 0.00 0.00 32.94 5.68
664 1110 0.748729 ACGCTCTTCCCTCGAGGTAG 60.749 60.000 29.25 23.89 36.75 3.18
691 1145 4.703379 AAGGCCTGATCCTTATCTCTTG 57.297 45.455 5.69 0.00 44.23 3.02
694 1148 3.556843 GGCCTGATCCTTATCTCTTGAGC 60.557 52.174 0.00 0.00 32.93 4.26
724 1178 1.949799 AGCTTGGAGTGGATCTGACT 58.050 50.000 0.00 0.00 0.00 3.41
725 1179 1.554160 AGCTTGGAGTGGATCTGACTG 59.446 52.381 3.05 0.00 0.00 3.51
730 1184 1.902508 GGAGTGGATCTGACTGACCAA 59.097 52.381 3.05 0.00 34.11 3.67
731 1185 2.354203 GGAGTGGATCTGACTGACCAAC 60.354 54.545 3.05 0.00 34.11 3.77
733 1187 1.347707 GTGGATCTGACTGACCAACCA 59.652 52.381 0.00 0.00 34.11 3.67
734 1188 2.026822 GTGGATCTGACTGACCAACCAT 60.027 50.000 0.00 0.00 34.11 3.55
735 1189 2.026915 TGGATCTGACTGACCAACCATG 60.027 50.000 0.00 0.00 0.00 3.66
736 1190 2.012673 GATCTGACTGACCAACCATGC 58.987 52.381 0.00 0.00 0.00 4.06
737 1191 1.059098 TCTGACTGACCAACCATGCT 58.941 50.000 0.00 0.00 0.00 3.79
738 1192 1.421268 TCTGACTGACCAACCATGCTT 59.579 47.619 0.00 0.00 0.00 3.91
739 1193 1.538512 CTGACTGACCAACCATGCTTG 59.461 52.381 0.00 0.00 0.00 4.01
740 1194 0.242017 GACTGACCAACCATGCTTGC 59.758 55.000 0.00 0.00 0.00 4.01
741 1195 0.178981 ACTGACCAACCATGCTTGCT 60.179 50.000 0.00 0.00 0.00 3.91
742 1196 0.242825 CTGACCAACCATGCTTGCTG 59.757 55.000 0.00 0.00 0.00 4.41
743 1197 1.180456 TGACCAACCATGCTTGCTGG 61.180 55.000 14.03 14.03 39.80 4.85
746 1200 0.611618 CCAACCATGCTTGCTGGGTA 60.612 55.000 12.94 0.00 38.14 3.69
750 1204 1.027357 CCATGCTTGCTGGGTATGAC 58.973 55.000 0.00 0.00 0.00 3.06
766 1220 4.399303 GGTATGACCTCCCATTTTCTGTTG 59.601 45.833 0.00 0.00 34.73 3.33
769 1223 3.117701 TGACCTCCCATTTTCTGTTGACA 60.118 43.478 0.00 0.00 0.00 3.58
783 1237 5.463286 TCTGTTGACAAAAGCTTGCATATG 58.537 37.500 0.00 0.00 35.84 1.78
784 1238 4.558178 TGTTGACAAAAGCTTGCATATGG 58.442 39.130 0.00 0.00 35.84 2.74
788 1242 4.523943 TGACAAAAGCTTGCATATGGTCTT 59.476 37.500 0.00 0.00 35.84 3.01
804 1258 0.246635 TCTTTCTAGTGCGCTCCACC 59.753 55.000 9.73 0.00 45.83 4.61
820 1274 2.361230 CCGCTTCAAAGGTCCCCC 60.361 66.667 0.00 0.00 0.00 5.40
821 1275 2.746277 CGCTTCAAAGGTCCCCCG 60.746 66.667 0.00 0.00 35.12 5.73
844 1298 0.747852 AGGAAACTCGCCTAGCTAGC 59.252 55.000 15.74 6.62 32.90 3.42
845 1299 0.747852 GGAAACTCGCCTAGCTAGCT 59.252 55.000 23.12 23.12 0.00 3.32
846 1300 1.955080 GGAAACTCGCCTAGCTAGCTA 59.045 52.381 22.85 22.85 0.00 3.32
847 1301 2.030628 GGAAACTCGCCTAGCTAGCTAG 60.031 54.545 35.39 35.39 44.07 3.42
848 1302 2.351706 AACTCGCCTAGCTAGCTAGT 57.648 50.000 37.50 25.58 43.22 2.57
849 1303 2.351706 ACTCGCCTAGCTAGCTAGTT 57.648 50.000 37.50 18.30 43.22 2.24
856 1310 1.381928 TAGCTAGCTAGTTGCCGCGT 61.382 55.000 20.67 0.00 44.23 6.01
858 1312 1.878522 CTAGCTAGTTGCCGCGTGG 60.879 63.158 11.67 11.67 44.23 4.94
900 1354 2.475466 CGCTTCGCCGACTAGGGTA 61.475 63.158 0.00 0.00 41.48 3.69
901 1355 1.359475 GCTTCGCCGACTAGGGTAG 59.641 63.158 0.00 0.00 41.48 3.18
902 1356 2.031360 CTTCGCCGACTAGGGTAGG 58.969 63.158 0.00 0.00 41.48 3.18
903 1357 0.750911 CTTCGCCGACTAGGGTAGGT 60.751 60.000 0.00 0.00 39.85 3.08
912 1366 2.888414 GACTAGGGTAGGTGAGCTCATC 59.112 54.545 21.47 20.60 0.00 2.92
945 1399 9.605275 TCTCATTCTCGACTGATTTAATTCATT 57.395 29.630 0.74 0.00 0.00 2.57
946 1400 9.861138 CTCATTCTCGACTGATTTAATTCATTC 57.139 33.333 0.74 4.53 0.00 2.67
950 1404 9.435688 TTCTCGACTGATTTAATTCATTCTTGA 57.564 29.630 12.87 9.14 0.00 3.02
1090 2093 1.447945 GTCAGCTGCTTCTTCTTCCC 58.552 55.000 9.47 0.00 0.00 3.97
1103 2112 2.532715 TTCCCCCTCCAAGCAGCT 60.533 61.111 0.00 0.00 0.00 4.24
1105 2114 0.844661 TTCCCCCTCCAAGCAGCTAA 60.845 55.000 0.00 0.00 0.00 3.09
1131 2140 0.385473 AAAAATCTGCAACGGCGTCG 60.385 50.000 15.17 8.42 45.35 5.12
1265 2274 2.732016 CGTGTGGGGAACGAGTGA 59.268 61.111 0.00 0.00 43.68 3.41
1312 2321 4.765339 TCAGTGAAGTCTACGAGAATCCAA 59.235 41.667 0.00 0.00 0.00 3.53
1369 2378 7.330744 GTCAGGCTGACACATCCTTTTGATG 62.331 48.000 36.14 0.80 46.22 3.07
1395 2404 3.027974 GACTTCGTCCACAGCTTAGTT 57.972 47.619 0.00 0.00 0.00 2.24
1396 2405 2.987821 GACTTCGTCCACAGCTTAGTTC 59.012 50.000 0.00 0.00 0.00 3.01
1404 2413 2.481952 CCACAGCTTAGTTCAGCAGTTC 59.518 50.000 0.00 0.00 42.84 3.01
1413 2422 4.558226 AGTTCAGCAGTTCCATCATACA 57.442 40.909 0.00 0.00 0.00 2.29
1418 2427 5.069318 TCAGCAGTTCCATCATACAACAAA 58.931 37.500 0.00 0.00 0.00 2.83
1419 2428 5.711506 TCAGCAGTTCCATCATACAACAAAT 59.288 36.000 0.00 0.00 0.00 2.32
1421 2430 5.711506 AGCAGTTCCATCATACAACAAATGA 59.288 36.000 0.00 0.00 37.73 2.57
1428 2437 5.816449 ATCATACAACAAATGATGCACGA 57.184 34.783 0.00 0.00 41.43 4.35
1429 2438 5.220557 TCATACAACAAATGATGCACGAG 57.779 39.130 0.00 0.00 0.00 4.18
1430 2439 4.934602 TCATACAACAAATGATGCACGAGA 59.065 37.500 0.00 0.00 0.00 4.04
1431 2440 5.411053 TCATACAACAAATGATGCACGAGAA 59.589 36.000 0.00 0.00 0.00 2.87
1432 2441 4.151258 ACAACAAATGATGCACGAGAAG 57.849 40.909 0.00 0.00 0.00 2.85
1439 2453 1.203928 GATGCACGAGAAGATGGACG 58.796 55.000 0.00 0.00 0.00 4.79
1446 2460 3.066064 CACGAGAAGATGGACGAGAAGAT 59.934 47.826 0.00 0.00 0.00 2.40
1477 2493 2.619074 GCTGGCTCAGGAGTTTTATGGT 60.619 50.000 4.65 0.00 31.21 3.55
1486 2502 7.414540 GCTCAGGAGTTTTATGGTTATGTGAAG 60.415 40.741 0.00 0.00 0.00 3.02
1495 2511 2.565391 TGGTTATGTGAAGCGGAAGAGA 59.435 45.455 0.00 0.00 0.00 3.10
1502 2518 3.068732 TGTGAAGCGGAAGAGATATCTGG 59.931 47.826 10.74 0.00 0.00 3.86
1508 2524 3.722147 CGGAAGAGATATCTGGTTGTGG 58.278 50.000 10.74 0.00 0.00 4.17
1542 2558 1.070445 CCATCGAGGAGTGGCATCC 59.930 63.158 0.00 7.60 41.22 3.51
1577 2607 3.716353 ACATGGGGTGCAGAATCATAGTA 59.284 43.478 0.00 0.00 0.00 1.82
1751 2781 7.601073 TCCATCATTGCTATTTCGATATGTC 57.399 36.000 0.00 0.00 0.00 3.06
1823 2860 6.936968 AGAGTGAACTACATCTTTTACCCT 57.063 37.500 0.00 0.00 0.00 4.34
1826 2863 7.894364 AGAGTGAACTACATCTTTTACCCTCTA 59.106 37.037 0.00 0.00 0.00 2.43
1844 2881 5.051816 CCTCTAGTTTTACGTTTGTGACCA 58.948 41.667 0.00 0.00 0.00 4.02
1851 2888 8.397215 AGTTTTACGTTTGTGACCATTTTTAC 57.603 30.769 0.00 0.00 0.00 2.01
1877 2914 7.312899 CCCATTTAACAGATTTTAGCGAAACT 58.687 34.615 0.00 0.00 0.00 2.66
1895 2932 3.726291 ACTTGTGCCACAAATTACACC 57.274 42.857 11.99 0.00 37.69 4.16
1897 2934 1.333177 TGTGCCACAAATTACACCCC 58.667 50.000 0.00 0.00 31.98 4.95
1901 2938 2.630580 TGCCACAAATTACACCCCTTTC 59.369 45.455 0.00 0.00 0.00 2.62
1903 2940 2.565391 CCACAAATTACACCCCTTTCCC 59.435 50.000 0.00 0.00 0.00 3.97
1905 2942 1.822371 CAAATTACACCCCTTTCCCCG 59.178 52.381 0.00 0.00 0.00 5.73
1931 2968 0.036105 TGCTGACTGTACCTGCCATG 60.036 55.000 0.00 0.00 0.00 3.66
1933 2970 1.611673 GCTGACTGTACCTGCCATGTT 60.612 52.381 0.00 0.00 0.00 2.71
1934 2971 2.354704 GCTGACTGTACCTGCCATGTTA 60.355 50.000 0.00 0.00 0.00 2.41
1937 2974 3.071747 TGACTGTACCTGCCATGTTAACA 59.928 43.478 11.41 11.41 0.00 2.41
1938 2975 3.674997 ACTGTACCTGCCATGTTAACAG 58.325 45.455 14.65 2.42 38.97 3.16
1946 2983 5.240844 ACCTGCCATGTTAACAGTTTAGTTC 59.759 40.000 14.65 0.00 33.07 3.01
1956 2993 3.200483 ACAGTTTAGTTCGCTTTCGGTT 58.800 40.909 0.00 0.00 36.13 4.44
1969 3006 4.368315 GCTTTCGGTTTTCCATCTGTTTT 58.632 39.130 0.00 0.00 40.70 2.43
1992 3029 7.595819 TTTTACAGAATCAATCCAAACTGGT 57.404 32.000 0.00 0.00 39.03 4.00
1993 3030 8.698973 TTTTACAGAATCAATCCAAACTGGTA 57.301 30.769 0.00 0.00 39.03 3.25
1994 3031 7.681939 TTACAGAATCAATCCAAACTGGTAC 57.318 36.000 0.00 0.00 39.03 3.34
1995 3032 5.630121 ACAGAATCAATCCAAACTGGTACA 58.370 37.500 0.00 0.00 39.03 2.90
1996 3033 5.473504 ACAGAATCAATCCAAACTGGTACAC 59.526 40.000 0.00 0.00 39.03 2.90
1997 3034 4.695455 AGAATCAATCCAAACTGGTACACG 59.305 41.667 0.00 0.00 39.03 4.49
1998 3035 2.147958 TCAATCCAAACTGGTACACGC 58.852 47.619 0.00 0.00 39.03 5.34
1999 3036 2.151202 CAATCCAAACTGGTACACGCT 58.849 47.619 0.00 0.00 39.03 5.07
2000 3037 1.808411 ATCCAAACTGGTACACGCTG 58.192 50.000 0.00 0.00 39.03 5.18
2001 3038 0.466543 TCCAAACTGGTACACGCTGT 59.533 50.000 0.00 0.00 39.03 4.40
2002 3039 1.687660 TCCAAACTGGTACACGCTGTA 59.312 47.619 0.00 0.00 39.03 2.74
2003 3040 2.102757 TCCAAACTGGTACACGCTGTAA 59.897 45.455 0.00 0.00 39.03 2.41
2004 3041 2.222445 CCAAACTGGTACACGCTGTAAC 59.778 50.000 0.00 6.33 40.82 2.50
2006 3043 2.144482 ACTGGTACACGCTGTAACAC 57.856 50.000 10.55 0.00 44.80 3.32
2007 3044 1.269936 ACTGGTACACGCTGTAACACC 60.270 52.381 10.55 6.68 44.80 4.16
2008 3045 0.751452 TGGTACACGCTGTAACACCA 59.249 50.000 10.55 8.66 44.80 4.17
2009 3046 1.138464 TGGTACACGCTGTAACACCAA 59.862 47.619 10.55 0.00 44.80 3.67
2010 3047 1.528161 GGTACACGCTGTAACACCAAC 59.472 52.381 7.91 0.00 40.18 3.77
2298 3335 7.643528 AAAGTATATGATATGCACACTCGTG 57.356 36.000 3.44 0.00 46.56 4.35
2333 3370 3.780357 TGGTACACGCTGCACCTA 58.220 55.556 8.16 0.00 34.84 3.08
2334 3371 1.589630 TGGTACACGCTGCACCTAG 59.410 57.895 8.16 0.00 34.84 3.02
2335 3372 1.810030 GGTACACGCTGCACCTAGC 60.810 63.158 0.00 0.00 45.96 3.42
2336 3373 1.215647 GTACACGCTGCACCTAGCT 59.784 57.895 0.00 0.00 45.94 3.32
2337 3374 0.389948 GTACACGCTGCACCTAGCTT 60.390 55.000 0.00 0.00 45.94 3.74
2338 3375 1.135199 GTACACGCTGCACCTAGCTTA 60.135 52.381 0.00 0.00 45.94 3.09
2339 3376 0.108615 ACACGCTGCACCTAGCTTAG 60.109 55.000 0.00 0.00 45.94 2.18
2340 3377 1.153549 ACGCTGCACCTAGCTTAGC 60.154 57.895 0.00 0.00 45.94 3.09
2341 3378 1.884926 CGCTGCACCTAGCTTAGCC 60.885 63.158 0.00 0.00 45.94 3.93
2342 3379 1.524482 GCTGCACCTAGCTTAGCCT 59.476 57.895 0.00 0.00 45.94 4.58
2343 3380 0.753262 GCTGCACCTAGCTTAGCCTA 59.247 55.000 0.00 0.00 45.94 3.93
2344 3381 1.270041 GCTGCACCTAGCTTAGCCTAG 60.270 57.143 0.00 2.36 45.94 3.02
2348 3385 3.037941 CCTAGCTTAGCCTAGGCGA 57.962 57.895 27.83 20.96 45.71 5.54
2349 3386 1.329256 CCTAGCTTAGCCTAGGCGAA 58.671 55.000 27.83 26.52 45.71 4.70
2350 3387 1.000052 CCTAGCTTAGCCTAGGCGAAC 60.000 57.143 27.83 20.72 45.71 3.95
2351 3388 4.231818 CCTAGCTTAGCCTAGGCGAACC 62.232 59.091 27.83 19.59 45.71 3.62
2363 3400 3.636231 CGAACCTGCCTCACCCCA 61.636 66.667 0.00 0.00 0.00 4.96
2364 3401 2.034221 GAACCTGCCTCACCCCAC 59.966 66.667 0.00 0.00 0.00 4.61
2365 3402 3.569200 GAACCTGCCTCACCCCACC 62.569 68.421 0.00 0.00 0.00 4.61
2368 3405 3.341629 CTGCCTCACCCCACCCAT 61.342 66.667 0.00 0.00 0.00 4.00
2369 3406 2.000701 CTGCCTCACCCCACCCATA 61.001 63.158 0.00 0.00 0.00 2.74
2370 3407 2.270874 CTGCCTCACCCCACCCATAC 62.271 65.000 0.00 0.00 0.00 2.39
2371 3408 3.056754 GCCTCACCCCACCCATACC 62.057 68.421 0.00 0.00 0.00 2.73
2372 3409 2.383601 CCTCACCCCACCCATACCC 61.384 68.421 0.00 0.00 0.00 3.69
2373 3410 2.689402 TCACCCCACCCATACCCG 60.689 66.667 0.00 0.00 0.00 5.28
2374 3411 4.499633 CACCCCACCCATACCCGC 62.500 72.222 0.00 0.00 0.00 6.13
2376 3413 4.499633 CCCCACCCATACCCGCAC 62.500 72.222 0.00 0.00 0.00 5.34
2377 3414 4.499633 CCCACCCATACCCGCACC 62.500 72.222 0.00 0.00 0.00 5.01
2378 3415 3.722813 CCACCCATACCCGCACCA 61.723 66.667 0.00 0.00 0.00 4.17
2379 3416 2.124736 CACCCATACCCGCACCAG 60.125 66.667 0.00 0.00 0.00 4.00
2380 3417 2.285069 ACCCATACCCGCACCAGA 60.285 61.111 0.00 0.00 0.00 3.86
2381 3418 1.692749 ACCCATACCCGCACCAGAT 60.693 57.895 0.00 0.00 0.00 2.90
2382 3419 1.071471 CCCATACCCGCACCAGATC 59.929 63.158 0.00 0.00 0.00 2.75
2383 3420 1.071471 CCATACCCGCACCAGATCC 59.929 63.158 0.00 0.00 0.00 3.36
2384 3421 1.695114 CCATACCCGCACCAGATCCA 61.695 60.000 0.00 0.00 0.00 3.41
2385 3422 0.532862 CATACCCGCACCAGATCCAC 60.533 60.000 0.00 0.00 0.00 4.02
2386 3423 0.691078 ATACCCGCACCAGATCCACT 60.691 55.000 0.00 0.00 0.00 4.00
2387 3424 1.613317 TACCCGCACCAGATCCACTG 61.613 60.000 0.00 0.00 45.36 3.66
2388 3425 2.821366 CCGCACCAGATCCACTGC 60.821 66.667 0.00 0.00 44.52 4.40
2389 3426 2.046988 CGCACCAGATCCACTGCA 60.047 61.111 6.84 0.00 44.52 4.41
2390 3427 2.393768 CGCACCAGATCCACTGCAC 61.394 63.158 6.84 0.00 44.52 4.57
2391 3428 2.042831 GCACCAGATCCACTGCACC 61.043 63.158 0.00 0.00 44.52 5.01
2392 3429 1.742880 CACCAGATCCACTGCACCG 60.743 63.158 0.00 0.00 44.52 4.94
2393 3430 2.821366 CCAGATCCACTGCACCGC 60.821 66.667 0.00 0.00 44.52 5.68
2394 3431 3.190849 CAGATCCACTGCACCGCG 61.191 66.667 0.00 0.00 39.86 6.46
2414 3451 3.087253 CGCACCCTCCCACCCATA 61.087 66.667 0.00 0.00 0.00 2.74
2415 3452 2.919043 GCACCCTCCCACCCATAG 59.081 66.667 0.00 0.00 0.00 2.23
2416 3453 2.001269 GCACCCTCCCACCCATAGT 61.001 63.158 0.00 0.00 0.00 2.12
2417 3454 1.571773 GCACCCTCCCACCCATAGTT 61.572 60.000 0.00 0.00 0.00 2.24
2418 3455 0.999712 CACCCTCCCACCCATAGTTT 59.000 55.000 0.00 0.00 0.00 2.66
2419 3456 2.201830 CACCCTCCCACCCATAGTTTA 58.798 52.381 0.00 0.00 0.00 2.01
2420 3457 2.578940 CACCCTCCCACCCATAGTTTAA 59.421 50.000 0.00 0.00 0.00 1.52
2421 3458 3.010808 CACCCTCCCACCCATAGTTTAAA 59.989 47.826 0.00 0.00 0.00 1.52
2422 3459 3.663632 ACCCTCCCACCCATAGTTTAAAA 59.336 43.478 0.00 0.00 0.00 1.52
2423 3460 4.108287 ACCCTCCCACCCATAGTTTAAAAA 59.892 41.667 0.00 0.00 0.00 1.94
2439 3476 1.859383 AAAAACCGAAATGGCAACCG 58.141 45.000 0.00 0.00 43.94 4.44
2440 3477 1.033574 AAAACCGAAATGGCAACCGA 58.966 45.000 7.86 0.00 43.94 4.69
2441 3478 1.033574 AAACCGAAATGGCAACCGAA 58.966 45.000 7.86 0.00 43.94 4.30
2442 3479 0.312729 AACCGAAATGGCAACCGAAC 59.687 50.000 7.86 0.00 43.94 3.95
2443 3480 1.211709 CCGAAATGGCAACCGAACC 59.788 57.895 7.86 0.00 0.00 3.62
2444 3481 1.519751 CCGAAATGGCAACCGAACCA 61.520 55.000 7.86 0.00 41.06 3.67
2445 3482 0.109781 CGAAATGGCAACCGAACCAG 60.110 55.000 0.00 0.00 39.88 4.00
2446 3483 0.958822 GAAATGGCAACCGAACCAGT 59.041 50.000 0.00 0.00 39.88 4.00
2447 3484 0.673437 AAATGGCAACCGAACCAGTG 59.327 50.000 0.00 0.00 39.88 3.66
2448 3485 0.179004 AATGGCAACCGAACCAGTGA 60.179 50.000 0.00 0.00 39.88 3.41
2449 3486 0.606401 ATGGCAACCGAACCAGTGAG 60.606 55.000 0.00 0.00 39.88 3.51
2450 3487 1.966451 GGCAACCGAACCAGTGAGG 60.966 63.158 0.00 0.00 45.67 3.86
2451 3488 2.617274 GCAACCGAACCAGTGAGGC 61.617 63.158 0.00 0.00 43.14 4.70
2452 3489 1.071471 CAACCGAACCAGTGAGGCT 59.929 57.895 0.00 0.00 43.14 4.58
2453 3490 0.320374 CAACCGAACCAGTGAGGCTA 59.680 55.000 0.00 0.00 43.14 3.93
2454 3491 1.066143 CAACCGAACCAGTGAGGCTAT 60.066 52.381 0.00 0.00 43.14 2.97
2455 3492 0.824759 ACCGAACCAGTGAGGCTATC 59.175 55.000 0.00 0.00 43.14 2.08
2456 3493 0.249073 CCGAACCAGTGAGGCTATCG 60.249 60.000 0.00 0.00 43.14 2.92
2457 3494 0.249073 CGAACCAGTGAGGCTATCGG 60.249 60.000 0.00 0.00 43.14 4.18
2458 3495 0.824759 GAACCAGTGAGGCTATCGGT 59.175 55.000 0.00 0.00 43.14 4.69
2459 3496 0.824759 AACCAGTGAGGCTATCGGTC 59.175 55.000 0.00 0.00 43.14 4.79
2460 3497 1.043673 ACCAGTGAGGCTATCGGTCC 61.044 60.000 0.00 0.00 43.14 4.46
2461 3498 1.043116 CCAGTGAGGCTATCGGTCCA 61.043 60.000 0.00 0.00 0.00 4.02
2462 3499 0.387202 CAGTGAGGCTATCGGTCCAG 59.613 60.000 0.00 0.00 0.00 3.86
2463 3500 0.757188 AGTGAGGCTATCGGTCCAGG 60.757 60.000 0.00 0.00 0.00 4.45
2464 3501 1.457643 TGAGGCTATCGGTCCAGGG 60.458 63.158 0.00 0.00 0.00 4.45
2465 3502 1.457831 GAGGCTATCGGTCCAGGGT 60.458 63.158 0.00 0.00 0.00 4.34
2466 3503 1.003051 AGGCTATCGGTCCAGGGTT 59.997 57.895 0.00 0.00 0.00 4.11
2467 3504 0.620700 AGGCTATCGGTCCAGGGTTT 60.621 55.000 0.00 0.00 0.00 3.27
2468 3505 0.255033 GGCTATCGGTCCAGGGTTTT 59.745 55.000 0.00 0.00 0.00 2.43
2469 3506 1.487558 GGCTATCGGTCCAGGGTTTTA 59.512 52.381 0.00 0.00 0.00 1.52
2470 3507 2.558378 GCTATCGGTCCAGGGTTTTAC 58.442 52.381 0.00 0.00 0.00 2.01
2471 3508 2.169978 GCTATCGGTCCAGGGTTTTACT 59.830 50.000 0.00 0.00 0.00 2.24
2472 3509 2.781681 ATCGGTCCAGGGTTTTACTG 57.218 50.000 0.00 0.00 35.74 2.74
2473 3510 1.719529 TCGGTCCAGGGTTTTACTGA 58.280 50.000 0.00 0.00 38.20 3.41
2474 3511 2.262637 TCGGTCCAGGGTTTTACTGAT 58.737 47.619 0.00 0.00 38.20 2.90
2475 3512 2.235402 TCGGTCCAGGGTTTTACTGATC 59.765 50.000 0.00 0.00 38.20 2.92
2476 3513 2.629051 GGTCCAGGGTTTTACTGATCG 58.371 52.381 0.00 0.00 38.20 3.69
2477 3514 2.235402 GGTCCAGGGTTTTACTGATCGA 59.765 50.000 0.00 0.00 38.20 3.59
2478 3515 3.307199 GGTCCAGGGTTTTACTGATCGAA 60.307 47.826 0.00 0.00 38.20 3.71
2479 3516 4.514401 GTCCAGGGTTTTACTGATCGAAT 58.486 43.478 0.00 0.00 38.20 3.34
2480 3517 4.332819 GTCCAGGGTTTTACTGATCGAATG 59.667 45.833 0.00 0.00 38.20 2.67
2481 3518 3.627577 CCAGGGTTTTACTGATCGAATGG 59.372 47.826 0.00 0.00 38.20 3.16
2482 3519 3.065371 CAGGGTTTTACTGATCGAATGGC 59.935 47.826 0.00 0.00 38.20 4.40
2483 3520 3.054361 AGGGTTTTACTGATCGAATGGCT 60.054 43.478 0.00 0.00 0.00 4.75
2484 3521 3.065371 GGGTTTTACTGATCGAATGGCTG 59.935 47.826 0.00 0.00 0.00 4.85
2485 3522 3.065371 GGTTTTACTGATCGAATGGCTGG 59.935 47.826 0.00 0.00 0.00 4.85
2486 3523 3.627395 TTTACTGATCGAATGGCTGGT 57.373 42.857 0.00 0.00 0.00 4.00
2487 3524 3.627395 TTACTGATCGAATGGCTGGTT 57.373 42.857 0.00 0.00 0.00 3.67
2488 3525 2.029838 ACTGATCGAATGGCTGGTTC 57.970 50.000 0.00 0.00 0.00 3.62
2489 3526 1.278985 ACTGATCGAATGGCTGGTTCA 59.721 47.619 0.00 0.00 0.00 3.18
2490 3527 2.092753 ACTGATCGAATGGCTGGTTCAT 60.093 45.455 0.00 0.00 0.00 2.57
2491 3528 2.547211 CTGATCGAATGGCTGGTTCATC 59.453 50.000 0.00 0.00 0.00 2.92
2492 3529 1.528586 GATCGAATGGCTGGTTCATCG 59.471 52.381 0.00 0.00 0.00 3.84
2493 3530 0.461870 TCGAATGGCTGGTTCATCGG 60.462 55.000 0.00 0.00 0.00 4.18
2494 3531 0.744414 CGAATGGCTGGTTCATCGGT 60.744 55.000 0.00 0.00 0.00 4.69
2495 3532 1.463674 GAATGGCTGGTTCATCGGTT 58.536 50.000 0.00 0.00 0.00 4.44
2496 3533 1.401905 GAATGGCTGGTTCATCGGTTC 59.598 52.381 0.00 0.00 0.00 3.62
2497 3534 0.327924 ATGGCTGGTTCATCGGTTCA 59.672 50.000 0.00 0.00 0.00 3.18
2498 3535 0.327924 TGGCTGGTTCATCGGTTCAT 59.672 50.000 0.00 0.00 0.00 2.57
2499 3536 1.271871 TGGCTGGTTCATCGGTTCATT 60.272 47.619 0.00 0.00 0.00 2.57
2500 3537 1.818674 GGCTGGTTCATCGGTTCATTT 59.181 47.619 0.00 0.00 0.00 2.32
2501 3538 3.013921 GGCTGGTTCATCGGTTCATTTA 58.986 45.455 0.00 0.00 0.00 1.40
2502 3539 3.632145 GGCTGGTTCATCGGTTCATTTAT 59.368 43.478 0.00 0.00 0.00 1.40
2503 3540 4.498009 GGCTGGTTCATCGGTTCATTTATG 60.498 45.833 0.00 0.00 0.00 1.90
2504 3541 4.335315 GCTGGTTCATCGGTTCATTTATGA 59.665 41.667 0.00 0.00 34.44 2.15
2505 3542 5.730568 GCTGGTTCATCGGTTCATTTATGAC 60.731 44.000 0.00 0.00 36.36 3.06
2506 3543 5.249420 TGGTTCATCGGTTCATTTATGACA 58.751 37.500 0.00 0.00 36.36 3.58
2507 3544 5.707764 TGGTTCATCGGTTCATTTATGACAA 59.292 36.000 0.00 0.00 36.36 3.18
2508 3545 6.207614 TGGTTCATCGGTTCATTTATGACAAA 59.792 34.615 0.00 0.00 36.36 2.83
2509 3546 7.087639 GGTTCATCGGTTCATTTATGACAAAA 58.912 34.615 0.00 0.00 36.36 2.44
2510 3547 7.596995 GGTTCATCGGTTCATTTATGACAAAAA 59.403 33.333 0.00 0.00 36.36 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.882876 GCCCAATGCAGCTGTCTG 59.117 61.111 16.64 9.95 43.16 3.51
6 7 2.749044 CGCCCAATGCAGCTGTCT 60.749 61.111 16.64 0.00 41.33 3.41
7 8 4.487412 GCGCCCAATGCAGCTGTC 62.487 66.667 16.64 8.39 41.33 3.51
13 14 1.321805 ATTTAGCTGCGCCCAATGCA 61.322 50.000 4.18 0.00 41.33 3.96
14 15 0.667993 TATTTAGCTGCGCCCAATGC 59.332 50.000 4.18 1.27 0.00 3.56
15 16 3.181487 ACTTTATTTAGCTGCGCCCAATG 60.181 43.478 4.18 0.00 0.00 2.82
16 17 3.023832 ACTTTATTTAGCTGCGCCCAAT 58.976 40.909 4.18 0.00 0.00 3.16
17 18 2.163412 CACTTTATTTAGCTGCGCCCAA 59.837 45.455 4.18 0.00 0.00 4.12
18 19 1.742831 CACTTTATTTAGCTGCGCCCA 59.257 47.619 4.18 0.00 0.00 5.36
19 20 1.533965 GCACTTTATTTAGCTGCGCCC 60.534 52.381 4.18 0.00 0.00 6.13
20 21 1.132262 TGCACTTTATTTAGCTGCGCC 59.868 47.619 4.18 0.00 0.00 6.53
21 22 2.542766 TGCACTTTATTTAGCTGCGC 57.457 45.000 0.00 0.00 0.00 6.09
22 23 4.666176 CGTTATGCACTTTATTTAGCTGCG 59.334 41.667 0.00 0.00 0.00 5.18
23 24 5.452302 CACGTTATGCACTTTATTTAGCTGC 59.548 40.000 0.00 0.00 0.00 5.25
24 25 5.965334 CCACGTTATGCACTTTATTTAGCTG 59.035 40.000 0.00 0.00 0.00 4.24
25 26 5.065988 CCCACGTTATGCACTTTATTTAGCT 59.934 40.000 0.00 0.00 0.00 3.32
26 27 5.270853 CCCACGTTATGCACTTTATTTAGC 58.729 41.667 0.00 0.00 0.00 3.09
27 28 5.355910 ACCCCACGTTATGCACTTTATTTAG 59.644 40.000 0.00 0.00 0.00 1.85
28 29 5.124138 CACCCCACGTTATGCACTTTATTTA 59.876 40.000 0.00 0.00 0.00 1.40
29 30 4.082463 CACCCCACGTTATGCACTTTATTT 60.082 41.667 0.00 0.00 0.00 1.40
30 31 3.442273 CACCCCACGTTATGCACTTTATT 59.558 43.478 0.00 0.00 0.00 1.40
31 32 3.013921 CACCCCACGTTATGCACTTTAT 58.986 45.455 0.00 0.00 0.00 1.40
32 33 2.224572 ACACCCCACGTTATGCACTTTA 60.225 45.455 0.00 0.00 0.00 1.85
33 34 1.243902 CACCCCACGTTATGCACTTT 58.756 50.000 0.00 0.00 0.00 2.66
34 35 0.109723 ACACCCCACGTTATGCACTT 59.890 50.000 0.00 0.00 0.00 3.16
35 36 0.321298 GACACCCCACGTTATGCACT 60.321 55.000 0.00 0.00 0.00 4.40
36 37 0.604243 TGACACCCCACGTTATGCAC 60.604 55.000 0.00 0.00 0.00 4.57
37 38 0.321210 CTGACACCCCACGTTATGCA 60.321 55.000 0.00 0.00 0.00 3.96
38 39 1.024579 CCTGACACCCCACGTTATGC 61.025 60.000 0.00 0.00 0.00 3.14
39 40 0.323629 ACCTGACACCCCACGTTATG 59.676 55.000 0.00 0.00 0.00 1.90
40 41 1.061546 AACCTGACACCCCACGTTAT 58.938 50.000 0.00 0.00 0.00 1.89
41 42 0.838608 AAACCTGACACCCCACGTTA 59.161 50.000 0.00 0.00 0.00 3.18
42 43 0.838608 TAAACCTGACACCCCACGTT 59.161 50.000 0.00 0.00 0.00 3.99
43 44 0.838608 TTAAACCTGACACCCCACGT 59.161 50.000 0.00 0.00 0.00 4.49
44 45 2.194201 ATTAAACCTGACACCCCACG 57.806 50.000 0.00 0.00 0.00 4.94
45 46 4.659115 AGTAATTAAACCTGACACCCCAC 58.341 43.478 0.00 0.00 0.00 4.61
46 47 5.548836 ACTAGTAATTAAACCTGACACCCCA 59.451 40.000 0.00 0.00 0.00 4.96
47 48 6.058553 ACTAGTAATTAAACCTGACACCCC 57.941 41.667 0.00 0.00 0.00 4.95
48 49 7.845037 ACTACTAGTAATTAAACCTGACACCC 58.155 38.462 3.76 0.00 0.00 4.61
49 50 9.363763 GAACTACTAGTAATTAAACCTGACACC 57.636 37.037 3.76 0.00 0.00 4.16
50 51 9.918630 TGAACTACTAGTAATTAAACCTGACAC 57.081 33.333 3.76 0.00 0.00 3.67
64 65 9.653287 CTGGACATGAAAAATGAACTACTAGTA 57.347 33.333 0.00 1.89 0.00 1.82
65 66 8.375506 TCTGGACATGAAAAATGAACTACTAGT 58.624 33.333 0.00 0.00 0.00 2.57
66 67 8.777865 TCTGGACATGAAAAATGAACTACTAG 57.222 34.615 0.00 0.00 0.00 2.57
67 68 9.166173 CATCTGGACATGAAAAATGAACTACTA 57.834 33.333 0.00 0.00 0.00 1.82
68 69 7.884877 TCATCTGGACATGAAAAATGAACTACT 59.115 33.333 0.00 0.00 29.41 2.57
69 70 8.044060 TCATCTGGACATGAAAAATGAACTAC 57.956 34.615 0.00 0.00 29.41 2.73
70 71 8.634335 TTCATCTGGACATGAAAAATGAACTA 57.366 30.769 0.00 0.00 39.37 2.24
71 72 7.528996 TTCATCTGGACATGAAAAATGAACT 57.471 32.000 0.00 0.00 39.37 3.01
80 81 6.862608 CGTTCAAAATTTCATCTGGACATGAA 59.137 34.615 0.00 0.00 40.36 2.57
81 82 6.206438 TCGTTCAAAATTTCATCTGGACATGA 59.794 34.615 0.00 0.00 0.00 3.07
82 83 6.380995 TCGTTCAAAATTTCATCTGGACATG 58.619 36.000 0.00 0.00 0.00 3.21
83 84 6.573664 TCGTTCAAAATTTCATCTGGACAT 57.426 33.333 0.00 0.00 0.00 3.06
84 85 5.562696 GCTCGTTCAAAATTTCATCTGGACA 60.563 40.000 0.00 0.00 0.00 4.02
85 86 4.853743 GCTCGTTCAAAATTTCATCTGGAC 59.146 41.667 0.00 0.00 0.00 4.02
86 87 4.378356 CGCTCGTTCAAAATTTCATCTGGA 60.378 41.667 0.00 0.00 0.00 3.86
87 88 3.848019 CGCTCGTTCAAAATTTCATCTGG 59.152 43.478 0.00 0.00 0.00 3.86
88 89 3.848019 CCGCTCGTTCAAAATTTCATCTG 59.152 43.478 0.00 0.00 0.00 2.90
89 90 3.670627 GCCGCTCGTTCAAAATTTCATCT 60.671 43.478 0.00 0.00 0.00 2.90
90 91 2.594214 GCCGCTCGTTCAAAATTTCATC 59.406 45.455 0.00 0.00 0.00 2.92
91 92 2.595386 GCCGCTCGTTCAAAATTTCAT 58.405 42.857 0.00 0.00 0.00 2.57
92 93 1.661743 CGCCGCTCGTTCAAAATTTCA 60.662 47.619 0.00 0.00 0.00 2.69
93 94 0.974836 CGCCGCTCGTTCAAAATTTC 59.025 50.000 0.00 0.00 0.00 2.17
94 95 1.001745 GCGCCGCTCGTTCAAAATTT 61.002 50.000 0.00 0.00 41.07 1.82
95 96 1.442017 GCGCCGCTCGTTCAAAATT 60.442 52.632 0.00 0.00 41.07 1.82
96 97 2.175811 GCGCCGCTCGTTCAAAAT 59.824 55.556 0.00 0.00 41.07 1.82
97 98 4.362946 CGCGCCGCTCGTTCAAAA 62.363 61.111 7.78 0.00 41.07 2.44
105 106 4.807039 TTAGTTCCCGCGCCGCTC 62.807 66.667 7.78 0.00 0.00 5.03
106 107 2.300850 TAATTAGTTCCCGCGCCGCT 62.301 55.000 7.78 0.00 0.00 5.52
107 108 1.430707 TTAATTAGTTCCCGCGCCGC 61.431 55.000 0.00 0.00 0.00 6.53
108 109 0.580104 CTTAATTAGTTCCCGCGCCG 59.420 55.000 0.00 0.00 0.00 6.46
109 110 1.944032 TCTTAATTAGTTCCCGCGCC 58.056 50.000 0.00 0.00 0.00 6.53
110 111 2.934553 ACTTCTTAATTAGTTCCCGCGC 59.065 45.455 0.00 0.00 0.00 6.86
111 112 4.390909 ACAACTTCTTAATTAGTTCCCGCG 59.609 41.667 0.00 0.00 32.50 6.46
112 113 5.874895 ACAACTTCTTAATTAGTTCCCGC 57.125 39.130 0.69 0.00 32.50 6.13
113 114 9.080915 GTAGTACAACTTCTTAATTAGTTCCCG 57.919 37.037 0.00 0.00 32.50 5.14
114 115 9.933723 TGTAGTACAACTTCTTAATTAGTTCCC 57.066 33.333 0.00 0.00 32.50 3.97
122 123 9.886132 CCCTGTTATGTAGTACAACTTCTTAAT 57.114 33.333 7.16 0.00 0.00 1.40
123 124 7.820872 GCCCTGTTATGTAGTACAACTTCTTAA 59.179 37.037 7.16 0.00 0.00 1.85
124 125 7.179694 AGCCCTGTTATGTAGTACAACTTCTTA 59.820 37.037 7.16 0.00 0.00 2.10
125 126 6.013639 AGCCCTGTTATGTAGTACAACTTCTT 60.014 38.462 7.16 0.00 0.00 2.52
126 127 5.484290 AGCCCTGTTATGTAGTACAACTTCT 59.516 40.000 7.16 0.00 0.00 2.85
127 128 5.731591 AGCCCTGTTATGTAGTACAACTTC 58.268 41.667 7.16 0.00 0.00 3.01
128 129 5.757099 AGCCCTGTTATGTAGTACAACTT 57.243 39.130 7.16 0.00 0.00 2.66
129 130 5.163437 GCTAGCCCTGTTATGTAGTACAACT 60.163 44.000 7.16 0.00 0.00 3.16
130 131 5.048507 GCTAGCCCTGTTATGTAGTACAAC 58.951 45.833 7.16 2.58 0.00 3.32
131 132 4.712829 TGCTAGCCCTGTTATGTAGTACAA 59.287 41.667 13.29 0.00 0.00 2.41
132 133 4.283337 TGCTAGCCCTGTTATGTAGTACA 58.717 43.478 13.29 5.24 0.00 2.90
133 134 4.796618 GCTGCTAGCCCTGTTATGTAGTAC 60.797 50.000 13.29 0.00 34.48 2.73
134 135 3.321111 GCTGCTAGCCCTGTTATGTAGTA 59.679 47.826 13.29 0.00 34.48 1.82
135 136 2.103263 GCTGCTAGCCCTGTTATGTAGT 59.897 50.000 13.29 0.00 34.48 2.73
136 137 2.366916 AGCTGCTAGCCCTGTTATGTAG 59.633 50.000 13.29 0.00 43.77 2.74
137 138 2.103094 CAGCTGCTAGCCCTGTTATGTA 59.897 50.000 13.29 0.00 43.77 2.29
138 139 1.134280 CAGCTGCTAGCCCTGTTATGT 60.134 52.381 13.29 0.00 43.77 2.29
139 140 1.134280 ACAGCTGCTAGCCCTGTTATG 60.134 52.381 24.41 11.97 43.77 1.90
140 141 1.134280 CACAGCTGCTAGCCCTGTTAT 60.134 52.381 26.41 10.43 43.77 1.89
141 142 0.250234 CACAGCTGCTAGCCCTGTTA 59.750 55.000 26.41 3.08 43.77 2.41
142 143 1.002868 CACAGCTGCTAGCCCTGTT 60.003 57.895 26.41 14.57 43.77 3.16
143 144 1.897225 CTCACAGCTGCTAGCCCTGT 61.897 60.000 24.41 24.41 43.77 4.00
144 145 1.153409 CTCACAGCTGCTAGCCCTG 60.153 63.158 23.37 23.37 43.77 4.45
145 146 2.365586 CCTCACAGCTGCTAGCCCT 61.366 63.158 15.27 5.67 43.77 5.19
146 147 2.188994 CCTCACAGCTGCTAGCCC 59.811 66.667 15.27 3.06 43.77 5.19
147 148 1.023513 CAACCTCACAGCTGCTAGCC 61.024 60.000 15.27 0.00 43.77 3.93
148 149 0.036952 TCAACCTCACAGCTGCTAGC 60.037 55.000 15.27 8.10 42.84 3.42
149 150 2.462456 TTCAACCTCACAGCTGCTAG 57.538 50.000 15.27 11.32 0.00 3.42
150 151 2.928801 TTTCAACCTCACAGCTGCTA 57.071 45.000 15.27 0.21 0.00 3.49
151 152 2.283145 ATTTCAACCTCACAGCTGCT 57.717 45.000 15.27 0.00 0.00 4.24
152 153 4.708726 ATAATTTCAACCTCACAGCTGC 57.291 40.909 15.27 0.00 0.00 5.25
153 154 8.044060 TCTAAATAATTTCAACCTCACAGCTG 57.956 34.615 13.48 13.48 0.00 4.24
154 155 8.814038 ATCTAAATAATTTCAACCTCACAGCT 57.186 30.769 0.00 0.00 0.00 4.24
155 156 8.677300 TGATCTAAATAATTTCAACCTCACAGC 58.323 33.333 0.00 0.00 0.00 4.40
205 206 1.723870 GAGGCTAGGTGCATTTGCG 59.276 57.895 0.00 0.00 45.83 4.85
206 207 1.723870 CGAGGCTAGGTGCATTTGC 59.276 57.895 0.00 0.00 45.15 3.68
207 208 1.718757 GGCGAGGCTAGGTGCATTTG 61.719 60.000 0.00 0.00 45.15 2.32
208 209 1.452108 GGCGAGGCTAGGTGCATTT 60.452 57.895 0.00 0.00 45.15 2.32
209 210 1.048724 TAGGCGAGGCTAGGTGCATT 61.049 55.000 2.04 0.00 45.15 3.56
215 534 1.904378 GGAGGTAGGCGAGGCTAGG 60.904 68.421 6.63 0.00 0.00 3.02
243 562 1.565305 GATGGTGATCGAGCTGACAC 58.435 55.000 0.90 1.91 0.00 3.67
253 572 2.511373 TGCACGCCGATGGTGATC 60.511 61.111 2.95 0.00 37.60 2.92
288 607 2.493675 TGATCAAACTCCTCCTCGACAG 59.506 50.000 0.00 0.00 0.00 3.51
294 613 4.826274 TTCGATTGATCAAACTCCTCCT 57.174 40.909 13.09 0.00 0.00 3.69
295 614 4.210120 CGATTCGATTGATCAAACTCCTCC 59.790 45.833 13.09 0.00 0.00 4.30
296 615 5.043903 TCGATTCGATTGATCAAACTCCTC 58.956 41.667 13.09 4.07 0.00 3.71
301 620 5.006649 TCCACATCGATTCGATTGATCAAAC 59.993 40.000 18.52 9.07 44.59 2.93
305 624 4.384247 GTCTCCACATCGATTCGATTGATC 59.616 45.833 18.52 8.44 44.59 2.92
313 632 3.868077 CCAAGAAGTCTCCACATCGATTC 59.132 47.826 0.00 0.00 0.00 2.52
314 633 3.515502 TCCAAGAAGTCTCCACATCGATT 59.484 43.478 0.00 0.00 0.00 3.34
322 641 2.507886 TGGTTTGTCCAAGAAGTCTCCA 59.492 45.455 0.00 0.00 44.12 3.86
362 681 9.542462 CCTCAATTCAGAAAATAATACTCCGTA 57.458 33.333 0.00 0.00 0.00 4.02
363 682 7.499232 CCCTCAATTCAGAAAATAATACTCCGT 59.501 37.037 0.00 0.00 0.00 4.69
364 683 7.041098 CCCCTCAATTCAGAAAATAATACTCCG 60.041 40.741 0.00 0.00 0.00 4.63
365 684 7.998964 TCCCCTCAATTCAGAAAATAATACTCC 59.001 37.037 0.00 0.00 0.00 3.85
366 685 8.841300 GTCCCCTCAATTCAGAAAATAATACTC 58.159 37.037 0.00 0.00 0.00 2.59
367 686 7.780271 GGTCCCCTCAATTCAGAAAATAATACT 59.220 37.037 0.00 0.00 0.00 2.12
368 687 7.559897 TGGTCCCCTCAATTCAGAAAATAATAC 59.440 37.037 0.00 0.00 0.00 1.89
369 688 7.647827 TGGTCCCCTCAATTCAGAAAATAATA 58.352 34.615 0.00 0.00 0.00 0.98
370 689 6.502138 TGGTCCCCTCAATTCAGAAAATAAT 58.498 36.000 0.00 0.00 0.00 1.28
372 691 5.528600 TGGTCCCCTCAATTCAGAAAATA 57.471 39.130 0.00 0.00 0.00 1.40
373 692 4.402616 TGGTCCCCTCAATTCAGAAAAT 57.597 40.909 0.00 0.00 0.00 1.82
374 693 3.893753 TGGTCCCCTCAATTCAGAAAA 57.106 42.857 0.00 0.00 0.00 2.29
376 695 3.893753 TTTGGTCCCCTCAATTCAGAA 57.106 42.857 0.00 0.00 0.00 3.02
377 696 3.893753 TTTTGGTCCCCTCAATTCAGA 57.106 42.857 0.00 0.00 0.00 3.27
379 698 3.895041 GAGTTTTTGGTCCCCTCAATTCA 59.105 43.478 0.00 0.00 0.00 2.57
380 699 3.895041 TGAGTTTTTGGTCCCCTCAATTC 59.105 43.478 0.00 0.00 0.00 2.17
384 703 2.445145 TGATGAGTTTTTGGTCCCCTCA 59.555 45.455 0.00 0.00 36.67 3.86
385 704 3.084786 CTGATGAGTTTTTGGTCCCCTC 58.915 50.000 0.00 0.00 0.00 4.30
386 705 2.447047 ACTGATGAGTTTTTGGTCCCCT 59.553 45.455 0.00 0.00 0.00 4.79
387 706 2.876581 ACTGATGAGTTTTTGGTCCCC 58.123 47.619 0.00 0.00 0.00 4.81
389 708 6.228258 TGTAGTACTGATGAGTTTTTGGTCC 58.772 40.000 5.39 0.00 33.21 4.46
390 709 6.929606 ACTGTAGTACTGATGAGTTTTTGGTC 59.070 38.462 13.54 0.00 33.21 4.02
391 710 6.827727 ACTGTAGTACTGATGAGTTTTTGGT 58.172 36.000 13.54 0.00 33.21 3.67
393 712 9.046296 AGAAACTGTAGTACTGATGAGTTTTTG 57.954 33.333 13.54 0.00 34.59 2.44
395 714 7.171678 GCAGAAACTGTAGTACTGATGAGTTTT 59.828 37.037 13.54 3.21 34.59 2.43
396 715 6.647067 GCAGAAACTGTAGTACTGATGAGTTT 59.353 38.462 13.54 16.75 36.58 2.66
397 716 6.015010 AGCAGAAACTGTAGTACTGATGAGTT 60.015 38.462 13.54 5.78 35.87 3.01
398 717 5.478679 AGCAGAAACTGTAGTACTGATGAGT 59.521 40.000 13.54 0.00 35.87 3.41
399 718 5.804473 CAGCAGAAACTGTAGTACTGATGAG 59.196 44.000 21.38 0.00 43.96 2.90
414 733 0.027586 AACGTTCGCACAGCAGAAAC 59.972 50.000 0.00 0.00 0.00 2.78
415 734 1.573026 TAACGTTCGCACAGCAGAAA 58.427 45.000 2.82 0.00 0.00 2.52
416 735 1.259507 GTTAACGTTCGCACAGCAGAA 59.740 47.619 2.82 0.00 0.00 3.02
417 736 0.856641 GTTAACGTTCGCACAGCAGA 59.143 50.000 2.82 0.00 0.00 4.26
418 737 0.448861 CGTTAACGTTCGCACAGCAG 60.449 55.000 19.75 0.00 34.11 4.24
419 738 1.560770 CGTTAACGTTCGCACAGCA 59.439 52.632 19.75 0.00 34.11 4.41
420 739 4.392945 CGTTAACGTTCGCACAGC 57.607 55.556 19.75 0.00 34.11 4.40
451 770 1.305201 AGTGTTTTAGCACGGTGTGG 58.695 50.000 10.24 0.00 43.61 4.17
455 774 1.944032 ACGAAGTGTTTTAGCACGGT 58.056 45.000 0.00 0.00 42.51 4.83
481 837 0.108138 ATGAGTGGAAGTGCGCCTAC 60.108 55.000 4.18 0.00 0.00 3.18
484 840 0.955428 TGAATGAGTGGAAGTGCGCC 60.955 55.000 4.18 0.00 0.00 6.53
485 841 1.063174 GATGAATGAGTGGAAGTGCGC 59.937 52.381 0.00 0.00 0.00 6.09
486 842 1.667724 GGATGAATGAGTGGAAGTGCG 59.332 52.381 0.00 0.00 0.00 5.34
494 850 2.546795 GGCTACGAGGGATGAATGAGTG 60.547 54.545 0.00 0.00 0.00 3.51
496 852 1.967066 AGGCTACGAGGGATGAATGAG 59.033 52.381 0.00 0.00 0.00 2.90
529 885 0.872021 GCGTGAGACCTATCGGCTTG 60.872 60.000 0.00 0.00 0.00 4.01
540 896 1.079750 GTGGAGAAGGGCGTGAGAC 60.080 63.158 0.00 0.00 39.70 3.36
541 897 2.283529 GGTGGAGAAGGGCGTGAGA 61.284 63.158 0.00 0.00 0.00 3.27
543 899 3.691342 CGGTGGAGAAGGGCGTGA 61.691 66.667 0.00 0.00 0.00 4.35
544 900 2.642254 TACGGTGGAGAAGGGCGTG 61.642 63.158 0.00 0.00 0.00 5.34
545 901 2.283388 TACGGTGGAGAAGGGCGT 60.283 61.111 0.00 0.00 0.00 5.68
548 904 2.364780 GGGGTACGGTGGAGAAGGG 61.365 68.421 0.00 0.00 0.00 3.95
549 905 1.305887 AGGGGTACGGTGGAGAAGG 60.306 63.158 0.00 0.00 0.00 3.46
550 906 1.898154 CAGGGGTACGGTGGAGAAG 59.102 63.158 0.00 0.00 0.00 2.85
551 907 2.288025 GCAGGGGTACGGTGGAGAA 61.288 63.158 0.00 0.00 0.00 2.87
552 908 2.682494 GCAGGGGTACGGTGGAGA 60.682 66.667 0.00 0.00 0.00 3.71
553 909 3.782443 GGCAGGGGTACGGTGGAG 61.782 72.222 0.00 0.00 0.00 3.86
560 916 4.091939 GGTGACGGGCAGGGGTAC 62.092 72.222 0.00 0.00 0.00 3.34
636 1013 2.484203 GAAGAGCGTCGCGGTAGT 59.516 61.111 12.30 0.00 37.83 2.73
637 1014 2.278013 GGAAGAGCGTCGCGGTAG 60.278 66.667 12.30 0.00 37.83 3.18
640 1017 4.856607 GAGGGAAGAGCGTCGCGG 62.857 72.222 12.30 0.00 35.70 6.46
642 1019 3.743091 CTCGAGGGAAGAGCGTCGC 62.743 68.421 9.80 9.80 32.41 5.19
643 1020 2.405594 CTCGAGGGAAGAGCGTCG 59.594 66.667 3.91 0.00 0.00 5.12
644 1021 0.747283 TACCTCGAGGGAAGAGCGTC 60.747 60.000 34.04 0.00 40.27 5.19
645 1022 0.748729 CTACCTCGAGGGAAGAGCGT 60.749 60.000 34.04 13.94 40.27 5.07
646 1023 0.464013 TCTACCTCGAGGGAAGAGCG 60.464 60.000 34.04 14.83 40.27 5.03
647 1024 1.314730 CTCTACCTCGAGGGAAGAGC 58.685 60.000 34.66 0.00 40.29 4.09
658 1104 2.748388 TCAGGCCTTTACCTCTACCTC 58.252 52.381 0.00 0.00 38.26 3.85
664 1110 4.595350 AGATAAGGATCAGGCCTTTACCTC 59.405 45.833 18.09 9.17 45.85 3.85
674 1128 4.800249 GCTGCTCAAGAGATAAGGATCAGG 60.800 50.000 0.32 0.00 34.17 3.86
691 1145 0.165511 CAAGCTTGTTCTCGCTGCTC 59.834 55.000 18.65 0.00 36.45 4.26
694 1148 0.795085 CTCCAAGCTTGTTCTCGCTG 59.205 55.000 24.35 7.18 36.45 5.18
724 1178 1.180456 CCAGCAAGCATGGTTGGTCA 61.180 55.000 32.84 0.00 35.99 4.02
725 1179 1.588082 CCAGCAAGCATGGTTGGTC 59.412 57.895 32.84 19.95 35.99 4.02
730 1184 0.625316 TCATACCCAGCAAGCATGGT 59.375 50.000 9.86 9.86 35.96 3.55
731 1185 1.027357 GTCATACCCAGCAAGCATGG 58.973 55.000 0.00 0.00 37.58 3.66
733 1187 0.921896 AGGTCATACCCAGCAAGCAT 59.078 50.000 0.00 0.00 39.75 3.79
734 1188 0.253044 GAGGTCATACCCAGCAAGCA 59.747 55.000 0.00 0.00 39.75 3.91
735 1189 0.464554 GGAGGTCATACCCAGCAAGC 60.465 60.000 0.00 0.00 39.75 4.01
736 1190 0.181350 GGGAGGTCATACCCAGCAAG 59.819 60.000 0.00 0.00 44.96 4.01
737 1191 2.307153 GGGAGGTCATACCCAGCAA 58.693 57.895 0.00 0.00 44.96 3.91
738 1192 4.066614 GGGAGGTCATACCCAGCA 57.933 61.111 0.00 0.00 44.96 4.41
742 1196 3.053619 ACAGAAAATGGGAGGTCATACCC 60.054 47.826 0.00 0.00 45.74 3.69
743 1197 4.236527 ACAGAAAATGGGAGGTCATACC 57.763 45.455 0.00 0.00 38.99 2.73
746 1200 4.082125 GTCAACAGAAAATGGGAGGTCAT 58.918 43.478 0.00 0.00 0.00 3.06
750 1204 4.935352 TTTGTCAACAGAAAATGGGAGG 57.065 40.909 0.00 0.00 0.00 4.30
756 1210 5.177326 TGCAAGCTTTTGTCAACAGAAAAT 58.823 33.333 0.00 0.00 0.00 1.82
766 1220 4.708726 AGACCATATGCAAGCTTTTGTC 57.291 40.909 0.00 0.00 0.00 3.18
769 1223 5.990120 AGAAAGACCATATGCAAGCTTTT 57.010 34.783 0.00 0.00 0.00 2.27
783 1237 0.246635 TGGAGCGCACTAGAAAGACC 59.753 55.000 11.47 0.00 0.00 3.85
784 1238 1.351153 GTGGAGCGCACTAGAAAGAC 58.649 55.000 11.47 0.00 0.00 3.01
788 1242 2.571757 CGGTGGAGCGCACTAGAA 59.428 61.111 11.47 0.00 0.00 2.10
821 1275 0.103390 GCTAGGCGAGTTTCCTCCTC 59.897 60.000 0.00 0.00 35.21 3.71
840 1294 1.878522 CCACGCGGCAACTAGCTAG 60.879 63.158 19.44 19.44 44.79 3.42
841 1295 2.183300 CCACGCGGCAACTAGCTA 59.817 61.111 12.47 0.00 44.79 3.32
842 1296 4.760047 CCCACGCGGCAACTAGCT 62.760 66.667 12.47 0.00 44.79 3.32
844 1298 2.813908 GACCCACGCGGCAACTAG 60.814 66.667 12.47 0.00 33.26 2.57
845 1299 4.728102 CGACCCACGCGGCAACTA 62.728 66.667 12.47 0.00 33.26 2.24
858 1312 3.557290 GGGGGCTATGGGTCGACC 61.557 72.222 27.04 27.04 40.81 4.79
889 1343 0.106619 AGCTCACCTACCCTAGTCGG 60.107 60.000 0.00 0.00 34.96 4.79
900 1354 4.202398 TGAGAAAACAAGATGAGCTCACCT 60.202 41.667 20.97 13.02 0.00 4.00
901 1355 4.067896 TGAGAAAACAAGATGAGCTCACC 58.932 43.478 20.97 10.07 0.00 4.02
902 1356 5.876612 ATGAGAAAACAAGATGAGCTCAC 57.123 39.130 20.97 13.11 34.22 3.51
903 1357 6.236409 AGAATGAGAAAACAAGATGAGCTCA 58.764 36.000 20.79 20.79 35.65 4.26
912 1366 6.718454 ATCAGTCGAGAATGAGAAAACAAG 57.282 37.500 9.12 0.00 38.88 3.16
1090 2093 1.028868 GCTGTTAGCTGCTTGGAGGG 61.029 60.000 7.79 0.00 38.45 4.30
1103 2112 4.536065 CGTTGCAGATTTTTCAGCTGTTA 58.464 39.130 14.67 0.00 32.39 2.41
1105 2114 2.287788 CCGTTGCAGATTTTTCAGCTGT 60.288 45.455 14.67 0.00 32.39 4.40
1113 2122 1.206578 CGACGCCGTTGCAGATTTT 59.793 52.632 0.00 0.00 37.32 1.82
1131 2140 0.247185 CACCATGGATGCCAAACACC 59.753 55.000 21.47 0.00 36.95 4.16
1168 2177 3.448301 TGGGCAAGATCCATGTTTGATTC 59.552 43.478 0.00 0.00 0.00 2.52
1260 2269 1.035923 TCTGCCCGAGATCATCACTC 58.964 55.000 0.00 0.00 0.00 3.51
1265 2274 0.683973 GGATGTCTGCCCGAGATCAT 59.316 55.000 10.88 1.72 42.58 2.45
1312 2321 4.803588 GCATGGGAATTTGGTTGTGACATT 60.804 41.667 0.00 0.00 0.00 2.71
1386 2395 2.771089 TGGAACTGCTGAACTAAGCTG 58.229 47.619 0.00 2.05 43.90 4.24
1395 2404 4.284829 TGTTGTATGATGGAACTGCTGA 57.715 40.909 0.00 0.00 0.00 4.26
1396 2405 5.375417 TTTGTTGTATGATGGAACTGCTG 57.625 39.130 0.00 0.00 0.00 4.41
1413 2422 4.142534 CCATCTTCTCGTGCATCATTTGTT 60.143 41.667 0.00 0.00 0.00 2.83
1418 2427 2.800985 CGTCCATCTTCTCGTGCATCAT 60.801 50.000 0.00 0.00 0.00 2.45
1419 2428 1.469767 CGTCCATCTTCTCGTGCATCA 60.470 52.381 0.00 0.00 0.00 3.07
1421 2430 0.817654 TCGTCCATCTTCTCGTGCAT 59.182 50.000 0.00 0.00 0.00 3.96
1425 2434 2.712709 TCTTCTCGTCCATCTTCTCGT 58.287 47.619 0.00 0.00 0.00 4.18
1426 2435 3.626977 CATCTTCTCGTCCATCTTCTCG 58.373 50.000 0.00 0.00 0.00 4.04
1427 2436 3.380142 GCATCTTCTCGTCCATCTTCTC 58.620 50.000 0.00 0.00 0.00 2.87
1428 2437 2.102252 GGCATCTTCTCGTCCATCTTCT 59.898 50.000 0.00 0.00 0.00 2.85
1429 2438 2.478831 GGCATCTTCTCGTCCATCTTC 58.521 52.381 0.00 0.00 0.00 2.87
1430 2439 1.202463 CGGCATCTTCTCGTCCATCTT 60.202 52.381 0.00 0.00 0.00 2.40
1431 2440 0.387202 CGGCATCTTCTCGTCCATCT 59.613 55.000 0.00 0.00 0.00 2.90
1432 2441 1.218230 GCGGCATCTTCTCGTCCATC 61.218 60.000 0.00 0.00 0.00 3.51
1439 2453 1.023513 AGCTGTTGCGGCATCTTCTC 61.024 55.000 2.28 0.00 45.42 2.87
1477 2493 6.450545 CAGATATCTCTTCCGCTTCACATAA 58.549 40.000 1.03 0.00 0.00 1.90
1486 2502 3.126831 CACAACCAGATATCTCTTCCGC 58.873 50.000 1.03 0.00 0.00 5.54
1508 2524 3.069586 TCGATGGTGGATAGGTCATTGAC 59.930 47.826 8.34 8.34 0.00 3.18
1542 2558 0.038343 CCCATGTTGTTTTCTGGCCG 60.038 55.000 0.00 0.00 0.00 6.13
1550 2580 1.786937 TTCTGCACCCCATGTTGTTT 58.213 45.000 0.00 0.00 0.00 2.83
1805 2837 9.722184 AAAACTAGAGGGTAAAAGATGTAGTTC 57.278 33.333 0.00 0.00 30.91 3.01
1808 2840 9.298774 CGTAAAACTAGAGGGTAAAAGATGTAG 57.701 37.037 0.00 0.00 0.00 2.74
1812 2844 8.996271 CAAACGTAAAACTAGAGGGTAAAAGAT 58.004 33.333 0.00 0.00 0.00 2.40
1813 2845 7.986889 ACAAACGTAAAACTAGAGGGTAAAAGA 59.013 33.333 0.00 0.00 0.00 2.52
1814 2846 8.066000 CACAAACGTAAAACTAGAGGGTAAAAG 58.934 37.037 0.00 0.00 0.00 2.27
1822 2859 6.780706 ATGGTCACAAACGTAAAACTAGAG 57.219 37.500 0.00 0.00 0.00 2.43
1823 2860 7.556733 AAATGGTCACAAACGTAAAACTAGA 57.443 32.000 0.00 0.00 0.00 2.43
1826 2863 7.488792 GGTAAAAATGGTCACAAACGTAAAACT 59.511 33.333 0.00 0.00 0.00 2.66
1833 2870 3.068307 TGGGGTAAAAATGGTCACAAACG 59.932 43.478 0.00 0.00 0.00 3.60
1851 2888 5.828299 TCGCTAAAATCTGTTAAATGGGG 57.172 39.130 0.00 0.00 0.00 4.96
1877 2914 1.689273 GGGGTGTAATTTGTGGCACAA 59.311 47.619 28.09 28.09 44.16 3.33
1895 2932 1.532604 GCAGGAAAACGGGGAAAGGG 61.533 60.000 0.00 0.00 0.00 3.95
1897 2934 0.598065 CAGCAGGAAAACGGGGAAAG 59.402 55.000 0.00 0.00 0.00 2.62
1901 2938 1.073199 AGTCAGCAGGAAAACGGGG 59.927 57.895 0.00 0.00 0.00 5.73
1903 2940 1.798813 GTACAGTCAGCAGGAAAACGG 59.201 52.381 0.00 0.00 0.00 4.44
1905 2942 2.808543 CAGGTACAGTCAGCAGGAAAAC 59.191 50.000 0.00 0.00 0.00 2.43
1931 2968 5.135330 CCGAAAGCGAACTAAACTGTTAAC 58.865 41.667 0.00 0.00 40.82 2.01
1933 2970 4.370917 ACCGAAAGCGAACTAAACTGTTA 58.629 39.130 0.00 0.00 40.82 2.41
1934 2971 3.200483 ACCGAAAGCGAACTAAACTGTT 58.800 40.909 0.00 0.00 40.82 3.16
1937 2974 4.260907 GGAAAACCGAAAGCGAACTAAACT 60.261 41.667 0.00 0.00 40.82 2.66
1938 2975 3.970610 GGAAAACCGAAAGCGAACTAAAC 59.029 43.478 0.00 0.00 40.82 2.01
1946 2983 1.535462 ACAGATGGAAAACCGAAAGCG 59.465 47.619 0.00 0.00 37.24 4.68
1969 3006 7.721842 TGTACCAGTTTGGATTGATTCTGTAAA 59.278 33.333 1.40 0.00 40.96 2.01
1991 3028 2.936050 GTTGGTGTTACAGCGTGTAC 57.064 50.000 10.02 2.27 31.69 2.90
2272 3309 9.358872 CACGAGTGTGCATATCATATACTTTAT 57.641 33.333 0.00 0.00 39.67 1.40
2273 3310 8.742554 CACGAGTGTGCATATCATATACTTTA 57.257 34.615 0.00 0.00 39.67 1.85
2274 3311 7.643528 CACGAGTGTGCATATCATATACTTT 57.356 36.000 0.00 0.00 39.67 2.66
2309 3346 4.091453 GTGCAGCGTGTACCATATTTTT 57.909 40.909 0.00 0.00 0.00 1.94
2310 3347 3.757745 GTGCAGCGTGTACCATATTTT 57.242 42.857 0.00 0.00 0.00 1.82
2318 3355 0.389948 AAGCTAGGTGCAGCGTGTAC 60.390 55.000 10.78 0.00 46.52 2.90
2319 3356 1.134367 CTAAGCTAGGTGCAGCGTGTA 59.866 52.381 10.78 0.00 46.52 2.90
2320 3357 0.108615 CTAAGCTAGGTGCAGCGTGT 60.109 55.000 10.78 0.00 46.52 4.49
2321 3358 1.424493 GCTAAGCTAGGTGCAGCGTG 61.424 60.000 10.78 8.47 46.52 5.34
2322 3359 1.153549 GCTAAGCTAGGTGCAGCGT 60.154 57.895 10.78 0.00 46.52 5.07
2323 3360 1.884926 GGCTAAGCTAGGTGCAGCG 60.885 63.158 17.70 0.00 46.52 5.18
2324 3361 0.753262 TAGGCTAAGCTAGGTGCAGC 59.247 55.000 16.62 16.62 45.94 5.25
2325 3362 1.342819 CCTAGGCTAAGCTAGGTGCAG 59.657 57.143 0.00 3.51 45.94 4.41
2326 3363 1.414158 CCTAGGCTAAGCTAGGTGCA 58.586 55.000 0.00 0.00 45.94 4.57
2327 3364 0.034198 GCCTAGGCTAAGCTAGGTGC 59.966 60.000 27.17 0.00 43.38 5.01
2328 3365 0.315568 CGCCTAGGCTAAGCTAGGTG 59.684 60.000 30.55 12.41 44.22 4.00
2329 3366 0.185416 TCGCCTAGGCTAAGCTAGGT 59.815 55.000 30.55 0.00 43.38 3.08
2330 3367 1.000052 GTTCGCCTAGGCTAAGCTAGG 60.000 57.143 30.55 13.07 44.08 3.02
2331 3368 1.000052 GGTTCGCCTAGGCTAAGCTAG 60.000 57.143 31.98 17.11 39.89 3.42
2332 3369 1.038280 GGTTCGCCTAGGCTAAGCTA 58.962 55.000 31.98 7.97 39.89 3.32
2333 3370 1.823976 GGTTCGCCTAGGCTAAGCT 59.176 57.895 31.98 0.00 39.89 3.74
2334 3371 4.440181 GGTTCGCCTAGGCTAAGC 57.560 61.111 27.94 27.94 37.20 3.09
2346 3383 3.636231 TGGGGTGAGGCAGGTTCG 61.636 66.667 0.00 0.00 0.00 3.95
2347 3384 2.034221 GTGGGGTGAGGCAGGTTC 59.966 66.667 0.00 0.00 0.00 3.62
2348 3385 3.580319 GGTGGGGTGAGGCAGGTT 61.580 66.667 0.00 0.00 0.00 3.50
2351 3388 2.000701 TATGGGTGGGGTGAGGCAG 61.001 63.158 0.00 0.00 0.00 4.85
2352 3389 2.126142 TATGGGTGGGGTGAGGCA 59.874 61.111 0.00 0.00 0.00 4.75
2353 3390 2.595655 GTATGGGTGGGGTGAGGC 59.404 66.667 0.00 0.00 0.00 4.70
2354 3391 2.383601 GGGTATGGGTGGGGTGAGG 61.384 68.421 0.00 0.00 0.00 3.86
2355 3392 2.742116 CGGGTATGGGTGGGGTGAG 61.742 68.421 0.00 0.00 0.00 3.51
2356 3393 2.689402 CGGGTATGGGTGGGGTGA 60.689 66.667 0.00 0.00 0.00 4.02
2357 3394 4.499633 GCGGGTATGGGTGGGGTG 62.500 72.222 0.00 0.00 0.00 4.61
2359 3396 4.499633 GTGCGGGTATGGGTGGGG 62.500 72.222 0.00 0.00 0.00 4.96
2360 3397 4.499633 GGTGCGGGTATGGGTGGG 62.500 72.222 0.00 0.00 0.00 4.61
2361 3398 3.697439 CTGGTGCGGGTATGGGTGG 62.697 68.421 0.00 0.00 0.00 4.61
2362 3399 1.983119 ATCTGGTGCGGGTATGGGTG 61.983 60.000 0.00 0.00 0.00 4.61
2363 3400 1.692749 ATCTGGTGCGGGTATGGGT 60.693 57.895 0.00 0.00 0.00 4.51
2364 3401 1.071471 GATCTGGTGCGGGTATGGG 59.929 63.158 0.00 0.00 0.00 4.00
2365 3402 1.071471 GGATCTGGTGCGGGTATGG 59.929 63.158 0.00 0.00 0.00 2.74
2366 3403 0.532862 GTGGATCTGGTGCGGGTATG 60.533 60.000 0.00 0.00 0.00 2.39
2367 3404 0.691078 AGTGGATCTGGTGCGGGTAT 60.691 55.000 0.00 0.00 0.00 2.73
2368 3405 1.305802 AGTGGATCTGGTGCGGGTA 60.306 57.895 0.00 0.00 0.00 3.69
2369 3406 2.607750 AGTGGATCTGGTGCGGGT 60.608 61.111 0.00 0.00 0.00 5.28
2370 3407 2.124983 CAGTGGATCTGGTGCGGG 60.125 66.667 0.00 0.00 40.23 6.13
2371 3408 2.821366 GCAGTGGATCTGGTGCGG 60.821 66.667 0.00 0.00 43.78 5.69
2372 3409 2.046988 TGCAGTGGATCTGGTGCG 60.047 61.111 8.51 0.00 43.78 5.34
2373 3410 2.042831 GGTGCAGTGGATCTGGTGC 61.043 63.158 0.00 6.73 43.78 5.01
2374 3411 1.742880 CGGTGCAGTGGATCTGGTG 60.743 63.158 0.00 0.00 43.78 4.17
2375 3412 2.665000 CGGTGCAGTGGATCTGGT 59.335 61.111 0.00 0.00 43.78 4.00
2376 3413 2.821366 GCGGTGCAGTGGATCTGG 60.821 66.667 0.00 0.00 43.78 3.86
2377 3414 3.190849 CGCGGTGCAGTGGATCTG 61.191 66.667 0.00 0.00 46.12 2.90
2397 3434 3.087253 TATGGGTGGGAGGGTGCG 61.087 66.667 0.00 0.00 0.00 5.34
2398 3435 1.571773 AACTATGGGTGGGAGGGTGC 61.572 60.000 0.00 0.00 0.00 5.01
2399 3436 0.999712 AAACTATGGGTGGGAGGGTG 59.000 55.000 0.00 0.00 0.00 4.61
2400 3437 2.672703 TAAACTATGGGTGGGAGGGT 57.327 50.000 0.00 0.00 0.00 4.34
2401 3438 4.325084 TTTTAAACTATGGGTGGGAGGG 57.675 45.455 0.00 0.00 0.00 4.30
2420 3457 1.409427 TCGGTTGCCATTTCGGTTTTT 59.591 42.857 0.00 0.00 36.97 1.94
2421 3458 1.033574 TCGGTTGCCATTTCGGTTTT 58.966 45.000 0.00 0.00 36.97 2.43
2422 3459 1.033574 TTCGGTTGCCATTTCGGTTT 58.966 45.000 0.00 0.00 36.97 3.27
2423 3460 0.312729 GTTCGGTTGCCATTTCGGTT 59.687 50.000 0.00 0.00 36.97 4.44
2424 3461 1.520600 GGTTCGGTTGCCATTTCGGT 61.521 55.000 0.00 0.00 36.97 4.69
2425 3462 1.211709 GGTTCGGTTGCCATTTCGG 59.788 57.895 0.00 0.00 38.11 4.30
2426 3463 0.109781 CTGGTTCGGTTGCCATTTCG 60.110 55.000 0.00 0.00 33.84 3.46
2427 3464 0.958822 ACTGGTTCGGTTGCCATTTC 59.041 50.000 0.00 0.00 33.84 2.17
2428 3465 0.673437 CACTGGTTCGGTTGCCATTT 59.327 50.000 0.00 0.00 33.84 2.32
2429 3466 0.179004 TCACTGGTTCGGTTGCCATT 60.179 50.000 0.00 0.00 33.84 3.16
2430 3467 0.606401 CTCACTGGTTCGGTTGCCAT 60.606 55.000 0.00 0.00 33.84 4.40
2431 3468 1.227823 CTCACTGGTTCGGTTGCCA 60.228 57.895 0.00 0.00 0.00 4.92
2432 3469 1.966451 CCTCACTGGTTCGGTTGCC 60.966 63.158 0.00 0.00 0.00 4.52
2433 3470 2.617274 GCCTCACTGGTTCGGTTGC 61.617 63.158 0.00 0.00 38.35 4.17
2434 3471 0.320374 TAGCCTCACTGGTTCGGTTG 59.680 55.000 0.00 0.00 38.35 3.77
2435 3472 1.207329 GATAGCCTCACTGGTTCGGTT 59.793 52.381 0.00 0.00 38.35 4.44
2436 3473 0.824759 GATAGCCTCACTGGTTCGGT 59.175 55.000 0.00 0.00 38.35 4.69
2437 3474 0.249073 CGATAGCCTCACTGGTTCGG 60.249 60.000 0.00 0.00 38.35 4.30
2438 3475 0.249073 CCGATAGCCTCACTGGTTCG 60.249 60.000 0.00 0.00 38.35 3.95
2439 3476 0.824759 ACCGATAGCCTCACTGGTTC 59.175 55.000 0.00 0.00 38.35 3.62
2440 3477 0.824759 GACCGATAGCCTCACTGGTT 59.175 55.000 0.00 0.00 38.35 3.67
2441 3478 1.043673 GGACCGATAGCCTCACTGGT 61.044 60.000 0.00 0.00 38.35 4.00
2442 3479 1.043116 TGGACCGATAGCCTCACTGG 61.043 60.000 0.00 0.00 39.35 4.00
2443 3480 0.387202 CTGGACCGATAGCCTCACTG 59.613 60.000 0.00 0.00 0.00 3.66
2444 3481 0.757188 CCTGGACCGATAGCCTCACT 60.757 60.000 0.00 0.00 0.00 3.41
2445 3482 1.742768 CCTGGACCGATAGCCTCAC 59.257 63.158 0.00 0.00 0.00 3.51
2446 3483 1.457643 CCCTGGACCGATAGCCTCA 60.458 63.158 0.00 0.00 0.00 3.86
2447 3484 1.049289 AACCCTGGACCGATAGCCTC 61.049 60.000 0.00 0.00 0.00 4.70
2448 3485 0.620700 AAACCCTGGACCGATAGCCT 60.621 55.000 0.00 0.00 0.00 4.58
2449 3486 0.255033 AAAACCCTGGACCGATAGCC 59.745 55.000 0.00 0.00 0.00 3.93
2450 3487 2.169978 AGTAAAACCCTGGACCGATAGC 59.830 50.000 0.00 0.00 0.00 2.97
2451 3488 3.449737 TCAGTAAAACCCTGGACCGATAG 59.550 47.826 0.00 0.00 0.00 2.08
2452 3489 3.443052 TCAGTAAAACCCTGGACCGATA 58.557 45.455 0.00 0.00 0.00 2.92
2453 3490 2.262637 TCAGTAAAACCCTGGACCGAT 58.737 47.619 0.00 0.00 0.00 4.18
2454 3491 1.719529 TCAGTAAAACCCTGGACCGA 58.280 50.000 0.00 0.00 0.00 4.69
2455 3492 2.629051 GATCAGTAAAACCCTGGACCG 58.371 52.381 0.00 0.00 0.00 4.79
2456 3493 2.235402 TCGATCAGTAAAACCCTGGACC 59.765 50.000 0.00 0.00 0.00 4.46
2457 3494 3.604875 TCGATCAGTAAAACCCTGGAC 57.395 47.619 0.00 0.00 0.00 4.02
2458 3495 4.513442 CATTCGATCAGTAAAACCCTGGA 58.487 43.478 0.00 0.00 0.00 3.86
2459 3496 3.627577 CCATTCGATCAGTAAAACCCTGG 59.372 47.826 0.00 0.00 0.00 4.45
2460 3497 3.065371 GCCATTCGATCAGTAAAACCCTG 59.935 47.826 0.00 0.00 0.00 4.45
2461 3498 3.054361 AGCCATTCGATCAGTAAAACCCT 60.054 43.478 0.00 0.00 0.00 4.34
2462 3499 3.065371 CAGCCATTCGATCAGTAAAACCC 59.935 47.826 0.00 0.00 0.00 4.11
2463 3500 3.065371 CCAGCCATTCGATCAGTAAAACC 59.935 47.826 0.00 0.00 0.00 3.27
2464 3501 3.689649 ACCAGCCATTCGATCAGTAAAAC 59.310 43.478 0.00 0.00 0.00 2.43
2465 3502 3.950397 ACCAGCCATTCGATCAGTAAAA 58.050 40.909 0.00 0.00 0.00 1.52
2466 3503 3.627395 ACCAGCCATTCGATCAGTAAA 57.373 42.857 0.00 0.00 0.00 2.01
2467 3504 3.055458 TGAACCAGCCATTCGATCAGTAA 60.055 43.478 0.00 0.00 0.00 2.24
2468 3505 2.499693 TGAACCAGCCATTCGATCAGTA 59.500 45.455 0.00 0.00 0.00 2.74
2469 3506 1.278985 TGAACCAGCCATTCGATCAGT 59.721 47.619 0.00 0.00 0.00 3.41
2470 3507 2.028420 TGAACCAGCCATTCGATCAG 57.972 50.000 0.00 0.00 0.00 2.90
2471 3508 2.564771 GATGAACCAGCCATTCGATCA 58.435 47.619 0.00 0.00 0.00 2.92
2472 3509 1.528586 CGATGAACCAGCCATTCGATC 59.471 52.381 0.00 0.00 0.00 3.69
2473 3510 1.586422 CGATGAACCAGCCATTCGAT 58.414 50.000 0.00 0.00 0.00 3.59
2474 3511 0.461870 CCGATGAACCAGCCATTCGA 60.462 55.000 0.00 0.00 0.00 3.71
2475 3512 0.744414 ACCGATGAACCAGCCATTCG 60.744 55.000 0.00 0.00 0.00 3.34
2476 3513 1.401905 GAACCGATGAACCAGCCATTC 59.598 52.381 0.00 0.00 0.00 2.67
2477 3514 1.271871 TGAACCGATGAACCAGCCATT 60.272 47.619 0.00 0.00 0.00 3.16
2478 3515 0.327924 TGAACCGATGAACCAGCCAT 59.672 50.000 0.00 0.00 0.00 4.40
2479 3516 0.327924 ATGAACCGATGAACCAGCCA 59.672 50.000 0.00 0.00 0.00 4.75
2480 3517 1.463674 AATGAACCGATGAACCAGCC 58.536 50.000 0.00 0.00 0.00 4.85
2481 3518 4.335315 TCATAAATGAACCGATGAACCAGC 59.665 41.667 0.00 0.00 33.08 4.85
2482 3519 5.353956 TGTCATAAATGAACCGATGAACCAG 59.646 40.000 0.00 0.00 38.75 4.00
2483 3520 5.249420 TGTCATAAATGAACCGATGAACCA 58.751 37.500 0.00 0.00 38.75 3.67
2484 3521 5.811399 TGTCATAAATGAACCGATGAACC 57.189 39.130 0.00 0.00 38.75 3.62
2485 3522 8.514136 TTTTTGTCATAAATGAACCGATGAAC 57.486 30.769 0.00 0.00 38.75 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.